Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013610

Physical Location & Seq

Genomic Coordinates Reverse (-)

36051371 .. 36053908

Gene Structure 2538 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24634

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGTGCCTTCTGAAGGTGGCGAACCAGAGGAGCTCAGGTGACGGCGGGCCGTTTCAAGCTCAAAACGACGACGTTGTCCCCGTGGACTATGAGGAAGCTAGCGGAGAATTGATGAGTAATCAACTAGTACAAGGTGTTAGACTGCAACGACGACCTCAGTCGACTGTGTCGCCGTCTATGTTGTTGGGGTATAGTCGGCCGGAGGCGGAGATGTCGGCGATGGTGTCGGCTCTGACGCATGTCGTATCGGGACAGAGACATGTCGTTTCGGGTTCAAGCGGTGGAGTTGCTTCAAGTTTCGGTCAAGTTTATTCTGCTGCCAGTGGCAACTCTCCACCTTTATCAGCTTTCTCTTCAAATAATAATAATACATCTTCCTCTTCTGGCTCCCGGGCTGGTCAAAAGAGAGGCAGAGAAGAACAGACTCAAGCCCTTTTGATGGATCAAAGTAATAGGCCTTATGGAGGTGGCTATGCTGATTTCAGAGCAACTCAGCCGGAATCTTCAACCGGTGCAACAACAACTGTTTATGAAGATGACACGAAATCTGTCACCACTGCCGGTAGCACCGTCACTGCGACCGCTTCCACCGCAGTAAGATCAGTTGTTGCTGAAACTGTTTCCCCAGAAGAAACCGGCGAGAGGAGAAGAAGATACAGGGGAGTCCGGCAGCGGCCCTGGGGAAAATGGGCCGCCGAGATTCGTGACCCACACAAGGCGGCCAGAGTCTGGCTCGGCACTTTCGACACCGCCGAGGCCGCCGCCAGAGCCTACGACGAAGCTGCCTTAAGGTTCAGGGGAAACAGAGCCAAGCTTAACTTCCCTGAAAATGTGAGAGTCATACCACCACAGCAACCCCTCCAGAACTACGCTCAGTCCATCAGTTCACATTCTGCATCAACTCATTTGGCGCCAAACCGACCCGTACGGCCATTGCAGCCTCCAACGCAGCCACTACAACACCAACAACCGCTTTATCAGTCTCAACCTTTCCAGGGCTCCCCTGACTTGCTCAGAGACTATCTGGACTATTCTCATTTGCTTCAGAGCTCCATCGACATTCACTCGCAACAACAACCCCAGCCGACGAATTTCCTGGAGCAGATGTACTACAATTCCCAATTAGCTTCACTTCAGTCCTCGCTATTGCAACAACCACCACCCTCATCATCCACTGTGTCTTCCGCATTGCCATCCTCTGCTTCCTCCTCTGCTTCATTTCCTCTGCTTTTCTCGGATCATCAGCAGCAGCTAAGTTTCTTCGAGGCGCCGGAGAATCAGAATCCGGGCGGTTCATCGGGCTTTCCAGCACCATCTTGGTCACAGTCCGGTCACAATCATTCGTCTTCCGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009787 GO:0009788 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009968 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010648 GO:0019219 GO:0019222 GO:0023051 GO:0023057 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033993 GO:0034284 GO:0040034 GO:0042221 GO:0043207 GO:0045893 GO:0045935 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097305 GO:0098542 GO:0140110 GO:1901419 GO:1901420 GO:1901700 GO:1902074 GO:1902680 GO:1903506 GO:1903508 GO:1905957 GO:1905958 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

451

Amino Acids

48.67

Weight (kDa)

6.84

Isoelectric Point (pI)

71.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	218 - 267	1.1e-14	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013610)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13240 FvH4_2g13240
malus_domestica	MD05G1030800.v1.1 MD10G1032000.v1.1
prunus_persica	Prupe.8G037900_v2.0.a1
pyrus_communis	pycom05g02190 pycom10g02050
rosa_chinensis	RchiOBHm_Chr6g0274591
rosa_laevigata	RLG00000013534
rosa_multiflora	Rmu_sc0006850.1_g000002
rosa_roxburghii	Rroxscaffold_7G00194100
rosa_rugosa	Rorug06G0082400 Rorug06G0082500
rosa_samantha	Rh6AG198800 Rh6BG202000 Rh6CG202700 Rh6DG193800
rosa_wichuraiana	Rw6G017280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	74
AccB1I	GGYRCC	2 cut(s)	910, 1267
AccB7I	CCANNNNNTGG	1 cut(s)	729
AccI	GTMKAC	1 cut(s)	161
AclWI	GGATC	2 cut(s)	450, 1245
AcoI	YGGCCR	3 cut(s)	197, 720, 929
AcsI	RAATTY	1 cut(s)	1090
AcuI	CTGAAG	3 cut(s)	32, 1028, 1118
AcyI	GRCGYC	2 cut(s)	911, 1268
AfaI	GTAC	3 cut(s)	129, 927, 1109
AfiI	CCNNNNNNNGG	7 cut(s)	13, 439, 464, 642, 715, 729, 995
AflII	CTTAAG	1 cut(s)	787
AflIII	ACRYGT	1 cut(s)	259
AgeI	ACCGGT	1 cut(s)	509
AgsI	TTSAA	5 cut(s)	56, 276, 294, 357, 507
AhlI	ACTAGT	1 cut(s)	124
AjnI	CCWGG	3 cut(s)	677, 993, 1095
AjuI	GAANNNNNNNTTGG	2 cut(s)	803, 835
AluBI	AGCT	9 cut(s)	33, 59, 98, 347, 782, 814, 1050, 1127, 1252
AluI	AGCT	9 cut(s)	33, 59, 98, 347, 782, 814, 1050, 1127, 1252
Alw21I	GWGCWC	2 cut(s)	35, 1052
Alw26I	GTCTC	3 cut(s)	250, 987, 1011
AlwI	GGATC	2 cut(s)	450, 1245
AlwNI	CAGNNNCTG	1 cut(s)	729
Ama87I	CYCGRG	1 cut(s)	390
AoxI	GGCC	8 cut(s)	47, 197, 455, 674, 690, 720, 756, 929
ApeKI	GCWGC	7 cut(s)	317, 670, 782, 937, 949, 1246, 1249
ApoI	RAATTY	1 cut(s)	1090
AsiGI	ACCGGT	1 cut(s)	509
AspLEI	GCGC	2 cut(s)	913, 1270
AspS9I	GGNCC	3 cut(s)	47, 675, 690
AsuC2I	CCSGG	3 cut(s)	391, 392, 1287
AsuHPI	GGTGA	2 cut(s)	50, 544
AsuNHI	GCTAGC	1 cut(s)	98
AvaI	CYCGRG	1 cut(s)	390
BanI	GGYRCC	2 cut(s)	910, 1267
BanII	GRGCYC	3 cut(s)	35, 1001, 1052
BbsI	GAAGAC	2 cut(s)	1173, 1338
Bbv12I	GWGCWC	2 cut(s)	35, 1052
BbvI	GCAGC	7 cut(s)	304, 682, 769, 949, 961, 1258, 1261
BccI	CCATC	6 cut(s)	214, 433, 887, 1061, 1201, 1321
BceAI	ACGGC	4 cut(s)	34, 58, 157, 944
BcgI	CGANNNNNNTGC	2 cut(s)	764, 798
BciT130I	CCWGG	3 cut(s)	679, 995, 1097
BcnI	CCSGG	3 cut(s)	391, 392, 1287
BcoDI	GTCTC	3 cut(s)	250, 987, 1011
BcuI	ACTAGT	1 cut(s)	124
BfaI	CTAG	2 cut(s)	99, 125
BfoI	RGCGCY	2 cut(s)	914, 1271
BfrI	CTTAAG	1 cut(s)	787
Bme1390I	CCNGG	6 cut(s)	391, 392, 679, 995, 1097, 1287
BmeT110I	CYCGRG	1 cut(s)	390
BmgT120I	GGNCC	3 cut(s)	47, 675, 690
BmiI	GGNNCC	4 cut(s)	388, 912, 1000, 1269
BmrFI	CCNGG	6 cut(s)	391, 392, 679, 995, 1097, 1287
BmsI	GCATC	1 cut(s)	905
BmtI	GCTAGC	1 cut(s)	102
BoxI	GACNNNNGTC	2 cut(s)	157, 239
BpiI	GAAGAC	2 cut(s)	1173, 1338
BplI	GAGNNNNNCTC	2 cut(s)	717, 749
BpmI	CTGGAG	2 cut(s)	845, 1118
Bpu10I	CCTNAGC	1 cut(s)	34
BpuEI	CTTGAG	1 cut(s)	411
BpuMI	CCSGG	3 cut(s)	391, 392, 1287
BsaHI	GRCGYC	2 cut(s)	911, 1268
BsaJI	CCNNGG	6 cut(s)	81, 390, 677, 678, 753, 994
BsaWI	WCCGGW	2 cut(s)	509, 1328
BsaXI	ACNNNNNCTCC	4 cut(s)	22, 52, 1091, 1121
Bsc4I	CCNNNNNNNGG	7 cut(s)	13, 439, 464, 642, 715, 729, 995
Bse118I	RCCGGY	3 cut(s)	509, 560, 635
Bse1I	ACTGG	1 cut(s)	321
Bse3DI	GCAATG	2 cut(s)	932, 1187
BseBI	CCWGG	3 cut(s)	679, 995, 1097
BseDI	CCNNGG	6 cut(s)	81, 390, 677, 678, 753, 994
BseGI	GGATG	2 cut(s)	1169, 1193
BseLI	CCNNNNNNNGG	7 cut(s)	13, 439, 464, 642, 715, 729, 995
BseMI	GCAATG	2 cut(s)	932, 1187
BseMII	CTCAG	5 cut(s)	48, 170, 506, 887, 1027
BseNI	ACTGG	1 cut(s)	321
BseRI	GAGGAG	3 cut(s)	43, 658, 1198
BseX3I	CGGCCG	1 cut(s)	197
BseXI	GCAGC	7 cut(s)	304, 682, 769, 949, 961, 1258, 1261
BseYI	CCCAGC	1 cut(s)	1080
Bsh1285I	CGRYCG	2 cut(s)	200, 582
BshFI	GGCC	8 cut(s)	49, 199, 457, 676, 692, 722, 758, 931
BshNI	GGYRCC	2 cut(s)	910, 1267
BshTI	ACCGGT	1 cut(s)	509
BsiEI	CGRYCG	2 cut(s)	200, 582
BsiHKAI	GWGCWC	2 cut(s)	35, 1052
BsiHKCI	CYCGRG	1 cut(s)	390
BsiWI	CGTACG	1 cut(s)	925
BslFI	GGGAC	2 cut(s)	62, 264
BslI	CCNNNNNNNGG	7 cut(s)	13, 439, 464, 642, 715, 729, 995
BsmAI	GTCTC	3 cut(s)	250, 987, 1011
BsmFI	GGGAC	2 cut(s)	62, 264
BsnI	GGCC	8 cut(s)	49, 199, 457, 676, 692, 722, 758, 931
BsoBI	CYCGRG	1 cut(s)	390
Bsp1286I	GDGCHC	3 cut(s)	35, 1001, 1052
Bsp143I	GATC	3 cut(s)	442, 599, 1237
BspANI	GGCC	8 cut(s)	49, 199, 457, 676, 692, 722, 758, 931
BspCNI	CTCAG	5 cut(s)	47, 169, 505, 886, 1026
BspLI	GGNNCC	4 cut(s)	388, 912, 1000, 1269
BspOI	GCTAGC	1 cut(s)	102
BspPI	GGATC	2 cut(s)	450, 1245
BspT107I	GGYRCC	2 cut(s)	910, 1267
BspTI	CTTAAG	1 cut(s)	787
BsrDI	GCAATG	2 cut(s)	932, 1187
BsrFI	RCCGGY	3 cut(s)	509, 560, 635
BsrI	ACTGG	1 cut(s)	321
BssAI	RCCGGY	3 cut(s)	509, 560, 635
BssECI	CCNNGG	6 cut(s)	81, 390, 677, 678, 753, 994
BssMI	GATC	3 cut(s)	442, 599, 1237
BssNI	GRCGYC	2 cut(s)	911, 1268
Bst2UI	CCWGG	3 cut(s)	679, 995, 1097
Bst4CI	ACNGT	6 cut(s)	166, 526, 571, 619, 1177, 1326
Bst6I	CTCTTC	2 cut(s)	358, 385
BstACI	GRCGYC	2 cut(s)	911, 1268
BstAFI	CTTAAG	1 cut(s)	787
BstC8I	GCNNGC	2 cut(s)	47, 100
BstDEI	CTNAG	6 cut(s)	34, 156, 492, 873, 1013, 1253
BstDSI	CCRYGG	1 cut(s)	81
BstENI	CCTNNNNNAGG	2 cut(s)	11, 462
BstF5I	GGATG	2 cut(s)	1169, 1193
BstH2I	RGCGCY	2 cut(s)	914, 1271
BstHHI	GCGC	2 cut(s)	913, 1270
BstKTI	GATC	3 cut(s)	445, 602, 1240
BstMAI	GTCTC	3 cut(s)	250, 987, 1011
BstMBI	GATC	3 cut(s)	442, 599, 1237
BstMCI	CGRYCG	2 cut(s)	200, 582
BstMWI	GCNNNNNNNGC	5 cut(s)	590, 758, 767, 937, 946
BstNI	CCWGG	3 cut(s)	679, 995, 1097
BstNSI	RCATGY	2 cut(s)	242, 263
BstPAI	GACNNNNGTC	2 cut(s)	157, 239
BstSCI	CCNGG	6 cut(s)	389, 390, 677, 993, 1095, 1285
BstV1I	GCAGC	7 cut(s)	304, 682, 769, 949, 961, 1258, 1261
BstV2I	GAAGAC	2 cut(s)	1173, 1338
BstZI	CGGCCG	1 cut(s)	197
BsuRI	GGCC	8 cut(s)	49, 199, 457, 676, 692, 722, 758, 931
BtgI	CCRYGG	1 cut(s)	81
BtgZI	GCGATG	1 cut(s)	233
BtsCI	GGATG	2 cut(s)	1169, 1193
BtsI	GCAGTG	2 cut(s)	555, 573
BtsIMutI	CAGTG	4 cut(s)	328, 555, 573, 1173
Cac8I	GCNNGC	2 cut(s)	47, 100
CaiI	CAGNNNCTG	1 cut(s)	729
CfoI	GCGC	2 cut(s)	913, 1270
Cfr10I	RCCGGY	3 cut(s)	509, 560, 635
Cfr13I	GGNCC	3 cut(s)	47, 675, 690
Cfr9I	CCCGGG	1 cut(s)	390
CseI	GACGC	1 cut(s)	244
Csp6I	GTAC	3 cut(s)	128, 926, 1108
CspAI	ACCGGT	1 cut(s)	509
CviAII	CATG	2 cut(s)	239, 260
CviQI	GTAC	3 cut(s)	128, 926, 1108
DdeI	CTNAG	6 cut(s)	34, 156, 492, 873, 1013, 1253
DinI	GGCGCC	2 cut(s)	912, 1269
DpnI	GATC	3 cut(s)	444, 601, 1239
DpnII	GATC	3 cut(s)	442, 599, 1237
DrdI	GACNNNNNNGTC	1 cut(s)	74
DseDI	GACNNNNNNGTC	1 cut(s)	74
EaeI	YGGCCR	3 cut(s)	197, 720, 929
EagI	CGGCCG	1 cut(s)	197
Eam1104I	CTCTTC	2 cut(s)	358, 385
EarI	CTCTTC	2 cut(s)	358, 385
EciI	GGCGGA	1 cut(s)	221
Ecl136II	GAGCTC	2 cut(s)	33, 1050
EclXI	CGGCCG	1 cut(s)	197
Eco147I	AGGCCT	1 cut(s)	457
Eco24I	GRGCYC	3 cut(s)	35, 1001, 1052
Eco52I	CGGCCG	1 cut(s)	197
Eco53kI	GAGCTC	2 cut(s)	33, 1050
Eco57I	CTGAAG	3 cut(s)	32, 1028, 1118
Eco88I	CYCGRG	1 cut(s)	390
EcoICRI	GAGCTC	2 cut(s)	33, 1050
EcoNI	CCTNNNNNAGG	2 cut(s)	11, 462
EcoRII	CCWGG	3 cut(s)	677, 993, 1095
EcoT38I	GRGCYC	3 cut(s)	35, 1001, 1052
EgeI	GGCGCC	2 cut(s)	912, 1269
EheI	GGCGCC	2 cut(s)	912, 1269
FaeI	CATG	2 cut(s)	242, 263
FaiI	YATR	9 cut(s)	90, 179, 192, 240, 261, 462, 474, 531, 842
FalI	AAGNNNNNCTT	2 cut(s)	803, 835
FaqI	GGGAC	2 cut(s)	62, 264
FatI	CATG	2 cut(s)	238, 259
FauI	CCCGC	1 cut(s)	38
FblI	GTMKAC	1 cut(s)	161
FokI	GGATG	2 cut(s)	1156, 1180
FriOI	GRGCYC	3 cut(s)	35, 1001, 1052
FspBI	CTAG	2 cut(s)	99, 125
GlaI	GCGC	2 cut(s)	912, 1269
GsaI	CCCAGC	1 cut(s)	1084
GsuI	CTGGAG	2 cut(s)	845, 1118
HaeII	RGCGCY	2 cut(s)	914, 1271
HaeIII	GGCC	8 cut(s)	49, 199, 457, 676, 692, 722, 758, 931
HgaI	GACGC	1 cut(s)	244
HhaI	GCGC	2 cut(s)	913, 1270
Hin1I	GRCGYC	2 cut(s)	911, 1268
Hin1II	CATG	2 cut(s)	242, 263
Hin6I	GCGC	2 cut(s)	911, 1268
HinP1I	GCGC	2 cut(s)	911, 1268
HincII	GTYRAC	1 cut(s)	162
HindII	GTYRAC	1 cut(s)	162
HindIII	AAGCTT	1 cut(s)	812
HinfI	GANTC	8 cut(s)	424, 500, 663, 700, 726, 837, 1276, 1282
HphI	GGTGA	2 cut(s)	50, 544
Hpy166II	GTNNAC	3 cut(s)	85, 162, 887
Hpy188I	TCNGA	7 cut(s)	12, 234, 485, 1016, 1047, 1237, 1281
Hpy188III	TCNNGA	4 cut(s)	249, 704, 862, 1025
Hpy8I	GTNNAC	3 cut(s)	85, 162, 887
Hpy99I	CGWCG	5 cut(s)	71, 74, 153, 779, 1090
HpyAV	CCTTC	2 cut(s)	7, 17
HpyCH4III	ACNGT	6 cut(s)	166, 526, 571, 619, 1177, 1326
HpyCH4IV	ACGT	1 cut(s)	72
HpyCH4V	TGCA	5 cut(s)	145, 515, 896, 937, 1150
HpyF10VI	GCNNNNNNNGC	5 cut(s)	590, 758, 767, 937, 946
HpyF3I	CTNAG	6 cut(s)	34, 156, 492, 873, 1013, 1253
HpySE526I	ACGT	1 cut(s)	72
Hsp92I	GRCGYC	2 cut(s)	911, 1268
Hsp92II	CATG	2 cut(s)	242, 263
HspAI	GCGC	2 cut(s)	911, 1268
KasI	GGCGCC	2 cut(s)	910, 1267
Kzo9I	GATC	3 cut(s)	442, 599, 1237
LmnI	GCTCC	5 cut(s)	30, 392, 1004, 1055, 1099
Lsp1109I	GCAGC	7 cut(s)	304, 682, 769, 949, 961, 1258, 1261
LweI	GCATC	1 cut(s)	905
MaeI	CTAG	2 cut(s)	99, 125
MaeII	ACGT	1 cut(s)	72
MaeIII	GTNAC	6 cut(s)	38, 550, 571, 704, 1320, 1331
MalI	GATC	3 cut(s)	444, 601, 1239
MboI	GATC	3 cut(s)	442, 599, 1237
MhlI	GDGCHC	3 cut(s)	35, 1001, 1052
MluCI	AATT	4 cut(s)	107, 1090, 1114, 1121
Mly113I	GGCGCC	2 cut(s)	911, 1268
MlyI	GAGTC	4 cut(s)	418, 672, 735, 846
MmeI	TCCRAC	1 cut(s)	968
MseI	TTAA	2 cut(s)	788, 816
MspA1I	CMGCKG	1 cut(s)	673
MspCI	CTTAAG	1 cut(s)	787
MspR9I	CCNGG	6 cut(s)	391, 392, 679, 995, 1097, 1287
MvaI	CCWGG	3 cut(s)	679, 995, 1097
MwoI	GCNNNNNNNGC	5 cut(s)	590, 758, 767, 937, 946
NarI	GGCGCC	2 cut(s)	911, 1268
NciI	CCSGG	3 cut(s)	391, 392, 1287
NdeII	GATC	3 cut(s)	442, 599, 1237
NheI	GCTAGC	1 cut(s)	98
NlaIII	CATG	2 cut(s)	242, 263
NlaIV	GGNNCC	4 cut(s)	388, 912, 1000, 1269
NmeAIII	GCCGAG	3 cut(s)	714, 721, 778
NmuCI	GTSAC	6 cut(s)	38, 550, 571, 704, 1320, 1331
NspI	RCATGY	2 cut(s)	242, 263
PasI	CCCWGGG	1 cut(s)	678
PceI	AGGCCT	1 cut(s)	457
PciI	ACATGT	1 cut(s)	259
PcsI	WCGNNNNNNNCGW	3 cut(s)	78, 741, 750
PfeI	GAWTC	4 cut(s)	500, 700, 1276, 1282
Pfl23II	CGTACG	1 cut(s)	925
PflFI	GACNNNGTC	2 cut(s)	74, 166
PflMI	CCANNNNNTGG	1 cut(s)	729
PfoI	TCCNGGA	1 cut(s)	1095
PinAI	ACCGGT	1 cut(s)	509
PleI	GAGTC	4 cut(s)	418, 671, 734, 845
PluTI	GGCGCC	2 cut(s)	914, 1271
PpsI	GAGTC	4 cut(s)	418, 671, 734, 845
PscI	ACATGT	1 cut(s)	259
PshAI	GACNNNNGTC	2 cut(s)	157, 239
Psp124BI	GAGCTC	2 cut(s)	35, 1052
Psp6I	CCWGG	3 cut(s)	677, 993, 1095
PspFI	CCCAGC	1 cut(s)	1080
PspGI	CCWGG	3 cut(s)	677, 993, 1095
PspLI	CGTACG	1 cut(s)	925
PspN4I	GGNNCC	4 cut(s)	388, 912, 1000, 1269
PspPI	GGNCC	3 cut(s)	47, 675, 690
PstNI	CAGNNNCTG	1 cut(s)	729
PsyI	GACNNNGTC	2 cut(s)	74, 166
RsaI	GTAC	3 cut(s)	129, 927, 1109
RsaNI	GTAC	3 cut(s)	128, 926, 1108
SacI	GAGCTC	2 cut(s)	35, 1052
SalI	GTCGAC	1 cut(s)	160
SaqAI	TTAA	2 cut(s)	788, 816
Sau3AI	GATC	3 cut(s)	442, 599, 1237
Sau96I	GGNCC	3 cut(s)	47, 675, 690
SchI	GAGTC	4 cut(s)	418, 672, 735, 846
ScrFI	CCNGG	6 cut(s)	391, 392, 679, 995, 1097, 1287
SduI	GDGCHC	3 cut(s)	35, 1001, 1052
SfaNI	GCATC	1 cut(s)	905
SfoI	GGCGCC	2 cut(s)	912, 1269
SmaI	CCCGGG	1 cut(s)	392
SmlI	CTYRAG	2 cut(s)	426, 787
SmoI	CTYRAG	2 cut(s)	426, 787
SpeI	ACTAGT	1 cut(s)	124
Sse9I	AATT	4 cut(s)	107, 1090, 1114, 1121
SseBI	AGGCCT	1 cut(s)	457
SspDI	GGCGCC	2 cut(s)	910, 1267
SspMI	CTAG	2 cut(s)	99, 125
SstI	GAGCTC	2 cut(s)	35, 1052
StuI	AGGCCT	1 cut(s)	457
StyD4I	CCNGG	6 cut(s)	389, 390, 677, 993, 1095, 1285
TaaI	ACNGT	6 cut(s)	166, 526, 571, 619, 1177, 1326
TaiI	ACGT	1 cut(s)	75
TaqI	TCGA	4 cut(s)	161, 744, 1056, 1263
TaqII	GACCGA	1 cut(s)	290
TasI	AATT	4 cut(s)	107, 1090, 1114, 1121
TatI	WGTACW	2 cut(s)	127, 1107
TauI	GCSGC	5 cut(s)	676, 695, 722, 761, 764
TfiI	GAWTC	4 cut(s)	500, 700, 1276, 1282
Tru1I	TTAA	2 cut(s)	788, 816
Tru9I	TTAA	2 cut(s)	788, 816
TscAI	CASTG	4 cut(s)	328, 562, 580, 1180
TseFI	GTSAC	6 cut(s)	38, 550, 571, 704, 1320, 1331
TseI	GCWGC	7 cut(s)	317, 670, 782, 937, 949, 1246, 1249
Tsp45I	GTSAC	6 cut(s)	38, 550, 571, 704, 1320, 1331
TspDTI	ATGAA	3 cut(s)	546, 1206, 1284
TspMI	CCCGGG	1 cut(s)	390
TspRI	CASTG	4 cut(s)	328, 562, 580, 1180
Tth111I	GACNNNGTC	2 cut(s)	74, 166
Van91I	CCANNNNNTGG	1 cut(s)	729
Vha464I	CTTAAG	1 cut(s)	787
XagI	CCTNNNNNAGG	2 cut(s)	11, 462
XapI	RAATTY	1 cut(s)	1090
XceI	RCATGY	2 cut(s)	242, 263
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1314
XmaI	CCCGGG	1 cut(s)	390
XmiI	GTMKAC	1 cut(s)	161
XspI	CTAG	2 cut(s)	99, 125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.