Rorug05G0431800

FH protein interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000859
Physical Location & Seq
Reverse (-)
60006688 .. 60010563
3876 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0431800.1

Sequence Viewer

Length: 2169 bp
ATGGCCAGTACCAGCAGAGTACCCCGCGACGACGACGACGACGACGACTTCATGGACATCGATACGCTCGACTACGACGCCGAAATCGCCTTCAACCTCCAACTCGAAGAAGCCATAACCGCCTCCCTCGCCCCTCAACCACCCTCCTCCGCCGCCCGAAACGACGCCGCGTCGGTACTCGTCCGACTGGAGCAGGCGCTCAAAGACCGCGTGCAGAGCGAGGTCGAACTGCGGCGGCCGAGGGACGATCTCGCGCGTGTGATTCACGACGCCAAGGTCGCGAGGGAGATCACTGACATTCCCGACGACGAGTGGGAACGGTCCGGCGGCGACTTCGCCAAGCCCTTCGACGGAGGCTCGTCGTCGGCGGCGGCAAGTGTGGAGAGCGAGGAGGGCGAGTTCAGGCTCTATTTCAAGGGTTTGGTGAGCGAGGAACAGGTTGGGGATCGGAAATTGGTGCTGGCCGGGATCGGAGTAGCAATATGCGACCCCAGGGATAATCTGGTCTTCGAGGTTAAGAAACCGCTGATTGGGAATGGGCTTAGTAGAAATTCGGCCCAATTGAAGGCCTTGATCGAAGGGCTCACTGCTGCTATGTCTTTGGGGCTGAAGCGAATCACCTTCTTCTGCGATAACAATCCAATCATTCAGTTTGTTAATGGGAAATGGCCAGCAAAGCAGCGCAAGATAGTAAATCTTGTTAATCAGGTTAAGAGCCTTCGAAGCAAGTTTACACAGTGCAACTCCAGGCTTGTGCCTCGGTTGGAAATTAAGTTTGCATTTAAACTTGCAAGAGATGCCATAGAGTCTCAGTCTCTGTCTCAGATGAAGCCTGCAGAATCTACCACTCACAAGAATGTGAAAGAGACTTGCGTGATTTGTATGGAAGATAGTGATGTTAGTCAGATGTTTTCAGTTGATGGCTGCCTACATCGATATTGCTATTCTTGTCTGAAACAGCATGTGGAGGTGAAGTTGCTTCATGGGATCCTTCCTAAATGCCCTCATGAAGACTGTAAGTCTGACCTTAGTGTCGACAGTTGTGCGAAATTCTTGACACCTAAACATGTTGACACTATGCGTCAACGTATAAAGGAAGCTTCAATTCCTGCAACTGAGAGAGTTTATTGCCCATATCCAAGGTGCTCTCTCTTAATGTCAAAAAGCGAGGTTTTACAACATGCTAAAAAAACCTTGATGGGGGCTGTGGAACAATCAGGACTTAGGAGATGCATGAAATGTCACTACCTTTTTTGCATCAATTGTAAAGTCCCTTGGCACAGAAACATCACATGCGCTGACTACAAAAAGTCGAATCCTAATCCTCCAGAAGAGGACACAAAGCTAAAGTTCCTTGCCTCTAGTAAGCTTTGGCGCCAATGTGTGAAGTGCAGCCATATGATTGAACTTCTTGAAGGTTGCTACCACATGACTTGCAGGTGTAATTATGAGTTCTGCTATAATTGTGGAGCTGAGTGGAAAGACAAGAAGGCAACATGTACATGCCCGCTGTGGATTGAGGATAATATTTTGCATGAGGATGATGATTTTGATGGAGAGTCGGATTCTGAATCTGAAGTTGAATTTGTAAGTGAGCATGATGGATGCCCACTGTCAGATGAGGATAGCAGTTTGGATGCCCAAGTTGATAAATATTTTGAGGAGGAAGAAGATGAGGACTACAATGATGATGAATATCAAAGTGAAGATGAGGAGGAAAAAGAAGTTGGAGGTCATAAGTATGAAAACGATAGTGAAGATGAATATGAAAGTGAAAGCGGTGTAAGTGAGAAAGAGGTTCAGGAGAGACAGGTTCAAGAGCAATTTTTGGAGAAAGATATCGAGAATCATATCTTGTCTGATGAAGGTGAATATTATGAGCTGGAGGAAGAAGAAGATGACAACGACGGCGAGGACTTCAATAATAGTGAGTGTCAAAGTGAGGATGAGGAGGAAAATGAAGTTGGAGGTGATGAATATGAAAACGAAGGCATTGTAGTTGAGGATGAGGTGCAGGAGGGACAGATTCAAGAGGAGGTTTTGGACATGGATATGGAGGATCATAGCTCGTCCCATGACGATGATATATATTTTGATGAAGAGTATGAGGAAGATGAAGAGGAGAACTATTGTGACTTCGATAGTTGTGACTTTGACTCGGATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB_2 Pentapeptide

Protein Analysis

722

Amino Acids

82.5

Weight (kDa)

4.38

Isoelectric Point (pI)

57.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 154 - 267 5.7e-26 Reverse transcriptase-like
IBR PF01485 371 - 432 1.4e-10 IBR domain, a half RING-finger domain
IBR PF01485 450 - 500 2.2e-07 IBR domain, a half RING-finger domain
IBR_1 PF22191 460 - 497 2e-06 IBR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1428
AasI GACNNNNNNGTC 2 cut(s) 275, 1031
Acc36I ACCTGC 1 cut(s) 1428
AccB1I GGYRCC 1 cut(s) 1374
AccI GTMKAC 1 cut(s) 1035
AccII CGCG 6 cut(s) 27, 170, 210, 254, 256, 281
AclWI GGATC 5 cut(s) 453, 476, 982, 995, 2067
AcoI YGGCCR 4 cut(s) 3, 236, 462, 668
AcsI RAATTY 3 cut(s) 550, 1049, 1583
AcuI CTGAAG 2 cut(s) 629, 1596
AcyI GRCGYC 4 cut(s) 78, 165, 270, 1375
AfaI GTAC 4 cut(s) 10, 21, 177, 1501
AfiI CCNNNNNNNGG 4 cut(s) 350, 530, 565, 1200
AflIII ACRYGT 2 cut(s) 1066, 1496
AhdI GACNNNNNGTC 2 cut(s) 169, 1018
AjnI CCWGG 2 cut(s) 491, 746
AjuI GAANNNNNNNTTGG 4 cut(s) 1710, 1742, 1947, 1979
AloI GAACNNNNNNTCC 2 cut(s) 383, 415
AluBI AGCT 6 cut(s) 1100, 1345, 1369, 1472, 1882, 2067
AluI AGCT 6 cut(s) 1100, 1345, 1369, 1472, 1882, 2067
Alw21I GWGCWC 1 cut(s) 1148
Alw26I GTCTC 5 cut(s) 813, 819, 825, 860, 1801
AlwI GGATC 5 cut(s) 453, 476, 982, 995, 2067
AlwNI CAGNNNCTG 1 cut(s) 817
AoxI GGCC 6 cut(s) 3, 236, 462, 555, 567, 668
ApeKI GCWGC 4 cut(s) 590, 679, 924, 1392
ApoI RAATTY 3 cut(s) 550, 1049, 1583
AspLEI GCGC 5 cut(s) 199, 256, 684, 1298, 1377
AspS9I GGNCC 2 cut(s) 321, 556
AsuC2I CCSGG 1 cut(s) 466
AsuHPI GGTGA 5 cut(s) 436, 610, 982, 1880, 1982
AsuII TTCGAA 1 cut(s) 721
AvaII GGWCC 1 cut(s) 321
BalI TGGCCA 2 cut(s) 5, 670
BamHI GGATCC 1 cut(s) 987
BanI GGYRCC 1 cut(s) 1374
BanII GRGCYC 1 cut(s) 585
BarI GAAGNNNNNNTAC 2 cut(s) 715, 747
BbsI GAAGAC 2 cut(s) 499, 1017
Bbv12I GWGCWC 1 cut(s) 1148
BbvI GCAGC 4 cut(s) 577, 691, 911, 1404
BccI CCATC 4 cut(s) 914, 1192, 1547, 1595
BceAI ACGGC 1 cut(s) 1924
BcgI CGANNNNNNTGC 2 cut(s) 1025, 1059
BciT130I CCWGG 2 cut(s) 493, 748
BcnI CCSGG 1 cut(s) 466
BcoDI GTCTC 5 cut(s) 813, 819, 825, 860, 1801
BfaI CTAG 1 cut(s) 1362
BfmI CTRYAG 1 cut(s) 834
BfoI RGCGCY 2 cut(s) 200, 1378
BfuAI ACCTGC 1 cut(s) 1428
Bme1390I CCNGG 3 cut(s) 466, 493, 748
Bme18I GGWCC 1 cut(s) 321
BmeRI GACNNNNNGTC 2 cut(s) 169, 1018
BmgT120I GGNCC 2 cut(s) 321, 556
BmiI GGNNCC 2 cut(s) 989, 1376
BmrFI CCNGG 3 cut(s) 466, 493, 748
BmsI GCATC 5 cut(s) 787, 1220, 1266, 1595, 1627
BpiI GAAGAC 2 cut(s) 499, 1017
BpmI CTGGAG 4 cut(s) 209, 730, 1311, 1904
Bpu14I TTCGAA 1 cut(s) 721
BpuMI CCSGG 1 cut(s) 466
Bsa29I ATCGAT 2 cut(s) 60, 934
BsaBI GATNNNNATC 2 cut(s) 636, 1695
BsaHI GRCGYC 4 cut(s) 78, 165, 270, 1375
BsaJI CCNNGG 7 cut(s) 239, 273, 491, 492, 758, 1139, 1274
BsaXI ACNNNNNCTCC 4 cut(s) 383, 413, 959, 989
Bsc4I CCNNNNNNNGG 4 cut(s) 350, 530, 565, 1200
Bse1I ACTGG 2 cut(s) 6, 192
Bse8I GATNNNNATC 2 cut(s) 636, 1695
BseBI CCWGG 2 cut(s) 493, 748
BseCI ATCGAT 2 cut(s) 60, 934
BseDI CCNNGG 7 cut(s) 239, 273, 491, 492, 758, 1139, 1274
BseGI GGATG 5 cut(s) 1546, 1610, 1642, 1951, 2011
BseJI GATNNNNATC 2 cut(s) 636, 1695
BseLI CCNNNNNNNGG 4 cut(s) 350, 530, 565, 1200
BseMII CTCAG 4 cut(s) 824, 836, 1107, 1464
BseNI ACTGG 2 cut(s) 6, 192
BseRI GAGGAG 7 cut(s) 136, 404, 1676, 1727, 1964, 2048, 2135
BseX3I CGGCCG 1 cut(s) 236
BseXI GCAGC 4 cut(s) 577, 691, 911, 1404
BsgI GTGCAG 3 cut(s) 233, 1411, 2033
Bsh1236I CGCG 6 cut(s) 27, 170, 210, 254, 256, 281
Bsh1285I CGRYCG 1 cut(s) 239
BshFI GGCC 6 cut(s) 5, 238, 464, 557, 569, 670
BshNI GGYRCC 1 cut(s) 1374
BshVI ATCGAT 2 cut(s) 60, 934
BsiEI CGRYCG 1 cut(s) 239
BsiHKAI GWGCWC 1 cut(s) 1148
BsiSI CCGG 2 cut(s) 324, 465
BslFI GGGAC 4 cut(s) 257, 1256, 2034, 2056
BslI CCNNNNNNNGG 4 cut(s) 350, 530, 565, 1200
BsmAI GTCTC 5 cut(s) 813, 819, 825, 860, 1801
BsmFI GGGAC 4 cut(s) 257, 1256, 2034, 2056
BsnI GGCC 6 cut(s) 5, 238, 464, 557, 569, 670
Bsp119I TTCGAA 1 cut(s) 721
Bsp1286I GDGCHC 2 cut(s) 585, 1148
Bsp1407I TGTACA 1 cut(s) 1499
Bsp143I GATC 7 cut(s) 247, 288, 445, 468, 573, 987, 2059
Bsp68I TCGCGA 1 cut(s) 281
BspANI GGCC 6 cut(s) 5, 238, 464, 557, 569, 670
BspCNI CTCAG 4 cut(s) 823, 835, 1108, 1465
BspDI ATCGAT 2 cut(s) 60, 934
BspFNI CGCG 6 cut(s) 27, 170, 210, 254, 256, 281
BspHI TCATGA 1 cut(s) 1006
BspLI GGNNCC 2 cut(s) 989, 1376
BspMAI CTGCAG 1 cut(s) 838
BspMI ACCTGC 1 cut(s) 1428
BspPI GGATC 5 cut(s) 453, 476, 982, 995, 2067
BspT104I TTCGAA 1 cut(s) 721
BspT107I GGYRCC 1 cut(s) 1374
BsrGI TGTACA 1 cut(s) 1499
BsrI ACTGG 2 cut(s) 6, 192
BssECI CCNNGG 7 cut(s) 239, 273, 491, 492, 758, 1139, 1274
BssMI GATC 7 cut(s) 247, 288, 445, 468, 573, 987, 2059
BssNI GRCGYC 4 cut(s) 78, 165, 270, 1375
BssT1I CCWWGG 3 cut(s) 273, 1139, 1274
Bst2UI CCWGG 2 cut(s) 493, 748
Bst4CI ACNGT 5 cut(s) 321, 738, 1016, 1040, 1614
Bst6I CTCTTC 3 cut(s) 1326, 2094, 2112
BstACI GRCGYC 4 cut(s) 78, 165, 270, 1375
BstAPI GCANNNNNTGC 1 cut(s) 797
BstAUI TGTACA 1 cut(s) 1499
BstBI TTCGAA 1 cut(s) 721
BstC8I GCNNGC 6 cut(s) 195, 212, 462, 672, 834, 1508
BstDEI CTNAG 7 cut(s) 542, 810, 822, 1028, 1116, 1223, 1473
BstF5I GGATG 5 cut(s) 1546, 1610, 1642, 1951, 2011
BstFNI CGCG 6 cut(s) 27, 170, 210, 254, 256, 281
BstH2I RGCGCY 2 cut(s) 200, 1378
BstHHI GCGC 5 cut(s) 199, 256, 684, 1298, 1377
BstKTI GATC 7 cut(s) 250, 291, 448, 471, 576, 990, 2062
BstMAI GTCTC 5 cut(s) 813, 819, 825, 860, 1801
BstMBI GATC 7 cut(s) 247, 288, 445, 468, 573, 987, 2059
BstMCI CGRYCG 1 cut(s) 239
BstMWI GCNNNNNNNGC 9 cut(s) 86, 119, 128, 216, 278, 393, 676, 723, 797
BstNI CCWGG 2 cut(s) 493, 748
BstNSI RCATGY 6 cut(s) 965, 1070, 1184, 1296, 1500, 1506
BstSCI CCNGG 3 cut(s) 464, 491, 746
BstSFI CTRYAG 1 cut(s) 834
BstUI CGCG 6 cut(s) 27, 170, 210, 254, 256, 281
BstV1I GCAGC 4 cut(s) 577, 691, 911, 1404
BstV2I GAAGAC 2 cut(s) 499, 1017
BstX2I RGATCY 1 cut(s) 987
BstYI RGATCY 1 cut(s) 987
BstZI CGGCCG 1 cut(s) 236
Bsu15I ATCGAT 2 cut(s) 60, 934
BsuRI GGCC 6 cut(s) 5, 238, 464, 557, 569, 670
BsuTUI ATCGAT 2 cut(s) 60, 934
BtsCI GGATG 5 cut(s) 1546, 1610, 1642, 1951, 2011
BtsI GCAGTG 1 cut(s) 585
BtsIMutI CAGTG 4 cut(s) 291, 585, 743, 1610
BtuMI TCGCGA 1 cut(s) 281
BveI ACCTGC 1 cut(s) 1428
Cac8I GCNNGC 6 cut(s) 195, 212, 462, 672, 834, 1508
CaiI CAGNNNCTG 1 cut(s) 817
CciI TCATGA 1 cut(s) 1006
CfoI GCGC 5 cut(s) 199, 256, 684, 1298, 1377
Cfr13I GGNCC 2 cut(s) 321, 556
ClaI ATCGAT 2 cut(s) 60, 934
CpoI CGGWCCG 1 cut(s) 321
CseI GACGC 5 cut(s) 86, 159, 173, 278, 1070
Csp6I GTAC 4 cut(s) 9, 20, 176, 1500
CspCI CAANNNNNGTGG 2 cut(s) 1415, 1450
CspI CGGWCCG 1 cut(s) 321
CviQI GTAC 4 cut(s) 9, 20, 176, 1500
DdeI CTNAG 7 cut(s) 542, 810, 822, 1028, 1116, 1223, 1473
DinI GGCGCC 1 cut(s) 1376
DpnI GATC 7 cut(s) 249, 290, 447, 470, 575, 989, 2061
DpnII GATC 7 cut(s) 247, 288, 445, 468, 573, 987, 2059
DraI TTTAAA 1 cut(s) 784
DrdI GACNNNNNNGTC 2 cut(s) 275, 1031
DriI GACNNNNNGTC 2 cut(s) 169, 1018
DseDI GACNNNNNNGTC 2 cut(s) 275, 1031
EaeI YGGCCR 4 cut(s) 3, 236, 462, 668
EagI CGGCCG 1 cut(s) 236
Eam1104I CTCTTC 3 cut(s) 1326, 2094, 2112
Eam1105I GACNNNNNGTC 2 cut(s) 169, 1018
EarI CTCTTC 3 cut(s) 1326, 2094, 2112
EciI GGCGGA 1 cut(s) 139
EclXI CGGCCG 1 cut(s) 236
Eco130I CCWWGG 3 cut(s) 273, 1139, 1274
Eco147I AGGCCT 1 cut(s) 569
Eco24I GRGCYC 1 cut(s) 585
Eco32I GATATC 1 cut(s) 1840
Eco47I GGWCC 1 cut(s) 321
Eco52I CGGCCG 1 cut(s) 236
Eco57I CTGAAG 2 cut(s) 629, 1596
EcoRII CCWGG 2 cut(s) 491, 746
EcoRV GATATC 1 cut(s) 1840
EcoT14I CCWWGG 3 cut(s) 273, 1139, 1274
EcoT22I ATGCAT 1 cut(s) 1235
EcoT38I GRGCYC 1 cut(s) 585
EgeI GGCGCC 1 cut(s) 1376
EheI GGCGCC 1 cut(s) 1376
ErhI CCWWGG 3 cut(s) 273, 1139, 1274
FaqI GGGAC 4 cut(s) 257, 1256, 2034, 2056
FauI CCCGC 2 cut(s) 32, 1515
FauNDI CATATG 1 cut(s) 1398
FblI GTMKAC 1 cut(s) 1035
FokI GGATG 5 cut(s) 1553, 1617, 1649, 1958, 2018
FriOI GRGCYC 1 cut(s) 585
FspBI CTAG 1 cut(s) 1362
GlaI GCGC 5 cut(s) 198, 255, 683, 1297, 1376
GsuI CTGGAG 4 cut(s) 209, 730, 1311, 1904
HaeII RGCGCY 2 cut(s) 200, 1378
HaeIII GGCC 6 cut(s) 5, 238, 464, 557, 569, 670
HapII CCGG 2 cut(s) 324, 465
HgaI GACGC 5 cut(s) 86, 159, 173, 278, 1070
HhaI GCGC 5 cut(s) 199, 256, 684, 1298, 1377
Hin1I GRCGYC 4 cut(s) 78, 165, 270, 1375
Hin6I GCGC 5 cut(s) 197, 254, 682, 1296, 1375
HinP1I GCGC 5 cut(s) 197, 254, 682, 1296, 1375
HincII GTYRAC 3 cut(s) 1036, 1072, 1085
HindII GTYRAC 3 cut(s) 1036, 1072, 1085
HindIII AAGCTT 2 cut(s) 1098, 1367
HpaII CCGG 2 cut(s) 324, 465
HphI GGTGA 5 cut(s) 436, 610, 982, 1880, 1982
Hpy166II GTNNAC 4 cut(s) 732, 1036, 1072, 1085
Hpy8I GTNNAC 4 cut(s) 732, 1036, 1072, 1085
HpyCH4III ACNGT 5 cut(s) 321, 738, 1016, 1040, 1614
HpyCH4IV ACGT 1 cut(s) 1087
HpyF10VI GCNNNNNNNGC 9 cut(s) 86, 119, 128, 216, 278, 393, 676, 723, 797
HpyF3I CTNAG 7 cut(s) 542, 810, 822, 1028, 1116, 1223, 1473
HpySE526I ACGT 1 cut(s) 1087
Hsp92I GRCGYC 4 cut(s) 78, 165, 270, 1375
HspAI GCGC 5 cut(s) 197, 254, 682, 1296, 1375
KasI GGCGCC 1 cut(s) 1374
Kzo9I GATC 7 cut(s) 247, 288, 445, 468, 573, 987, 2059
LmnI GCTCC 2 cut(s) 190, 1469
Lsp1109I GCAGC 4 cut(s) 577, 691, 911, 1404
LweI GCATC 5 cut(s) 787, 1220, 1266, 1595, 1627
MaeI CTAG 1 cut(s) 1362
MaeII ACGT 1 cut(s) 1087
MaeIII GTNAC 3 cut(s) 1241, 2132, 2147
MalI GATC 7 cut(s) 249, 290, 447, 470, 575, 989, 2061
MboI GATC 7 cut(s) 247, 288, 445, 468, 573, 987, 2059
MfeI CAATTG 2 cut(s) 560, 1261
MflI RGATCY 1 cut(s) 987
MhlI GDGCHC 2 cut(s) 585, 1148
MlsI TGGCCA 2 cut(s) 5, 670
MluNI TGGCCA 2 cut(s) 5, 670
Mly113I GGCGCC 1 cut(s) 1375
MlyI GAGTC 3 cut(s) 815, 1568, 2150
MmeI TCCRAC 6 cut(s) 124, 208, 744, 1542, 1708, 1945
Mox20I TGGCCA 2 cut(s) 5, 670
Mph1103I ATGCAT 1 cut(s) 1235
MscI TGGCCA 2 cut(s) 5, 670
MseI TTAA 7 cut(s) 516, 657, 702, 711, 771, 783, 1154
MslI CAYNNNNRTG 6 cut(s) 855, 1501, 1539, 1740, 2051, 2079
Msp20I TGGCCA 2 cut(s) 5, 670
MspA1I CMGCKG 2 cut(s) 526, 1510
MspI CCGG 2 cut(s) 324, 465
MspR9I CCNGG 3 cut(s) 466, 493, 748
MunI CAATTG 2 cut(s) 560, 1261
MvaI CCWGG 2 cut(s) 493, 748
MvnI CGCG 6 cut(s) 27, 170, 210, 254, 256, 281
MwoI GCNNNNNNNGC 9 cut(s) 86, 119, 128, 216, 278, 393, 676, 723, 797
NarI GGCGCC 1 cut(s) 1375
NciI CCSGG 1 cut(s) 466
NdeI CATATG 1 cut(s) 1398
NdeII GATC 7 cut(s) 247, 288, 445, 468, 573, 987, 2059
NlaIV GGNNCC 2 cut(s) 989, 1376
NmeAIII GCCGAG 1 cut(s) 264
NmuCI GTSAC 3 cut(s) 1241, 2132, 2147
NruI TCGCGA 1 cut(s) 281
NsiI ATGCAT 1 cut(s) 1235
NspI RCATGY 6 cut(s) 965, 1070, 1184, 1296, 1500, 1506
NspV TTCGAA 1 cut(s) 721
PagI TCATGA 1 cut(s) 1006
PaqCI CACCTGC 1 cut(s) 1428
PasI CCCWGGG 1 cut(s) 492
PceI AGGCCT 1 cut(s) 569
PciI ACATGT 2 cut(s) 1066, 1496
PcsI WCGNNNNNNNCGW 4 cut(s) 36, 39, 42, 66
PfeI GAWTC 8 cut(s) 262, 615, 839, 1315, 1565, 1571, 1846, 2026
PleI GAGTC 3 cut(s) 814, 1567, 2150
PluTI GGCGCC 1 cut(s) 1378
PpsI GAGTC 3 cut(s) 814, 1567, 2150
PscI ACATGT 2 cut(s) 1066, 1496
Psp6I CCWGG 2 cut(s) 491, 746
PspGI CCWGG 2 cut(s) 491, 746
PspN4I GGNNCC 2 cut(s) 989, 1376
PspPI GGNCC 2 cut(s) 321, 556
PstI CTGCAG 1 cut(s) 838
PstNI CAGNNNCTG 1 cut(s) 817
PsuI RGATCY 1 cut(s) 987
RruI TCGCGA 1 cut(s) 281
RsaI GTAC 4 cut(s) 10, 21, 177, 1501
RsaNI GTAC 4 cut(s) 9, 20, 176, 1500
RseI CAYNNNNRTG 6 cut(s) 855, 1501, 1539, 1740, 2051, 2079
Rsr2I CGGWCCG 1 cut(s) 321
RsrII CGGWCCG 1 cut(s) 321
SalI GTCGAC 1 cut(s) 1034
SaqAI TTAA 7 cut(s) 516, 657, 702, 711, 771, 783, 1154
Sau3AI GATC 7 cut(s) 247, 288, 445, 468, 573, 987, 2059
Sau96I GGNCC 2 cut(s) 321, 556
SchI GAGTC 3 cut(s) 815, 1568, 2150
ScrFI CCNGG 3 cut(s) 466, 493, 748
SduI GDGCHC 2 cut(s) 585, 1148
SfaNI GCATC 5 cut(s) 787, 1220, 1266, 1595, 1627
SfcI CTRYAG 1 cut(s) 834
SfoI GGCGCC 1 cut(s) 1376
SfuI TTCGAA 1 cut(s) 721
SinI GGWCC 1 cut(s) 321
SmiMI CAYNNNNRTG 6 cut(s) 855, 1501, 1539, 1740, 2051, 2079
SseBI AGGCCT 1 cut(s) 569
SspDI GGCGCC 1 cut(s) 1374
SspI AATATT 3 cut(s) 1528, 1655, 1874
SspMI CTAG 1 cut(s) 1362
StuI AGGCCT 1 cut(s) 569
StyD4I CCNGG 3 cut(s) 464, 491, 746
StyI CCWWGG 3 cut(s) 273, 1139, 1274
TaaI ACNGT 5 cut(s) 321, 738, 1016, 1040, 1614
TaiI ACGT 1 cut(s) 1090
TatI WGTACW 1 cut(s) 1499
TauI GCSGC 7 cut(s) 155, 170, 235, 238, 330, 371, 374
TfiI GAWTC 8 cut(s) 262, 615, 839, 1315, 1565, 1571, 1846, 2026
Tru1I TTAA 7 cut(s) 516, 657, 702, 711, 771, 783, 1154
Tru9I TTAA 7 cut(s) 516, 657, 702, 711, 771, 783, 1154
TscAI CASTG 4 cut(s) 298, 592, 743, 1617
TseFI GTSAC 3 cut(s) 1241, 2132, 2147
TseI GCWGC 4 cut(s) 590, 679, 924, 1392
Tsp45I GTSAC 3 cut(s) 1241, 2132, 2147
TspGWI ACGGA 1 cut(s) 366
TspRI CASTG 4 cut(s) 298, 592, 743, 1617
VpaK11BI GGWCC 1 cut(s) 321
XapI RAATTY 3 cut(s) 550, 1049, 1583
XceI RCATGY 6 cut(s) 965, 1070, 1184, 1296, 1500, 1506
XcmI CCANNNNNNNNNTGG 1 cut(s) 499
XmiI GTMKAC 1 cut(s) 1035
XspI CTAG 1 cut(s) 1362
Zsp2I ATGCAT 1 cut(s) 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.