Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0013610

Physical Location & Seq

Genomic Coordinates Forward (+)

35844514 .. 35846981

Gene Structure 2468 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00194100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGTGCCTTCTGAAGGTGGCGAACCAGAGGAGCTCAGGTGACGGCGGGCCGTTTCAAGCTCAAAACGACGACGTTGTCCCCGTGGACTATGAGGAAGCTAGCGGAGAATTGATGAGTAATCAACTAGTACAAGGTGTTGGACTGCAACGTCGACCTCAGTCGACTGTATCGCCGTCTATGTTTTTGGGGTATAGTCGACCGGCGGCGGAGATGTCGGCGATGGTGTCGGCTCTGACGCATGTCGTATCGGGACGGGGACATGTCGTTTCGGGTTCAAGCGGTGGAGTTGCTTCAAGTTTCGGTCAAGTTTATTCTGCTGCCAGTGGCAACTCCCCACCTTTATCAGCTTTCTCTTCAAATAATAATAATACATCTTCCTCTTCTTGCTCCGGGGTTGGTCAAAAGAGAGGCAGAGAAGAACAGACTCAAGCCCTTTTGATGGATCAAAGTAATAGGCCTTATAGAGGTGGCTATGCTGATTTCAAAGCAACTCAGCCGGAATCTTCAACCGGTGCAACAACAACTGTTTATGAAGATGACACGAAATCTGTCACCACCGCCTGCAGCACCGTCACTGCGACCGCTTCCACCGCAGTAAGATCAACTCCATCAACTGCTGAAACTGTTTCCCCAGAAGAAACCGGGGAGAGGAGAAGAAGATACAGGGGAGTCCGGCAGCGGCCCTGGGGAAAATGGGCCGCCGAGATTCGTGACCCACACAAGGCGGCCAGAGTCTGGCTCGGCACTTTCGACACCGCCGAGGCCGCCGCCAGAGCCTACGACGAAGCTGCCTTAAGGTTCAGGGGAAACAGAGCCAAGCTTAACTTCCCTGAAAATGTGAGAGTCATACCACCACAGCAACCCCTCCAGAACTACGCTCAATCCATCAGTTCACATTCTGCATCACCTCATTTGGCCCCAAACCGATCCGTACGGCCATTGCAGCCTCCAACGCAGCCACTACAACACCAACAACCGCTTTATCAGTCTCAACCTTTCCAGGGCTCCCCTGACTTGCTCAGAGACTATCTGGACTACTCTCATTTGCTTCAGAGCTCCATCGACATTCACTCACAACAACAACCCCAGCCGACGAATTTCTTGGAGCAGATGTACTACAATTCCCAATTAGCTTCACTTCAGTCCTCGCTATTGCAACAACCACCACCCTCATCATCCACTTTGTCTTCCGCATTGCCATCCTCTGCTTCCTCCTCTGCTTCATTTCCTCTGCTTTTCTCGGATCATCAGCAGCAGCTAAGTTTTTTCGGGGCGCCGCAGAATCAGAATCCGGGCGGTTCATCGGGCTTTCCAGCACCATCTTGGTCACAGTCTGGTCACAATCATTCGTCTTCCGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009787 GO:0009788 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009968 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010648 GO:0019219 GO:0019222 GO:0023051 GO:0023057 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033993 GO:0034284 GO:0040034 GO:0042221 GO:0043207 GO:0045893 GO:0045935 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097305 GO:0098542 GO:0140110 GO:1901419 GO:1901420 GO:1901700 GO:1902074 GO:1902680 GO:1903506 GO:1903508 GO:1905957 GO:1905958 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

453

Amino Acids

48.69

Weight (kDa)

7.8

Isoelectric Point (pI)

71.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	220 - 269	1.1e-14	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013610)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13240 FvH4_2g13240
malus_domestica	MD05G1030800.v1.1 MD10G1032000.v1.1
prunus_persica	Prupe.8G037900_v2.0.a1
pyrus_communis	pycom05g02190 pycom10g02050
rosa_chinensis	RchiOBHm_Chr6g0274591
rosa_laevigata	RLG00000013534
rosa_multiflora	Rmu_sc0006850.1_g000002
rosa_roxburghii	Rroxscaffold_7G00194100
rosa_rugosa	Rorug06G0082400 Rorug06G0082500
rosa_samantha	Rh6AG198800 Rh6BG202000 Rh6CG202700 Rh6DG193800
rosa_wichuraiana	Rw6G017280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	74, 147
AccB1I	GGYRCC	1 cut(s)	1273
AccB7I	CCANNNNNTGG	1 cut(s)	735
AccI	GTMKAC	3 cut(s)	151, 161, 196
AclWI	GGATC	3 cut(s)	450, 921, 1251
AcoI	YGGCCR	2 cut(s)	726, 935
AcsI	RAATTY	1 cut(s)	1096
AcuI	CTGAAG	3 cut(s)	32, 1034, 1124
AcyI	GRCGYC	1 cut(s)	1274
AfaI	GTAC	3 cut(s)	129, 933, 1115
AfiI	CCNNNNNNNGG	7 cut(s)	13, 439, 464, 648, 721, 735, 1001
AflII	CTTAAG	1 cut(s)	793
AflIII	ACRYGT	1 cut(s)	259
AgeI	ACCGGT	1 cut(s)	509
AgsI	TTSAA	6 cut(s)	56, 276, 294, 357, 484, 507
AhlI	ACTAGT	1 cut(s)	124
AjnI	CCWGG	2 cut(s)	683, 999
AjuI	GAANNNNNNNTTGG	2 cut(s)	809, 841
AluBI	AGCT	9 cut(s)	33, 59, 98, 347, 788, 820, 1056, 1133, 1258
AluI	AGCT	9 cut(s)	33, 59, 98, 347, 788, 820, 1056, 1133, 1258
Alw21I	GWGCWC	2 cut(s)	35, 1058
Alw26I	GTCTC	2 cut(s)	993, 1017
AlwI	GGATC	3 cut(s)	450, 921, 1251
AlwNI	CAGNNNCTG	1 cut(s)	735
AoxI	GGCC	8 cut(s)	47, 455, 680, 696, 726, 762, 915, 935
ApeKI	GCWGC	8 cut(s)	317, 564, 676, 788, 943, 955, 1252, 1255
ApoI	RAATTY	1 cut(s)	1096
AsiGI	ACCGGT	1 cut(s)	509
AspLEI	GCGC	1 cut(s)	1276
AspS9I	GGNCC	4 cut(s)	47, 681, 696, 916
AsuC2I	CCSGG	3 cut(s)	391, 643, 1293
AsuHPI	GGTGA	3 cut(s)	50, 544, 897
AsuNHI	GCTAGC	1 cut(s)	98
BanI	GGYRCC	1 cut(s)	1273
BanII	GRGCYC	3 cut(s)	35, 1007, 1058
BbsI	GAAGAC	2 cut(s)	1179, 1344
Bbv12I	GWGCWC	2 cut(s)	35, 1058
BbvI	GCAGC	8 cut(s)	304, 576, 688, 775, 955, 967, 1264, 1267
BccI	CCATC	7 cut(s)	214, 433, 616, 893, 1067, 1207, 1327
BceAI	ACGGC	4 cut(s)	34, 58, 157, 950
BcgI	CGANNNNNNTGC	2 cut(s)	770, 804
BciT130I	CCWGG	2 cut(s)	685, 1001
BcnI	CCSGG	3 cut(s)	391, 643, 1293
BcoDI	GTCTC	2 cut(s)	993, 1017
BcuI	ACTAGT	1 cut(s)	124
BfaI	CTAG	2 cut(s)	99, 125
BfmI	CTRYAG	1 cut(s)	562
BfoI	RGCGCY	1 cut(s)	1277
BfrI	CTTAAG	1 cut(s)	793
Bme1390I	CCNGG	5 cut(s)	391, 643, 685, 1001, 1293
BmgT120I	GGNCC	4 cut(s)	47, 681, 696, 916
BmiI	GGNNCC	3 cut(s)	918, 1006, 1275
BmrFI	CCNGG	5 cut(s)	391, 643, 685, 1001, 1293
BmsI	GCATC	1 cut(s)	911
BmtI	GCTAGC	1 cut(s)	102
BoxI	GACNNNNGTC	2 cut(s)	157, 239
BpiI	GAAGAC	2 cut(s)	1179, 1344
BplI	GAGNNNNNCTC	2 cut(s)	723, 755
BpmI	CTGGAG	1 cut(s)	851
Bpu10I	CCTNAGC	1 cut(s)	34
BpuEI	CTTGAG	1 cut(s)	411
BpuMI	CCSGG	3 cut(s)	391, 643, 1293
BsaHI	GRCGYC	1 cut(s)	1274
BsaJI	CCNNGG	7 cut(s)	81, 390, 642, 683, 684, 759, 1000
BsaWI	WCCGGW	1 cut(s)	509
BsaXI	ACNNNNNCTCC	4 cut(s)	22, 52, 1097, 1127
Bsc4I	CCNNNNNNNGG	7 cut(s)	13, 439, 464, 648, 721, 735, 1001
Bse118I	RCCGGY	2 cut(s)	199, 509
Bse1I	ACTGG	1 cut(s)	321
Bse3DI	GCAATG	2 cut(s)	938, 1193
BseBI	CCWGG	2 cut(s)	685, 1001
BseDI	CCNNGG	7 cut(s)	81, 390, 642, 683, 684, 759, 1000
BseGI	GGATG	2 cut(s)	1175, 1199
BseLI	CCNNNNNNNGG	7 cut(s)	13, 439, 464, 648, 721, 735, 1001
BseMI	GCAATG	2 cut(s)	938, 1193
BseMII	CTCAG	4 cut(s)	48, 170, 506, 1033
BseNI	ACTGG	1 cut(s)	321
BseRI	GAGGAG	3 cut(s)	43, 664, 1204
BseXI	GCAGC	8 cut(s)	304, 576, 688, 775, 955, 967, 1264, 1267
BseYI	CCCAGC	1 cut(s)	1086
Bsh1285I	CGRYCG	2 cut(s)	200, 582
BshFI	GGCC	8 cut(s)	49, 457, 682, 698, 728, 764, 917, 937
BshNI	GGYRCC	1 cut(s)	1273
BshTI	ACCGGT	1 cut(s)	509
BsiEI	CGRYCG	2 cut(s)	200, 582
BsiHKAI	GWGCWC	2 cut(s)	35, 1058
BsiSI	CCGG	8 cut(s)	200, 390, 497, 510, 642, 673, 1292, 1356
BsiWI	CGTACG	1 cut(s)	931
BslFI	GGGAC	3 cut(s)	62, 264, 270
BslI	CCNNNNNNNGG	7 cut(s)	13, 439, 464, 648, 721, 735, 1001
BsmAI	GTCTC	2 cut(s)	993, 1017
BsmFI	GGGAC	3 cut(s)	62, 264, 270
BsnI	GGCC	8 cut(s)	49, 457, 682, 698, 728, 764, 917, 937
Bsp1286I	GDGCHC	3 cut(s)	35, 1007, 1058
Bsp143I	GATC	4 cut(s)	442, 599, 926, 1243
BspANI	GGCC	8 cut(s)	49, 457, 682, 698, 728, 764, 917, 937
BspCNI	CTCAG	4 cut(s)	47, 169, 505, 1032
BspLI	GGNNCC	3 cut(s)	918, 1006, 1275
BspMAI	CTGCAG	1 cut(s)	566
BspOI	GCTAGC	1 cut(s)	102
BspPI	GGATC	3 cut(s)	450, 921, 1251
BspT107I	GGYRCC	1 cut(s)	1273
BspTI	CTTAAG	1 cut(s)	793
BsrDI	GCAATG	2 cut(s)	938, 1193
BsrFI	RCCGGY	2 cut(s)	199, 509
BsrI	ACTGG	1 cut(s)	321
BssAI	RCCGGY	2 cut(s)	199, 509
BssECI	CCNNGG	7 cut(s)	81, 390, 642, 683, 684, 759, 1000
BssMI	GATC	4 cut(s)	442, 599, 926, 1243
BssNI	GRCGYC	1 cut(s)	1274
Bst2UI	CCWGG	2 cut(s)	685, 1001
Bst4CI	ACNGT	5 cut(s)	166, 526, 571, 625, 1332
Bst6I	CTCTTC	2 cut(s)	358, 385
BstACI	GRCGYC	1 cut(s)	1274
BstAFI	CTTAAG	1 cut(s)	793
BstC8I	GCNNGC	3 cut(s)	47, 100, 562
BstDEI	CTNAG	5 cut(s)	34, 156, 492, 1019, 1259
BstDSI	CCRYGG	1 cut(s)	81
BstENI	CCTNNNNNAGG	2 cut(s)	11, 462
BstF5I	GGATG	2 cut(s)	1175, 1199
BstH2I	RGCGCY	1 cut(s)	1277
BstHHI	GCGC	1 cut(s)	1276
BstKTI	GATC	4 cut(s)	445, 602, 929, 1246
BstMAI	GTCTC	2 cut(s)	993, 1017
BstMBI	GATC	4 cut(s)	442, 599, 926, 1243
BstMCI	CGRYCG	2 cut(s)	200, 582
BstMWI	GCNNNNNNNGC	5 cut(s)	590, 764, 773, 943, 952
BstNI	CCWGG	2 cut(s)	685, 1001
BstNSI	RCATGY	2 cut(s)	242, 263
BstPAI	GACNNNNGTC	2 cut(s)	157, 239
BstSCI	CCNGG	5 cut(s)	389, 641, 683, 999, 1291
BstSFI	CTRYAG	1 cut(s)	562
BstV1I	GCAGC	8 cut(s)	304, 576, 688, 775, 955, 967, 1264, 1267
BstV2I	GAAGAC	2 cut(s)	1179, 1344
BsuRI	GGCC	8 cut(s)	49, 457, 682, 698, 728, 764, 917, 937
BtgI	CCRYGG	1 cut(s)	81
BtgZI	GCGATG	1 cut(s)	233
BtsCI	GGATG	2 cut(s)	1175, 1199
BtsI	GCAGTG	1 cut(s)	573
BtsIMutI	CAGTG	2 cut(s)	328, 573
Cac8I	GCNNGC	3 cut(s)	47, 100, 562
CaiI	CAGNNNCTG	1 cut(s)	735
CfoI	GCGC	1 cut(s)	1276
Cfr10I	RCCGGY	2 cut(s)	199, 509
Cfr13I	GGNCC	4 cut(s)	47, 681, 696, 916
CseI	GACGC	1 cut(s)	244
Csp6I	GTAC	3 cut(s)	128, 932, 1114
CspAI	ACCGGT	1 cut(s)	509
CviAII	CATG	2 cut(s)	239, 260
CviQI	GTAC	3 cut(s)	128, 932, 1114
DdeI	CTNAG	5 cut(s)	34, 156, 492, 1019, 1259
DinI	GGCGCC	1 cut(s)	1275
DpnI	GATC	4 cut(s)	444, 601, 928, 1245
DpnII	GATC	4 cut(s)	442, 599, 926, 1243
DrdI	GACNNNNNNGTC	2 cut(s)	74, 147
DseDI	GACNNNNNNGTC	2 cut(s)	74, 147
EaeI	YGGCCR	2 cut(s)	726, 935
Eam1104I	CTCTTC	2 cut(s)	358, 385
EarI	CTCTTC	2 cut(s)	358, 385
EciI	GGCGGA	1 cut(s)	221
Ecl136II	GAGCTC	2 cut(s)	33, 1056
Eco147I	AGGCCT	1 cut(s)	457
Eco24I	GRGCYC	3 cut(s)	35, 1007, 1058
Eco53kI	GAGCTC	2 cut(s)	33, 1056
Eco57I	CTGAAG	3 cut(s)	32, 1034, 1124
EcoICRI	GAGCTC	2 cut(s)	33, 1056
EcoNI	CCTNNNNNAGG	2 cut(s)	11, 462
EcoRII	CCWGG	2 cut(s)	683, 999
EcoT38I	GRGCYC	3 cut(s)	35, 1007, 1058
EgeI	GGCGCC	1 cut(s)	1275
EheI	GGCGCC	1 cut(s)	1275
FaeI	CATG	2 cut(s)	242, 263
FaiI	YATR	9 cut(s)	90, 179, 192, 240, 261, 462, 474, 531, 848
FalI	AAGNNNNNCTT	2 cut(s)	809, 841
FaqI	GGGAC	3 cut(s)	62, 264, 270
FatI	CATG	2 cut(s)	238, 259
FauI	CCCGC	1 cut(s)	38
FblI	GTMKAC	3 cut(s)	151, 161, 196
FokI	GGATG	2 cut(s)	1162, 1186
FriOI	GRGCYC	3 cut(s)	35, 1007, 1058
FspBI	CTAG	2 cut(s)	99, 125
GlaI	GCGC	1 cut(s)	1275
GsaI	CCCAGC	1 cut(s)	1090
GsuI	CTGGAG	1 cut(s)	851
HaeII	RGCGCY	1 cut(s)	1277
HaeIII	GGCC	8 cut(s)	49, 457, 682, 698, 728, 764, 917, 937
HapII	CCGG	8 cut(s)	200, 390, 497, 510, 642, 673, 1292, 1356
HgaI	GACGC	1 cut(s)	244
HhaI	GCGC	1 cut(s)	1276
Hin1I	GRCGYC	1 cut(s)	1274
Hin1II	CATG	2 cut(s)	242, 263
Hin6I	GCGC	1 cut(s)	1274
HinP1I	GCGC	1 cut(s)	1274
HincII	GTYRAC	3 cut(s)	152, 162, 197
HindII	GTYRAC	3 cut(s)	152, 162, 197
HindIII	AAGCTT	1 cut(s)	818
HinfI	GANTC	8 cut(s)	424, 500, 669, 706, 732, 843, 1282, 1288
HpaII	CCGG	8 cut(s)	200, 390, 497, 510, 642, 673, 1292, 1356
HphI	GGTGA	3 cut(s)	50, 544, 897
Hpy166II	GTNNAC	5 cut(s)	85, 152, 162, 197, 893
Hpy188I	TCNGA	6 cut(s)	12, 234, 1022, 1053, 1243, 1287
Hpy188III	TCNNGA	4 cut(s)	249, 710, 868, 1031
Hpy8I	GTNNAC	5 cut(s)	85, 152, 162, 197, 893
Hpy99I	CGWCG	5 cut(s)	71, 74, 153, 785, 1096
HpyAV	CCTTC	2 cut(s)	7, 17
HpyCH4III	ACNGT	5 cut(s)	166, 526, 571, 625, 1332
HpyCH4IV	ACGT	2 cut(s)	72, 148
HpyCH4V	TGCA	6 cut(s)	145, 515, 564, 902, 943, 1156
HpyF10VI	GCNNNNNNNGC	5 cut(s)	590, 764, 773, 943, 952
HpyF3I	CTNAG	5 cut(s)	34, 156, 492, 1019, 1259
HpySE526I	ACGT	2 cut(s)	72, 148
Hsp92I	GRCGYC	1 cut(s)	1274
Hsp92II	CATG	2 cut(s)	242, 263
HspAI	GCGC	1 cut(s)	1274
KasI	GGCGCC	1 cut(s)	1273
Kzo9I	GATC	4 cut(s)	442, 599, 926, 1243
LmnI	GCTCC	5 cut(s)	30, 392, 1010, 1061, 1105
Lsp1109I	GCAGC	8 cut(s)	304, 576, 688, 775, 955, 967, 1264, 1267
LweI	GCATC	1 cut(s)	911
MaeI	CTAG	2 cut(s)	99, 125
MaeII	ACGT	2 cut(s)	72, 148
MaeIII	GTNAC	6 cut(s)	38, 550, 571, 710, 1326, 1337
MalI	GATC	4 cut(s)	444, 601, 928, 1245
MboI	GATC	4 cut(s)	442, 599, 926, 1243
MhlI	GDGCHC	3 cut(s)	35, 1007, 1058
MluCI	AATT	4 cut(s)	107, 1096, 1120, 1127
Mly113I	GGCGCC	1 cut(s)	1274
MlyI	GAGTC	4 cut(s)	418, 678, 741, 852
MmeI	TCCRAC	2 cut(s)	118, 974
MseI	TTAA	2 cut(s)	794, 822
MspA1I	CMGCKG	1 cut(s)	679
MspCI	CTTAAG	1 cut(s)	793
MspI	CCGG	8 cut(s)	200, 390, 497, 510, 642, 673, 1292, 1356
MspR9I	CCNGG	5 cut(s)	391, 643, 685, 1001, 1293
MvaI	CCWGG	2 cut(s)	685, 1001
MwoI	GCNNNNNNNGC	5 cut(s)	590, 764, 773, 943, 952
NarI	GGCGCC	1 cut(s)	1274
NciI	CCSGG	3 cut(s)	391, 643, 1293
NdeII	GATC	4 cut(s)	442, 599, 926, 1243
NheI	GCTAGC	1 cut(s)	98
NlaIII	CATG	2 cut(s)	242, 263
NlaIV	GGNNCC	3 cut(s)	918, 1006, 1275
NmeAIII	GCCGAG	3 cut(s)	720, 727, 784
NmuCI	GTSAC	6 cut(s)	38, 550, 571, 710, 1326, 1337
NspI	RCATGY	2 cut(s)	242, 263
PasI	CCCWGGG	1 cut(s)	684
PceI	AGGCCT	1 cut(s)	457
PciI	ACATGT	1 cut(s)	259
PcsI	WCGNNNNNNNCGW	3 cut(s)	78, 747, 756
PfeI	GAWTC	4 cut(s)	500, 706, 1282, 1288
Pfl23II	CGTACG	1 cut(s)	931
PflFI	GACNNNGTC	1 cut(s)	74
PflMI	CCANNNNNTGG	1 cut(s)	735
PinAI	ACCGGT	1 cut(s)	509
PleI	GAGTC	4 cut(s)	418, 677, 740, 851
PluTI	GGCGCC	1 cut(s)	1277
PpsI	GAGTC	4 cut(s)	418, 677, 740, 851
PscI	ACATGT	1 cut(s)	259
PshAI	GACNNNNGTC	2 cut(s)	157, 239
Psp124BI	GAGCTC	2 cut(s)	35, 1058
Psp6I	CCWGG	2 cut(s)	683, 999
PspFI	CCCAGC	1 cut(s)	1086
PspGI	CCWGG	2 cut(s)	683, 999
PspLI	CGTACG	1 cut(s)	931
PspN4I	GGNNCC	3 cut(s)	918, 1006, 1275
PspPI	GGNCC	4 cut(s)	47, 681, 696, 916
PstI	CTGCAG	1 cut(s)	566
PstNI	CAGNNNCTG	1 cut(s)	735
PsyI	GACNNNGTC	1 cut(s)	74
RsaI	GTAC	3 cut(s)	129, 933, 1115
RsaNI	GTAC	3 cut(s)	128, 932, 1114
SacI	GAGCTC	2 cut(s)	35, 1058
SalI	GTCGAC	3 cut(s)	150, 160, 195
SaqAI	TTAA	2 cut(s)	794, 822
Sau3AI	GATC	4 cut(s)	442, 599, 926, 1243
Sau96I	GGNCC	4 cut(s)	47, 681, 696, 916
SchI	GAGTC	4 cut(s)	418, 678, 741, 852
ScrFI	CCNGG	5 cut(s)	391, 643, 685, 1001, 1293
SduI	GDGCHC	3 cut(s)	35, 1007, 1058
SfaNI	GCATC	1 cut(s)	911
SfcI	CTRYAG	1 cut(s)	562
SfoI	GGCGCC	1 cut(s)	1275
SmlI	CTYRAG	2 cut(s)	426, 793
SmoI	CTYRAG	2 cut(s)	426, 793
SpeI	ACTAGT	1 cut(s)	124
Sse9I	AATT	4 cut(s)	107, 1096, 1120, 1127
SseBI	AGGCCT	1 cut(s)	457
SspDI	GGCGCC	1 cut(s)	1273
SspMI	CTAG	2 cut(s)	99, 125
SstI	GAGCTC	2 cut(s)	35, 1058
StuI	AGGCCT	1 cut(s)	457
StyD4I	CCNGG	5 cut(s)	389, 641, 683, 999, 1291
TaaI	ACNGT	5 cut(s)	166, 526, 571, 625, 1332
TaiI	ACGT	2 cut(s)	75, 151
TaqI	TCGA	5 cut(s)	151, 161, 196, 750, 1062
TaqII	GACCGA	1 cut(s)	290
TasI	AATT	4 cut(s)	107, 1096, 1120, 1127
TatI	WGTACW	2 cut(s)	127, 1113
TauI	GCSGC	7 cut(s)	206, 682, 701, 728, 767, 770, 1279
TfiI	GAWTC	4 cut(s)	500, 706, 1282, 1288
Tru1I	TTAA	2 cut(s)	794, 822
Tru9I	TTAA	2 cut(s)	794, 822
TscAI	CASTG	2 cut(s)	328, 580
TseFI	GTSAC	6 cut(s)	38, 550, 571, 710, 1326, 1337
TseI	GCWGC	8 cut(s)	317, 564, 676, 788, 943, 955, 1252, 1255
Tsp45I	GTSAC	6 cut(s)	38, 550, 571, 710, 1326, 1337
TspDTI	ATGAA	3 cut(s)	546, 1212, 1290
TspGWI	ACGGA	1 cut(s)	919
TspRI	CASTG	2 cut(s)	328, 580
Tth111I	GACNNNGTC	1 cut(s)	74
Van91I	CCANNNNNTGG	1 cut(s)	735
Vha464I	CTTAAG	1 cut(s)	793
XagI	CCTNNNNNAGG	2 cut(s)	11, 462
XapI	RAATTY	1 cut(s)	1096
XceI	RCATGY	2 cut(s)	242, 263
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1320
XmiI	GTMKAC	3 cut(s)	151, 161, 196
XspI	CTAG	2 cut(s)	99, 125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.