Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0011820

Physical Location & Seq

Genomic Coordinates Forward (+)

57290918 .. 57295618

Gene Structure 4701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG378700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGAAGGCCCTCGCGGCCACCGCGGCGGAGATCTTGAAGACCCCGACGTTCATCAAAATTACAGCTATTGCCGTCGCCTCCCTCACCCTCTTCGTCCTCGCCAACCACTACTCCGCTTCCTACTCTCCCTTCTCCTCCTCCTCCTCCACCGCCACCGCCACAACCTCCGCCACTCACTCTCTCGCATCTCCGGCGCCGGAATCCTCTCCACCGACACCTCCCGCGTCTCCTCCACCGCCGCCGCCTTCACCGCCTCCGCCTCCACCCCCGGAGGTGGAGCGGATGGGGATAGTGGACGAGAACGGCGCGATGTCGGAGGAGTTCAAGGTCGGCGAGTTCGACGCGAGCCTGGCCGAGGAGCTGAAGAATGCGAGCGGTGGAGTGAAGGATGGGAGTGGCGGTGACGGCAATGGCGGTGGTGTTAGGGTTAAGATTGACAAGTTTGGGGTGTGTGATCAGAAATTCACTGATTATATACCGTGTTTGGACAATGTGGATGAGATTAAGAAGCTGAATTCGACTGAGAGAGGTGAAAAGTTTGAAAGGCATTGTCCTGGAGAAGGCAAGAGGCTGAATTGCTTGGTGCCGAGGCCGAAAGGGTATCAGATTCGAATTCCTTGGCCTCAGAGCAGAGATGAGGTGTGGTTCAGTAATGTACCCCATACAAGACTTGTCGAAGATAAAGGTGGTCAAAATTGGATAGCGATTAAGAAAGATAAATTTGTGTTTCCTGGAGGCGGAACACAGTTTATTCATGGGGCAAATGAGTACTTGGATCAGATTTCTCAGATGATTCCTGAAATTGCATTTGGCCACAAGACCCGAGTAGCGTTAGATGTTGGTTGTGGAGTAGCGAGTTTTGGTGCCTTTTTGATGCAACGGAATGTGACCACTCTGTCAGTAGCGCCAAAAGATGTCCATGAGAACCAGATCCAGTTTGCACTAGAGCGTGGTGTGCCTGCTATGGTGGCAGTGTTTGCAACTCACCGCTTGTTGTATCCAAGCCAGGCTTTTGACTTGATCCACTGTTCAAGATGTAGAATTAATTGGACTCGTGATGACGGAATTTGGCTTCTCGAGGTTGACAGGTTGCTGAGAGCAGGAGGATATTTTGTTTGGGCAGCGCAGCCTGTTTATAAACATGAAGAAGCCCTACAAGTACAATGGAAAGAAATGGAGGACCTGACTACACGCATTTGCTGGGAACTTATAAAGAAGGAAGGGATGATTGCCATATGGAGGAAACCTTTGAACAACAGCTGCTATCTTAGTCGTGATGTCGAAGTGCAGCCTCCATTATGTGATTCCAATGATGATCCAGACAATGTTTGGTATGTTGGTTTGAAGGCATGCATCACTCGGTTACCTGAAAATGGTTATGGAGCAAATGTTTCTTTGTGGCCTGCAAGGCTTCAGGATCCACCAGACAGACTCCAGAGCATACGATTAGATGCCTATATATCTAGAAAAGAAATCTTCACGGCTGAGGCAAAGTACTGGAATGAAATATTAACAGGTTATGTTGGTGCTTACCATTGGAAAGAGTTAAACTTTAGAAACATAATGGACATGAGGGCTGGATATGGAGGGTATGCTCTTCACCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0016740 GO:0016741 GO:0032259 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

535

Amino Acids

59.45

Weight (kDa)

6.15

Isoelectric Point (pI)

41.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	157 - 532	4.9e-165	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	278 - 372	3.4e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77260
fragaria_vesca	FvH4_2g28020
malus_domestica	MD15G1132900.v1.1
prunus_persica	Prupe.1G488500_v2.0.a1 Prupe.1G488500_v2.0.a1
pyrus_communis	pycom15g11980
rosa_chinensis	RchiOBHm_Chr6g0296881
rosa_laevigata	RLG00000011649
rosa_multiflora	Rmu_co8446841.1_g000001 Rmu_sc0033097.1_g000001 Rmu_sc0038066.1_g000001
rosa_roxburghii	Rroxscaffold_7G00171060
rosa_rugosa	Rorug06G0267200 Rorug06G0267300
rosa_samantha	Rh6AG378000 Rh6BG386000 Rh6CG391400 Rh6DG378700
rosa_wichuraiana	Rw6G033040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1137, 1211
AasI	GACNNNNNNGTC	1 cut(s)	895
AccB1I	GGYRCC	3 cut(s)	193, 583, 863
AccBSI	CCGCTC	2 cut(s)	280, 375
AccII	CGCG	5 cut(s)	14, 23, 224, 308, 344
AclWI	GGATC	6 cut(s)	783, 925, 1015, 1310, 1412, 1425
AcoI	YGGCCR	3 cut(s)	15, 351, 811
AcsI	RAATTY	5 cut(s)	461, 514, 612, 719, 1065
AcuI	CTGAAG	2 cut(s)	383, 1397
AcyI	GRCGYC	1 cut(s)	194
AfaI	GTAC	4 cut(s)	657, 770, 1161, 1496
AfiI	CCNNNNNNNGG	6 cut(s)	274, 355, 560, 737, 1239, 1373
AgsI	TTSAA	6 cut(s)	37, 325, 542, 1032, 1252, 1345
AjnI	CCWGG	4 cut(s)	348, 553, 730, 1005
AjuI	GAANNNNNNNTTGG	2 cut(s)	792, 824
AluBI	AGCT	4 cut(s)	65, 361, 511, 1260
AluI	AGCT	4 cut(s)	65, 361, 511, 1260
Alw26I	GTCTC	1 cut(s)	231
AlwI	GGATC	6 cut(s)	783, 925, 1015, 1310, 1412, 1425
Ama87I	CYCGRG	2 cut(s)	822, 1076
AoxI	GGCC	7 cut(s)	6, 15, 351, 590, 620, 811, 1400
ApeKI	GCWGC	4 cut(s)	1121, 1126, 1260, 1288
ApoI	RAATTY	5 cut(s)	461, 514, 612, 719, 1065
AseI	ATTAAT	1 cut(s)	1044
AspLEI	GCGC	4 cut(s)	196, 308, 907, 1126
AspS9I	GGNCC	2 cut(s)	7, 1180
AsuC2I	CCSGG	1 cut(s)	269
AsuHPI	GGTGA	6 cut(s)	76, 240, 413, 542, 977, 1592
AsuII	TTCGAA	1 cut(s)	610
AvaI	CYCGRG	2 cut(s)	822, 1076
AvaII	GGWCC	1 cut(s)	1180
BalI	TGGCCA	1 cut(s)	813
BamHI	GGATCC	1 cut(s)	1417
BanI	GGYRCC	3 cut(s)	193, 583, 863
BarI	GAAGNNNNNNTAC	2 cut(s)	1137, 1169
BauI	CACGAG	1 cut(s)	1053
BbsI	GAAGAC	1 cut(s)	44
BbvCI	CCTCAGC	1 cut(s)	1485
BbvI	GCAGC	4 cut(s)	1133, 1138, 1247, 1300
BccI	CCATC	2 cut(s)	277, 383
BceAI	ACGGC	4 cut(s)	56, 319, 421, 1497
BciT130I	CCWGG	4 cut(s)	350, 555, 732, 1007
BciVI	GTATCC	1 cut(s)	1008
BclI	TGATCA	1 cut(s)	454
BcnI	CCSGG	1 cut(s)	269
BcoDI	GTCTC	1 cut(s)	231
BfaI	CTAG	2 cut(s)	944, 1464
BfoI	RGCGCY	2 cut(s)	197, 908
BfuI	GTATCC	1 cut(s)	1008
BglI	GCCNNNNNGGC	3 cut(s)	14, 23, 1408
BglII	AGATCT	1 cut(s)	30
BisI	GCNGC	8 cut(s)	15, 24, 239, 242, 1122, 1127, 1261, 1289
BlsI	GCNGC	8 cut(s)	16, 25, 240, 243, 1123, 1128, 1262, 1290
BmcAI	AGTACT	2 cut(s)	770, 1496
Bme1390I	CCNGG	5 cut(s)	269, 350, 555, 732, 1007
Bme18I	GGWCC	1 cut(s)	1180
BmeT110I	CYCGRG	2 cut(s)	822, 1076
BmgT120I	GGNCC	2 cut(s)	7, 1180
BmiI	GGNNCC	4 cut(s)	195, 585, 865, 1419
BmrFI	CCNGG	5 cut(s)	269, 350, 555, 732, 1007
BmsI	GCATC	4 cut(s)	194, 864, 1362, 1441
BpiI	GAAGAC	1 cut(s)	44
BpmI	CTGGAG	3 cut(s)	576, 753, 1418
Bpu10I	CCTNAGC	1 cut(s)	1485
Bpu14I	TTCGAA	1 cut(s)	610
BpuMI	CCSGG	1 cut(s)	269
BsaHI	GRCGYC	1 cut(s)	194
BsaJI	CCNNGG	5 cut(s)	21, 267, 354, 587, 617
BsaXI	ACNNNNNCTCC	6 cut(s)	95, 125, 385, 415, 1374, 1404
Bsc4I	CCNNNNNNNGG	6 cut(s)	274, 355, 560, 737, 1239, 1373
Bse1I	ACTGG	2 cut(s)	934, 1502
Bse3DI	GCAATG	1 cut(s)	415
BseBI	CCWGG	4 cut(s)	350, 555, 732, 1007
BseDI	CCNNGG	5 cut(s)	21, 267, 354, 587, 617
BseGI	GGATG	4 cut(s)	288, 394, 502, 1230
BseLI	CCNNNNNNNGG	6 cut(s)	274, 355, 560, 737, 1239, 1373
BseMI	GCAATG	1 cut(s)	415
BseMII	CTCAG	5 cut(s)	513, 638, 800, 1085, 1476
BseNI	ACTGG	2 cut(s)	934, 1502
BseRI	GAGGAG	7 cut(s)	124, 127, 130, 133, 219, 332, 371
BseXI	GCAGC	4 cut(s)	1133, 1138, 1247, 1300
BseYI	CCCAGC	1 cut(s)	1200
BsgI	GTGCAG	1 cut(s)	1307
Bsh1236I	CGCG	5 cut(s)	14, 23, 224, 308, 344
BshFI	GGCC	7 cut(s)	8, 17, 353, 592, 622, 813, 1402
BshNI	GGYRCC	3 cut(s)	193, 583, 863
BsiHKCI	CYCGRG	2 cut(s)	822, 1076
BsiSI	CCGG	3 cut(s)	191, 197, 269
BslI	CCNNNNNNNGG	6 cut(s)	274, 355, 560, 737, 1239, 1373
BsmAI	GTCTC	1 cut(s)	231
BsmBI	CGTCTC	1 cut(s)	231
BsmI	GAATGC	1 cut(s)	373
BsnI	GGCC	7 cut(s)	8, 17, 353, 592, 622, 813, 1402
BsoBI	CYCGRG	2 cut(s)	822, 1076
Bsp119I	TTCGAA	1 cut(s)	610
Bsp143I	GATC	7 cut(s)	30, 454, 775, 930, 1020, 1315, 1417
BspANI	GGCC	7 cut(s)	8, 17, 353, 592, 622, 813, 1402
BspCNI	CTCAG	5 cut(s)	514, 637, 799, 1086, 1477
BspFNI	CGCG	5 cut(s)	14, 23, 224, 308, 344
BspLI	GGNNCC	4 cut(s)	195, 585, 865, 1419
BspPI	GGATC	6 cut(s)	783, 925, 1015, 1310, 1412, 1425
BspQI	GCTCTTC	1 cut(s)	1602
BspT104I	TTCGAA	1 cut(s)	610
BspT107I	GGYRCC	3 cut(s)	193, 583, 863
BsrBI	CCGCTC	2 cut(s)	280, 375
BsrDI	GCAATG	1 cut(s)	415
BsrI	ACTGG	2 cut(s)	934, 1502
BssECI	CCNNGG	5 cut(s)	21, 267, 354, 587, 617
BssMI	GATC	7 cut(s)	30, 454, 775, 930, 1020, 1315, 1417
BssNI	GRCGYC	1 cut(s)	194
BssSI	CACGAG	1 cut(s)	1053
BssT1I	CCWWGG	1 cut(s)	617
Bst2BI	CACGAG	1 cut(s)	1053
Bst2UI	CCWGG	4 cut(s)	350, 555, 732, 1007
Bst4CI	ACNGT	3 cut(s)	480, 747, 1028
Bst6I	CTCTTC	2 cut(s)	95, 1602
BstACI	GRCGYC	1 cut(s)	194
BstAPI	GCANNNNNTGC	1 cut(s)	977
BstBI	TTCGAA	1 cut(s)	610
BstC8I	GCNNGC	5 cut(s)	346, 373, 960, 1351, 1404
BstDEI	CTNAG	6 cut(s)	522, 624, 786, 1094, 1268, 1485
BstDSI	CCRYGG	1 cut(s)	21
BstEII	GGTNACC	1 cut(s)	1362
BstENI	CCTNNNNNAGG	2 cut(s)	353, 558
BstF5I	GGATG	4 cut(s)	288, 394, 502, 1230
BstFNI	CGCG	5 cut(s)	14, 23, 224, 308, 344
BstH2I	RGCGCY	2 cut(s)	197, 908
BstHHI	GCGC	4 cut(s)	196, 308, 907, 1126
BstKTI	GATC	7 cut(s)	33, 457, 778, 933, 1023, 1318, 1420
BstMAI	GTCTC	1 cut(s)	231
BstMBI	GATC	7 cut(s)	30, 454, 775, 930, 1020, 1315, 1417
BstNI	CCWGG	4 cut(s)	350, 555, 732, 1007
BstNSI	RCATGY	1 cut(s)	1353
BstPI	GGTNACC	1 cut(s)	1362
BstSCI	CCNGG	5 cut(s)	267, 348, 553, 730, 1005
BstUI	CGCG	5 cut(s)	14, 23, 224, 308, 344
BstV1I	GCAGC	4 cut(s)	1133, 1138, 1247, 1300
BstV2I	GAAGAC	1 cut(s)	44
BstX2I	RGATCY	3 cut(s)	30, 930, 1417
BstYI	RGATCY	3 cut(s)	30, 930, 1417
BsuI	GTATCC	1 cut(s)	1008
BsuRI	GGCC	7 cut(s)	8, 17, 353, 592, 622, 813, 1402
BtgI	CCRYGG	1 cut(s)	21
BtgZI	GCGATG	1 cut(s)	323
BtsCI	GGATG	4 cut(s)	288, 394, 502, 1230
BtsI	GCAGTG	1 cut(s)	978
BtsIMutI	CAGTG	3 cut(s)	465, 978, 1024
Cac8I	GCNNGC	5 cut(s)	346, 373, 960, 1351, 1404
CfoI	GCGC	4 cut(s)	196, 308, 907, 1126
Cfr13I	GGNCC	2 cut(s)	7, 1180
Cfr42I	CCGCGG	1 cut(s)	24
CseI	GACGC	2 cut(s)	213, 350
Csp6I	GTAC	4 cut(s)	656, 769, 1160, 1495
CspCI	CAANNNNNGTGG	2 cut(s)	397, 432
CviAII	CATG	5 cut(s)	755, 920, 1142, 1350, 1570
CviQI	GTAC	4 cut(s)	656, 769, 1160, 1495
DdeI	CTNAG	6 cut(s)	522, 624, 786, 1094, 1268, 1485
DinI	GGCGCC	1 cut(s)	195
DpnI	GATC	7 cut(s)	32, 456, 777, 932, 1022, 1317, 1419
DpnII	GATC	7 cut(s)	30, 454, 775, 930, 1020, 1315, 1417
DrdI	GACNNNNNNGTC	1 cut(s)	895
DseDI	GACNNNNNNGTC	1 cut(s)	895
EaeI	YGGCCR	3 cut(s)	15, 351, 811
Eam1104I	CTCTTC	2 cut(s)	95, 1602
EarI	CTCTTC	2 cut(s)	95, 1602
EciI	GGCGGA	4 cut(s)	41, 157, 246, 753
Eco130I	CCWWGG	1 cut(s)	617
Eco47I	GGWCC	1 cut(s)	1180
Eco57I	CTGAAG	2 cut(s)	383, 1397
Eco88I	CYCGRG	2 cut(s)	822, 1076
Eco91I	GGTNACC	1 cut(s)	1362
EcoNI	CCTNNNNNAGG	2 cut(s)	353, 558
EcoO109I	RGGNCCY	2 cut(s)	7, 1180
EcoO65I	GGTNACC	1 cut(s)	1362
EcoRI	GAATTC	2 cut(s)	514, 612
EcoRII	CCWGG	4 cut(s)	348, 553, 730, 1005
EcoT14I	CCWWGG	1 cut(s)	617
EcoT22I	ATGCAT	1 cut(s)	1355
EgeI	GGCGCC	1 cut(s)	195
EheI	GGCGCC	1 cut(s)	195
ErhI	CCWWGG	1 cut(s)	617
Esp3I	CGTCTC	1 cut(s)	231
FaeI	CATG	5 cut(s)	758, 923, 1145, 1353, 1573
FalI	AAGNNNNNCTT	2 cut(s)	994, 1026
FatI	CATG	5 cut(s)	754, 919, 1141, 1349, 1569
FauI	CCCGC	1 cut(s)	229
FauNDI	CATATG	1 cut(s)	1235
FbaI	TGATCA	1 cut(s)	454
Fnu4HI	GCNGC	8 cut(s)	15, 24, 239, 242, 1122, 1127, 1261, 1289
FokI	GGATG	4 cut(s)	295, 401, 509, 1237
Fsp4HI	GCNGC	8 cut(s)	15, 24, 239, 242, 1122, 1127, 1261, 1289
FspBI	CTAG	2 cut(s)	944, 1464
GlaI	GCGC	4 cut(s)	195, 307, 906, 1125
GluI	GCNGC	8 cut(s)	15, 24, 239, 242, 1122, 1127, 1261, 1289
GsaI	CCCAGC	1 cut(s)	1204
GsuI	CTGGAG	3 cut(s)	576, 753, 1418
HaeII	RGCGCY	2 cut(s)	197, 908
HaeIII	GGCC	7 cut(s)	8, 17, 353, 592, 622, 813, 1402
HapII	CCGG	3 cut(s)	191, 197, 269
HgaI	GACGC	2 cut(s)	213, 350
HhaI	GCGC	4 cut(s)	196, 308, 907, 1126
Hin1I	GRCGYC	1 cut(s)	194
Hin1II	CATG	5 cut(s)	758, 923, 1145, 1353, 1573
Hin6I	GCGC	4 cut(s)	194, 306, 905, 1124
HinP1I	GCGC	4 cut(s)	194, 306, 905, 1124
HincII	GTYRAC	1 cut(s)	1084
HindII	GTYRAC	1 cut(s)	1084
HinfI	GANTC	6 cut(s)	200, 607, 793, 1051, 1304, 1431
HpaII	CCGG	3 cut(s)	191, 197, 269
HphI	GGTGA	6 cut(s)	76, 240, 413, 542, 977, 1592
Hpy166II	GTNNAC	2 cut(s)	295, 1084
Hpy188I	TCNGA	6 cut(s)	316, 459, 606, 627, 780, 789
Hpy8I	GTNNAC	2 cut(s)	295, 1084
Hpy99I	CGWCG	3 cut(s)	49, 77, 344
HpyAV	CCTTC	7 cut(s)	139, 255, 379, 554, 1210, 1214, 1339
HpyCH4III	ACNGT	3 cut(s)	480, 747, 1028
HpyCH4IV	ACGT	1 cut(s)	47
HpyCH4V	TGCA	7 cut(s)	806, 877, 941, 980, 1288, 1353, 1406
HpyF3I	CTNAG	6 cut(s)	522, 624, 786, 1094, 1268, 1485
HpySE526I	ACGT	1 cut(s)	47
Hsp92I	GRCGYC	1 cut(s)	194
Hsp92II	CATG	5 cut(s)	758, 923, 1145, 1353, 1573
HspAI	GCGC	4 cut(s)	194, 306, 905, 1124
KasI	GGCGCC	1 cut(s)	193
Ksp22I	TGATCA	1 cut(s)	454
KspI	CCGCGG	1 cut(s)	24
Kzo9I	GATC	7 cut(s)	30, 454, 775, 930, 1020, 1315, 1417
LguI	GCTCTTC	1 cut(s)	1602
LmnI	GCTCC	3 cut(s)	277, 358, 1382
Lsp1109I	GCAGC	4 cut(s)	1133, 1138, 1247, 1300
LweI	GCATC	4 cut(s)	194, 864, 1362, 1441
MaeI	CTAG	2 cut(s)	944, 1464
MaeII	ACGT	1 cut(s)	47
MaeIII	GTNAC	3 cut(s)	401, 886, 1362
MalI	GATC	7 cut(s)	32, 456, 777, 932, 1022, 1317, 1419
MbiI	CCGCTC	2 cut(s)	280, 375
MboI	GATC	7 cut(s)	30, 454, 775, 930, 1020, 1315, 1417
MboII	GAAGA	7 cut(s)	49, 82, 376, 689, 1157, 1468, 1589
MflI	RGATCY	3 cut(s)	30, 930, 1417
MlsI	TGGCCA	1 cut(s)	813
MluNI	TGGCCA	1 cut(s)	813
Mly113I	GGCGCC	1 cut(s)	194
MlyI	GAGTC	2 cut(s)	1045, 1425
MmeI	TCCRAC	1 cut(s)	294
Mox20I	TGGCCA	1 cut(s)	813
Mph1103I	ATGCAT	1 cut(s)	1355
MscI	TGGCCA	1 cut(s)	813
MseI	TTAA	7 cut(s)	429, 504, 708, 1044, 1511, 1547, 1606
Msp20I	TGGCCA	1 cut(s)	813
MspA1I	CMGCKG	2 cut(s)	23, 1260
MspI	CCGG	3 cut(s)	191, 197, 269
MspR9I	CCNGG	5 cut(s)	269, 350, 555, 732, 1007
Mva1269I	GAATGC	1 cut(s)	373
MvaI	CCWGG	4 cut(s)	350, 555, 732, 1007
MvnI	CGCG	5 cut(s)	14, 23, 224, 308, 344
NarI	GGCGCC	1 cut(s)	194
NciI	CCSGG	1 cut(s)	269
NdeI	CATATG	1 cut(s)	1235
NdeII	GATC	7 cut(s)	30, 454, 775, 930, 1020, 1315, 1417
NlaIII	CATG	5 cut(s)	758, 923, 1145, 1353, 1573
NlaIV	GGNNCC	4 cut(s)	195, 585, 865, 1419
NmeAIII	GCCGAG	2 cut(s)	379, 612
NmuCI	GTSAC	2 cut(s)	401, 886
NsiI	ATGCAT	1 cut(s)	1355
NspI	RCATGY	1 cut(s)	1353
NspV	TTCGAA	1 cut(s)	610
PaeI	GCATGC	1 cut(s)	1353
PaeR7I	CTCGAG	1 cut(s)	1076
PciSI	GCTCTTC	1 cut(s)	1602
PcsI	WCGNNNNNNNCGW	1 cut(s)	336
PctI	GAATGC	1 cut(s)	373
PfeI	GAWTC	4 cut(s)	200, 607, 793, 1304
PfoI	TCCNGGA	2 cut(s)	553, 730
PkrI	GCNGC	8 cut(s)	16, 25, 240, 243, 1123, 1128, 1262, 1290
PleI	GAGTC	2 cut(s)	1045, 1425
PluTI	GGCGCC	1 cut(s)	197
PpsI	GAGTC	2 cut(s)	1045, 1425
PpuMI	RGGWCCY	1 cut(s)	1180
PshBI	ATTAAT	1 cut(s)	1044
PsiI	TTATAA	2 cut(s)	1137, 1211
Psp5II	RGGWCCY	1 cut(s)	1180
Psp6I	CCWGG	4 cut(s)	348, 553, 730, 1005
PspEI	GGTNACC	1 cut(s)	1362
PspFI	CCCAGC	1 cut(s)	1200
PspGI	CCWGG	4 cut(s)	348, 553, 730, 1005
PspN4I	GGNNCC	4 cut(s)	195, 585, 865, 1419
PspPI	GGNCC	2 cut(s)	7, 1180
PspPPI	RGGWCCY	1 cut(s)	1180
PsuI	RGATCY	3 cut(s)	30, 930, 1417
PvuII	CAGCTG	1 cut(s)	1260
RsaI	GTAC	4 cut(s)	657, 770, 1161, 1496
RsaNI	GTAC	4 cut(s)	656, 769, 1160, 1495
SacII	CCGCGG	1 cut(s)	24
SapI	GCTCTTC	1 cut(s)	1602
SaqAI	TTAA	7 cut(s)	429, 504, 708, 1044, 1511, 1547, 1606
SatI	GCNGC	8 cut(s)	15, 24, 239, 242, 1122, 1127, 1261, 1289
Sau3AI	GATC	7 cut(s)	30, 454, 775, 930, 1020, 1315, 1417
Sau96I	GGNCC	2 cut(s)	7, 1180
ScaI	AGTACT	2 cut(s)	770, 1496
SchI	GAGTC	2 cut(s)	1045, 1425
ScrFI	CCNGG	5 cut(s)	269, 350, 555, 732, 1007
SfaNI	GCATC	4 cut(s)	194, 864, 1362, 1441
SfiI	GGCCNNNNNGGCC	1 cut(s)	14
SfoI	GGCGCC	1 cut(s)	195
Sfr274I	CTCGAG	1 cut(s)	1076
Sfr303I	CCGCGG	1 cut(s)	24
SfuI	TTCGAA	1 cut(s)	610
SgrBI	CCGCGG	1 cut(s)	24
SinI	GGWCC	1 cut(s)	1180
SlaI	CTCGAG	1 cut(s)	1076
SmlI	CTYRAG	1 cut(s)	1076
SmoI	CTYRAG	1 cut(s)	1076
SphI	GCATGC	1 cut(s)	1353
SspDI	GGCGCC	1 cut(s)	193
SspI	AATATT	1 cut(s)	1509
SspMI	CTAG	2 cut(s)	944, 1464
StyD4I	CCNGG	5 cut(s)	267, 348, 553, 730, 1005
StyI	CCWWGG	1 cut(s)	617
TaaI	ACNGT	3 cut(s)	480, 747, 1028
TaiI	ACGT	1 cut(s)	50
TaqI	TCGA	6 cut(s)	339, 518, 610, 675, 1077, 1281
TatI	WGTACW	3 cut(s)	768, 1159, 1494
TauI	GCSGC	4 cut(s)	17, 26, 241, 244
TfiI	GAWTC	4 cut(s)	200, 607, 793, 1304
Tru1I	TTAA	7 cut(s)	429, 504, 708, 1044, 1511, 1547, 1606
Tru9I	TTAA	7 cut(s)	429, 504, 708, 1044, 1511, 1547, 1606
TscAI	CASTG	3 cut(s)	472, 978, 1031
TseFI	GTSAC	2 cut(s)	401, 886
TseI	GCWGC	4 cut(s)	1121, 1126, 1260, 1288
Tsp45I	GTSAC	2 cut(s)	401, 886
TspDTI	ATGAA	5 cut(s)	17, 40, 743, 1158, 1518
TspGWI	ACGGA	2 cut(s)	895, 1077
TspRI	CASTG	3 cut(s)	472, 978, 1031
VpaK11BI	GGWCC	1 cut(s)	1180
VspI	ATTAAT	1 cut(s)	1044
XagI	CCTNNNNNAGG	2 cut(s)	353, 558
XapI	RAATTY	5 cut(s)	461, 514, 612, 719, 1065
XbaI	TCTAGA	1 cut(s)	1463
XceI	RCATGY	1 cut(s)	1353
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1326
XhoI	CTCGAG	1 cut(s)	1076
XspI	CTAG	2 cut(s)	944, 1464
ZrmI	AGTACT	2 cut(s)	770, 1496
Zsp2I	ATGCAT	1 cut(s)	1355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.