Rh6DG326300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0016561
Physical Location & Seq
Forward (+)
53065904 .. 53068620
2717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG326300.1

Sequence Viewer

Length: 1095 bp
ATGGCGAGCAGTGGCAGTGGGCAACAACTGCCGCCGTACAACCCTTACCGGCACGTGAAGACCCTTCGCGGCCACGAGAGCGCCGTGTCGTGCGTCAAATTCTCCAACGACGGAACCCTCTTGGCCTCGGCGTCGTTAGACAAGACCGTGATCCTCTGGTCGTCTTCCACCCTAGCCCTCCTGCGCCGCCTGGTGGGACACTCCGAGGGCATCTCCGACCTTTCCTGGTCCTCCGACTCCCACTACATCTGCTCCGCCTCCGACGACCGCACCCTCCGCATCTGGGACGCACTCTCCCCCACCGGCGAGTGCGTCAAGACCCTCCGCGGCCACTCCGACCTCGTTTTCTGCGCCAACTTCAACCCCCAGTCCAACCTCATCGTCTCCGGCTCGTTCGACGAGACGATTCGGATTTGGGAGGTCAAGACCGGCAAGTGCCTCCACGTCATCAGGGCCCACTCGCTTCCGGTGACCTCCGTGAGCTTCAATCGCGATGGGTCGCTCATCGTCTCCGCCAGTCACGACGGGTCGTGCAAGATTTGGGACACCGCTAAAGGGACCTGCTTGAAAACCCTAATTGACGATAAGGTCCCTGCCGTTTCCTCCGCCAAGTTCTCCCCCAACGGAAAATTCATACTCATCGCCACTCTAGATAATACCCTTAAGCTGTGCAACTACTCGACGGGGAAGTTCTTGAAGGTCTATACGGGGCATTTGAACAAAGTCAAGAATGTTGTTTTCGGTAGCAAATCAGTTGATCCGAAGGAGTCCCAGTTCTTTGATGAAGATGGAGCTGTGGATGACATGGATGGCTACATGAACTTCCTTTCTCTTGAATATGACTCCGTTTGGGACACTAAACCTTCCTGGTGCCAACCATGGACAATAACACTGACCGGAGTGCTAGTGATTGCGTTTAGCTGGCTGATTTTGCACTCAGTATTAGCCACAGGCGTTGTAGTCTTCCTAATTGGCTTATGGTGGTACATCTTTCTGTATTCATACCCAAAGGCGTATGCAGATATGATTGCCGAGCGGAGGAAGAGGGTGTCCAACGGTGTTGAAGACACCTTTGGAATGGGGGAGACGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

364

Amino Acids

40.27

Weight (kDa)

7.12

Isoelectric Point (pI)

30.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_MABP1-WDR62_2nd PF24782 15 - 181 5.6e-16 MABP1/WDR62 second WD40 domain
Beta-prop_EML_2 PF23414 17 - 98 1.1e-13 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 17 - 97 1.6e-10 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 17 - 140 2.6e-21 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 17 - 97 1.9e-18 THOC3 beta-propeller domain
WD40_Gbeta PF25391 17 - 236 1.5e-22 G protein beta WD-40 repeat protein
WDR55 PF24796 17 - 145 3.3e-14 WDR55
WD40 PF00400 18 - 54 1.5e-11 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 18 - 97 2.2e-11 TEP-1 second beta-propeller
Beta-prop_IFT122_1st PF23381 19 - 88 2e-07 IFT122 first beta-propeller
Beta-prop_WDR3_1st PF25173 20 - 97 1.3e-19 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 21 - 242 4.5e-100 WDR5 beta-propeller domain
EIF3I PF24805 21 - 106 4.7e-11 EIF3I
Beta-prop_EML PF23409 23 - 129 3.4e-08 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_Aladin PF25460 25 - 110 1e-07 Aladin seven-bladed propeller
Beta-prop_WDR36-Utp21_2nd PF25168 58 - 98 1.9e-06 WDR36/Utp21 second beta-propeller domain
WD40_CDC20-Fz PF24807 60 - 154 1.9e-13 CDC20/Fizzy WD40 domain
WD40 PF00400 60 - 96 2.1e-10 WD domain, G-beta repeat
WD40_MABP1-WDR62_1st PF24780 69 - 172 1.7e-07 MABP1/WDR62 first WD40 domain
WDR90_beta-prop_4th PF23342 72 - 201 2.6e-08 WDR90, 4th beta-propeller
Beta-prop_WDR75_1st PF23869 77 - 142 1.9e-07 WD repeat-containing protein 75 first beta-propeller
WD40_WDHD1_1st PF24817 79 - 150 8.1e-11 WDHD1 first WD40 domain
Beta-prop_WDR90_POC16_2nd PF23393 83 - 187 1.2e-09 WDR90/POC16, second beta-propeller
Beta-prop_SCAP PF24017 84 - 189 2.8e-07 SCAP Beta-propeller
Beta-prop_THOC3 PF25174 100 - 192 1e-21 THOC3 beta-propeller domain
EIF3I PF24805 101 - 153 3.2e-09 EIF3I
Beta-prop_Aladin PF25460 101 - 220 3e-11 Aladin seven-bladed propeller
Beta-prop_WDR3_1st PF25173 101 - 223 7.5e-26 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 101 - 248 9.8e-27 Prp19 WD40 domain
Beta-prop_WDR36-Utp21_1st PF25171 101 - 223 3.3e-11 WDR36/Utp21 first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 102 - 162 8.8e-06 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 102 - 139 2e-10 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 104 - 226 7.5e-12 TEP-1 second beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 104 - 237 1.8e-14 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML PF23409 110 - 222 2.1e-10 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_ACSF4 PF13570 117 - 236 1.1e-06 Beta-alanine-activating enzyme, beta-propeller
Beta-prop_EML_2 PF23414 120 - 247 6e-16 Echinoderm microtubule-associated protein second beta-propeller
WDR55 PF24796 124 - 183 3e-08 WDR55
WD40_MABP1-WDR62_1st PF24780 139 - 223 9.5e-06 MABP1/WDR62 first WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 143 - 219 9.8e-07 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 144 - 182 9.3e-12 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 147 - 263 1.3e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 147 - 193 3.5e-06 WDR3 second beta-propeller domain
WD40_WDHD1_1st PF24817 149 - 192 2.8e-07 WDHD1 first WD40 domain
EIF3I PF24805 150 - 248 1.9e-09 EIF3I
Beta-prop_THOC3 PF25174 171 - 245 6.6e-09 THOC3 beta-propeller domain
DUF6737 PF20522 282 - 338 1.5e-26 Domain of unknown function (DUF6737)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0016561)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02730
fragaria_vesca FvH4_2g23370
malus_domestica MD03G1263200.v1.1
prunus_persica Prupe.8G239500_v2.0.a1
pyrus_communis pycom03g21070
rosa_chinensis RchiOBHm_Chr6g0290821
rosa_laevigata RLG00000012171
rosa_multiflora Rmu_ssc0000069.1_g000002
rosa_roxburghii Rroxscaffold_7G00176710
rosa_rugosa Rorug06G0214900
rosa_samantha Rh6BG333200 Rh6CG338900 Rh6DG326300
rosa_wichuraiana Rw6G028300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 587
Acc36I ACCTGC 1 cut(s) 569
AccB1I GGYRCC 1 cut(s) 870
AccBSI CCGCTC 1 cut(s) 1036
AccII CGCG 4 cut(s) 69, 327, 492, 1090
AclWI GGATC 2 cut(s) 145, 752
AcoI YGGCCR 2 cut(s) 70, 328
AcsI RAATTY 2 cut(s) 98, 629
AcvI CACGTG 1 cut(s) 55
AcyI GRCGYC 1 cut(s) 131
AfaI GTAC 2 cut(s) 38, 986
AfiI CCNNNNNNNGG 4 cut(s) 193, 283, 555, 1038
AflII CTTAAG 1 cut(s) 662
AgsI TTSAA 7 cut(s) 361, 487, 568, 697, 718, 836, 1064
AjiI CACGTC 1 cut(s) 445
AjnI CCWGG 3 cut(s) 189, 224, 866
AjuI GAANNNNNNNTTGG 4 cut(s) 614, 646, 1056, 1088
AloI GAACNNNNNNTCC 2 cut(s) 758, 790
AluBI AGCT 4 cut(s) 483, 667, 794, 921
AluI AGCT 4 cut(s) 483, 667, 794, 921
Alw26I GTCTC 4 cut(s) 388, 395, 514, 1079
AlwI GGATC 2 cut(s) 145, 752
AoxI GGCC 4 cut(s) 70, 123, 328, 453
ApaI GGGCCC 1 cut(s) 457
ApoI RAATTY 2 cut(s) 98, 629
AspLEI GCGC 3 cut(s) 83, 186, 353
AspS9I GGNCC 5 cut(s) 228, 453, 454, 558, 589
AsuHPI GGTGA 1 cut(s) 481
AvaII GGWCC 3 cut(s) 228, 558, 589
BaeGI GKGCMC 1 cut(s) 457
BanI GGYRCC 1 cut(s) 870
BanII GRGCYC 1 cut(s) 457
BauI CACGAG 1 cut(s) 74
BbrPI CACGTG 1 cut(s) 55
BbsI GAAGAC 4 cut(s) 65, 156, 955, 1071
BccI CCATC 3 cut(s) 488, 782, 803
BceAI ACGGC 3 cut(s) 19, 68, 581
BciT130I CCWGG 3 cut(s) 191, 226, 868
BcoDI GTCTC 4 cut(s) 388, 395, 514, 1079
BfaI CTAG 3 cut(s) 173, 650, 905
BfoI RGCGCY 1 cut(s) 84
BfrI CTTAAG 1 cut(s) 662
BfuAI ACCTGC 1 cut(s) 569
BisI GCNGC 4 cut(s) 32, 70, 187, 328
BlsI GCNGC 4 cut(s) 33, 71, 188, 329
Bme1390I CCNGG 3 cut(s) 191, 226, 868
Bme18I GGWCC 3 cut(s) 228, 558, 589
BmgBI CACGTC 1 cut(s) 445
BmgT120I GGNCC 5 cut(s) 228, 453, 454, 558, 589
BmiI GGNNCC 5 cut(s) 115, 455, 559, 591, 872
BmrFI CCNGG 3 cut(s) 191, 226, 868
BmrI ACTGGG 2 cut(s) 361, 766
BmsI GCATC 2 cut(s) 219, 288
BmuI ACTGGG 2 cut(s) 361, 766
BpiI GAAGAC 4 cut(s) 65, 156, 955, 1071
BplI GAGNNNNNCTC 2 cut(s) 197, 229
BsaAI YACGTR 1 cut(s) 55
BsaHI GRCGYC 1 cut(s) 131
BsaJI CCNNGG 4 cut(s) 126, 204, 325, 878
BsaWI WCCGGW 2 cut(s) 466, 896
BsaXI ACNNNNNCTCC 9 cut(s) 236, 266, 278, 308, 758, 788, 891, 921, 1076
Bsc4I CCNNNNNNNGG 4 cut(s) 193, 283, 555, 1038
Bse118I RCCGGY 3 cut(s) 48, 302, 428
Bse1I ACTGG 3 cut(s) 367, 516, 772
BseBI CCWGG 3 cut(s) 191, 226, 868
BseDI CCNNGG 4 cut(s) 126, 204, 325, 878
BseGI GGATG 2 cut(s) 805, 814
BseLI CCNNNNNNNGG 4 cut(s) 193, 283, 555, 1038
BseMII CTCAG 1 cut(s) 951
BseNI ACTGG 3 cut(s) 367, 516, 772
BseSI GKGCMC 1 cut(s) 457
Bsh1236I CGCG 4 cut(s) 69, 327, 492, 1090
Bsh1285I CGRYCG 1 cut(s) 268
BshFI GGCC 4 cut(s) 72, 125, 330, 455
BshNI GGYRCC 1 cut(s) 870
BsiEI CGRYCG 1 cut(s) 268
BsiSI CCGG 6 cut(s) 49, 303, 387, 429, 467, 897
BslFI GGGAC 7 cut(s) 210, 299, 557, 571, 575, 754, 866
BslI CCNNNNNNNGG 4 cut(s) 193, 283, 555, 1038
BsmAI GTCTC 4 cut(s) 388, 395, 514, 1079
BsmBI CGTCTC 4 cut(s) 388, 395, 514, 1079
BsmFI GGGAC 7 cut(s) 210, 299, 557, 571, 575, 754, 866
BsnI GGCC 4 cut(s) 72, 125, 330, 455
Bsp120I GGGCCC 1 cut(s) 453
Bsp1286I GDGCHC 1 cut(s) 457
Bsp143I GATC 2 cut(s) 150, 757
Bsp19I CCATGG 1 cut(s) 878
Bsp68I TCGCGA 1 cut(s) 492
BspANI GGCC 4 cut(s) 72, 125, 330, 455
BspCNI CTCAG 1 cut(s) 950
BspFNI CGCG 4 cut(s) 69, 327, 492, 1090
BspLI GGNNCC 5 cut(s) 115, 455, 559, 591, 872
BspMI ACCTGC 1 cut(s) 569
BspPI GGATC 2 cut(s) 145, 752
BspT107I GGYRCC 1 cut(s) 870
BspTI CTTAAG 1 cut(s) 662
BsrBI CCGCTC 1 cut(s) 1036
BsrFI RCCGGY 3 cut(s) 48, 302, 428
BsrI ACTGG 3 cut(s) 367, 516, 772
BssAI RCCGGY 3 cut(s) 48, 302, 428
BssECI CCNNGG 4 cut(s) 126, 204, 325, 878
BssMI GATC 2 cut(s) 150, 757
BssNI GRCGYC 1 cut(s) 131
BssSI CACGAG 1 cut(s) 74
BssT1I CCWWGG 1 cut(s) 878
Bst2BI CACGAG 1 cut(s) 74
Bst2UI CCWGG 3 cut(s) 191, 226, 868
Bst4CI ACNGT 2 cut(s) 148, 1058
Bst6I CTCTTC 1 cut(s) 1037
BstACI GRCGYC 1 cut(s) 131
BstAFI CTTAAG 1 cut(s) 662
BstAPI GCANNNNNTGC 1 cut(s) 28
BstBAI YACGTR 1 cut(s) 55
BstC8I GCNNGC 2 cut(s) 7, 923
BstDEI CTNAG 1 cut(s) 937
BstDSI CCRYGG 2 cut(s) 325, 878
BstEII GGTNACC 1 cut(s) 469
BstF5I GGATG 2 cut(s) 805, 814
BstFNI CGCG 4 cut(s) 69, 327, 492, 1090
BstH2I RGCGCY 1 cut(s) 84
BstHHI GCGC 3 cut(s) 83, 186, 353
BstKTI GATC 2 cut(s) 153, 760
BstMAI GTCTC 4 cut(s) 388, 395, 514, 1079
BstMBI GATC 2 cut(s) 150, 757
BstMCI CGRYCG 1 cut(s) 268
BstMWI GCNNNNNNNGC 5 cut(s) 28, 78, 276, 489, 931
BstNI CCWGG 3 cut(s) 191, 226, 868
BstPI GGTNACC 1 cut(s) 469
BstSCI CCNGG 3 cut(s) 189, 224, 866
BstSLI GKGCMC 1 cut(s) 457
BstUI CGCG 4 cut(s) 69, 327, 492, 1090
BstV2I GAAGAC 4 cut(s) 65, 156, 955, 1071
BsuRI GGCC 4 cut(s) 72, 125, 330, 455
BtgI CCRYGG 2 cut(s) 325, 878
BtgZI GCGATG 2 cut(s) 507, 625
BtrI CACGTC 1 cut(s) 445
BtsCI GGATG 2 cut(s) 805, 814
BtsI GCAGTG 2 cut(s) 16, 22
BtsIMutI CAGTG 3 cut(s) 16, 22, 890
BtuMI TCGCGA 1 cut(s) 492
BveI ACCTGC 1 cut(s) 569
Cac8I GCNNGC 2 cut(s) 7, 923
CfoI GCGC 3 cut(s) 83, 186, 353
Cfr10I RCCGGY 3 cut(s) 48, 302, 428
Cfr13I GGNCC 5 cut(s) 228, 453, 454, 558, 589
Cfr42I CCGCGG 1 cut(s) 328
CseI GACGC 4 cut(s) 82, 120, 296, 301
Csp6I GTAC 2 cut(s) 37, 985
CspCI CAANNNNNGTGG 2 cut(s) 937, 972
CviAII CATG 3 cut(s) 805, 817, 879
CviQI GTAC 2 cut(s) 37, 985
DdeI CTNAG 1 cut(s) 937
DpnI GATC 2 cut(s) 152, 759
DpnII GATC 2 cut(s) 150, 757
DrdI GACNNNNNNGTC 1 cut(s) 587
DseDI GACNNNNNNGTC 1 cut(s) 587
EaeI YGGCCR 2 cut(s) 70, 328
Eam1104I CTCTTC 1 cut(s) 1037
EarI CTCTTC 1 cut(s) 1037
EciI GGCGGA 3 cut(s) 244, 502, 595
Eco130I CCWWGG 1 cut(s) 878
Eco24I GRGCYC 1 cut(s) 457
Eco47I GGWCC 3 cut(s) 228, 558, 589
Eco72I CACGTG 1 cut(s) 55
Eco91I GGTNACC 1 cut(s) 469
EcoO109I RGGNCCY 3 cut(s) 453, 558, 589
EcoO65I GGTNACC 1 cut(s) 469
EcoRII CCWGG 3 cut(s) 189, 224, 866
EcoT14I CCWWGG 1 cut(s) 878
EcoT38I GRGCYC 1 cut(s) 457
ErhI CCWWGG 1 cut(s) 878
Esp3I CGTCTC 4 cut(s) 388, 395, 514, 1079
FaeI CATG 3 cut(s) 808, 820, 882
FaqI GGGAC 7 cut(s) 210, 299, 557, 571, 575, 754, 866
FatI CATG 3 cut(s) 804, 816, 878
Fnu4HI GCNGC 4 cut(s) 32, 70, 187, 328
FokI GGATG 2 cut(s) 812, 821
FriOI GRGCYC 1 cut(s) 457
Fsp4HI GCNGC 4 cut(s) 32, 70, 187, 328
FspBI CTAG 3 cut(s) 173, 650, 905
GlaI GCGC 3 cut(s) 82, 185, 352
GluI GCNGC 4 cut(s) 32, 70, 187, 328
HaeII RGCGCY 1 cut(s) 84
HaeIII GGCC 4 cut(s) 72, 125, 330, 455
HapII CCGG 6 cut(s) 49, 303, 387, 429, 467, 897
HgaI GACGC 4 cut(s) 82, 120, 296, 301
HhaI GCGC 3 cut(s) 83, 186, 353
Hin1I GRCGYC 1 cut(s) 131
Hin1II CATG 3 cut(s) 808, 820, 882
Hin6I GCGC 3 cut(s) 81, 184, 351
HinP1I GCGC 3 cut(s) 81, 184, 351
HinfI GANTC 4 cut(s) 236, 406, 767, 842
HpaII CCGG 6 cut(s) 49, 303, 387, 429, 467, 897
HphI GGTGA 1 cut(s) 481
Hpy188I TCNGA 7 cut(s) 205, 217, 235, 262, 337, 411, 762
Hpy188III TCNNGA 8 cut(s) 316, 424, 491, 521, 650, 694, 727, 833
Hpy99I CGWCG 6 cut(s) 113, 136, 266, 401, 527, 685
HpyAV CCTTC 4 cut(s) 74, 691, 757, 873
HpyCH4III ACNGT 2 cut(s) 148, 1058
HpyCH4IV ACGT 2 cut(s) 54, 444
HpyCH4V TGCA 4 cut(s) 534, 672, 934, 1019
HpyF10VI GCNNNNNNNGC 5 cut(s) 28, 78, 276, 489, 931
HpyF3I CTNAG 1 cut(s) 937
HpySE526I ACGT 2 cut(s) 54, 444
Hsp92I GRCGYC 1 cut(s) 131
Hsp92II CATG 3 cut(s) 808, 820, 882
HspAI GCGC 3 cut(s) 81, 184, 351
KspI CCGCGG 1 cut(s) 328
Kzo9I GATC 2 cut(s) 150, 757
LmnI GCTCC 2 cut(s) 257, 791
LweI GCATC 2 cut(s) 219, 288
MaeI CTAG 3 cut(s) 173, 650, 905
MaeII ACGT 2 cut(s) 54, 444
MaeIII GTNAC 2 cut(s) 469, 518
MalI GATC 2 cut(s) 152, 759
MbiI CCGCTC 1 cut(s) 1036
MboI GATC 2 cut(s) 150, 757
MboII GAAGA 6 cut(s) 70, 156, 797, 955, 1054, 1076
MhlI GDGCHC 1 cut(s) 457
MluCI AATT 4 cut(s) 98, 576, 629, 969
MlyI GAGTC 3 cut(s) 230, 776, 836
MmeI TCCRAC 7 cut(s) 129, 240, 258, 285, 360, 396, 1077
MseI TTAA 1 cut(s) 663
MspA1I CMGCKG 1 cut(s) 327
MspCI CTTAAG 1 cut(s) 662
MspI CCGG 6 cut(s) 49, 303, 387, 429, 467, 897
MspR9I CCNGG 3 cut(s) 191, 226, 868
MvaI CCWGG 3 cut(s) 191, 226, 868
MvnI CGCG 4 cut(s) 69, 327, 492, 1090
MwoI GCNNNNNNNGC 5 cut(s) 28, 78, 276, 489, 931
NcoI CCATGG 1 cut(s) 878
NdeII GATC 2 cut(s) 150, 757
NlaIII CATG 3 cut(s) 808, 820, 882
NlaIV GGNNCC 5 cut(s) 115, 455, 559, 591, 872
NmeAIII GCCGAG 2 cut(s) 107, 1057
NmuCI GTSAC 2 cut(s) 469, 518
NruI TCGCGA 1 cut(s) 492
PcsI WCGNNNNNNNCGW 1 cut(s) 81
PfeI GAWTC 1 cut(s) 406
PkrI GCNGC 4 cut(s) 33, 71, 188, 329
PleI GAGTC 3 cut(s) 230, 775, 836
PmaCI CACGTG 1 cut(s) 55
PmlI CACGTG 1 cut(s) 55
PpsI GAGTC 3 cut(s) 230, 775, 836
Ppu21I YACGTR 1 cut(s) 55
PpuMI RGGWCCY 2 cut(s) 558, 589
Psp5II RGGWCCY 2 cut(s) 558, 589
Psp6I CCWGG 3 cut(s) 189, 224, 866
PspCI CACGTG 1 cut(s) 55
PspEI GGTNACC 1 cut(s) 469
PspGI CCWGG 3 cut(s) 189, 224, 866
PspN4I GGNNCC 5 cut(s) 115, 455, 559, 591, 872
PspOMI GGGCCC 1 cut(s) 453
PspPI GGNCC 5 cut(s) 228, 453, 454, 558, 589
PspPPI RGGWCCY 2 cut(s) 558, 589
RruI TCGCGA 1 cut(s) 492
RsaI GTAC 2 cut(s) 38, 986
RsaNI GTAC 2 cut(s) 37, 985
SacII CCGCGG 1 cut(s) 328
SaqAI TTAA 1 cut(s) 663
SatI GCNGC 4 cut(s) 32, 70, 187, 328
Sau3AI GATC 2 cut(s) 150, 757
Sau96I GGNCC 5 cut(s) 228, 453, 454, 558, 589
SchI GAGTC 3 cut(s) 230, 776, 836
ScrFI CCNGG 3 cut(s) 191, 226, 868
SduI GDGCHC 1 cut(s) 457
SfaNI GCATC 2 cut(s) 219, 288
Sfr303I CCGCGG 1 cut(s) 328
SgrAI CRCCGGYG 1 cut(s) 302
SgrBI CCGCGG 1 cut(s) 328
SinI GGWCC 3 cut(s) 228, 558, 589
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
Sse9I AATT 4 cut(s) 98, 576, 629, 969
SspMI CTAG 3 cut(s) 173, 650, 905
StyD4I CCNGG 3 cut(s) 189, 224, 866
StyI CCWWGG 1 cut(s) 878
TaaI ACNGT 2 cut(s) 148, 1058
TaiI ACGT 2 cut(s) 57, 447
TaqI TCGA 2 cut(s) 396, 680
TasI AATT 4 cut(s) 98, 576, 629, 969
TauI GCSGC 4 cut(s) 34, 72, 189, 330
TfiI GAWTC 1 cut(s) 406
Tru1I TTAA 1 cut(s) 663
Tru9I TTAA 1 cut(s) 663
TscAI CASTG 3 cut(s) 16, 22, 897
TseFI GTSAC 2 cut(s) 469, 518
Tsp45I GTSAC 2 cut(s) 469, 518
TspDTI ATGAA 4 cut(s) 622, 798, 833, 990
TspGWI ACGGA 4 cut(s) 126, 466, 639, 835
TspRI CASTG 3 cut(s) 16, 22, 897
Vha464I CTTAAG 1 cut(s) 662
VpaK11BI GGWCC 3 cut(s) 228, 558, 589
XapI RAATTY 2 cut(s) 98, 629
XbaI TCTAGA 1 cut(s) 649
XspI CTAG 3 cut(s) 173, 650, 905
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.