Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011820

Physical Location & Seq

Genomic Coordinates Forward (+)

58571848 .. 58576319

Gene Structure 4472 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26649

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGATGAAGGCCCTCGCGGCCACCGCGGCGGAGATCGTGAAGAACCCGACGTTCATCAAAATTACAGCTATTGCCATCGCCTCCTTCACCCTCTTCGTCCTCGCCAACCACTACTCCGCTTCCTACTCTCCCTTCTCCTCCTCCACCTCCACCGCCACCGCCACAACCTCTCTCGCATCTCCGGCGCCGGAATCCTCTCCACCGACACCTCCCGCCTCTCCTCCACCGCCGCCGCCGCCTTCACCGCCTCCGCCTCCACCCCCGGAGGTGGAGAGGATGGGGATAGTGGACGAGAACGGCGCGATGTCGGAGGAGTTCAAGGTCGGCGAGTTCGACGCGACCCTGGCCGAGGAGCTGAAGAATGCGAGCGGAGGAGTGAAGGATGGGAGTGGCGGTGACGGCAATGGCGGTGGTGTTAGGGTTAAGATTGACAAGTTTGGGGTGTGTGATCAGAAATTCACTGATTATATACCGTGTTTGGACAATGTGGATGAGATTAAGAAGCTGAACTCGACTGAGAGAGGTGAAAAGTTTGAAAGGCATTGTCCTGGAGAAGGCAAGAGGCTGAATTGCTTGGTGCCGAGGCCGAAAGGGTATCAGATTCGAATTCCTTGGCCTCAGAGCAGAGATGAGGTGTGGTTCAGTAATGTACCCCATACAAGACTTGTCGAAGACAAAGGTGGTCAAAATTGGATAGCGATTAAGAAAGATAAATTTGTGTTTCCTGGAGGTGGAACACAGTTTATTCATGGGGCAAATGAGTACTTGGATCAGATTTCTCAGATGATTCCTGAAATTGCATTTGGCCGCAAGACCCGAGTAGCGTTAGATGTTGGTTGTGGAGTAGCGAGTTTTGGTGCCTTTTTGATGCAACGGAATGTGACCACTCTGTCAGTAGCGCCAAAAGATGTCCATGAGAACCAGATCCAGTTTGCACTAGAGCGTGGTGTGCCTGCTATGGTGGCAGTGTTTGCAACTCACCGCTTGTTGTATCCAAGCCAGGCTTTTGACTTGATCCACTGTTCAAGATGTAGAATTAATTGGACTCGTGATGACGGAATTTGGCTTCTCGAGGTTGACAGGTTGCTGAGAGCAGGAGGATATTTTGTTTGGGCAGCGCAGCCTGTTTATAAACATGAAGAAGCCCTACAAGTACAATGGAAAGAAATGGAGGACCTGACTACACGCATTTGCTGGGAACTTATAAAGAAGGAAGGGATGATTGCCATATGGAGGAAACCTTTGAACAACAGCTGCTATCTTAGTCGTGATGTCGAAGTGCAGCCTCCATTATGTGATTCCAATGATGATCCAGACAATGTTTGGTATGTTGGTTTGAAGGCATGCATCACTCGGTTACCTGAAAATGGTTATGGAGCAAATGTTTCTTTGTGGCCTGCAAGGCTTCAGGATCCACCAGACAGACTCCAGAGCATACGATTAGATGCCTATATATCTAGAAAAGAAATCTTCACGGCTGAGGCAAAGTACTGGAATGAAATATTAACAGGTTATGTTGGTGCTTACCATTGGAAAGAGTTAAACTTTAGAAACATAATGGACATGAGGGCTGGATATGGAGGGTTTGCAGCAGCATTGCATGACCACGGGCTAGATTGTTGGGTAATGAATGTTGTTCCTGTTTCTGGGTTCAACACCTTACCAGTTATTTATGACCGTGGACTTATCGGAGTAATGCATGACTGGTGTGAGCCATTTGACACTTATCCAAGAACATATGACTTACTGCACGCAGCGGGTCTCTTCTCTATCGAGCAAAAGAGGTGTAATATCTCAACCATCATTCTTGAAATGGACCGAATGTTAAGGCCTGGGGGACGCGTTTATATACGTGACTCTGTGTCTGTAATCGGTGAGCTTCACGAACTTGCAAATGCAGTTGGATGGGTGCCTGCACTACACGATACAGGAGAAGGACCCCATGCAAGCTGGAAGATCTTAATGGGTGACAAGCGTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0016740 GO:0016741 GO:0032259 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

660

Amino Acids

73.53

Weight (kDa)

5.94

Isoelectric Point (pI)

41.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	155 - 658	1.2e-226	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	276 - 370	4.7e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77260
fragaria_vesca	FvH4_2g28020
malus_domestica	MD15G1132900.v1.1
prunus_persica	Prupe.1G488500_v2.0.a1 Prupe.1G488500_v2.0.a1
pyrus_communis	pycom15g11980
rosa_chinensis	RchiOBHm_Chr6g0296881
rosa_laevigata	RLG00000011649
rosa_multiflora	Rmu_co8446841.1_g000001 Rmu_sc0033097.1_g000001 Rmu_sc0038066.1_g000001
rosa_roxburghii	Rroxscaffold_7G00171060
rosa_rugosa	Rorug06G0267200 Rorug06G0267300
rosa_samantha	Rh6AG378000 Rh6BG386000 Rh6CG391400 Rh6DG378700
rosa_wichuraiana	Rw6G033040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1131, 1205
AasI	GACNNNNNNGTC	1 cut(s)	889
AccB1I	GGYRCC	4 cut(s)	184, 577, 857, 1909
AccBSI	CCGCTC	1 cut(s)	369
AccII	CGCG	5 cut(s)	17, 26, 302, 338, 1842
AclWI	GGATC	6 cut(s)	777, 919, 1009, 1304, 1406, 1419
AcoI	YGGCCR	3 cut(s)	18, 345, 805
AcsI	RAATTY	4 cut(s)	455, 606, 713, 1059
AcuI	CTGAAG	2 cut(s)	377, 1391
AcyI	GRCGYC	1 cut(s)	185
AfaI	GTAC	4 cut(s)	651, 764, 1155, 1490
AfiI	CCNNNNNNNGG	7 cut(s)	268, 349, 554, 731, 1233, 1367, 1646
AflIII	ACRYGT	1 cut(s)	1840
AgsI	TTSAA	7 cut(s)	319, 536, 1026, 1246, 1339, 1654, 1811
AhdI	GACNNNNNGTC	1 cut(s)	1861
AjnI	CCWGG	5 cut(s)	342, 547, 724, 999, 1831
AjuI	GAANNNNNNNTTGG	2 cut(s)	786, 818
AluBI	AGCT	6 cut(s)	68, 355, 505, 1254, 1879, 1950
AluI	AGCT	6 cut(s)	68, 355, 505, 1254, 1879, 1950
Alw26I	GTCTC	1 cut(s)	1766
AlwI	GGATC	6 cut(s)	777, 919, 1009, 1304, 1406, 1419
Ama87I	CYCGRG	2 cut(s)	816, 1070
AoxI	GGCC	8 cut(s)	9, 18, 345, 584, 614, 805, 1394, 1829
ApeKI	GCWGC	7 cut(s)	1115, 1120, 1254, 1282, 1589, 1592, 1754
ApoI	RAATTY	4 cut(s)	455, 606, 713, 1059
AseI	ATTAAT	1 cut(s)	1038
AspLEI	GCGC	4 cut(s)	187, 302, 901, 1120
AspS9I	GGNCC	4 cut(s)	10, 1174, 1816, 1937
AsuC2I	CCSGG	1 cut(s)	263
AsuHPI	GGTGA	7 cut(s)	79, 234, 407, 536, 971, 1886, 1979
AsuII	TTCGAA	1 cut(s)	604
AvaI	CYCGRG	2 cut(s)	816, 1070
AvaII	GGWCC	3 cut(s)	1174, 1816, 1937
BamHI	GGATCC	1 cut(s)	1411
BanI	GGYRCC	4 cut(s)	184, 577, 857, 1909
BarI	GAAGNNNNNNTAC	2 cut(s)	1131, 1163
BauI	CACGAG	1 cut(s)	1047
BbsI	GAAGAC	1 cut(s)	678
BbvCI	CCTCAGC	1 cut(s)	1479
BbvI	GCAGC	7 cut(s)	1127, 1132, 1241, 1294, 1601, 1604, 1766
BccI	CCATC	5 cut(s)	83, 271, 377, 1808, 1899
BceAI	ACGGC	3 cut(s)	313, 415, 1491
BciT130I	CCWGG	5 cut(s)	344, 549, 726, 1001, 1833
BciVI	GTATCC	1 cut(s)	1002
BclI	TGATCA	1 cut(s)	448
BcnI	CCSGG	1 cut(s)	263
BcoDI	GTCTC	1 cut(s)	1766
BfaI	CTAG	3 cut(s)	938, 1458, 1613
BfoI	RGCGCY	2 cut(s)	188, 902
BfuI	GTATCC	1 cut(s)	1002
BglI	GCCNNNNNGGC	3 cut(s)	17, 26, 1402
BglII	AGATCT	1 cut(s)	1956
BmcAI	AGTACT	2 cut(s)	764, 1490
Bme1390I	CCNGG	6 cut(s)	263, 344, 549, 726, 1001, 1833
Bme18I	GGWCC	3 cut(s)	1174, 1816, 1937
BmeRI	GACNNNNNGTC	1 cut(s)	1861
BmeT110I	CYCGRG	2 cut(s)	816, 1070
BmgT120I	GGNCC	4 cut(s)	10, 1174, 1816, 1937
BmiI	GGNNCC	6 cut(s)	186, 579, 859, 1413, 1911, 1939
BmrFI	CCNGG	6 cut(s)	263, 344, 549, 726, 1001, 1833
BmsI	GCATC	4 cut(s)	185, 858, 1356, 1435
BpiI	GAAGAC	1 cut(s)	678
BpmI	CTGGAG	3 cut(s)	570, 747, 1412
Bpu10I	CCTNAGC	1 cut(s)	1479
Bpu14I	TTCGAA	1 cut(s)	604
BpuMI	CCSGG	1 cut(s)	263
BsaAI	YACGTR	1 cut(s)	1853
BsaHI	GRCGYC	1 cut(s)	185
BsaI	GGTCTC	1 cut(s)	1766
BsaJI	CCNNGG	9 cut(s)	24, 261, 342, 348, 581, 611, 1606, 1678, 1832
BsaXI	ACNNNNNCTCC	6 cut(s)	98, 128, 379, 409, 1368, 1398
Bsc4I	CCNNNNNNNGG	7 cut(s)	268, 349, 554, 731, 1233, 1367, 1646
Bse1I	ACTGG	4 cut(s)	928, 1496, 1664, 1709
Bse3DI	GCAATG	2 cut(s)	409, 1595
BseBI	CCWGG	5 cut(s)	344, 549, 726, 1001, 1833
BseDI	CCNNGG	9 cut(s)	24, 261, 342, 348, 581, 611, 1606, 1678, 1832
BseGI	GGATG	5 cut(s)	282, 388, 496, 1224, 1910
BseLI	CCNNNNNNNGG	7 cut(s)	268, 349, 554, 731, 1233, 1367, 1646
BseMI	GCAATG	2 cut(s)	409, 1595
BseMII	CTCAG	5 cut(s)	507, 632, 794, 1079, 1470
BseNI	ACTGG	4 cut(s)	928, 1496, 1664, 1709
BseRI	GAGGAG	6 cut(s)	127, 130, 210, 326, 365, 387
BseXI	GCAGC	7 cut(s)	1127, 1132, 1241, 1294, 1601, 1604, 1766
BseYI	CCCAGC	1 cut(s)	1194
BsgI	GTGCAG	3 cut(s)	1301, 1733, 1899
Bsh1236I	CGCG	5 cut(s)	17, 26, 302, 338, 1842
BshFI	GGCC	8 cut(s)	11, 20, 347, 586, 616, 807, 1396, 1831
BshNI	GGYRCC	4 cut(s)	184, 577, 857, 1909
BsiHKCI	CYCGRG	2 cut(s)	816, 1070
BsiSI	CCGG	3 cut(s)	182, 188, 263
BslFI	GGGAC	1 cut(s)	1851
BslI	CCNNNNNNNGG	7 cut(s)	268, 349, 554, 731, 1233, 1367, 1646
BsmAI	GTCTC	1 cut(s)	1766
BsmFI	GGGAC	1 cut(s)	1851
BsmI	GAATGC	1 cut(s)	367
BsnI	GGCC	8 cut(s)	11, 20, 347, 586, 616, 807, 1396, 1831
Bso31I	GGTCTC	1 cut(s)	1766
BsoBI	CYCGRG	2 cut(s)	816, 1070
Bsp119I	TTCGAA	1 cut(s)	604
Bsp143I	GATC	8 cut(s)	33, 448, 769, 924, 1014, 1309, 1411, 1956
BspANI	GGCC	8 cut(s)	11, 20, 347, 586, 616, 807, 1396, 1831
BspCNI	CTCAG	5 cut(s)	508, 631, 793, 1080, 1471
BspFNI	CGCG	5 cut(s)	17, 26, 302, 338, 1842
BspLI	GGNNCC	6 cut(s)	186, 579, 859, 1413, 1911, 1939
BspPI	GGATC	6 cut(s)	777, 919, 1009, 1304, 1406, 1419
BspT104I	TTCGAA	1 cut(s)	604
BspT107I	GGYRCC	4 cut(s)	184, 577, 857, 1909
BspTNI	GGTCTC	1 cut(s)	1766
BsrBI	CCGCTC	1 cut(s)	369
BsrDI	GCAATG	2 cut(s)	409, 1595
BsrI	ACTGG	4 cut(s)	928, 1496, 1664, 1709
BssECI	CCNNGG	9 cut(s)	24, 261, 342, 348, 581, 611, 1606, 1678, 1832
BssMI	GATC	8 cut(s)	33, 448, 769, 924, 1014, 1309, 1411, 1956
BssNI	GRCGYC	1 cut(s)	185
BssSI	CACGAG	1 cut(s)	1047
BssT1I	CCWWGG	1 cut(s)	611
Bst2BI	CACGAG	1 cut(s)	1047
Bst2UI	CCWGG	5 cut(s)	344, 549, 726, 1001, 1833
Bst4CI	ACNGT	4 cut(s)	474, 741, 1022, 1679
Bst6I	CTCTTC	2 cut(s)	98, 1769
BstACI	GRCGYC	1 cut(s)	185
BstAPI	GCANNNNNTGC	1 cut(s)	971
BstBAI	YACGTR	1 cut(s)	1853
BstBI	TTCGAA	1 cut(s)	604
BstC8I	GCNNGC	7 cut(s)	367, 954, 1345, 1398, 1752, 1914, 1948
BstDEI	CTNAG	6 cut(s)	516, 618, 780, 1088, 1262, 1479
BstDSI	CCRYGG	3 cut(s)	24, 1606, 1678
BstEII	GGTNACC	1 cut(s)	1356
BstENI	CCTNNNNNAGG	2 cut(s)	347, 552
BstF5I	GGATG	5 cut(s)	282, 388, 496, 1224, 1910
BstFNI	CGCG	5 cut(s)	17, 26, 302, 338, 1842
BstH2I	RGCGCY	2 cut(s)	188, 902
BstHHI	GCGC	4 cut(s)	187, 302, 901, 1120
BstKTI	GATC	8 cut(s)	36, 451, 772, 927, 1017, 1312, 1414, 1959
BstMAI	GTCTC	1 cut(s)	1766
BstMBI	GATC	8 cut(s)	33, 448, 769, 924, 1014, 1309, 1411, 1956
BstNI	CCWGG	5 cut(s)	344, 549, 726, 1001, 1833
BstNSI	RCATGY	1 cut(s)	1347
BstPI	GGTNACC	1 cut(s)	1356
BstSCI	CCNGG	6 cut(s)	261, 342, 547, 724, 999, 1831
BstUI	CGCG	5 cut(s)	17, 26, 302, 338, 1842
BstV1I	GCAGC	7 cut(s)	1127, 1132, 1241, 1294, 1601, 1604, 1766
BstV2I	GAAGAC	1 cut(s)	678
BstX2I	RGATCY	3 cut(s)	924, 1411, 1956
BstYI	RGATCY	3 cut(s)	924, 1411, 1956
BsuI	GTATCC	1 cut(s)	1002
BsuRI	GGCC	8 cut(s)	11, 20, 347, 586, 616, 807, 1396, 1831
BtgI	CCRYGG	3 cut(s)	24, 1606, 1678
BtgZI	GCGATG	2 cut(s)	61, 317
BtsCI	GGATG	5 cut(s)	282, 388, 496, 1224, 1910
BtsI	GCAGTG	1 cut(s)	972
BtsIMutI	CAGTG	3 cut(s)	459, 972, 1018
Cac8I	GCNNGC	7 cut(s)	367, 954, 1345, 1398, 1752, 1914, 1948
CfoI	GCGC	4 cut(s)	187, 302, 901, 1120
Cfr13I	GGNCC	4 cut(s)	10, 1174, 1816, 1937
Cfr42I	CCGCGG	1 cut(s)	27
CseI	GACGC	2 cut(s)	344, 1848
Csp6I	GTAC	4 cut(s)	650, 763, 1154, 1489
CspCI	CAANNNNNGTGG	2 cut(s)	391, 426
CviAII	CATG	8 cut(s)	749, 914, 1136, 1344, 1564, 1601, 1700, 1943
CviQI	GTAC	4 cut(s)	650, 763, 1154, 1489
DdeI	CTNAG	6 cut(s)	516, 618, 780, 1088, 1262, 1479
DinI	GGCGCC	1 cut(s)	186
DpnI	GATC	8 cut(s)	35, 450, 771, 926, 1016, 1311, 1413, 1958
DpnII	GATC	8 cut(s)	33, 448, 769, 924, 1014, 1309, 1411, 1956
DrdI	GACNNNNNNGTC	1 cut(s)	889
DriI	GACNNNNNGTC	1 cut(s)	1861
DseDI	GACNNNNNNGTC	1 cut(s)	889
EaeI	YGGCCR	3 cut(s)	18, 345, 805
Eam1104I	CTCTTC	2 cut(s)	98, 1769
Eam1105I	GACNNNNNGTC	1 cut(s)	1861
EarI	CTCTTC	2 cut(s)	98, 1769
EciI	GGCGGA	2 cut(s)	44, 240
Eco130I	CCWWGG	1 cut(s)	611
Eco147I	AGGCCT	1 cut(s)	1831
Eco31I	GGTCTC	1 cut(s)	1766
Eco47I	GGWCC	3 cut(s)	1174, 1816, 1937
Eco57I	CTGAAG	2 cut(s)	377, 1391
Eco88I	CYCGRG	2 cut(s)	816, 1070
Eco91I	GGTNACC	1 cut(s)	1356
EcoNI	CCTNNNNNAGG	2 cut(s)	347, 552
EcoO109I	RGGNCCY	3 cut(s)	10, 1174, 1937
EcoO65I	GGTNACC	1 cut(s)	1356
EcoRI	GAATTC	1 cut(s)	606
EcoRII	CCWGG	5 cut(s)	342, 547, 724, 999, 1831
EcoT14I	CCWWGG	1 cut(s)	611
EcoT22I	ATGCAT	2 cut(s)	1349, 1701
EgeI	GGCGCC	1 cut(s)	186
EheI	GGCGCC	1 cut(s)	186
ErhI	CCWWGG	1 cut(s)	611
FaeI	CATG	8 cut(s)	752, 917, 1139, 1347, 1567, 1604, 1703, 1946
FalI	AAGNNNNNCTT	2 cut(s)	988, 1020
FaqI	GGGAC	1 cut(s)	1851
FatI	CATG	8 cut(s)	748, 913, 1135, 1343, 1563, 1600, 1699, 1942
FauI	CCCGC	2 cut(s)	220, 1750
FauNDI	CATATG	2 cut(s)	1229, 1738
FbaI	TGATCA	1 cut(s)	448
FokI	GGATG	5 cut(s)	289, 395, 503, 1231, 1917
FspBI	CTAG	3 cut(s)	938, 1458, 1613
GlaI	GCGC	4 cut(s)	186, 301, 900, 1119
GsaI	CCCAGC	1 cut(s)	1198
GsuI	CTGGAG	3 cut(s)	570, 747, 1412
HaeII	RGCGCY	2 cut(s)	188, 902
HaeIII	GGCC	8 cut(s)	11, 20, 347, 586, 616, 807, 1396, 1831
HapII	CCGG	3 cut(s)	182, 188, 263
HgaI	GACGC	2 cut(s)	344, 1848
HhaI	GCGC	4 cut(s)	187, 302, 901, 1120
Hin1I	GRCGYC	1 cut(s)	185
Hin1II	CATG	8 cut(s)	752, 917, 1139, 1347, 1567, 1604, 1703, 1946
Hin6I	GCGC	4 cut(s)	185, 300, 899, 1118
HinP1I	GCGC	4 cut(s)	185, 300, 899, 1118
HincII	GTYRAC	1 cut(s)	1078
HindII	GTYRAC	1 cut(s)	1078
HinfI	GANTC	7 cut(s)	191, 601, 787, 1045, 1298, 1425, 1856
HpaII	CCGG	3 cut(s)	182, 188, 263
HphI	GGTGA	7 cut(s)	79, 234, 407, 536, 971, 1886, 1979
Hpy166II	GTNNAC	3 cut(s)	289, 1078, 1682
Hpy188I	TCNGA	7 cut(s)	310, 453, 600, 621, 774, 783, 1691
Hpy8I	GTNNAC	3 cut(s)	289, 1078, 1682
Hpy99I	CGWCG	2 cut(s)	52, 338
HpyAV	CCTTC	9 cut(s)	94, 142, 249, 373, 548, 1204, 1208, 1333, 1928
HpyCH4III	ACNGT	4 cut(s)	474, 741, 1022, 1679
HpyCH4IV	ACGT	2 cut(s)	50, 1852
HpyF3I	CTNAG	6 cut(s)	516, 618, 780, 1088, 1262, 1479
HpySE526I	ACGT	2 cut(s)	50, 1852
Hsp92I	GRCGYC	1 cut(s)	185
Hsp92II	CATG	8 cut(s)	752, 917, 1139, 1347, 1567, 1604, 1703, 1946
HspAI	GCGC	4 cut(s)	185, 300, 899, 1118
KasI	GGCGCC	1 cut(s)	184
Ksp22I	TGATCA	1 cut(s)	448
KspI	CCGCGG	1 cut(s)	27
Kzo9I	GATC	8 cut(s)	33, 448, 769, 924, 1014, 1309, 1411, 1956
LmnI	GCTCC	2 cut(s)	352, 1376
Lsp1109I	GCAGC	7 cut(s)	1127, 1132, 1241, 1294, 1601, 1604, 1766
LweI	GCATC	4 cut(s)	185, 858, 1356, 1435
MaeI	CTAG	3 cut(s)	938, 1458, 1613
MaeII	ACGT	2 cut(s)	50, 1852
MaeIII	GTNAC	5 cut(s)	395, 880, 1356, 1853, 1967
MalI	GATC	8 cut(s)	35, 450, 771, 926, 1016, 1311, 1413, 1958
MbiI	CCGCTC	1 cut(s)	369
MboI	GATC	8 cut(s)	33, 448, 769, 924, 1014, 1309, 1411, 1956
MboII	GAAGA	8 cut(s)	52, 85, 370, 683, 1151, 1462, 1756, 1966
MflI	RGATCY	3 cut(s)	924, 1411, 1956
MluI	ACGCGT	1 cut(s)	1840
Mly113I	GGCGCC	1 cut(s)	185
MlyI	GAGTC	3 cut(s)	1039, 1419, 1850
MmeI	TCCRAC	2 cut(s)	288, 1882
Mph1103I	ATGCAT	2 cut(s)	1349, 1701
MseI	TTAA	8 cut(s)	423, 498, 702, 1038, 1505, 1541, 1826, 1961
MspA1I	CMGCKG	3 cut(s)	26, 1254, 1757
MspI	CCGG	3 cut(s)	182, 188, 263
MspR9I	CCNGG	6 cut(s)	263, 344, 549, 726, 1001, 1833
Mva1269I	GAATGC	1 cut(s)	367
MvaI	CCWGG	5 cut(s)	344, 549, 726, 1001, 1833
MvnI	CGCG	5 cut(s)	17, 26, 302, 338, 1842
NarI	GGCGCC	1 cut(s)	185
NciI	CCSGG	1 cut(s)	263
NdeI	CATATG	2 cut(s)	1229, 1738
NdeII	GATC	8 cut(s)	33, 448, 769, 924, 1014, 1309, 1411, 1956
NlaIII	CATG	8 cut(s)	752, 917, 1139, 1347, 1567, 1604, 1703, 1946
NlaIV	GGNNCC	6 cut(s)	186, 579, 859, 1413, 1911, 1939
NmeAIII	GCCGAG	2 cut(s)	373, 606
NmuCI	GTSAC	4 cut(s)	395, 880, 1853, 1967
NsiI	ATGCAT	2 cut(s)	1349, 1701
NspI	RCATGY	1 cut(s)	1347
NspV	TTCGAA	1 cut(s)	604
PaeI	GCATGC	1 cut(s)	1347
PaeR7I	CTCGAG	1 cut(s)	1070
PceI	AGGCCT	1 cut(s)	1831
PcsI	WCGNNNNNNNCGW	1 cut(s)	330
PctI	GAATGC	1 cut(s)	367
PfeI	GAWTC	4 cut(s)	191, 601, 787, 1298
PfoI	TCCNGGA	2 cut(s)	547, 724
PleI	GAGTC	3 cut(s)	1039, 1419, 1850
PluTI	GGCGCC	1 cut(s)	188
PpsI	GAGTC	3 cut(s)	1039, 1419, 1850
Ppu21I	YACGTR	1 cut(s)	1853
PpuMI	RGGWCCY	2 cut(s)	1174, 1937
PshBI	ATTAAT	1 cut(s)	1038
PsiI	TTATAA	2 cut(s)	1131, 1205
Psp5II	RGGWCCY	2 cut(s)	1174, 1937
Psp6I	CCWGG	5 cut(s)	342, 547, 724, 999, 1831
PspEI	GGTNACC	1 cut(s)	1356
PspFI	CCCAGC	1 cut(s)	1194
PspGI	CCWGG	5 cut(s)	342, 547, 724, 999, 1831
PspN4I	GGNNCC	6 cut(s)	186, 579, 859, 1413, 1911, 1939
PspPI	GGNCC	4 cut(s)	10, 1174, 1816, 1937
PspPPI	RGGWCCY	2 cut(s)	1174, 1937
PsuI	RGATCY	3 cut(s)	924, 1411, 1956
PvuII	CAGCTG	1 cut(s)	1254
RsaI	GTAC	4 cut(s)	651, 764, 1155, 1490
RsaNI	GTAC	4 cut(s)	650, 763, 1154, 1489
SacII	CCGCGG	1 cut(s)	27
SaqAI	TTAA	8 cut(s)	423, 498, 702, 1038, 1505, 1541, 1826, 1961
Sau3AI	GATC	8 cut(s)	33, 448, 769, 924, 1014, 1309, 1411, 1956
Sau96I	GGNCC	4 cut(s)	10, 1174, 1816, 1937
ScaI	AGTACT	2 cut(s)	764, 1490
SchI	GAGTC	3 cut(s)	1039, 1419, 1850
ScrFI	CCNGG	6 cut(s)	263, 344, 549, 726, 1001, 1833
SfaNI	GCATC	4 cut(s)	185, 858, 1356, 1435
SfiI	GGCCNNNNNGGCC	1 cut(s)	17
SfoI	GGCGCC	1 cut(s)	186
Sfr274I	CTCGAG	1 cut(s)	1070
Sfr303I	CCGCGG	1 cut(s)	27
SfuI	TTCGAA	1 cut(s)	604
SgrBI	CCGCGG	1 cut(s)	27
SinI	GGWCC	3 cut(s)	1174, 1816, 1937
SlaI	CTCGAG	1 cut(s)	1070
SmlI	CTYRAG	1 cut(s)	1070
SmoI	CTYRAG	1 cut(s)	1070
SphI	GCATGC	1 cut(s)	1347
SseBI	AGGCCT	1 cut(s)	1831
SspDI	GGCGCC	1 cut(s)	184
SspI	AATATT	1 cut(s)	1503
SspMI	CTAG	3 cut(s)	938, 1458, 1613
StuI	AGGCCT	1 cut(s)	1831
StyD4I	CCNGG	6 cut(s)	261, 342, 547, 724, 999, 1831
StyI	CCWWGG	1 cut(s)	611
TaaI	ACNGT	4 cut(s)	474, 741, 1022, 1679
TaiI	ACGT	2 cut(s)	53, 1855
TaqI	TCGA	7 cut(s)	333, 512, 604, 669, 1071, 1275, 1773
TaqII	GACCGA	1 cut(s)	1833
TatI	WGTACW	3 cut(s)	762, 1153, 1488
TauI	GCSGC	6 cut(s)	20, 29, 232, 235, 238, 810
TfiI	GAWTC	4 cut(s)	191, 601, 787, 1298
Tru1I	TTAA	8 cut(s)	423, 498, 702, 1038, 1505, 1541, 1826, 1961
Tru9I	TTAA	8 cut(s)	423, 498, 702, 1038, 1505, 1541, 1826, 1961
TscAI	CASTG	3 cut(s)	466, 972, 1025
TseFI	GTSAC	4 cut(s)	395, 880, 1853, 1967
TseI	GCWGC	7 cut(s)	1115, 1120, 1254, 1282, 1589, 1592, 1754
Tsp45I	GTSAC	4 cut(s)	395, 880, 1853, 1967
TspDTI	ATGAA	6 cut(s)	20, 43, 737, 1152, 1512, 1643
TspGWI	ACGGA	2 cut(s)	889, 1071
TspRI	CASTG	3 cut(s)	466, 972, 1025
VpaK11BI	GGWCC	3 cut(s)	1174, 1816, 1937
VspI	ATTAAT	1 cut(s)	1038
XagI	CCTNNNNNAGG	2 cut(s)	347, 552
XapI	RAATTY	4 cut(s)	455, 606, 713, 1059
XbaI	TCTAGA	1 cut(s)	1457
XceI	RCATGY	1 cut(s)	1347
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1320
XhoI	CTCGAG	1 cut(s)	1070
XspI	CTAG	3 cut(s)	938, 1458, 1613
ZrmI	AGTACT	2 cut(s)	764, 1490
Zsp2I	ATGCAT	2 cut(s)	1349, 1701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.