RchiOBHm_Chr6g0290821

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0016561
Physical Location & Seq
Forward (+)
53799992 .. 53801493
1502 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26093

Sequence Viewer

Length: 972 bp
ATGGCGAGCAGTGGCAGTGGGCAACAACTGCCGCCGTACAACCCTTACCGGCACCTGAAGACTCTTCGCGGCCACGAGAGCGCCGTGTCGTGCGTCAAATTCTCCAACGACGGAACCCTCTTGGCCTCGGCGTCGTTAGATAAGACCGTGATCCTCTGGTGGTCTTCCACCCTAGCCCTCCTGCGCCGCCTGGAGGGACACTCCGAGGGCATCTCCGACCTTTCCTGGTCCTCCGACTCCCACTACATCTGCTCCGCCTCCGACGACTGCACCCTCCGCATCTGGGACGCACGCTCCCCCACCGGCGAGTGCGTCAAGACTCTCCGCGGCCACTCCGACCTCGTTTTCTGCGCCAACTTCAACCCCCAGTCCAACCTCATCGTCTCCGGCTCGTTCGACGAGACGATTCGGATTTGGGAGGCCAAGACCGGCAAGTGCCTCCACGTCATCAGGGCCCACTCGCTTCCGGTGACCTCCGTGAGCTTCAATCGCGATGGGTCGCTCATCGTCTCCGCCAGTCACGACGGGTCGTGCAAGATTTGGGACACCGCTAAAGGGACCTGCTTGAAAACCCTAATTGACGATAAGGTCCCTGCCGTTTCCTTCGCCAAGTTCTCCCCCAACGGAAAATTCATACTCATCGCCACTCTAGATAATACCCTTAAGCTGTGCAACTACTCGACGGGAAAGTTCTTGAAGGTCTATACGGGGCATTTGAACAAAGTGTATTGCATAACATCTACATTTTCTGTGACAAATGGGAAATATATTGTTAGTGGTTCCGAGGATCACTGTGTATACTTGTGGGATCTTCAGTTGAAAACTATGATTCAGAGATTTGAAGGCCATACTGATACCGTCATCTCTGTTTCGTGTCACCCGTCGGAGAATAAGATTGCCTCCGCAGCTCTCCAAAATGATAAGACTGTCCGGATCTGGGTTCAAGATAATGCCAATTCAGCTCCTAAATGA

Protein Analysis

323

Amino Acids

35.52

Weight (kDa)

8.39

Isoelectric Point (pI)

32.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_MABP1-WDR62_2nd PF24782 15 - 181 1e-12 MABP1/WDR62 second WD40 domain
WD40_Gbeta PF25391 17 - 313 2.9e-27 G protein beta WD-40 repeat protein
WDR55 PF24796 17 - 144 4.6e-16 WDR55
Beta-prop_EML_2 PF23414 17 - 99 9.5e-14 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd PF25047 17 - 99 3.2e-11 TEP-1 second beta-propeller
Beta-prop_WDR3_2nd PF25172 17 - 141 1e-20 WDR3 second beta-propeller domain
WD40 PF00400 18 - 53 3.4e-11 WD domain, G-beta repeat
WD40_Prp19 PF24814 18 - 99 3.8e-12 Prp19 WD40 domain
Beta-prop_IFT122_1st PF23381 19 - 88 1.8e-07 IFT122 first beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 20 - 98 4.4e-10 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_1st PF25173 20 - 98 3.1e-19 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 21 - 313 1.2e-132 WDR5 beta-propeller domain
EIF3I PF24805 21 - 108 2.6e-13 EIF3I
Beta-prop_EML PF23409 23 - 129 3.7e-08 Echinoderm microtubule-associated protein first beta-propeller
WD40_WDHD1_1st PF24817 24 - 81 7.3e-07 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 25 - 99 2.2e-18 THOC3 beta-propeller domain
Beta-prop_Aladin PF25460 25 - 111 1.8e-08 Aladin seven-bladed propeller
Beta-prop_WDR36-Utp21_2nd PF25168 25 - 98 3.3e-11 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR19_1st PF23389 26 - 156 8.1e-07 WDR19 first beta-propeller
Beta-prop_TEP1_2nd PF25047 58 - 184 8.6e-13 TEP-1 second beta-propeller
WD40 PF00400 60 - 96 4.9e-11 WD domain, G-beta repeat
WD40_MABP1-WDR62_1st PF24780 68 - 170 1.5e-07 MABP1/WDR62 first WD40 domain
WDR90_beta-prop_4th PF23342 72 - 200 4.2e-08 WDR90, 4th beta-propeller
WD40_WDHD1_1st PF24817 73 - 150 6.3e-12 WDHD1 first WD40 domain
Beta-prop_WDR75_1st PF23869 77 - 140 9.9e-08 WD repeat-containing protein 75 first beta-propeller
Beta-prop_EIPR1 PF23609 79 - 139 2e-07 EIPR1 beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 83 - 187 1.1e-08 WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 85 - 223 9.4e-12 WDR36/Utp21 first beta-propeller
Beta-prop_THOC3 PF25174 100 - 197 4.4e-22 THOC3 beta-propeller domain
EIF3I PF24805 101 - 168 1.2e-10 EIF3I
WD40_Prp19 PF24814 101 - 272 2.6e-32 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 101 - 198 1.9e-22 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 102 - 165 9.9e-06 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 102 - 139 1.7e-10 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 104 - 200 4e-13 CAF1B/HIR1 beta-propeller domain
Beta-prop_Aladin PF25460 104 - 219 1.1e-09 Aladin seven-bladed propeller
Beta-prop_TEP1_2nd PF25047 104 - 196 2.2e-10 TEP-1 second beta-propeller
WDR55 PF24796 114 - 191 8.4e-09 WDR55
WD40_WDHD1_1st PF24817 115 - 280 3e-24 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 120 - 245 7.4e-16 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_SCAP PF24017 127 - 278 3.6e-08 SCAP Beta-propeller
Beta-prop_EML PF23409 134 - 216 3.3e-07 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 144 - 182 7.9e-12 WD domain, G-beta repeat
NBCH_WD40 PF20426 146 - 301 2e-07 Neurobeachin beta propeller domain
Beta-prop_Aladin PF25460 146 - 226 9.3e-08 Aladin seven-bladed propeller
Beta-prop_WDR3_2nd PF25172 147 - 202 8.1e-07 WDR3 second beta-propeller domain
EIF3I PF24805 150 - 234 6.6e-08 EIF3I
Beta-prop_WDR36-Utp21_2nd PF25168 152 - 315 7.2e-13 WDR36/Utp21 second beta-propeller domain
Beta-prop_ACSF4 PF13570 161 - 305 1.9e-07 Beta-alanine-activating enzyme, beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 169 - 316 1.1e-09 WDR36/Utp21 first beta-propeller
Beta-prop_TEP1_2nd PF25047 197 - 314 8.2e-09 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 198 - 314 1.8e-16 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 199 - 318 1.9e-14 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_2nd PF25172 200 - 317 7.6e-13 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 202 - 274 2.8e-11 THOC3 beta-propeller domain
WDR55 PF24796 203 - 302 3.1e-09 WDR55
EIF3I PF24805 203 - 304 8.3e-06 EIF3I
Beta-prop_IFT122_1st PF23381 205 - 303 1.6e-07 IFT122 first beta-propeller
WD40_MABP1-WDR62_2nd PF24782 205 - 271 3.7e-06 MABP1/WDR62 second WD40 domain
WD40_WDHD1_1st PF24817 209 - 319 6.5e-12 WDHD1 first WD40 domain
Beta-prop_EML PF23409 228 - 299 3.9e-06 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 229 - 270 2.2e-07 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 231 - 316 1.6e-07 CAF1B/HIR1 beta-propeller domain
WD40_MABP1-WDR62_1st PF24780 248 - 314 1.3e-06 MABP1/WDR62 first WD40 domain
WD40_Prp19 PF24814 251 - 319 2.8e-10 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 253 - 316 5.6e-12 THOC3 beta-propeller domain
WD40 PF00400 276 - 313 3.3e-06 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016561)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02730
fragaria_vesca FvH4_2g23370
malus_domestica MD03G1263200.v1.1
prunus_persica Prupe.8G239500_v2.0.a1
pyrus_communis pycom03g21070
rosa_chinensis RchiOBHm_Chr6g0290821
rosa_laevigata RLG00000012171
rosa_multiflora Rmu_ssc0000069.1_g000002
rosa_roxburghii Rroxscaffold_7G00176710
rosa_rugosa Rorug06G0214900
rosa_samantha Rh6BG333200 Rh6CG338900 Rh6DG326300
rosa_wichuraiana Rw6G028300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 587
Acc36I ACCTGC 1 cut(s) 569
AccB1I GGYRCC 1 cut(s) 51
AccI GTMKAC 1 cut(s) 798
AccII CGCG 3 cut(s) 69, 327, 492
AccIII TCCGGA 1 cut(s) 930
AclWI GGATC 4 cut(s) 145, 795, 816, 941
AcoI YGGCCR 2 cut(s) 70, 328
AcsI RAATTY 2 cut(s) 98, 629
AcuI CTGAAG 2 cut(s) 77, 797
AcyI GRCGYC 1 cut(s) 131
AfaI GTAC 1 cut(s) 38
AfiI CCNNNNNNNGG 4 cut(s) 193, 283, 555, 937
AflII CTTAAG 1 cut(s) 662
AgsI TTSAA 8 cut(s) 361, 487, 568, 697, 718, 820, 842, 944
AjiI CACGTC 1 cut(s) 445
AjnI CCWGG 2 cut(s) 189, 224
AjuI GAANNNNNNNTTGG 2 cut(s) 614, 646
AluBI AGCT 4 cut(s) 483, 667, 908, 962
AluI AGCT 4 cut(s) 483, 667, 908, 962
Alw26I GTCTC 3 cut(s) 388, 395, 514
AlwI GGATC 4 cut(s) 145, 795, 816, 941
Aor13HI TCCGGA 1 cut(s) 930
AoxI GGCC 6 cut(s) 70, 123, 328, 420, 453, 844
ApaI GGGCCC 1 cut(s) 457
ApeKI GCWGC 1 cut(s) 905
ApoI RAATTY 2 cut(s) 98, 629
AspLEI GCGC 3 cut(s) 83, 186, 353
AspS9I GGNCC 5 cut(s) 228, 453, 454, 558, 589
AsuHPI GGTGA 2 cut(s) 481, 869
AvaII GGWCC 3 cut(s) 228, 558, 589
BaeGI GKGCMC 1 cut(s) 457
BanI GGYRCC 1 cut(s) 51
BanII GRGCYC 1 cut(s) 457
BauI CACGAG 1 cut(s) 74
BbsI GAAGAC 2 cut(s) 65, 156
BbvI GCAGC 1 cut(s) 917
BccI CCATC 1 cut(s) 488
BceAI ACGGC 3 cut(s) 19, 68, 581
BciT130I CCWGG 2 cut(s) 191, 226
BcoDI GTCTC 3 cut(s) 388, 395, 514
BfaI CTAG 2 cut(s) 173, 650
BfoI RGCGCY 1 cut(s) 84
BfrI CTTAAG 1 cut(s) 662
BfuAI ACCTGC 1 cut(s) 569
BisI GCNGC 5 cut(s) 32, 70, 187, 328, 906
BlsI GCNGC 5 cut(s) 33, 71, 188, 329, 907
Bme1390I CCNGG 2 cut(s) 191, 226
Bme18I GGWCC 3 cut(s) 228, 558, 589
BmgBI CACGTC 1 cut(s) 445
BmgT120I GGNCC 5 cut(s) 228, 453, 454, 558, 589
BmiI GGNNCC 6 cut(s) 53, 115, 455, 559, 591, 781
BmrFI CCNGG 2 cut(s) 191, 226
BmrI ACTGGG 1 cut(s) 361
BmsI GCATC 2 cut(s) 219, 288
BmuI ACTGGG 1 cut(s) 361
BpiI GAAGAC 2 cut(s) 65, 156
BplI GAGNNNNNCTC 4 cut(s) 185, 217, 197, 229
BpmI CTGGAG 1 cut(s) 212
BsaHI GRCGYC 1 cut(s) 131
BsaJI CCNNGG 4 cut(s) 126, 204, 325, 783
BsaWI WCCGGW 2 cut(s) 466, 930
BsaXI ACNNNNNCTCC 4 cut(s) 236, 266, 278, 308
Bsc4I CCNNNNNNNGG 4 cut(s) 193, 283, 555, 937
Bse118I RCCGGY 3 cut(s) 48, 302, 428
Bse1I ACTGG 2 cut(s) 367, 516
BseAI TCCGGA 1 cut(s) 930
BseBI CCWGG 2 cut(s) 191, 226
BseDI CCNNGG 4 cut(s) 126, 204, 325, 783
BseLI CCNNNNNNNGG 4 cut(s) 193, 283, 555, 937
BseNI ACTGG 2 cut(s) 367, 516
BseSI GKGCMC 1 cut(s) 457
BseXI GCAGC 1 cut(s) 917
BsgI GTGCAG 1 cut(s) 253
Bsh1236I CGCG 3 cut(s) 69, 327, 492
BshFI GGCC 6 cut(s) 72, 125, 330, 422, 455, 846
BshNI GGYRCC 1 cut(s) 51
BsiSI CCGG 6 cut(s) 49, 303, 387, 429, 467, 931
BslFI GGGAC 5 cut(s) 210, 299, 557, 571, 575
BslI CCNNNNNNNGG 4 cut(s) 193, 283, 555, 937
BsmAI GTCTC 3 cut(s) 388, 395, 514
BsmBI CGTCTC 3 cut(s) 388, 395, 514
BsmFI GGGAC 5 cut(s) 210, 299, 557, 571, 575
BsnI GGCC 6 cut(s) 72, 125, 330, 422, 455, 846
Bsp120I GGGCCC 1 cut(s) 453
Bsp1286I GDGCHC 1 cut(s) 457
Bsp13I TCCGGA 1 cut(s) 930
Bsp143I GATC 4 cut(s) 150, 787, 808, 933
Bsp68I TCGCGA 1 cut(s) 492
BspANI GGCC 6 cut(s) 72, 125, 330, 422, 455, 846
BspEI TCCGGA 1 cut(s) 930
BspFNI CGCG 3 cut(s) 69, 327, 492
BspLI GGNNCC 6 cut(s) 53, 115, 455, 559, 591, 781
BspMI ACCTGC 1 cut(s) 569
BspPI GGATC 4 cut(s) 145, 795, 816, 941
BspT107I GGYRCC 1 cut(s) 51
BspTI CTTAAG 1 cut(s) 662
BsrFI RCCGGY 3 cut(s) 48, 302, 428
BsrI ACTGG 2 cut(s) 367, 516
BssAI RCCGGY 3 cut(s) 48, 302, 428
BssECI CCNNGG 4 cut(s) 126, 204, 325, 783
BssMI GATC 4 cut(s) 150, 787, 808, 933
BssNAI GTATAC 1 cut(s) 799
BssNI GRCGYC 1 cut(s) 131
BssSI CACGAG 1 cut(s) 74
Bst1107I GTATAC 1 cut(s) 799
Bst2BI CACGAG 1 cut(s) 74
Bst2UI CCWGG 2 cut(s) 191, 226
Bst4CI ACNGT 4 cut(s) 148, 794, 859, 928
Bst6I CTCTTC 1 cut(s) 69
BstACI GRCGYC 1 cut(s) 131
BstAFI CTTAAG 1 cut(s) 662
BstAPI GCANNNNNTGC 1 cut(s) 28
BstC8I GCNNGC 2 cut(s) 7, 292
BstDSI CCRYGG 1 cut(s) 325
BstEII GGTNACC 1 cut(s) 469
BstFNI CGCG 3 cut(s) 69, 327, 492
BstH2I RGCGCY 1 cut(s) 84
BstHHI GCGC 3 cut(s) 83, 186, 353
BstKTI GATC 4 cut(s) 153, 790, 811, 936
BstMAI GTCTC 3 cut(s) 388, 395, 514
BstMBI GATC 4 cut(s) 150, 787, 808, 933
BstMWI GCNNNNNNNGC 6 cut(s) 28, 78, 276, 489, 905, 959
BstNI CCWGG 2 cut(s) 191, 226
BstPI GGTNACC 1 cut(s) 469
BstSCI CCNGG 2 cut(s) 189, 224
BstSLI GKGCMC 1 cut(s) 457
BstUI CGCG 3 cut(s) 69, 327, 492
BstV1I GCAGC 1 cut(s) 917
BstV2I GAAGAC 2 cut(s) 65, 156
BstX2I RGATCY 2 cut(s) 808, 933
BstYI RGATCY 2 cut(s) 808, 933
BstZ17I GTATAC 1 cut(s) 799
BsuRI GGCC 6 cut(s) 72, 125, 330, 422, 455, 846
BtgI CCRYGG 1 cut(s) 325
BtgZI GCGATG 2 cut(s) 507, 625
BtrI CACGTC 1 cut(s) 445
BtsI GCAGTG 2 cut(s) 16, 22
BtsIMutI CAGTG 3 cut(s) 16, 22, 790
BtuMI TCGCGA 1 cut(s) 492
BveI ACCTGC 1 cut(s) 569
Cac8I GCNNGC 2 cut(s) 7, 292
CfoI GCGC 3 cut(s) 83, 186, 353
Cfr10I RCCGGY 3 cut(s) 48, 302, 428
Cfr13I GGNCC 5 cut(s) 228, 453, 454, 558, 589
Cfr42I CCGCGG 1 cut(s) 328
CseI GACGC 4 cut(s) 82, 120, 296, 301
Csp6I GTAC 1 cut(s) 37
CviQI GTAC 1 cut(s) 37
DpnI GATC 4 cut(s) 152, 789, 810, 935
DpnII GATC 4 cut(s) 150, 787, 808, 933
DrdI GACNNNNNNGTC 1 cut(s) 587
DseDI GACNNNNNNGTC 1 cut(s) 587
EaeI YGGCCR 2 cut(s) 70, 328
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
EciI GGCGGA 2 cut(s) 244, 502
Eco24I GRGCYC 1 cut(s) 457
Eco47I GGWCC 3 cut(s) 228, 558, 589
Eco57I CTGAAG 2 cut(s) 77, 797
Eco91I GGTNACC 1 cut(s) 469
EcoO109I RGGNCCY 3 cut(s) 453, 558, 589
EcoO65I GGTNACC 1 cut(s) 469
EcoRII CCWGG 2 cut(s) 189, 224
EcoT38I GRGCYC 1 cut(s) 457
Esp3I CGTCTC 3 cut(s) 388, 395, 514
FaiI YATR 7 cut(s) 635, 705, 734, 768, 799, 827, 849
FaqI GGGAC 5 cut(s) 210, 299, 557, 571, 575
FblI GTMKAC 1 cut(s) 798
Fnu4HI GCNGC 5 cut(s) 32, 70, 187, 328, 906
FriOI GRGCYC 1 cut(s) 457
Fsp4HI GCNGC 5 cut(s) 32, 70, 187, 328, 906
FspBI CTAG 2 cut(s) 173, 650
GlaI GCGC 3 cut(s) 82, 185, 352
GluI GCNGC 5 cut(s) 32, 70, 187, 328, 906
GsuI CTGGAG 1 cut(s) 212
HaeII RGCGCY 1 cut(s) 84
HaeIII GGCC 6 cut(s) 72, 125, 330, 422, 455, 846
HapII CCGG 6 cut(s) 49, 303, 387, 429, 467, 931
HgaI GACGC 4 cut(s) 82, 120, 296, 301
HhaI GCGC 3 cut(s) 83, 186, 353
Hin1I GRCGYC 1 cut(s) 131
Hin6I GCGC 3 cut(s) 81, 184, 351
HinP1I GCGC 3 cut(s) 81, 184, 351
HinfI GANTC 5 cut(s) 61, 236, 319, 406, 829
HpaII CCGG 6 cut(s) 49, 303, 387, 429, 467, 931
HphI GGTGA 2 cut(s) 481, 869
Hpy166II GTNNAC 1 cut(s) 799
Hpy188I TCNGA 9 cut(s) 205, 217, 235, 262, 337, 411, 784, 834, 886
Hpy188III TCNNGA 7 cut(s) 316, 491, 521, 650, 694, 931, 944
Hpy8I GTNNAC 1 cut(s) 799
Hpy99I CGWCG 7 cut(s) 113, 136, 266, 401, 527, 685, 886
HpyAV CCTTC 3 cut(s) 613, 691, 836
HpyCH4III ACNGT 4 cut(s) 148, 794, 859, 928
HpyCH4IV ACGT 1 cut(s) 444
HpyCH4V TGCA 4 cut(s) 270, 534, 672, 732
HpyF10VI GCNNNNNNNGC 6 cut(s) 28, 78, 276, 489, 905, 959
HpySE526I ACGT 1 cut(s) 444
Hsp92I GRCGYC 1 cut(s) 131
HspAI GCGC 3 cut(s) 81, 184, 351
Kpn2I TCCGGA 1 cut(s) 930
KspI CCGCGG 1 cut(s) 328
Kzo9I GATC 4 cut(s) 150, 787, 808, 933
LmnI GCTCC 3 cut(s) 257, 299, 967
Lsp1109I GCAGC 1 cut(s) 917
LweI GCATC 2 cut(s) 219, 288
MaeI CTAG 2 cut(s) 173, 650
MaeII ACGT 1 cut(s) 444
MaeIII GTNAC 4 cut(s) 469, 518, 751, 875
MalI GATC 4 cut(s) 152, 789, 810, 935
MboI GATC 4 cut(s) 150, 787, 808, 933
MboII GAAGA 4 cut(s) 56, 70, 156, 803
MflI RGATCY 2 cut(s) 808, 933
MhlI GDGCHC 1 cut(s) 457
MluCI AATT 4 cut(s) 98, 576, 629, 955
MlyI GAGTC 3 cut(s) 55, 230, 313
MmeI TCCRAC 7 cut(s) 129, 240, 258, 285, 360, 396, 864
MroI TCCGGA 1 cut(s) 930
MseI TTAA 1 cut(s) 663
MspA1I CMGCKG 1 cut(s) 327
MspCI CTTAAG 1 cut(s) 662
MspI CCGG 6 cut(s) 49, 303, 387, 429, 467, 931
MspR9I CCNGG 2 cut(s) 191, 226
MvaI CCWGG 2 cut(s) 191, 226
MvnI CGCG 3 cut(s) 69, 327, 492
MwoI GCNNNNNNNGC 6 cut(s) 28, 78, 276, 489, 905, 959
NdeII GATC 4 cut(s) 150, 787, 808, 933
NlaIV GGNNCC 6 cut(s) 53, 115, 455, 559, 591, 781
NmeAIII GCCGAG 1 cut(s) 107
NmuCI GTSAC 4 cut(s) 469, 518, 751, 875
NruI TCGCGA 1 cut(s) 492
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 878
PfeI GAWTC 2 cut(s) 406, 829
PkrI GCNGC 5 cut(s) 33, 71, 188, 329, 907
PleI GAGTC 3 cut(s) 55, 230, 313
PpsI GAGTC 3 cut(s) 55, 230, 313
PpuMI RGGWCCY 2 cut(s) 558, 589
Psp5II RGGWCCY 2 cut(s) 558, 589
Psp6I CCWGG 2 cut(s) 189, 224
PspEI GGTNACC 1 cut(s) 469
PspGI CCWGG 2 cut(s) 189, 224
PspN4I GGNNCC 6 cut(s) 53, 115, 455, 559, 591, 781
PspOMI GGGCCC 1 cut(s) 453
PspPI GGNCC 5 cut(s) 228, 453, 454, 558, 589
PspPPI RGGWCCY 2 cut(s) 558, 589
PsuI RGATCY 2 cut(s) 808, 933
RruI TCGCGA 1 cut(s) 492
RsaI GTAC 1 cut(s) 38
RsaNI GTAC 1 cut(s) 37
SacII CCGCGG 1 cut(s) 328
SaqAI TTAA 1 cut(s) 663
SatI GCNGC 5 cut(s) 32, 70, 187, 328, 906
Sau3AI GATC 4 cut(s) 150, 787, 808, 933
Sau96I GGNCC 5 cut(s) 228, 453, 454, 558, 589
SchI GAGTC 3 cut(s) 55, 230, 313
ScrFI CCNGG 2 cut(s) 191, 226
SduI GDGCHC 1 cut(s) 457
SfaNI GCATC 2 cut(s) 219, 288
Sfr303I CCGCGG 1 cut(s) 328
SgrAI CRCCGGYG 1 cut(s) 302
SgrBI CCGCGG 1 cut(s) 328
SinI GGWCC 3 cut(s) 228, 558, 589
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
Sse9I AATT 4 cut(s) 98, 576, 629, 955
SspMI CTAG 2 cut(s) 173, 650
StyD4I CCNGG 2 cut(s) 189, 224
TaaI ACNGT 4 cut(s) 148, 794, 859, 928
TaiI ACGT 1 cut(s) 447
TaqI TCGA 2 cut(s) 396, 680
TasI AATT 4 cut(s) 98, 576, 629, 955
TauI GCSGC 4 cut(s) 34, 72, 189, 330
TfiI GAWTC 2 cut(s) 406, 829
Tru1I TTAA 1 cut(s) 663
Tru9I TTAA 1 cut(s) 663
TscAI CASTG 3 cut(s) 16, 22, 797
TseFI GTSAC 4 cut(s) 469, 518, 751, 875
TseI GCWGC 1 cut(s) 905
Tsp45I GTSAC 4 cut(s) 469, 518, 751, 875
TspDTI ATGAA 1 cut(s) 622
TspGWI ACGGA 3 cut(s) 126, 466, 639
TspRI CASTG 3 cut(s) 16, 22, 797
Vha464I CTTAAG 1 cut(s) 662
VpaK11BI GGWCC 3 cut(s) 228, 558, 589
XapI RAATTY 2 cut(s) 98, 629
XbaI TCTAGA 1 cut(s) 649
XmiI GTMKAC 1 cut(s) 798
XspI CTAG 2 cut(s) 173, 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.