Prupe.7G009900_v2.0.a1

FH protein interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000859
Physical Location & Seq
Reverse (-)
1315524 .. 1324759
9236 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G009900.2

Sequence Viewer

Length: 906 bp
ATGACGAATGACTCTGATTCCTCCTCTCTGATTCGCCTCAACATCGGAGGAACGAAGTTTTGCACTACTATTGATACTTTGACTCAGCGTGAGCCGGATTCCATGCTGGCTGCTATGTTCAGTGGTCGCCATACTCTGTGTCAGGACCCTGAAAAGGGATATGTATTTCTTGATAGGGATGGCAAACATTTCCGTCACATCCTTAATTGGTTGAGGGATGGTGTTGTTCCCACATTAAAAGATTCGAAATATACAGAAGTTCTTAGGGAGGCTGAATACTATCAACTTCTTGGGCTGATAGATGGAATACATGCTATCCTAAATAAGAAGAAGGAGGATGAAGAGTTAGATACAGAATTAACACGTACTGATATCATCAAGTGTATACAGTCTGATAGAGTCAGGTTTCGAGGTGTCAATCTTTCTGGCCTTGACCTTTCGAAATTGGACCTATCATTTGTCGACTTCAGCTATGCATGTCTGAGAAATGTCTTTTTCTCACGTGCAAACCTTCATTGTGCTAAGTTCAAGGATGTGGATGCTGAGGGTGCCAATTTTCACAATGCAACTTTGCGGGAATGTGAATTTACTGGGGCAAATCTCCGTGGAGCTTTGTTGGCTGGAGCTAATCTTCAGAGTGCAAATCTACAAGATGCATGCTTGATTAATTCTAGCTTCTGCCAGGCAGACCTGCGTTCTGCACACCTACAGAATGCTGATCTTACAAATGCCAATTTAGAGGGAGCTATTCTGGAAGGAGCAAATTTGAAGGGTGCCAAGTTGAGCAATACCAATTTGAAGGATGCAAACCTTCAACGAGCTTATTTACGACAAGTGAATCTTCGAGATACGCATTTGGAAGGTGCAAAGCTTGACGGTGCCAATTTACTCGGAGCAATGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB_2 Pentapeptide

Protein Analysis

302

Amino Acids

33.47

Weight (kDa)

6.08

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 699
AccB1I GGYRCC 3 cut(s) 548, 773, 878
AccI GTMKAC 2 cut(s) 385, 462
AciI CCGC 1 cut(s) 574
AcsI RAATTY 2 cut(s) 584, 763
AcuI CTGAAG 2 cut(s) 451, 617
AcvI CACGTG 1 cut(s) 503
AfaI GTAC 1 cut(s) 367
AfiI CCNNNNNNNGG 2 cut(s) 154, 155
AflIII ACRYGT 1 cut(s) 362
AgsI TTSAA 4 cut(s) 529, 769, 799, 815
AjnI CCWGG 1 cut(s) 681
AluBI AGCT 7 cut(s) 471, 611, 626, 675, 746, 821, 871
AluI AGCT 7 cut(s) 471, 611, 626, 675, 746, 821, 871
AoxI GGCC 1 cut(s) 427
ApeKI GCWGC 1 cut(s) 110
ApoI RAATTY 2 cut(s) 584, 763
ArsI GACNNNNNNTTYG 2 cut(s) 440, 472
AseI ATTAAT 1 cut(s) 666
AspS9I GGNCC 2 cut(s) 145, 448
AsuII TTCGAA 2 cut(s) 245, 440
AvaII GGWCC 2 cut(s) 145, 448
BanI GGYRCC 3 cut(s) 548, 773, 878
BbrPI CACGTG 1 cut(s) 503
BbvCI CCTCAGC 1 cut(s) 543
BbvI GCAGC 1 cut(s) 97
BccI CCATC 3 cut(s) 173, 212, 296
BciT130I CCWGG 1 cut(s) 683
BfaI CTAG 1 cut(s) 672
BfmI CTRYAG 1 cut(s) 707
BfuAI ACCTGC 1 cut(s) 699
BisI GCNGC 1 cut(s) 111
BlsI GCNGC 1 cut(s) 112
Bme1390I CCNGG 1 cut(s) 683
Bme18I GGWCC 2 cut(s) 145, 448
BmgT120I GGNCC 2 cut(s) 145, 448
BmiI GGNNCC 4 cut(s) 147, 550, 775, 880
BmrFI CCNGG 1 cut(s) 683
BmrI ACTGGG 1 cut(s) 600
BmsI GCATC 3 cut(s) 529, 643, 793
BmuI ACTGGG 1 cut(s) 600
BpmI CTGGAG 1 cut(s) 642
Bpu10I CCTNAGC 1 cut(s) 543
Bpu14I TTCGAA 2 cut(s) 245, 440
BsaAI YACGTR 2 cut(s) 365, 503
BsaJI CCNNGG 1 cut(s) 604
Bsc4I CCNNNNNNNGG 2 cut(s) 154, 155
Bse1I ACTGG 1 cut(s) 595
Bse3DI GCAATG 1 cut(s) 903
BseBI CCWGG 1 cut(s) 683
BseDI CCNNGG 1 cut(s) 604
BseGI GGATG 7 cut(s) 184, 198, 223, 343, 538, 544, 808
BseLI CCNNNNNNNGG 2 cut(s) 154, 155
BseMI GCAATG 1 cut(s) 903
BseMII CTCAG 3 cut(s) 98, 473, 534
BseNI ACTGG 1 cut(s) 595
BseRI GAGGAG 1 cut(s) 13
BseXI GCAGC 1 cut(s) 97
BsgI GTGCAG 1 cut(s) 684
BshFI GGCC 1 cut(s) 429
BshNI GGYRCC 3 cut(s) 548, 773, 878
BsiSI CCGG 1 cut(s) 95
BslI CCNNNNNNNGG 2 cut(s) 154, 155
BsmI GAATGC 1 cut(s) 718
BsnI GGCC 1 cut(s) 429
Bsp119I TTCGAA 2 cut(s) 245, 440
Bsp143I GATC 1 cut(s) 718
BspACI CCGC 1 cut(s) 574
BspANI GGCC 1 cut(s) 429
BspCNI CTCAG 3 cut(s) 97, 474, 535
BspLI GGNNCC 4 cut(s) 147, 550, 775, 880
BspMI ACCTGC 1 cut(s) 699
BspT104I TTCGAA 2 cut(s) 245, 440
BspT107I GGYRCC 3 cut(s) 548, 773, 878
BsrDI GCAATG 1 cut(s) 903
BsrI ACTGG 1 cut(s) 595
BssECI CCNNGG 1 cut(s) 604
BssMI GATC 1 cut(s) 718
BssNAI GTATAC 1 cut(s) 386
Bst1107I GTATAC 1 cut(s) 386
Bst2UI CCWGG 1 cut(s) 683
Bst4CI ACNGT 2 cut(s) 390, 878
Bst6I CTCTTC 1 cut(s) 336
BstBAI YACGTR 2 cut(s) 365, 503
BstBI TTCGAA 2 cut(s) 245, 440
BstC8I GCNNGC 2 cut(s) 108, 658
BstDEI CTNAG 5 cut(s) 84, 263, 482, 522, 543
BstDSI CCRYGG 1 cut(s) 604
BstF5I GGATG 7 cut(s) 184, 198, 223, 343, 538, 544, 808
BstKTI GATC 1 cut(s) 721
BstMBI GATC 1 cut(s) 718
BstMWI GCNNNNNNNGC 2 cut(s) 548, 617
BstNI CCWGG 1 cut(s) 683
BstNSI RCATGY 3 cut(s) 314, 480, 660
BstSCI CCNGG 1 cut(s) 681
BstSFI CTRYAG 1 cut(s) 707
BstV1I GCAGC 1 cut(s) 97
BstZ17I GTATAC 1 cut(s) 386
BsuRI GGCC 1 cut(s) 429
BtgI CCRYGG 1 cut(s) 604
BtsCI GGATG 7 cut(s) 184, 198, 223, 343, 538, 544, 808
BtsIMutI CAGTG 1 cut(s) 127
BveI ACCTGC 1 cut(s) 699
Cac8I GCNNGC 2 cut(s) 108, 658
Cfr13I GGNCC 2 cut(s) 145, 448
Csp6I GTAC 1 cut(s) 366
CviAII CATG 4 cut(s) 103, 311, 477, 657
CviQI GTAC 1 cut(s) 366
DdeI CTNAG 5 cut(s) 84, 263, 482, 522, 543
DpnI GATC 1 cut(s) 720
DpnII GATC 1 cut(s) 718
Eam1104I CTCTTC 1 cut(s) 336
EarI CTCTTC 1 cut(s) 336
Eco32I GATATC 1 cut(s) 373
Eco47I GGWCC 2 cut(s) 145, 448
Eco57I CTGAAG 2 cut(s) 451, 617
Eco72I CACGTG 1 cut(s) 503
EcoO109I RGGNCCY 1 cut(s) 145
EcoRII CCWGG 1 cut(s) 681
EcoRV GATATC 1 cut(s) 373
EcoT22I ATGCAT 2 cut(s) 478, 658
FaeI CATG 4 cut(s) 106, 314, 480, 660
FalI AAGNNNNNCTT 2 cut(s) 825, 857
FatI CATG 4 cut(s) 102, 310, 476, 656
FauI CCCGC 1 cut(s) 567
FblI GTMKAC 2 cut(s) 385, 462
Fnu4HI GCNGC 1 cut(s) 111
FokI GGATG 7 cut(s) 185, 191, 230, 350, 545, 551, 815
Fsp4HI GCNGC 1 cut(s) 111
FspBI CTAG 1 cut(s) 672
GluI GCNGC 1 cut(s) 111
GsuI CTGGAG 1 cut(s) 642
HaeIII GGCC 1 cut(s) 429
HapII CCGG 1 cut(s) 95
Hin1II CATG 4 cut(s) 106, 314, 480, 660
HincII GTYRAC 1 cut(s) 463
HindII GTYRAC 1 cut(s) 463
HindIII AAGCTT 1 cut(s) 869
HinfI GANTC 8 cut(s) 11, 17, 31, 82, 98, 242, 399, 838
HpaII CCGG 1 cut(s) 95
Hpy166II GTNNAC 2 cut(s) 386, 463
Hpy188I TCNGA 7 cut(s) 16, 30, 47, 394, 483, 636, 893
Hpy188III TCNNGA 4 cut(s) 143, 170, 752, 845
Hpy8I GTNNAC 2 cut(s) 386, 463
HpyAV CCTTC 7 cut(s) 325, 521, 749, 763, 793, 821, 854
HpyCH4III ACNGT 2 cut(s) 390, 878
HpyCH4IV ACGT 2 cut(s) 364, 502
HpyCH4V TGCA 9 cut(s) 63, 476, 506, 566, 641, 656, 701, 806, 866
HpyF10VI GCNNNNNNNGC 2 cut(s) 548, 617
HpyF3I CTNAG 5 cut(s) 84, 263, 482, 522, 543
HpySE526I ACGT 2 cut(s) 364, 502
Hsp92II CATG 4 cut(s) 106, 314, 480, 660
Kzo9I GATC 1 cut(s) 718
LmnI GCTCC 5 cut(s) 608, 623, 743, 758, 893
Lsp1109I GCAGC 1 cut(s) 97
LweI GCATC 3 cut(s) 529, 643, 793
MaeI CTAG 1 cut(s) 672
MaeII ACGT 2 cut(s) 364, 502
MaeIII GTNAC 1 cut(s) 194
MalI GATC 1 cut(s) 720
MboI GATC 1 cut(s) 718
MboII GAAGA 4 cut(s) 340, 353, 623, 833
MlyI GAGTC 3 cut(s) 5, 76, 408
Mph1103I ATGCAT 2 cut(s) 478, 658
MseI TTAA 4 cut(s) 204, 236, 359, 666
MspI CCGG 1 cut(s) 95
MspR9I CCNGG 1 cut(s) 683
Mva1269I GAATGC 1 cut(s) 718
MvaI CCWGG 1 cut(s) 683
MwoI GCNNNNNNNGC 2 cut(s) 548, 617
NdeII GATC 1 cut(s) 718
NlaIII CATG 4 cut(s) 106, 314, 480, 660
NlaIV GGNNCC 4 cut(s) 147, 550, 775, 880
NmuCI GTSAC 1 cut(s) 194
NsiI ATGCAT 2 cut(s) 478, 658
NspI RCATGY 3 cut(s) 314, 480, 660
NspV TTCGAA 2 cut(s) 245, 440
PaeI GCATGC 1 cut(s) 660
PctI GAATGC 1 cut(s) 718
PfeI GAWTC 5 cut(s) 17, 31, 98, 242, 838
PkrI GCNGC 1 cut(s) 112
PleI GAGTC 3 cut(s) 5, 76, 407
PmaCI CACGTG 1 cut(s) 503
PmlI CACGTG 1 cut(s) 503
PpsI GAGTC 3 cut(s) 5, 76, 407
Ppu21I YACGTR 2 cut(s) 365, 503
PpuMI RGGWCCY 1 cut(s) 145
PshBI ATTAAT 1 cut(s) 666
Psp5II RGGWCCY 1 cut(s) 145
Psp6I CCWGG 1 cut(s) 681
PspCI CACGTG 1 cut(s) 503
PspGI CCWGG 1 cut(s) 681
PspN4I GGNNCC 4 cut(s) 147, 550, 775, 880
PspPI GGNCC 2 cut(s) 145, 448
PspPPI RGGWCCY 1 cut(s) 145
RsaI GTAC 1 cut(s) 367
RsaNI GTAC 1 cut(s) 366
SalI GTCGAC 1 cut(s) 461
SaqAI TTAA 4 cut(s) 204, 236, 359, 666
SatI GCNGC 1 cut(s) 111
Sau3AI GATC 1 cut(s) 718
Sau96I GGNCC 2 cut(s) 145, 448
SchI GAGTC 3 cut(s) 5, 76, 408
ScrFI CCNGG 1 cut(s) 683
SfaNI GCATC 3 cut(s) 529, 643, 793
SfcI CTRYAG 1 cut(s) 707
SfuI TTCGAA 2 cut(s) 245, 440
SinI GGWCC 2 cut(s) 145, 448
SphI GCATGC 1 cut(s) 660
SsiI CCGC 1 cut(s) 574
SspMI CTAG 1 cut(s) 672
StyD4I CCNGG 1 cut(s) 681
TaaI ACNGT 2 cut(s) 390, 878
TaiI ACGT 2 cut(s) 367, 505
TaqI TCGA 5 cut(s) 245, 409, 440, 462, 844
TfiI GAWTC 5 cut(s) 17, 31, 98, 242, 838
Tru1I TTAA 4 cut(s) 204, 236, 359, 666
Tru9I TTAA 4 cut(s) 204, 236, 359, 666
TscAI CASTG 1 cut(s) 127
TseFI GTSAC 1 cut(s) 194
TseI GCWGC 1 cut(s) 110
Tsp45I GTSAC 1 cut(s) 194
TspDTI ATGAA 2 cut(s) 354, 503
TspGWI ACGGA 2 cut(s) 182, 593
TspRI CASTG 1 cut(s) 127
VpaK11BI GGWCC 2 cut(s) 145, 448
VspI ATTAAT 1 cut(s) 666
XapI RAATTY 2 cut(s) 584, 763
XceI RCATGY 3 cut(s) 314, 480, 660
XmiI GTMKAC 2 cut(s) 385, 462
XspI CTAG 1 cut(s) 672
Zsp2I ATGCAT 2 cut(s) 478, 658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.