Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0011820

Physical Location & Seq

Genomic Coordinates Forward (+)

57629154 .. 57632748

Gene Structure 3595 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG378000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGAAGGCCCTCGCGGCCACCGCGGCGGAGATCGTGAAGAACCCGACGTTCATTAAAATTACAGCTATTGCCATCGCCTCCTTCACCCTCTTCGTCCTCGCCAACCACTACTCCGCTTCCTACTCTCCCTTCTCCTCCTCCACCGCCACAACCTCCGCCACTCACTCTCTCGCATCTCCGGCGCCGGAATCCTCTCCACCGACACCTCCCGCGTCTCCTCCACCGCCGCCGCCTTCACCGCCTCCGCCTCCACCCCCGGAGGTGGAGAGGATGGGGATAGTGGACGAGAACGGCGCGATGTCGGAGGAGTTCAAGGTCGGCGAGTTCGACGCGACCCTGGCCGAGGAGCTGAAGAATGCGAGCGGTGGAGTGAAGGATGGGAGTGGCGGTGACGGCAATGGCGGTGGTGTTAGGGTTAAGATTGACAAGTATGGGGTGTGTGATCAGAAATTCACTGATTATATACCGTGTTTGGACAATGTGGATGAGATTAAGAAGCTGAACTCGACTGAGAGAGGTGAAAAGTTTGAAAGGCATTGTCCTGGAGAAGGCAAGAGGCTGAATTGCTTGGTGCCGAGGCCGAAAGGGTATCAGATTCGAATTCCTTGGCCTCAGAGCAGAGATGAGGTGTGGTTCAGTAATGTACCCCATACAAGACTTGTCGAAGATAAAGGTGGTCAAAATTGGATAGCGATTAAGAAAGATAAATTTGTGTTTCCTGGAGGTGGAACACAGTTTATTCATGGGGCAAATGAGTACTTGGATCAGATTTCTCAGATGATTCCTGAAATTGCATTTGGCCACAAGACCCGAGTAGCGTTAGATGTTGGTTGTGGAGTAGCGAGTTTTGGTGCCTTTTTGATGCAACGGAATGTGACCACTCTGTCAGTAGCGCCAAAAGATGTCCATGAGAACCAGATCCAGTTTGCACTAGAGCGTGGTGTGCCTGCTATGGTGGCAGTGTTTGCAACTCACCGCTTGTTGTATCCAAGCCAGGCTTTTGACTTGATTCACTGTTCAAGATGTAGAATTAATTGGACTCGTGATGATGGAATTTGGCTTCTCGAGGTTGACAGGTTGCTGAGAGCAGGAGGATATTTTGTTTGGGCAGCGCAGCCTGTTTATAAACATGAAGAAGCCCTACAAGTACAATGGAAAGAAATGGAGGACCTGACTACACGCATTTGCTGGGAACTTATAAAGAAGGAAGGGATGATTGCCATATGGAGGAAACCTTTGAACAACAGCTGCTATCTTAGTCGTGATGTCGAAGTGCAGCCTCCATTATGTGATTCCAATGATGATCCAGACAATGTTTGGTATGTTGGTTTGAAGGCATGCATCACTCGGTTACCTGAAAATGGTTATGGAGCAAATGTTTCTTTGTGGCCTGCAAGGCTTCAGGATCCACCAGACAGACTCCAGAGCATACGATTAGATGCCTATATATCTAGAAAAGAAATCTTCACGGCTGAGGCAAAGTACTGGAATGAAATATTAACAGGTTATGTTGGTGCTTACCATTGGAAAGAGTTAAACTTTAGAAACATAATGGACATGAGGGCTGGATATGGAGGGTTTGCAGCAGCATTGCATGACCACGGACTAGATTGTTGGGTAATGAATGTTGTTCCCGTTTCTGGGTTCAACACCTTACCAGTTATTTATGACCGTGGACTTATCGGAGTAATGCATGACTGGTGTGAGCCATTTGACACTTATCCAAGAACATATGACTTATTGCACGCAGCGGGTCTCTTCTCTATCGAGCAAAAGAGGTGTAATATCTCAACCATCATTCTTGAAATGGATCGAATGTTAAGGCCTGGGGGACGCGTTTATATACGTGACTCTGTGTCTGTAATCGGTGAGCTTCACGAACTTGCAAATGCGGTTGGATGGGTGCCTGCACTACACGATACCGGAGAAGGACCCCATGCAAGCTGGAAGATCTTAATAGGTGACAAGCGTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0016740 GO:0016741 GO:0032259 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

658

Amino Acids

73.32

Weight (kDa)

5.94

Isoelectric Point (pI)

41.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	153 - 656	1e-226	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	274 - 368	4.6e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77260
fragaria_vesca	FvH4_2g28020
malus_domestica	MD15G1132900.v1.1
prunus_persica	Prupe.1G488500_v2.0.a1 Prupe.1G488500_v2.0.a1
pyrus_communis	pycom15g11980
rosa_chinensis	RchiOBHm_Chr6g0296881
rosa_laevigata	RLG00000011649
rosa_multiflora	Rmu_co8446841.1_g000001 Rmu_sc0033097.1_g000001 Rmu_sc0038066.1_g000001
rosa_roxburghii	Rroxscaffold_7G00171060
rosa_rugosa	Rorug06G0267200 Rorug06G0267300
rosa_samantha	Rh6AG378000 Rh6BG386000 Rh6CG391400 Rh6DG378700
rosa_wichuraiana	Rw6G033040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1125, 1199
AasI	GACNNNNNNGTC	1 cut(s)	883
AccB1I	GGYRCC	4 cut(s)	181, 571, 851, 1903
AccBSI	CCGCTC	1 cut(s)	363
AccII	CGCG	6 cut(s)	14, 23, 212, 296, 332, 1836
AclWI	GGATC	6 cut(s)	771, 913, 1298, 1400, 1413, 1818
AcoI	YGGCCR	3 cut(s)	15, 339, 799
AcsI	RAATTY	4 cut(s)	449, 600, 707, 1053
AcuI	CTGAAG	2 cut(s)	371, 1385
AcyI	GRCGYC	1 cut(s)	182
AfaI	GTAC	4 cut(s)	645, 758, 1149, 1484
AfiI	CCNNNNNNNGG	8 cut(s)	262, 343, 548, 725, 1227, 1361, 1640, 1641
AflIII	ACRYGT	1 cut(s)	1834
AgsI	TTSAA	7 cut(s)	313, 530, 1020, 1240, 1333, 1648, 1805
AhdI	GACNNNNNGTC	1 cut(s)	1855
AjnI	CCWGG	5 cut(s)	336, 541, 718, 993, 1825
AjuI	GAANNNNNNNTTGG	2 cut(s)	780, 812
AluBI	AGCT	6 cut(s)	65, 349, 499, 1248, 1873, 1944
AluI	AGCT	6 cut(s)	65, 349, 499, 1248, 1873, 1944
Alw26I	GTCTC	2 cut(s)	219, 1760
AlwI	GGATC	6 cut(s)	771, 913, 1298, 1400, 1413, 1818
Ama87I	CYCGRG	2 cut(s)	810, 1064
AoxI	GGCC	8 cut(s)	6, 15, 339, 578, 608, 799, 1388, 1823
ApeKI	GCWGC	7 cut(s)	1109, 1114, 1248, 1276, 1583, 1586, 1748
ApoI	RAATTY	4 cut(s)	449, 600, 707, 1053
AseI	ATTAAT	1 cut(s)	1032
AspLEI	GCGC	4 cut(s)	184, 296, 895, 1114
AspS9I	GGNCC	3 cut(s)	7, 1168, 1931
AsuC2I	CCSGG	1 cut(s)	257
AsuHPI	GGTGA	7 cut(s)	76, 228, 401, 530, 965, 1880, 1973
AsuII	TTCGAA	1 cut(s)	598
AvaI	CYCGRG	2 cut(s)	810, 1064
AvaII	GGWCC	2 cut(s)	1168, 1931
BalI	TGGCCA	1 cut(s)	801
BamHI	GGATCC	1 cut(s)	1405
BanI	GGYRCC	4 cut(s)	181, 571, 851, 1903
BarI	GAAGNNNNNNTAC	2 cut(s)	1125, 1157
BauI	CACGAG	1 cut(s)	1041
BbvCI	CCTCAGC	1 cut(s)	1473
BbvI	GCAGC	7 cut(s)	1121, 1126, 1235, 1288, 1595, 1598, 1760
BccI	CCATC	6 cut(s)	80, 265, 371, 1043, 1802, 1893
BceAI	ACGGC	3 cut(s)	307, 409, 1485
BciT130I	CCWGG	5 cut(s)	338, 543, 720, 995, 1827
BciVI	GTATCC	1 cut(s)	996
BclI	TGATCA	1 cut(s)	442
BcnI	CCSGG	1 cut(s)	257
BcoDI	GTCTC	2 cut(s)	219, 1760
BfaI	CTAG	3 cut(s)	932, 1452, 1607
BfoI	RGCGCY	2 cut(s)	185, 896
BfuI	GTATCC	1 cut(s)	996
BglI	GCCNNNNNGGC	3 cut(s)	14, 23, 1396
BglII	AGATCT	1 cut(s)	1950
BmcAI	AGTACT	2 cut(s)	758, 1484
Bme1390I	CCNGG	6 cut(s)	257, 338, 543, 720, 995, 1827
Bme18I	GGWCC	2 cut(s)	1168, 1931
BmeRI	GACNNNNNGTC	1 cut(s)	1855
BmeT110I	CYCGRG	2 cut(s)	810, 1064
BmgT120I	GGNCC	3 cut(s)	7, 1168, 1931
BmiI	GGNNCC	6 cut(s)	183, 573, 853, 1407, 1905, 1933
BmrFI	CCNGG	6 cut(s)	257, 338, 543, 720, 995, 1827
BmsI	GCATC	4 cut(s)	182, 852, 1350, 1429
BpmI	CTGGAG	3 cut(s)	564, 741, 1406
Bpu10I	CCTNAGC	1 cut(s)	1473
Bpu14I	TTCGAA	1 cut(s)	598
BpuMI	CCSGG	1 cut(s)	257
BsaAI	YACGTR	1 cut(s)	1847
BsaHI	GRCGYC	1 cut(s)	182
BsaI	GGTCTC	1 cut(s)	1760
BsaJI	CCNNGG	9 cut(s)	21, 255, 336, 342, 575, 605, 1600, 1672, 1826
BsaWI	WCCGGW	1 cut(s)	1922
BsaXI	ACNNNNNCTCC	6 cut(s)	95, 125, 373, 403, 1362, 1392
Bsc4I	CCNNNNNNNGG	8 cut(s)	262, 343, 548, 725, 1227, 1361, 1640, 1641
Bse1I	ACTGG	4 cut(s)	922, 1490, 1658, 1703
Bse3DI	GCAATG	2 cut(s)	403, 1589
BseBI	CCWGG	5 cut(s)	338, 543, 720, 995, 1827
BseDI	CCNNGG	9 cut(s)	21, 255, 336, 342, 575, 605, 1600, 1672, 1826
BseGI	GGATG	5 cut(s)	276, 382, 490, 1218, 1904
BseLI	CCNNNNNNNGG	8 cut(s)	262, 343, 548, 725, 1227, 1361, 1640, 1641
BseMI	GCAATG	2 cut(s)	403, 1589
BseMII	CTCAG	5 cut(s)	501, 626, 788, 1073, 1464
BseNI	ACTGG	4 cut(s)	922, 1490, 1658, 1703
BseRI	GAGGAG	5 cut(s)	124, 127, 207, 320, 359
BseXI	GCAGC	7 cut(s)	1121, 1126, 1235, 1288, 1595, 1598, 1760
BseYI	CCCAGC	1 cut(s)	1188
BsgI	GTGCAG	2 cut(s)	1295, 1893
Bsh1236I	CGCG	6 cut(s)	14, 23, 212, 296, 332, 1836
BshFI	GGCC	8 cut(s)	8, 17, 341, 580, 610, 801, 1390, 1825
BshNI	GGYRCC	4 cut(s)	181, 571, 851, 1903
BsiHKCI	CYCGRG	2 cut(s)	810, 1064
BsiSI	CCGG	4 cut(s)	179, 185, 257, 1923
BslFI	GGGAC	1 cut(s)	1845
BslI	CCNNNNNNNGG	8 cut(s)	262, 343, 548, 725, 1227, 1361, 1640, 1641
BsmAI	GTCTC	2 cut(s)	219, 1760
BsmBI	CGTCTC	1 cut(s)	219
BsmFI	GGGAC	1 cut(s)	1845
BsmI	GAATGC	1 cut(s)	361
BsnI	GGCC	8 cut(s)	8, 17, 341, 580, 610, 801, 1390, 1825
Bso31I	GGTCTC	1 cut(s)	1760
BsoBI	CYCGRG	2 cut(s)	810, 1064
Bsp119I	TTCGAA	1 cut(s)	598
Bsp143I	GATC	8 cut(s)	30, 442, 763, 918, 1303, 1405, 1810, 1950
BspANI	GGCC	8 cut(s)	8, 17, 341, 580, 610, 801, 1390, 1825
BspCNI	CTCAG	5 cut(s)	502, 625, 787, 1074, 1465
BspFNI	CGCG	6 cut(s)	14, 23, 212, 296, 332, 1836
BspLI	GGNNCC	6 cut(s)	183, 573, 853, 1407, 1905, 1933
BspPI	GGATC	6 cut(s)	771, 913, 1298, 1400, 1413, 1818
BspT104I	TTCGAA	1 cut(s)	598
BspT107I	GGYRCC	4 cut(s)	181, 571, 851, 1903
BspTNI	GGTCTC	1 cut(s)	1760
BsrBI	CCGCTC	1 cut(s)	363
BsrDI	GCAATG	2 cut(s)	403, 1589
BsrI	ACTGG	4 cut(s)	922, 1490, 1658, 1703
BssECI	CCNNGG	9 cut(s)	21, 255, 336, 342, 575, 605, 1600, 1672, 1826
BssMI	GATC	8 cut(s)	30, 442, 763, 918, 1303, 1405, 1810, 1950
BssNI	GRCGYC	1 cut(s)	182
BssSI	CACGAG	1 cut(s)	1041
BssT1I	CCWWGG	1 cut(s)	605
Bst2BI	CACGAG	1 cut(s)	1041
Bst2UI	CCWGG	5 cut(s)	338, 543, 720, 995, 1827
Bst4CI	ACNGT	4 cut(s)	468, 735, 1016, 1673
Bst6I	CTCTTC	2 cut(s)	95, 1763
BstACI	GRCGYC	1 cut(s)	182
BstAPI	GCANNNNNTGC	1 cut(s)	965
BstBAI	YACGTR	1 cut(s)	1847
BstBI	TTCGAA	1 cut(s)	598
BstC8I	GCNNGC	7 cut(s)	361, 948, 1339, 1392, 1746, 1908, 1942
BstDEI	CTNAG	6 cut(s)	510, 612, 774, 1082, 1256, 1473
BstDSI	CCRYGG	3 cut(s)	21, 1600, 1672
BstEII	GGTNACC	1 cut(s)	1350
BstENI	CCTNNNNNAGG	2 cut(s)	341, 546
BstF5I	GGATG	5 cut(s)	276, 382, 490, 1218, 1904
BstFNI	CGCG	6 cut(s)	14, 23, 212, 296, 332, 1836
BstH2I	RGCGCY	2 cut(s)	185, 896
BstHHI	GCGC	4 cut(s)	184, 296, 895, 1114
BstKTI	GATC	8 cut(s)	33, 445, 766, 921, 1306, 1408, 1813, 1953
BstMAI	GTCTC	2 cut(s)	219, 1760
BstMBI	GATC	8 cut(s)	30, 442, 763, 918, 1303, 1405, 1810, 1950
BstNI	CCWGG	5 cut(s)	338, 543, 720, 995, 1827
BstNSI	RCATGY	1 cut(s)	1341
BstPI	GGTNACC	1 cut(s)	1350
BstSCI	CCNGG	6 cut(s)	255, 336, 541, 718, 993, 1825
BstUI	CGCG	6 cut(s)	14, 23, 212, 296, 332, 1836
BstV1I	GCAGC	7 cut(s)	1121, 1126, 1235, 1288, 1595, 1598, 1760
BstX2I	RGATCY	3 cut(s)	918, 1405, 1950
BstYI	RGATCY	3 cut(s)	918, 1405, 1950
BsuI	GTATCC	1 cut(s)	996
BsuRI	GGCC	8 cut(s)	8, 17, 341, 580, 610, 801, 1390, 1825
BtgI	CCRYGG	3 cut(s)	21, 1600, 1672
BtgZI	GCGATG	2 cut(s)	58, 311
BtsCI	GGATG	5 cut(s)	276, 382, 490, 1218, 1904
BtsI	GCAGTG	1 cut(s)	966
BtsIMutI	CAGTG	3 cut(s)	453, 966, 1012
Cac8I	GCNNGC	7 cut(s)	361, 948, 1339, 1392, 1746, 1908, 1942
CfoI	GCGC	4 cut(s)	184, 296, 895, 1114
Cfr13I	GGNCC	3 cut(s)	7, 1168, 1931
Cfr42I	CCGCGG	1 cut(s)	24
CseI	GACGC	3 cut(s)	201, 338, 1842
Csp6I	GTAC	4 cut(s)	644, 757, 1148, 1483
CspCI	CAANNNNNGTGG	2 cut(s)	385, 420
CviAII	CATG	8 cut(s)	743, 908, 1130, 1338, 1558, 1595, 1694, 1937
CviQI	GTAC	4 cut(s)	644, 757, 1148, 1483
DdeI	CTNAG	6 cut(s)	510, 612, 774, 1082, 1256, 1473
DinI	GGCGCC	1 cut(s)	183
DpnI	GATC	8 cut(s)	32, 444, 765, 920, 1305, 1407, 1812, 1952
DpnII	GATC	8 cut(s)	30, 442, 763, 918, 1303, 1405, 1810, 1950
DrdI	GACNNNNNNGTC	1 cut(s)	883
DriI	GACNNNNNGTC	1 cut(s)	1855
DseDI	GACNNNNNNGTC	1 cut(s)	883
EaeI	YGGCCR	3 cut(s)	15, 339, 799
Eam1104I	CTCTTC	2 cut(s)	95, 1763
Eam1105I	GACNNNNNGTC	1 cut(s)	1855
EarI	CTCTTC	2 cut(s)	95, 1763
EciI	GGCGGA	3 cut(s)	41, 145, 234
Eco130I	CCWWGG	1 cut(s)	605
Eco147I	AGGCCT	1 cut(s)	1825
Eco31I	GGTCTC	1 cut(s)	1760
Eco47I	GGWCC	2 cut(s)	1168, 1931
Eco57I	CTGAAG	2 cut(s)	371, 1385
Eco88I	CYCGRG	2 cut(s)	810, 1064
Eco91I	GGTNACC	1 cut(s)	1350
EcoNI	CCTNNNNNAGG	2 cut(s)	341, 546
EcoO109I	RGGNCCY	3 cut(s)	7, 1168, 1931
EcoO65I	GGTNACC	1 cut(s)	1350
EcoRI	GAATTC	1 cut(s)	600
EcoRII	CCWGG	5 cut(s)	336, 541, 718, 993, 1825
EcoT14I	CCWWGG	1 cut(s)	605
EcoT22I	ATGCAT	2 cut(s)	1343, 1695
EgeI	GGCGCC	1 cut(s)	183
EheI	GGCGCC	1 cut(s)	183
ErhI	CCWWGG	1 cut(s)	605
Esp3I	CGTCTC	1 cut(s)	219
FaeI	CATG	8 cut(s)	746, 911, 1133, 1341, 1561, 1598, 1697, 1940
FalI	AAGNNNNNCTT	2 cut(s)	982, 1014
FaqI	GGGAC	1 cut(s)	1845
FatI	CATG	8 cut(s)	742, 907, 1129, 1337, 1557, 1594, 1693, 1936
FauI	CCCGC	2 cut(s)	217, 1744
FauNDI	CATATG	2 cut(s)	1223, 1732
FbaI	TGATCA	1 cut(s)	442
FokI	GGATG	5 cut(s)	283, 389, 497, 1225, 1911
FspBI	CTAG	3 cut(s)	932, 1452, 1607
GlaI	GCGC	4 cut(s)	183, 295, 894, 1113
GsaI	CCCAGC	1 cut(s)	1192
GsuI	CTGGAG	3 cut(s)	564, 741, 1406
HaeII	RGCGCY	2 cut(s)	185, 896
HaeIII	GGCC	8 cut(s)	8, 17, 341, 580, 610, 801, 1390, 1825
HapII	CCGG	4 cut(s)	179, 185, 257, 1923
HgaI	GACGC	3 cut(s)	201, 338, 1842
HhaI	GCGC	4 cut(s)	184, 296, 895, 1114
Hin1I	GRCGYC	1 cut(s)	182
Hin1II	CATG	8 cut(s)	746, 911, 1133, 1341, 1561, 1598, 1697, 1940
Hin6I	GCGC	4 cut(s)	182, 294, 893, 1112
HinP1I	GCGC	4 cut(s)	182, 294, 893, 1112
HincII	GTYRAC	1 cut(s)	1072
HindII	GTYRAC	1 cut(s)	1072
HinfI	GANTC	8 cut(s)	188, 595, 781, 1009, 1039, 1292, 1419, 1850
HpaII	CCGG	4 cut(s)	179, 185, 257, 1923
HphI	GGTGA	7 cut(s)	76, 228, 401, 530, 965, 1880, 1973
Hpy166II	GTNNAC	3 cut(s)	283, 1072, 1676
Hpy188I	TCNGA	7 cut(s)	304, 447, 594, 615, 768, 777, 1685
Hpy8I	GTNNAC	3 cut(s)	283, 1072, 1676
Hpy99I	CGWCG	2 cut(s)	49, 332
HpyAV	CCTTC	9 cut(s)	91, 139, 243, 367, 542, 1198, 1202, 1327, 1922
HpyCH4III	ACNGT	4 cut(s)	468, 735, 1016, 1673
HpyCH4IV	ACGT	2 cut(s)	47, 1846
HpyF3I	CTNAG	6 cut(s)	510, 612, 774, 1082, 1256, 1473
HpySE526I	ACGT	2 cut(s)	47, 1846
Hsp92I	GRCGYC	1 cut(s)	182
Hsp92II	CATG	8 cut(s)	746, 911, 1133, 1341, 1561, 1598, 1697, 1940
HspAI	GCGC	4 cut(s)	182, 294, 893, 1112
KasI	GGCGCC	1 cut(s)	181
Ksp22I	TGATCA	1 cut(s)	442
KspI	CCGCGG	1 cut(s)	24
Kzo9I	GATC	8 cut(s)	30, 442, 763, 918, 1303, 1405, 1810, 1950
LmnI	GCTCC	2 cut(s)	346, 1370
Lsp1109I	GCAGC	7 cut(s)	1121, 1126, 1235, 1288, 1595, 1598, 1760
LweI	GCATC	4 cut(s)	182, 852, 1350, 1429
MaeI	CTAG	3 cut(s)	932, 1452, 1607
MaeII	ACGT	2 cut(s)	47, 1846
MaeIII	GTNAC	5 cut(s)	389, 874, 1350, 1847, 1961
MalI	GATC	8 cut(s)	32, 444, 765, 920, 1305, 1407, 1812, 1952
MbiI	CCGCTC	1 cut(s)	363
MboI	GATC	8 cut(s)	30, 442, 763, 918, 1303, 1405, 1810, 1950
MboII	GAAGA	8 cut(s)	49, 82, 364, 677, 1145, 1456, 1750, 1960
MflI	RGATCY	3 cut(s)	918, 1405, 1950
MlsI	TGGCCA	1 cut(s)	801
MluI	ACGCGT	1 cut(s)	1834
MluNI	TGGCCA	1 cut(s)	801
Mly113I	GGCGCC	1 cut(s)	182
MlyI	GAGTC	3 cut(s)	1033, 1413, 1844
MmeI	TCCRAC	2 cut(s)	282, 1876
Mox20I	TGGCCA	1 cut(s)	801
Mph1103I	ATGCAT	2 cut(s)	1343, 1695
MscI	TGGCCA	1 cut(s)	801
MseI	TTAA	9 cut(s)	54, 417, 492, 696, 1032, 1499, 1535, 1820, 1955
Msp20I	TGGCCA	1 cut(s)	801
MspA1I	CMGCKG	3 cut(s)	23, 1248, 1751
MspI	CCGG	4 cut(s)	179, 185, 257, 1923
MspR9I	CCNGG	6 cut(s)	257, 338, 543, 720, 995, 1827
Mva1269I	GAATGC	1 cut(s)	361
MvaI	CCWGG	5 cut(s)	338, 543, 720, 995, 1827
MvnI	CGCG	6 cut(s)	14, 23, 212, 296, 332, 1836
NarI	GGCGCC	1 cut(s)	182
NciI	CCSGG	1 cut(s)	257
NdeI	CATATG	2 cut(s)	1223, 1732
NdeII	GATC	8 cut(s)	30, 442, 763, 918, 1303, 1405, 1810, 1950
NlaIII	CATG	8 cut(s)	746, 911, 1133, 1341, 1561, 1598, 1697, 1940
NlaIV	GGNNCC	6 cut(s)	183, 573, 853, 1407, 1905, 1933
NmeAIII	GCCGAG	2 cut(s)	367, 600
NmuCI	GTSAC	4 cut(s)	389, 874, 1847, 1961
NsiI	ATGCAT	2 cut(s)	1343, 1695
NspI	RCATGY	1 cut(s)	1341
NspV	TTCGAA	1 cut(s)	598
PaeI	GCATGC	1 cut(s)	1341
PaeR7I	CTCGAG	1 cut(s)	1064
PceI	AGGCCT	1 cut(s)	1825
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PctI	GAATGC	1 cut(s)	361
PfeI	GAWTC	5 cut(s)	188, 595, 781, 1009, 1292
PfoI	TCCNGGA	2 cut(s)	541, 718
PleI	GAGTC	3 cut(s)	1033, 1413, 1844
PluTI	GGCGCC	1 cut(s)	185
PpsI	GAGTC	3 cut(s)	1033, 1413, 1844
Ppu21I	YACGTR	1 cut(s)	1847
PpuMI	RGGWCCY	2 cut(s)	1168, 1931
PshBI	ATTAAT	1 cut(s)	1032
PsiI	TTATAA	2 cut(s)	1125, 1199
Psp5II	RGGWCCY	2 cut(s)	1168, 1931
Psp6I	CCWGG	5 cut(s)	336, 541, 718, 993, 1825
PspEI	GGTNACC	1 cut(s)	1350
PspFI	CCCAGC	1 cut(s)	1188
PspGI	CCWGG	5 cut(s)	336, 541, 718, 993, 1825
PspN4I	GGNNCC	6 cut(s)	183, 573, 853, 1407, 1905, 1933
PspPI	GGNCC	3 cut(s)	7, 1168, 1931
PspPPI	RGGWCCY	2 cut(s)	1168, 1931
PsuI	RGATCY	3 cut(s)	918, 1405, 1950
PvuII	CAGCTG	1 cut(s)	1248
RsaI	GTAC	4 cut(s)	645, 758, 1149, 1484
RsaNI	GTAC	4 cut(s)	644, 757, 1148, 1483
SacII	CCGCGG	1 cut(s)	24
SaqAI	TTAA	9 cut(s)	54, 417, 492, 696, 1032, 1499, 1535, 1820, 1955
Sau3AI	GATC	8 cut(s)	30, 442, 763, 918, 1303, 1405, 1810, 1950
Sau96I	GGNCC	3 cut(s)	7, 1168, 1931
ScaI	AGTACT	2 cut(s)	758, 1484
SchI	GAGTC	3 cut(s)	1033, 1413, 1844
ScrFI	CCNGG	6 cut(s)	257, 338, 543, 720, 995, 1827
SfaNI	GCATC	4 cut(s)	182, 852, 1350, 1429
SfiI	GGCCNNNNNGGCC	1 cut(s)	14
SfoI	GGCGCC	1 cut(s)	183
Sfr274I	CTCGAG	1 cut(s)	1064
Sfr303I	CCGCGG	1 cut(s)	24
SfuI	TTCGAA	1 cut(s)	598
SgrBI	CCGCGG	1 cut(s)	24
SinI	GGWCC	2 cut(s)	1168, 1931
SlaI	CTCGAG	1 cut(s)	1064
SmlI	CTYRAG	1 cut(s)	1064
SmoI	CTYRAG	1 cut(s)	1064
SphI	GCATGC	1 cut(s)	1341
SseBI	AGGCCT	1 cut(s)	1825
SspDI	GGCGCC	1 cut(s)	181
SspI	AATATT	1 cut(s)	1497
SspMI	CTAG	3 cut(s)	932, 1452, 1607
StuI	AGGCCT	1 cut(s)	1825
StyD4I	CCNGG	6 cut(s)	255, 336, 541, 718, 993, 1825
StyI	CCWWGG	1 cut(s)	605
TaaI	ACNGT	4 cut(s)	468, 735, 1016, 1673
TaiI	ACGT	2 cut(s)	50, 1849
TaqI	TCGA	8 cut(s)	327, 506, 598, 663, 1065, 1269, 1767, 1813
TatI	WGTACW	3 cut(s)	756, 1147, 1482
TauI	GCSGC	4 cut(s)	17, 26, 229, 232
TfiI	GAWTC	5 cut(s)	188, 595, 781, 1009, 1292
Tru1I	TTAA	9 cut(s)	54, 417, 492, 696, 1032, 1499, 1535, 1820, 1955
Tru9I	TTAA	9 cut(s)	54, 417, 492, 696, 1032, 1499, 1535, 1820, 1955
TscAI	CASTG	3 cut(s)	460, 966, 1019
TseFI	GTSAC	4 cut(s)	389, 874, 1847, 1961
TseI	GCWGC	7 cut(s)	1109, 1114, 1248, 1276, 1583, 1586, 1748
Tsp45I	GTSAC	4 cut(s)	389, 874, 1847, 1961
TspDTI	ATGAA	6 cut(s)	17, 40, 731, 1146, 1506, 1637
TspGWI	ACGGA	2 cut(s)	883, 1617
TspRI	CASTG	3 cut(s)	460, 966, 1019
VpaK11BI	GGWCC	2 cut(s)	1168, 1931
VspI	ATTAAT	1 cut(s)	1032
XagI	CCTNNNNNAGG	2 cut(s)	341, 546
XapI	RAATTY	4 cut(s)	449, 600, 707, 1053
XbaI	TCTAGA	1 cut(s)	1451
XceI	RCATGY	1 cut(s)	1341
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1314
XhoI	CTCGAG	1 cut(s)	1064
XspI	CTAG	3 cut(s)	932, 1452, 1607
ZrmI	AGTACT	2 cut(s)	758, 1484
Zsp2I	ATGCAT	2 cut(s)	1343, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.