Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008013

Physical Location & Seq

Genomic Coordinates Reverse (-)

80350967 .. 80356666

Gene Structure 5700 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34922

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGTCAGGAGAGGAGTACAGCGATGAGACTCATCTGCTGAGATCCTCGAACGACATTAACAAAGACGAGAACGGCGCCGTTTCGCCGGAGGACGACAACGACGGCGACGGCGATGCCGACTTGGAAGCGCAGAGCCGGAAAAGTAGTATCAGTCCGAGCAGTAGAGTCGGTGCGTTTAAGGATCTGCTGCTGAAGCATTTGGACGGCGTCGGAGGGCTTTCCGGTCGCCGGAACAGTTTCAAGAGGCTCGATGGGAATTGGGATAGGGATAGGGGTAGGGAGAGTAATCGGAGAGAAAGCAGAGAGCGGCGATCGCCTGTAGATCAGCTGCGTCATAGTAGCAATCATGACCCGCCGGCCGGAATCGATGGGAACGATGAACTGGCCGATAGTGCTCCGCCGGAGTGGGCTTTGCTTCTCCTCGGTTGCATTCTCGGCCTCGCCACGGGTCTCTTTGTTGCCGCGTTTAACAAAGGAGTACATGTTATACACGAATGGGCCTGGGCTGGTACTCCAACTGAAGGTGCTGCATGGCTCCGTCTGCAGAGACTGGGCGATACTTGGCATCGAATACTTTTAGTACCCGTCACAGGTGGGGTTATTGTTGGCATGATGCATGGTTTACTTGAAATATTGGATCAAATAAGACAGTTAAGTTCCTCCCAAGGGAAAGGATTTGATTTACTAGCTGGAGTCTTTCCCACAATAAAGGCTGTCCAGGCAGCTATCACACTAGGTACTGGTTGTTCTTTAGGTCCTGAAGGCCCTAGTGTAGATATTGGAAAATCATGTGCCAATGGGTTCTCATTAATGATGGAAAACAACAGAGAAAGGAAGATTGCCCTCATTGCAGCAGGTGCTGCTGCTGGAATTTCTTCAGGATTTAATGCGGCAGTTGCTGGTTGTTTCTTTGCTATTGAAACGGTGCTAAGGCCACTTCGAGCAGAAAACTCTCCTCCTTTTACTACCGCAATGATTATATTGGCTTCTGTTATATCGTCCACAGTATCTAATGTTTTACTTGGGACGCAATCAGCCTTTACAGTGCCTGTTTACGATTTGAAATCAGCTGCTGAATTGCCCCTCTACCTTATATTGGGCATGCTATGTGGTGCTGTGAGTGTAGTCTTCAATCGCTTGGTTGCTTGGTTCACAAAGTTTTTTGATTATATCAAGGAAAGATTTGGCCTTCCTGCAGTTGCATGCCCTGCTTTAGGTGGTTTAGGAGCTGGGTTGATTGCTCTCAAGTATCCAGGAATTCTGTACTGGGGTTTCACAAATGTTGAAGAAATCCTGCATACTGGAAAGACTGCTTCCGCCCCTGGAATCTGGCTGTTAACTCAATTATCAGCAGCCAAAGTTGTAGCAACAGCTTTATGCAAGGGTTCTGGGCTTGTAGGTGGACTTTATGCACCAAGCTTGATGATTGGGGCTGCTGTTGGTGCTGTATTTGGGGGTTCAGCTGCAGAATTGATTAATTCAGCAATTCCAGGAAATGCTGCCGTTGCTCAGCCACAAGCATATGCACTGGTGGGAATGGCTGCTATGCTGGCTTCAGTTTGTTCGGTGCCATTGACGTCAGTTCTCCTTCTGTTTGAGCTGACAAAAGATTACCGAATATTGCTTCCTCTCATGGGGGCTGTTGGATTGGCAATTTGGGTTCCCTCTGTGGTAAACCAGGGAAAGGAGACTGAAGCATCTGATACACGGAATTCTGCGAGAGGTTACTCTTCTGTTTCAGCTGCTGAAGAGAAAGATGAAGTTATTTGGAGACAACATGATAATGGAGATGATATGGAATTGTCTACTATGGGGAATACTTCTGATTCTGAATTAACTGAAGAAATGCTTCTGGAGAATCTAAAGGTTTCGCGGGCCATGTCAAAGAATTATGTGAAGGTTTCTCTGACCGTAACTATTGAAGAGGCAATAAAATCCATGCATGACAAGCATCAGAATTGTGTGTTAATTGTTGATGATGAAGATTTTCTGGAGGGAATATTGACATATGGTGATGTTAGACGGTATCAATCAAGGAAGTCTTCTGATACGTTGAAGATCGATTCTAGTTTTCTGGATGAAAACACCTGTCTTGTTTCCTCTGTATGTACTCGAGAAATCAGCTTTCATGGGCGAACCCGAGGTCTATTAACCTGTTATCCGGACACAGGTTTATTAATGGCCAAGGAGCTAATGGAGGCAAAAGATATCAAGCAGTTGCCTGTGGTTAAGCGTGGCAGACAACCACCAAAAGAAACGAGGCGAAGACTTGTTGCTATTCTTCATTACGATTCAATCTTGATGTGTCTCAGGGAGGAGATAAATCACAGGAAATCAATTCATCAACATAGAAAAGAGAATCTTGACGAAATAACAAATGGCCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0009507 GO:0009536 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS Voltage_CLC

Protein Analysis

795

Amino Acids

85.8

Weight (kDa)

5.78

Isoelectric Point (pI)

42.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Voltage_CLC	PF00654	224 - 554	1.1e-70	Voltage gated chloride channel
CBS	PF00571	623 - 677	1.4e-08	CBS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008013)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55620 AT1G55620
fragaria_vesca	FvH4_3g41470 FvH4_3g41470 FvH4_3g41470 FvH4_3g41470 FvH4_3g41470 FvH4_3g41470 FvH4_3g41470
malus_domestica	MD03G1044300.v1.1 MD11G1047300.v1.1
prunus_persica	Prupe.6G036200_v2.0.a1
pyrus_communis	pycom03g03420 pycom11g03830
rosa_chinensis	RchiOBHm_Chr5g0074431
rosa_laevigata	RLG00000036476
rosa_multiflora	Rmu_sc0000573.1_g000001 Rmu_sc0025084.1_g000002
rosa_roxburghii	Rroxscaffold_1G00007090
rosa_rugosa	Rorug05G0431800
rosa_samantha	Rh5BG509800 Rh5CG533600 Rh5DG522700
rosa_wichuraiana	Rw5G045340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	845
AatII	GACGTC	1 cut(s)	1580
Acc36I	ACCTGC	1 cut(s)	845
AccB1I	GGYRCC	2 cut(s)	74, 1567
AccBSI	CCGCTC	1 cut(s)	307
AccI	GTMKAC	1 cut(s)	1805
AccII	CGCG	2 cut(s)	464, 1873
AccIII	TCCGGA	1 cut(s)	2161
AciI	CCGC	8 cut(s)	307, 353, 398, 462, 890, 969, 1317, 1873
AclWI	GGATC	3 cut(s)	36, 189, 645
AcoI	YGGCCR	4 cut(s)	357, 384, 2181, 2380
AcsI	RAATTY	3 cut(s)	870, 1257, 1711
AcuI	CTGAAG	8 cut(s)	212, 540, 780, 861, 1539, 1713, 1767, 1860
AcyI	GRCGYC	3 cut(s)	75, 207, 1577
AfaI	GTAC	7 cut(s)	17, 480, 511, 582, 739, 1265, 2110
AflIII	ACRYGT	1 cut(s)	481
AgsI	TTSAA	9 cut(s)	241, 629, 920, 1063, 1132, 1286, 1922, 2056, 2295
AjnI	CCWGG	6 cut(s)	500, 717, 1252, 1321, 1489, 1677
Alw21I	GWGCWC	1 cut(s)	397
Alw26I	GTCTC	6 cut(s)	20, 455, 541, 1682, 1765, 2312
AlwI	GGATC	3 cut(s)	36, 189, 645
AlwNI	CAGNNNCTG	6 cut(s)	550, 860, 899, 1049, 1073, 1745
Ama87I	CYCGRG	2 cut(s)	2112, 2139
Aor13HI	TCCGGA	1 cut(s)	2161
ApoI	RAATTY	3 cut(s)	870, 1257, 1711
ArsI	GACNNNNNNTTYG	2 cut(s)	2128, 2160
AseI	ATTAAT	3 cut(s)	809, 1476, 2177
AsiSI	GCGATCGC	1 cut(s)	314
Asp700I	GAANNNNTTC	4 cut(s)	236, 874, 1848, 1986
AspLEI	GCGC	2 cut(s)	77, 130
AspS9I	GGNCC	4 cut(s)	498, 755, 764, 1875
AsuHPI	GGTGA	1 cut(s)	2024
AvaI	CYCGRG	2 cut(s)	2112, 2139
AvaII	GGWCC	1 cut(s)	755
BalI	TGGCCA	2 cut(s)	2183, 2382
BanI	GGYRCC	2 cut(s)	74, 1567
BbsI	GAAGAC	3 cut(s)	1120, 2034, 2272
Bbv12I	GWGCWC	1 cut(s)	397
BccI	CCATC	3 cut(s)	245, 362, 808
BceAI	ACGGC	6 cut(s)	62, 88, 118, 124, 220, 1487
BcgI	CGANNNNNNTGC	4 cut(s)	95, 129, 148, 182
BciT130I	CCWGG	6 cut(s)	502, 719, 1254, 1323, 1491, 1679
BciVI	GTATCC	1 cut(s)	1260
BcoDI	GTCTC	6 cut(s)	20, 455, 541, 1682, 1765, 2312
BfaI	CTAG	4 cut(s)	686, 734, 768, 2067
BfmI	CTRYAG	4 cut(s)	318, 542, 1194, 1464
BfoI	RGCGCY	1 cut(s)	78
BfuAI	ACCTGC	1 cut(s)	845
BfuI	GTATCC	1 cut(s)	1260
BlpI	GCTNAGC	1 cut(s)	1509
Bme1390I	CCNGG	6 cut(s)	502, 719, 1254, 1323, 1491, 1679
Bme18I	GGWCC	1 cut(s)	755
BmeT110I	CYCGRG	2 cut(s)	2112, 2139
BmgT120I	GGNCC	4 cut(s)	498, 755, 764, 1875
BmiI	GGNNCC	4 cut(s)	76, 536, 1569, 1662
BmrFI	CCNGG	6 cut(s)	502, 719, 1254, 1323, 1491, 1679
BmrI	ACTGGG	2 cut(s)	560, 1276
BmsI	GCATC	5 cut(s)	103, 574, 603, 1706, 1960
BmuI	ACTGGG	2 cut(s)	560, 1276
BpiI	GAAGAC	3 cut(s)	1120, 2034, 2272
BpmI	CTGGAG	3 cut(s)	711, 1874, 2012
Bpu10I	CCTNAGC	1 cut(s)	929
Bpu1102I	GCTNAGC	1 cut(s)	1509
BpuEI	CTTGAG	1 cut(s)	1229
Bsa29I	ATCGAT	2 cut(s)	366, 2061
BsaHI	GRCGYC	3 cut(s)	75, 207, 1577
BsaI	GGTCTC	1 cut(s)	455
BsaJI	CCNNGG	8 cut(s)	421, 444, 501, 664, 1321, 1678, 2140, 2184
BsaWI	WCCGGW	2 cut(s)	221, 2161
BsaXI	ACNNNNNCTCC	2 cut(s)	468, 498
Bse118I	RCCGGY	1 cut(s)	355
Bse1I	ACTGG	6 cut(s)	387, 555, 745, 1271, 1306, 1533
Bse3DI	GCAATG	2 cut(s)	846, 978
BseAI	TCCGGA	1 cut(s)	2161
BseBI	CCWGG	6 cut(s)	502, 719, 1254, 1323, 1491, 1679
BseCI	ATCGAT	2 cut(s)	366, 2061
BseDI	CCNNGG	8 cut(s)	421, 444, 501, 664, 1321, 1678, 2140, 2184
BseGI	GGATG	1 cut(s)	2083
BseMI	GCAATG	2 cut(s)	846, 978
BseMII	CTCAG	3 cut(s)	29, 1523, 2323
BseNI	ACTGG	6 cut(s)	387, 555, 745, 1271, 1306, 1533
BseRI	GAGGAG	4 cut(s)	26, 410, 945, 2330
BseX3I	CGGCCG	1 cut(s)	357
BseYI	CCCAGC	1 cut(s)	1229
Bsh1236I	CGCG	2 cut(s)	464, 1873
Bsh1285I	CGRYCG	3 cut(s)	226, 314, 360
BshNI	GGYRCC	2 cut(s)	74, 1567
BshVI	ATCGAT	2 cut(s)	366, 2061
BsiEI	CGRYCG	3 cut(s)	226, 314, 360
BsiHKAI	GWGCWC	1 cut(s)	397
BsiHKCI	CYCGRG	2 cut(s)	2112, 2139
BsiSI	CCGG	8 cut(s)	86, 136, 222, 229, 356, 360, 401, 2162
BslFI	GGGAC	1 cut(s)	1039
BsmAI	GTCTC	6 cut(s)	20, 455, 541, 1682, 1765, 2312
BsmFI	GGGAC	1 cut(s)	1039
BsmI	GAATGC	1 cut(s)	429
Bso31I	GGTCTC	1 cut(s)	455
BsoBI	CYCGRG	2 cut(s)	2112, 2139
Bsp1286I	GDGCHC	1 cut(s)	397
Bsp13I	TCCGGA	1 cut(s)	2161
Bsp143I	GATC	6 cut(s)	41, 181, 311, 322, 637, 2058
Bsp1720I	GCTNAGC	1 cut(s)	1509
BspACI	CCGC	8 cut(s)	307, 353, 398, 462, 890, 969, 1317, 1873
BspCNI	CTCAG	3 cut(s)	30, 1522, 2322
BspDI	ATCGAT	2 cut(s)	366, 2061
BspEI	TCCGGA	1 cut(s)	2161
BspFNI	CGCG	2 cut(s)	464, 1873
BspHI	TCATGA	1 cut(s)	346
BspLI	GGNNCC	4 cut(s)	76, 536, 1569, 1662
BspMAI	CTGCAG	3 cut(s)	546, 1198, 1468
BspMI	ACCTGC	1 cut(s)	845
BspPI	GGATC	3 cut(s)	36, 189, 645
BspT107I	GGYRCC	2 cut(s)	74, 1567
BspTNI	GGTCTC	1 cut(s)	455
BsrBI	CCGCTC	1 cut(s)	307
BsrDI	GCAATG	2 cut(s)	846, 978
BsrFI	RCCGGY	1 cut(s)	355
BsrI	ACTGG	6 cut(s)	387, 555, 745, 1271, 1306, 1533
BssAI	RCCGGY	1 cut(s)	355
BssECI	CCNNGG	8 cut(s)	421, 444, 501, 664, 1321, 1678, 2140, 2184
BssMI	GATC	6 cut(s)	41, 181, 311, 322, 637, 2058
BssNI	GRCGYC	3 cut(s)	75, 207, 1577
BssT1I	CCWWGG	2 cut(s)	664, 2184
Bst2UI	CCWGG	6 cut(s)	502, 719, 1254, 1323, 1491, 1679
Bst4CI	ACNGT	7 cut(s)	236, 651, 925, 1006, 1045, 1912, 2025
Bst6I	CTCTTC	3 cut(s)	1735, 1743, 1917
BstACI	GRCGYC	3 cut(s)	75, 207, 1577
BstAPI	GCANNNNNTGC	3 cut(s)	857, 860, 1208
BstC8I	GCNNGC	5 cut(s)	357, 1103, 1204, 1551, 1875
BstDEI	CTNAG	4 cut(s)	38, 929, 1509, 2309
BstDSI	CCRYGG	1 cut(s)	444
BstENI	CCTNNNNNAGG	1 cut(s)	1212
BstF5I	GGATG	1 cut(s)	2083
BstFNI	CGCG	2 cut(s)	464, 1873
BstH2I	RGCGCY	1 cut(s)	78
BstHHI	GCGC	2 cut(s)	77, 130
BstKTI	GATC	6 cut(s)	44, 184, 314, 325, 640, 2061
BstMAI	GTCTC	6 cut(s)	20, 455, 541, 1682, 1765, 2312
BstMBI	GATC	6 cut(s)	41, 181, 311, 322, 637, 2058
BstMCI	CGRYCG	3 cut(s)	226, 314, 360
BstNI	CCWGG	6 cut(s)	502, 719, 1254, 1323, 1491, 1679
BstNSI	RCATGY	3 cut(s)	485, 1105, 1206
BstSCI	CCNGG	6 cut(s)	500, 717, 1252, 1321, 1489, 1677
BstSFI	CTRYAG	4 cut(s)	318, 542, 1194, 1464
BstUI	CGCG	2 cut(s)	464, 1873
BstV2I	GAAGAC	3 cut(s)	1120, 2034, 2272
BstX2I	RGATCY	2 cut(s)	41, 181
BstYI	RGATCY	2 cut(s)	41, 181
BstZI	CGGCCG	1 cut(s)	357
Bsu15I	ATCGAT	2 cut(s)	366, 2061
BsuI	GTATCC	1 cut(s)	1260
BsuTUI	ATCGAT	2 cut(s)	366, 2061
BtgI	CCRYGG	1 cut(s)	444
BtgZI	GCGATG	2 cut(s)	36, 126
BtsCI	GGATG	1 cut(s)	2083
BtsIMutI	CAGTG	2 cut(s)	1050, 1526
BveI	ACCTGC	1 cut(s)	845
Cac8I	GCNNGC	5 cut(s)	357, 1103, 1204, 1551, 1875
CaiI	CAGNNNCTG	6 cut(s)	550, 860, 899, 1049, 1073, 1745
CciI	TCATGA	1 cut(s)	346
CfoI	GCGC	2 cut(s)	77, 130
Cfr10I	RCCGGY	1 cut(s)	355
Cfr13I	GGNCC	4 cut(s)	498, 755, 764, 1875
ClaI	ATCGAT	2 cut(s)	366, 2061
CseI	GACGC	3 cut(s)	196, 320, 1036
Csp6I	GTAC	7 cut(s)	16, 479, 510, 581, 738, 1264, 2109
CviQI	GTAC	7 cut(s)	16, 479, 510, 581, 738, 1264, 2109
DdeI	CTNAG	4 cut(s)	38, 929, 1509, 2309
DinI	GGCGCC	1 cut(s)	76
DpnI	GATC	6 cut(s)	43, 183, 313, 324, 639, 2060
DpnII	GATC	6 cut(s)	41, 181, 311, 322, 637, 2058
EaeI	YGGCCR	4 cut(s)	357, 384, 2181, 2380
EagI	CGGCCG	1 cut(s)	357
Eam1104I	CTCTTC	3 cut(s)	1735, 1743, 1917
EarI	CTCTTC	3 cut(s)	1735, 1743, 1917
EciI	GGCGGA	2 cut(s)	387, 1306
EclXI	CGGCCG	1 cut(s)	357
Eco130I	CCWWGG	2 cut(s)	664, 2184
Eco31I	GGTCTC	1 cut(s)	455
Eco32I	GATATC	1 cut(s)	2209
Eco47I	GGWCC	1 cut(s)	755
Eco52I	CGGCCG	1 cut(s)	357
Eco57I	CTGAAG	8 cut(s)	212, 540, 780, 861, 1539, 1713, 1767, 1860
Eco88I	CYCGRG	2 cut(s)	2112, 2139
EcoNI	CCTNNNNNAGG	1 cut(s)	1212
EcoO109I	RGGNCCY	2 cut(s)	755, 764
EcoRI	GAATTC	2 cut(s)	1257, 1711
EcoRII	CCWGG	6 cut(s)	500, 717, 1252, 1321, 1489, 1677
EcoRV	GATATC	1 cut(s)	2209
EcoT14I	CCWWGG	2 cut(s)	664, 2184
EcoT22I	ATGCAT	2 cut(s)	618, 1944
EgeI	GGCGCC	1 cut(s)	76
EheI	GGCGCC	1 cut(s)	76
ErhI	CCWWGG	2 cut(s)	664, 2184
FalI	AAGNNNNNCTT	6 cut(s)	1833, 1865, 2026, 2058, 2346, 2378
FaqI	GGGAC	1 cut(s)	1039
FauI	CCCGC	2 cut(s)	360, 1866
FauNDI	CATATG	2 cut(s)	1522, 2008
FblI	GTMKAC	1 cut(s)	1805
FokI	GGATG	1 cut(s)	2090
FspBI	CTAG	4 cut(s)	686, 734, 768, 2067
GlaI	GCGC	2 cut(s)	76, 129
GsaI	CCCAGC	1 cut(s)	1233
GsuI	CTGGAG	3 cut(s)	711, 1874, 2012
HaeII	RGCGCY	1 cut(s)	78
HapII	CCGG	8 cut(s)	86, 136, 222, 229, 356, 360, 401, 2162
HgaI	GACGC	3 cut(s)	196, 320, 1036
HhaI	GCGC	2 cut(s)	77, 130
Hin1I	GRCGYC	3 cut(s)	75, 207, 1577
Hin6I	GCGC	2 cut(s)	75, 128
HinP1I	GCGC	2 cut(s)	75, 128
HincII	GTYRAC	1 cut(s)	1338
HindII	GTYRAC	1 cut(s)	1338
HindIII	AAGCTT	1 cut(s)	1417
HpaI	GTTAAC	1 cut(s)	1338
HpaII	CCGG	8 cut(s)	86, 136, 222, 229, 356, 360, 401, 2162
HphI	GGTGA	1 cut(s)	2024
Hpy166II	GTNNAC	8 cut(s)	623, 1002, 1054, 1152, 1338, 1403, 1675, 1806
Hpy188I	TCNGA	9 cut(s)	156, 212, 291, 1702, 1825, 1831, 1908, 1956, 2047
Hpy8I	GTNNAC	8 cut(s)	623, 1002, 1054, 1152, 1338, 1403, 1675, 1806
Hpy99I	CGWCG	3 cut(s)	104, 110, 212
HpyAV	CCTTC	5 cut(s)	515, 755, 1199, 1598, 1891
HpyCH4III	ACNGT	7 cut(s)	236, 651, 925, 1006, 1045, 1912, 2025
HpyCH4IV	ACGT	2 cut(s)	1577, 2051
HpyF3I	CTNAG	4 cut(s)	38, 929, 1509, 2309
HpySE526I	ACGT	2 cut(s)	1577, 2051
Hsp92I	GRCGYC	3 cut(s)	75, 207, 1577
HspAI	GCGC	2 cut(s)	75, 128
KasI	GGCGCC	1 cut(s)	74
Kpn2I	TCCGGA	1 cut(s)	2161
KroI	GCCGGC	1 cut(s)	355
KroNI	GCCGGC	1 cut(s)	357
KspAI	GTTAAC	1 cut(s)	1338
Kzo9I	GATC	6 cut(s)	41, 181, 311, 322, 637, 2058
LmnI	GCTCC	4 cut(s)	400, 540, 1226, 2188
LweI	GCATC	5 cut(s)	103, 574, 603, 1706, 1960
MaeI	CTAG	4 cut(s)	686, 734, 768, 2067
MaeII	ACGT	2 cut(s)	1577, 2051
MaeIII	GTNAC	3 cut(s)	586, 1724, 1912
MalI	GATC	6 cut(s)	43, 183, 313, 324, 639, 2060
MbiI	CCGCTC	1 cut(s)	307
MboI	GATC	6 cut(s)	41, 181, 311, 322, 637, 2058
MflI	RGATCY	2 cut(s)	41, 181
MhlI	GDGCHC	1 cut(s)	397
MlsI	TGGCCA	2 cut(s)	2183, 2382
MluNI	TGGCCA	2 cut(s)	2183, 2382
Mly113I	GGCGCC	1 cut(s)	75
MlyI	GAGTC	3 cut(s)	22, 174, 702
MmeI	TCCRAC	3 cut(s)	190, 539, 1624
Mox20I	TGGCCA	2 cut(s)	2183, 2382
Mph1103I	ATGCAT	2 cut(s)	618, 1944
MroI	TCCGGA	1 cut(s)	2161
MroNI	GCCGGC	1 cut(s)	355
MroXI	GAANNNNTTC	4 cut(s)	236, 874, 1848, 1986
MscI	TGGCCA	2 cut(s)	2183, 2382
MslI	CAYNNNNRTG	1 cut(s)	1782
Msp20I	TGGCCA	2 cut(s)	2183, 2382
MspA1I	CMGCKG	4 cut(s)	328, 1070, 1463, 1742
MspI	CCGG	8 cut(s)	86, 136, 222, 229, 356, 360, 401, 2162
MspR9I	CCNGG	6 cut(s)	502, 719, 1254, 1323, 1491, 1679
Mva1269I	GAATGC	1 cut(s)	429
MvaI	CCWGG	6 cut(s)	502, 719, 1254, 1323, 1491, 1679
MvnI	CGCG	2 cut(s)	464, 1873
NaeI	GCCGGC	1 cut(s)	357
NarI	GGCGCC	1 cut(s)	75
NdeI	CATATG	2 cut(s)	1522, 2008
NdeII	GATC	6 cut(s)	41, 181, 311, 322, 637, 2058
NgoMIV	GCCGGC	1 cut(s)	355
NlaIV	GGNNCC	4 cut(s)	76, 536, 1569, 1662
NmeAIII	GCCGAG	1 cut(s)	414
NmuCI	GTSAC	1 cut(s)	586
NsiI	ATGCAT	2 cut(s)	618, 1944
NspI	RCATGY	3 cut(s)	485, 1105, 1206
PaeI	GCATGC	2 cut(s)	1105, 1206
PaeR7I	CTCGAG	1 cut(s)	2112
PagI	TCATGA	1 cut(s)	346
PaqCI	CACCTGC	1 cut(s)	845
PciI	ACATGT	1 cut(s)	481
PcsI	WCGNNNNNNNCGW	3 cut(s)	108, 114, 372
PctI	GAATGC	1 cut(s)	429
PdiI	GCCGGC	1 cut(s)	357
PdmI	GAANNNNTTC	4 cut(s)	236, 874, 1848, 1986
PfeI	GAWTC	7 cut(s)	363, 1326, 1826, 1858, 2063, 2291, 2359
PflFI	GACNNNGTC	1 cut(s)	206
PfoI	TCCNGGA	2 cut(s)	1252, 1489
Ple19I	CGATCG	1 cut(s)	314
PleI	GAGTC	3 cut(s)	22, 173, 701
PluTI	GGCGCC	1 cut(s)	78
PpsI	GAGTC	3 cut(s)	22, 173, 701
PpuMI	RGGWCCY	1 cut(s)	755
PscI	ACATGT	1 cut(s)	481
PshBI	ATTAAT	3 cut(s)	809, 1476, 2177
Psp5II	RGGWCCY	1 cut(s)	755
Psp6I	CCWGG	6 cut(s)	500, 717, 1252, 1321, 1489, 1677
PspFI	CCCAGC	1 cut(s)	1229
PspGI	CCWGG	6 cut(s)	500, 717, 1252, 1321, 1489, 1677
PspN4I	GGNNCC	4 cut(s)	76, 536, 1569, 1662
PspPI	GGNCC	4 cut(s)	498, 755, 764, 1875
PspPPI	RGGWCCY	1 cut(s)	755
PsrI	GAACNNNNNNTAC	2 cut(s)	730, 762
PstI	CTGCAG	3 cut(s)	546, 1198, 1468
PstNI	CAGNNNCTG	6 cut(s)	550, 860, 899, 1049, 1073, 1745
PsuI	RGATCY	2 cut(s)	41, 181
PsyI	GACNNNGTC	1 cut(s)	206
PvuI	CGATCG	1 cut(s)	314
PvuII	CAGCTG	4 cut(s)	328, 1070, 1463, 1742
RgaI	GCGATCGC	1 cut(s)	314
RsaI	GTAC	7 cut(s)	17, 480, 511, 582, 739, 1265, 2110
RsaNI	GTAC	7 cut(s)	16, 479, 510, 581, 738, 1264, 2109
RseI	CAYNNNNRTG	1 cut(s)	1782
Sau3AI	GATC	6 cut(s)	41, 181, 311, 322, 637, 2058
Sau96I	GGNCC	4 cut(s)	498, 755, 764, 1875
SchI	GAGTC	3 cut(s)	22, 174, 702
ScrFI	CCNGG	6 cut(s)	502, 719, 1254, 1323, 1491, 1679
SduI	GDGCHC	1 cut(s)	397
SfaAI	GCGATCGC	1 cut(s)	314
SfaNI	GCATC	5 cut(s)	103, 574, 603, 1706, 1960
SfcI	CTRYAG	4 cut(s)	318, 542, 1194, 1464
SfoI	GGCGCC	1 cut(s)	76
Sfr274I	CTCGAG	1 cut(s)	2112
SgfI	GCGATCGC	1 cut(s)	314
SinI	GGWCC	1 cut(s)	755
SlaI	CTCGAG	1 cut(s)	2112
SmiMI	CAYNNNNRTG	1 cut(s)	1782
SmlI	CTYRAG	2 cut(s)	1244, 2112
SmoI	CTYRAG	2 cut(s)	1244, 2112
SphI	GCATGC	2 cut(s)	1105, 1206
SsiI	CCGC	8 cut(s)	307, 353, 398, 462, 890, 969, 1317, 1873
SspDI	GGCGCC	1 cut(s)	74
SspI	AATATT	3 cut(s)	633, 1620, 2001
SspMI	CTAG	4 cut(s)	686, 734, 768, 2067
StyD4I	CCNGG	6 cut(s)	500, 717, 1252, 1321, 1489, 1677
StyI	CCWWGG	2 cut(s)	664, 2184
TaaI	ACNGT	7 cut(s)	236, 651, 925, 1006, 1045, 1912, 2025
TaiI	ACGT	2 cut(s)	1580, 2054
TaqI	TCGA	7 cut(s)	47, 249, 366, 568, 940, 2061, 2113
TatI	WGTACW	4 cut(s)	15, 478, 1263, 2108
TauI	GCSGC	3 cut(s)	310, 464, 893
TfiI	GAWTC	7 cut(s)	363, 1326, 1826, 1858, 2063, 2291, 2359
TscAI	CASTG	2 cut(s)	1050, 1533
TseFI	GTSAC	1 cut(s)	586
Tsp45I	GTSAC	1 cut(s)	586
TspDTI	ATGAA	7 cut(s)	393, 1773, 1995, 2094, 2117, 2273, 2330
TspGWI	ACGGA	2 cut(s)	527, 1723
TspRI	CASTG	2 cut(s)	1050, 1533
Tth111I	GACNNNGTC	1 cut(s)	206
VpaK11BI	GGWCC	1 cut(s)	755
VspI	ATTAAT	3 cut(s)	809, 1476, 2177
XagI	CCTNNNNNAGG	1 cut(s)	1212
XapI	RAATTY	3 cut(s)	870, 1257, 1711
XceI	RCATGY	3 cut(s)	485, 1105, 1206
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2191
XhoI	CTCGAG	1 cut(s)	2112
XmiI	GTMKAC	1 cut(s)	1805
XmnI	GAANNNNTTC	4 cut(s)	236, 874, 1848, 1986
XspI	CTAG	4 cut(s)	686, 734, 768, 2067
ZraI	GACGTC	1 cut(s)	1578
Zsp2I	ATGCAT	2 cut(s)	618, 1944

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.