Rh2DG054400

Ras-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
3930102 .. 3930891
790 bp
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UTR
Exon/CDS
Intron
Rh2DG054400.1

Sequence Viewer

Length: 177 bp
ATGTTCTTAGCTGGAAACAAGGCTGACTTGGAAGAGAAGAGAAAAGTAGGGTCTGAGGTTTGTGATCTATTTCAAGGACCCTGGTTCAACAAGATGGAAACGAACCGAACTGTTTGTGGCGCATTGATGCATCAGTATGATGATGAAGACCCATCTGGAAACTTGTTACGTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

58

Amino Acids

6.62

Weight (kDa)

4.87

Isoelectric Point (pI)

52.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 74, 88
AjnI CCWGG 1 cut(s) 80
AluBI AGCT 1 cut(s) 11
AluI AGCT 1 cut(s) 11
AspLEI GCGC 1 cut(s) 122
AspS9I GGNCC 1 cut(s) 77
AvaII GGWCC 1 cut(s) 77
BbsI GAAGAC 1 cut(s) 153
BccI CCATC 2 cut(s) 88, 160
BciT130I CCWGG 1 cut(s) 82
Bme1390I CCNGG 1 cut(s) 82
Bme18I GGWCC 1 cut(s) 77
BmgT120I GGNCC 1 cut(s) 77
BmiI GGNNCC 1 cut(s) 79
BmrFI CCNGG 1 cut(s) 82
BmsI GCATC 2 cut(s) 117, 139
BpiI GAAGAC 1 cut(s) 153
BsaAI YACGTR 1 cut(s) 170
BsaJI CCNNGG 1 cut(s) 80
BseBI CCWGG 1 cut(s) 82
BseDI CCNNGG 1 cut(s) 80
BseMII CTCAG 1 cut(s) 45
Bsp143I GATC 1 cut(s) 64
BspCNI CTCAG 1 cut(s) 46
BspLI GGNNCC 1 cut(s) 79
BssECI CCNNGG 1 cut(s) 80
BssMI GATC 1 cut(s) 64
Bst2UI CCWGG 1 cut(s) 82
Bst4CI ACNGT 1 cut(s) 112
Bst6I CTCTTC 2 cut(s) 27, 32
BstBAI YACGTR 1 cut(s) 170
BstDEI CTNAG 2 cut(s) 7, 54
BstHHI GCGC 1 cut(s) 122
BstKTI GATC 1 cut(s) 67
BstMBI GATC 1 cut(s) 64
BstNI CCWGG 1 cut(s) 82
BstSCI CCNGG 1 cut(s) 80
BstSNI TACGTA 1 cut(s) 170
BstV2I GAAGAC 1 cut(s) 153
CfoI GCGC 1 cut(s) 122
Cfr13I GGNCC 1 cut(s) 77
CviJI RGCY 2 cut(s) 11, 23
CviKI_1 RGCY 2 cut(s) 11, 23
DdeI CTNAG 2 cut(s) 7, 54
DpnI GATC 1 cut(s) 66
DpnII GATC 1 cut(s) 64
Eam1104I CTCTTC 2 cut(s) 27, 32
EarI CTCTTC 2 cut(s) 27, 32
Eco105I TACGTA 1 cut(s) 170
Eco47I GGWCC 1 cut(s) 77
EcoO109I RGGNCCY 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 80
EcoT22I ATGCAT 1 cut(s) 132
FaiI YATR 1 cut(s) 138
FalI AAGNNNNNCTT 2 cut(s) 11, 43
GlaI GCGC 1 cut(s) 121
HhaI GCGC 1 cut(s) 122
Hin6I GCGC 1 cut(s) 120
HinP1I GCGC 1 cut(s) 120
Hpy188I TCNGA 1 cut(s) 55
Hpy188III TCNNGA 1 cut(s) 156
HpyCH4III ACNGT 1 cut(s) 112
HpyCH4IV ACGT 1 cut(s) 169
HpyCH4V TGCA 1 cut(s) 130
HpyF3I CTNAG 2 cut(s) 7, 54
HpySE526I ACGT 1 cut(s) 169
HspAI GCGC 1 cut(s) 120
Kzo9I GATC 1 cut(s) 64
LpnPI CCDG 3 cut(s) 67, 94, 141
LweI GCATC 2 cut(s) 117, 139
MaeII ACGT 1 cut(s) 169
MaeIII GTNAC 1 cut(s) 165
MalI GATC 1 cut(s) 66
MboI GATC 1 cut(s) 64
MboII GAAGA 3 cut(s) 44, 49, 158
MnlI CCTC 1 cut(s) 49
Mph1103I ATGCAT 1 cut(s) 132
MslI CAYNNNNRTG 1 cut(s) 135
MspR9I CCNGG 1 cut(s) 82
MvaI CCWGG 1 cut(s) 82
NdeII GATC 1 cut(s) 64
NlaIV GGNNCC 1 cut(s) 79
NsiI ATGCAT 1 cut(s) 132
Ppu21I YACGTR 1 cut(s) 170
PpuMI RGGWCCY 1 cut(s) 77
Psp5II RGGWCCY 1 cut(s) 77
Psp6I CCWGG 1 cut(s) 80
PspGI CCWGG 1 cut(s) 80
PspN4I GGNNCC 1 cut(s) 79
PspPI GGNCC 1 cut(s) 77
PspPPI RGGWCCY 1 cut(s) 77
RseI CAYNNNNRTG 1 cut(s) 135
Sau3AI GATC 1 cut(s) 64
Sau96I GGNCC 1 cut(s) 77
ScrFI CCNGG 1 cut(s) 82
SetI ASST 3 cut(s) 13, 60, 172
SfaNI GCATC 2 cut(s) 117, 139
SgeI CNNG 8 cut(s) 24, 31, 40, 86, 93, 94, 103, 168
SinI GGWCC 1 cut(s) 77
SmiMI CAYNNNNRTG 1 cut(s) 135
SnaBI TACGTA 1 cut(s) 170
StyD4I CCNGG 1 cut(s) 80
TaaI ACNGT 1 cut(s) 112
TaiI ACGT 1 cut(s) 172
TspDTI ATGAA 1 cut(s) 159
VpaK11BI GGWCC 1 cut(s) 77
Zsp2I ATGCAT 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.