Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0011820

Physical Location & Seq

Genomic Coordinates Reverse (-)

11444823 .. 11448791

Gene Structure 3969 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00171060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGAAGGCCCTCGCGGCCACCGCGGCGGAGATCTTGAAGACCCCGACGTTCATCAAAATTACAGCTATTGCCGTCGCCTCCCTCACCCTCTTCGTCCTCGCCAACCACTATTCCGCTTCATACTCTCCCTTCTCCTCCTCCTCCTCCACCGTCACCGCCACAACCTCCGCCACTCACTCTCTCGCATCTCCGGCGCCGGAATCCTCTCCACCGACACCTCCCGCGTCTCCTCCACCGCCTCCGCCTCCACCGCCGGAGGTGGAGAGGATGGGGATAGTGGACGAGAACGGCGCGATGTCGGAGGAGTTCAAGGTCGGCGAGTTCGACGCGAGCCTGGCCGATGAGCTGAAGAATGCGAGCGGTGGAGTGAAGGATGGGAGTGGCGGTGACGGCAATGGCGGTGGTGTTAGGGTTAAGATTGACAAGTTTGGGGTGTGTGATCAGAAATTCACTGACTATATACCGTGTTTGGACAATGTGGATGAGATTAAGAAGCTGAACTCGACTGAGAGAGGTGAAAAGTTTGAAAGGCATTGTCCTGGAGAAGGCAAGAGGCTGAATTGCTTGGTGCCGAGGCCGAAAGGGTATCATATTCGAATTCCTTGGCCTCAGAGCAGAGATGAGTTTGTTTACAGCTTAATTAGGTGGTCAAAATTGATAGCGATTAAGAAAGATAAATTTGTGTTTCCTGGAGGTGGAACACAGTTTATTCATGGGGCAAATGAGTACTTGGATCAGATTTCTCAGATGATTCCTGAAATTGCATTTGGCCGCAAGACCCGAGTAGCGTTAGATGTTGGTTGTGGAGTAGCGAGTTTTGGTGCCTTTTTGATGCAACGGAATGTGACCACTCTGTCAGTGGCGCCAAAAGATGTCCATGAGAACCAGATCCAGTTTGCACTAGAGCGTGGTGTGCCTGCTATGGTGGCAGTATTTGCAACTCACCGCTTGTTGTATCCAAGCCAGGCTTTTGACTTGATCCACTGTTCAAGATGTAGAATTAATTGGACTCGTGATGACGGAATTTGGCTTCTCGAGGTTGACAGGTTGCTGAGAGCAGGAGGATATTTTGTTTGGGCAGCGCAGCCCGTTTATAAACATGAAGAGGCCCTACAAGTACAATGGAAAGGGTTTGTTTATCTATTAACAGAAATGGAGGACCTGACCACACGCATTTGCTGGGAACTTTTAAAGAAGGAAGGGATGATTGCCATATGGAGGAAACCTTTGAACAACAGCTGCTATCTTAGTCGTGATGCCGTAGTGCAGCCTCCATTATGTGATTCCAATGATGATCCAGACAATGTTTGGTATGTTGGTTTGAAGGCATGCATCACTCGGTTACCTGAAAATGGTTATGGAGCAAATGTTTCTTTGTGGCCTGCAAGGCTTCAGGATCCACCAGACAGACTCCAGAGCATACGATTAGATGCCTATATATCTAGAAAAGAGATCTTCACGGCTGAGGCGAAGTACTGGAATGAAATATTAACAGGTTATGTTGGTGCTTACCATTGGAAAGAGTTGAACTTTAGAAACATATTGGACATGAGGGCTGGATATGGAGGGTTTGCAGCAGCATTGCATGAACACGGGCTAGATTGTTGGGTAATGAATGTTGTTCCCATTTCTGGGTTCAACACCTTACCAGTTATTTATGACCGTGGACTTATCGGAGTAATGCACGACTGGTGTGAGCCATTTGACACTTATCCAAGAACATATGACTTATTGCACGCAGCAGGTCTCTTCTCTATCGAGCAAAAGAGGTGTAATATCTCAACCATCATTCTTGAAATGGACCGAATGTTGAGGCCTGGGGGACGCGTTTATATACGTGACTCTGTGTCTGTAATCGGTGAGCTTCACGAACTTGCAAGTGCGGTTGGATGGGTGCCTGCACTACACGATACAGGAGAAGGACCCCATGCAAGCTGGAAGATCTTAATAGGCGACAAGCGTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0016740 GO:0016741 GO:0032259 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

655

Amino Acids

72.92

Weight (kDa)

6.21

Isoelectric Point (pI)

40.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	152 - 653	2.6e-206	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	264 - 358	4.6e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77260
fragaria_vesca	FvH4_2g28020
malus_domestica	MD15G1132900.v1.1
prunus_persica	Prupe.1G488500_v2.0.a1 Prupe.1G488500_v2.0.a1
pyrus_communis	pycom15g11980
rosa_chinensis	RchiOBHm_Chr6g0296881
rosa_laevigata	RLG00000011649
rosa_multiflora	Rmu_co8446841.1_g000001 Rmu_sc0033097.1_g000001 Rmu_sc0038066.1_g000001
rosa_roxburghii	Rroxscaffold_7G00171060
rosa_rugosa	Rorug06G0267200 Rorug06G0267300
rosa_samantha	Rh6AG378000 Rh6BG386000 Rh6CG391400 Rh6DG378700
rosa_wichuraiana	Rw6G033040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1095
AasI	GACNNNNNNGTC	1 cut(s)	853
Acc36I	ACCTGC	1 cut(s)	1733
AccB1I	GGYRCC	5 cut(s)	193, 568, 821, 862, 1894
AccBSI	CCGCTC	1 cut(s)	360
AccII	CGCG	6 cut(s)	14, 23, 224, 293, 329, 1827
AclWI	GGATC	6 cut(s)	741, 883, 973, 1289, 1391, 1404
AcoI	YGGCCR	3 cut(s)	15, 336, 769
AcsI	RAATTY	4 cut(s)	446, 597, 677, 1023
AcuI	CTGAAG	2 cut(s)	368, 1376
AcyI	GRCGYC	2 cut(s)	194, 863
AfaI	GTAC	3 cut(s)	728, 1119, 1475
AfiI	CCNNNNNNNGG	6 cut(s)	545, 695, 1218, 1352, 1631, 1632
AflIII	ACRYGT	1 cut(s)	1825
AgsI	TTSAA	9 cut(s)	37, 310, 527, 990, 1231, 1324, 1528, 1639, 1796
AhdI	GACNNNNNGTC	1 cut(s)	1846
AjnI	CCWGG	5 cut(s)	333, 538, 688, 963, 1816
AjuI	GAANNNNNNNTTGG	2 cut(s)	750, 782
AluBI	AGCT	7 cut(s)	65, 346, 496, 636, 1239, 1864, 1935
AluI	AGCT	7 cut(s)	65, 346, 496, 636, 1239, 1864, 1935
Alw26I	GTCTC	2 cut(s)	231, 1751
AlwI	GGATC	6 cut(s)	741, 883, 973, 1289, 1391, 1404
Ama87I	CYCGRG	2 cut(s)	780, 1034
AoxI	GGCC	9 cut(s)	6, 15, 336, 575, 605, 769, 1107, 1379, 1814
ApeKI	GCWGC	7 cut(s)	1079, 1084, 1239, 1267, 1574, 1577, 1739
ApoI	RAATTY	4 cut(s)	446, 597, 677, 1023
AseI	ATTAAT	1 cut(s)	1002
AspLEI	GCGC	4 cut(s)	196, 293, 865, 1084
AspS9I	GGNCC	5 cut(s)	7, 1108, 1159, 1801, 1922
AsuHPI	GGTGA	6 cut(s)	76, 145, 398, 527, 935, 1871
AsuII	TTCGAA	1 cut(s)	595
AvaI	CYCGRG	2 cut(s)	780, 1034
AvaII	GGWCC	3 cut(s)	1159, 1801, 1922
BamHI	GGATCC	1 cut(s)	1396
BanI	GGYRCC	5 cut(s)	193, 568, 821, 862, 1894
BarI	GAAGNNNNNNTAC	2 cut(s)	1095, 1127
BauI	CACGAG	1 cut(s)	1011
BbsI	GAAGAC	1 cut(s)	44
BbvCI	CCTCAGC	1 cut(s)	1464
BbvI	GCAGC	7 cut(s)	1091, 1096, 1226, 1279, 1586, 1589, 1751
BccI	CCATC	4 cut(s)	262, 368, 1793, 1884
BceAI	ACGGC	5 cut(s)	56, 304, 406, 1244, 1476
BciT130I	CCWGG	5 cut(s)	335, 540, 690, 965, 1818
BciVI	GTATCC	1 cut(s)	966
BclI	TGATCA	1 cut(s)	439
BcoDI	GTCTC	2 cut(s)	231, 1751
BfaI	CTAG	3 cut(s)	902, 1443, 1598
BfoI	RGCGCY	2 cut(s)	197, 866
BfuAI	ACCTGC	1 cut(s)	1733
BfuI	GTATCC	1 cut(s)	966
BglI	GCCNNNNNGGC	3 cut(s)	14, 23, 1387
BglII	AGATCT	3 cut(s)	30, 1452, 1941
BmcAI	AGTACT	2 cut(s)	728, 1475
Bme1390I	CCNGG	5 cut(s)	335, 540, 690, 965, 1818
Bme18I	GGWCC	3 cut(s)	1159, 1801, 1922
BmeRI	GACNNNNNGTC	1 cut(s)	1846
BmeT110I	CYCGRG	2 cut(s)	780, 1034
BmgT120I	GGNCC	5 cut(s)	7, 1108, 1159, 1801, 1922
BmiI	GGNNCC	7 cut(s)	195, 570, 823, 864, 1398, 1896, 1924
BmrFI	CCNGG	5 cut(s)	335, 540, 690, 965, 1818
BmsI	GCATC	5 cut(s)	194, 822, 1246, 1341, 1420
BpiI	GAAGAC	1 cut(s)	44
BpmI	CTGGAG	3 cut(s)	561, 711, 1397
Bpu10I	CCTNAGC	1 cut(s)	1464
Bpu14I	TTCGAA	1 cut(s)	595
BsaAI	YACGTR	1 cut(s)	1838
BsaHI	GRCGYC	2 cut(s)	194, 863
BsaI	GGTCTC	1 cut(s)	1751
BsaJI	CCNNGG	5 cut(s)	21, 572, 602, 1663, 1817
BsaXI	ACNNNNNCTCC	4 cut(s)	370, 400, 1353, 1383
Bsc4I	CCNNNNNNNGG	6 cut(s)	545, 695, 1218, 1352, 1631, 1632
Bse1I	ACTGG	4 cut(s)	892, 1481, 1649, 1694
Bse3DI	GCAATG	2 cut(s)	400, 1580
BseBI	CCWGG	5 cut(s)	335, 540, 690, 965, 1818
BseDI	CCNNGG	5 cut(s)	21, 572, 602, 1663, 1817
BseGI	GGATG	5 cut(s)	273, 379, 487, 1209, 1895
BseLI	CCNNNNNNNGG	6 cut(s)	545, 695, 1218, 1352, 1631, 1632
BseMI	GCAATG	2 cut(s)	400, 1580
BseMII	CTCAG	5 cut(s)	498, 623, 758, 1043, 1455
BseNI	ACTGG	4 cut(s)	892, 1481, 1649, 1694
BseRI	GAGGAG	6 cut(s)	124, 127, 130, 133, 219, 317
BseXI	GCAGC	7 cut(s)	1091, 1096, 1226, 1279, 1586, 1589, 1751
BseYI	CCCAGC	1 cut(s)	1179
BsgI	GTGCAG	2 cut(s)	1286, 1884
Bsh1236I	CGCG	6 cut(s)	14, 23, 224, 293, 329, 1827
BshFI	GGCC	9 cut(s)	8, 17, 338, 577, 607, 771, 1109, 1381, 1816
BshNI	GGYRCC	5 cut(s)	193, 568, 821, 862, 1894
BsiHKCI	CYCGRG	2 cut(s)	780, 1034
BsiSI	CCGG	3 cut(s)	191, 197, 254
BslFI	GGGAC	1 cut(s)	1836
BslI	CCNNNNNNNGG	6 cut(s)	545, 695, 1218, 1352, 1631, 1632
BsmAI	GTCTC	2 cut(s)	231, 1751
BsmBI	CGTCTC	1 cut(s)	231
BsmFI	GGGAC	1 cut(s)	1836
BsmI	GAATGC	1 cut(s)	358
BsnI	GGCC	9 cut(s)	8, 17, 338, 577, 607, 771, 1109, 1381, 1816
Bso31I	GGTCTC	1 cut(s)	1751
BsoBI	CYCGRG	2 cut(s)	780, 1034
Bsp119I	TTCGAA	1 cut(s)	595
Bsp143I	GATC	9 cut(s)	30, 439, 733, 888, 978, 1294, 1396, 1452, 1941
BspANI	GGCC	9 cut(s)	8, 17, 338, 577, 607, 771, 1109, 1381, 1816
BspCNI	CTCAG	5 cut(s)	499, 622, 757, 1044, 1456
BspFNI	CGCG	6 cut(s)	14, 23, 224, 293, 329, 1827
BspLI	GGNNCC	7 cut(s)	195, 570, 823, 864, 1398, 1896, 1924
BspMI	ACCTGC	1 cut(s)	1733
BspPI	GGATC	6 cut(s)	741, 883, 973, 1289, 1391, 1404
BspT104I	TTCGAA	1 cut(s)	595
BspT107I	GGYRCC	5 cut(s)	193, 568, 821, 862, 1894
BspTNI	GGTCTC	1 cut(s)	1751
BsrBI	CCGCTC	1 cut(s)	360
BsrDI	GCAATG	2 cut(s)	400, 1580
BsrI	ACTGG	4 cut(s)	892, 1481, 1649, 1694
BssECI	CCNNGG	5 cut(s)	21, 572, 602, 1663, 1817
BssMI	GATC	9 cut(s)	30, 439, 733, 888, 978, 1294, 1396, 1452, 1941
BssNI	GRCGYC	2 cut(s)	194, 863
BssSI	CACGAG	1 cut(s)	1011
BssT1I	CCWWGG	1 cut(s)	602
Bst2BI	CACGAG	1 cut(s)	1011
Bst2UI	CCWGG	5 cut(s)	335, 540, 690, 965, 1818
Bst4CI	ACNGT	5 cut(s)	151, 465, 705, 986, 1664
Bst6I	CTCTTC	3 cut(s)	95, 1098, 1754
BstACI	GRCGYC	2 cut(s)	194, 863
BstAPI	GCANNNNNTGC	1 cut(s)	935
BstBAI	YACGTR	1 cut(s)	1838
BstBI	TTCGAA	1 cut(s)	595
BstC8I	GCNNGC	8 cut(s)	331, 358, 918, 1330, 1383, 1737, 1899, 1933
BstDEI	CTNAG	6 cut(s)	507, 609, 744, 1052, 1247, 1464
BstDSI	CCRYGG	2 cut(s)	21, 1663
BstEII	GGTNACC	1 cut(s)	1341
BstENI	CCTNNNNNAGG	1 cut(s)	543
BstF5I	GGATG	5 cut(s)	273, 379, 487, 1209, 1895
BstFNI	CGCG	6 cut(s)	14, 23, 224, 293, 329, 1827
BstH2I	RGCGCY	2 cut(s)	197, 866
BstHHI	GCGC	4 cut(s)	196, 293, 865, 1084
BstKTI	GATC	9 cut(s)	33, 442, 736, 891, 981, 1297, 1399, 1455, 1944
BstMAI	GTCTC	2 cut(s)	231, 1751
BstMBI	GATC	9 cut(s)	30, 439, 733, 888, 978, 1294, 1396, 1452, 1941
BstNI	CCWGG	5 cut(s)	335, 540, 690, 965, 1818
BstNSI	RCATGY	1 cut(s)	1332
BstPI	GGTNACC	1 cut(s)	1341
BstSCI	CCNGG	5 cut(s)	333, 538, 688, 963, 1816
BstUI	CGCG	6 cut(s)	14, 23, 224, 293, 329, 1827
BstV1I	GCAGC	7 cut(s)	1091, 1096, 1226, 1279, 1586, 1589, 1751
BstV2I	GAAGAC	1 cut(s)	44
BstX2I	RGATCY	5 cut(s)	30, 888, 1396, 1452, 1941
BstYI	RGATCY	5 cut(s)	30, 888, 1396, 1452, 1941
BsuI	GTATCC	1 cut(s)	966
BsuRI	GGCC	9 cut(s)	8, 17, 338, 577, 607, 771, 1109, 1381, 1816
BtgI	CCRYGG	2 cut(s)	21, 1663
BtgZI	GCGATG	1 cut(s)	308
BtsCI	GGATG	5 cut(s)	273, 379, 487, 1209, 1895
BtsIMutI	CAGTG	3 cut(s)	450, 864, 982
BveI	ACCTGC	1 cut(s)	1733
Cac8I	GCNNGC	8 cut(s)	331, 358, 918, 1330, 1383, 1737, 1899, 1933
CfoI	GCGC	4 cut(s)	196, 293, 865, 1084
Cfr13I	GGNCC	5 cut(s)	7, 1108, 1159, 1801, 1922
Cfr42I	CCGCGG	1 cut(s)	24
CseI	GACGC	3 cut(s)	213, 335, 1833
Csp6I	GTAC	3 cut(s)	727, 1118, 1474
CspCI	CAANNNNNGTGG	2 cut(s)	382, 417
CviAII	CATG	7 cut(s)	713, 878, 1100, 1329, 1549, 1586, 1928
CviQI	GTAC	3 cut(s)	727, 1118, 1474
DdeI	CTNAG	6 cut(s)	507, 609, 744, 1052, 1247, 1464
DinI	GGCGCC	2 cut(s)	195, 864
DpnI	GATC	9 cut(s)	32, 441, 735, 890, 980, 1296, 1398, 1454, 1943
DpnII	GATC	9 cut(s)	30, 439, 733, 888, 978, 1294, 1396, 1452, 1941
DraI	TTTAAA	1 cut(s)	1191
DrdI	GACNNNNNNGTC	1 cut(s)	853
DriI	GACNNNNNGTC	1 cut(s)	1846
DseDI	GACNNNNNNGTC	1 cut(s)	853
EaeI	YGGCCR	3 cut(s)	15, 336, 769
Eam1104I	CTCTTC	3 cut(s)	95, 1098, 1754
Eam1105I	GACNNNNNGTC	1 cut(s)	1846
EarI	CTCTTC	3 cut(s)	95, 1098, 1754
EciI	GGCGGA	3 cut(s)	41, 157, 231
Eco130I	CCWWGG	1 cut(s)	602
Eco147I	AGGCCT	1 cut(s)	1816
Eco31I	GGTCTC	1 cut(s)	1751
Eco47I	GGWCC	3 cut(s)	1159, 1801, 1922
Eco57I	CTGAAG	2 cut(s)	368, 1376
Eco88I	CYCGRG	2 cut(s)	780, 1034
Eco91I	GGTNACC	1 cut(s)	1341
EcoNI	CCTNNNNNAGG	1 cut(s)	543
EcoO109I	RGGNCCY	4 cut(s)	7, 1108, 1159, 1922
EcoO65I	GGTNACC	1 cut(s)	1341
EcoRI	GAATTC	1 cut(s)	597
EcoRII	CCWGG	5 cut(s)	333, 538, 688, 963, 1816
EcoT14I	CCWWGG	1 cut(s)	602
EcoT22I	ATGCAT	1 cut(s)	1334
EgeI	GGCGCC	2 cut(s)	195, 864
EheI	GGCGCC	2 cut(s)	195, 864
ErhI	CCWWGG	1 cut(s)	602
Esp3I	CGTCTC	1 cut(s)	231
FaeI	CATG	7 cut(s)	716, 881, 1103, 1332, 1552, 1589, 1931
FalI	AAGNNNNNCTT	2 cut(s)	952, 984
FaqI	GGGAC	1 cut(s)	1836
FatI	CATG	7 cut(s)	712, 877, 1099, 1328, 1548, 1585, 1927
FauI	CCCGC	1 cut(s)	229
FauNDI	CATATG	2 cut(s)	1214, 1723
FbaI	TGATCA	1 cut(s)	439
FokI	GGATG	5 cut(s)	280, 386, 494, 1216, 1902
FspBI	CTAG	3 cut(s)	902, 1443, 1598
GlaI	GCGC	4 cut(s)	195, 292, 864, 1083
GsaI	CCCAGC	1 cut(s)	1183
GsuI	CTGGAG	3 cut(s)	561, 711, 1397
HaeII	RGCGCY	2 cut(s)	197, 866
HaeIII	GGCC	9 cut(s)	8, 17, 338, 577, 607, 771, 1109, 1381, 1816
HapII	CCGG	3 cut(s)	191, 197, 254
HgaI	GACGC	3 cut(s)	213, 335, 1833
HhaI	GCGC	4 cut(s)	196, 293, 865, 1084
Hin1I	GRCGYC	2 cut(s)	194, 863
Hin1II	CATG	7 cut(s)	716, 881, 1103, 1332, 1552, 1589, 1931
Hin6I	GCGC	4 cut(s)	194, 291, 863, 1082
HinP1I	GCGC	4 cut(s)	194, 291, 863, 1082
HincII	GTYRAC	1 cut(s)	1042
HindII	GTYRAC	1 cut(s)	1042
HinfI	GANTC	6 cut(s)	200, 751, 1009, 1283, 1410, 1841
HpaII	CCGG	3 cut(s)	191, 197, 254
HphI	GGTGA	6 cut(s)	76, 145, 398, 527, 935, 1871
Hpy166II	GTNNAC	4 cut(s)	280, 631, 1042, 1667
Hpy188I	TCNGA	6 cut(s)	301, 444, 612, 738, 747, 1676
Hpy8I	GTNNAC	4 cut(s)	280, 631, 1042, 1667
Hpy99I	CGWCG	3 cut(s)	49, 77, 329
HpyAV	CCTTC	7 cut(s)	139, 364, 539, 1189, 1193, 1318, 1913
HpyCH4III	ACNGT	5 cut(s)	151, 465, 705, 986, 1664
HpyCH4IV	ACGT	2 cut(s)	47, 1837
HpyF3I	CTNAG	6 cut(s)	507, 609, 744, 1052, 1247, 1464
HpySE526I	ACGT	2 cut(s)	47, 1837
Hsp92I	GRCGYC	2 cut(s)	194, 863
Hsp92II	CATG	7 cut(s)	716, 881, 1103, 1332, 1552, 1589, 1931
HspAI	GCGC	4 cut(s)	194, 291, 863, 1082
KasI	GGCGCC	2 cut(s)	193, 862
Ksp22I	TGATCA	1 cut(s)	439
KspI	CCGCGG	1 cut(s)	24
Kzo9I	GATC	9 cut(s)	30, 439, 733, 888, 978, 1294, 1396, 1452, 1941
LmnI	GCTCC	1 cut(s)	1361
Lsp1109I	GCAGC	7 cut(s)	1091, 1096, 1226, 1279, 1586, 1589, 1751
LweI	GCATC	5 cut(s)	194, 822, 1246, 1341, 1420
MaeI	CTAG	3 cut(s)	902, 1443, 1598
MaeII	ACGT	2 cut(s)	47, 1837
MaeIII	GTNAC	5 cut(s)	151, 386, 844, 1341, 1838
MalI	GATC	9 cut(s)	32, 441, 735, 890, 980, 1296, 1398, 1454, 1943
MbiI	CCGCTC	1 cut(s)	360
MboI	GATC	9 cut(s)	30, 439, 733, 888, 978, 1294, 1396, 1452, 1941
MboII	GAAGA	7 cut(s)	49, 82, 361, 1115, 1447, 1741, 1951
MflI	RGATCY	5 cut(s)	30, 888, 1396, 1452, 1941
MluI	ACGCGT	1 cut(s)	1825
Mly113I	GGCGCC	2 cut(s)	194, 863
MlyI	GAGTC	3 cut(s)	1003, 1404, 1835
MmeI	TCCRAC	2 cut(s)	279, 1867
Mph1103I	ATGCAT	1 cut(s)	1334
MseI	TTAA	9 cut(s)	414, 489, 638, 666, 1002, 1145, 1190, 1490, 1946
MspA1I	CMGCKG	2 cut(s)	23, 1239
MspI	CCGG	3 cut(s)	191, 197, 254
MspR9I	CCNGG	5 cut(s)	335, 540, 690, 965, 1818
Mva1269I	GAATGC	1 cut(s)	358
MvaI	CCWGG	5 cut(s)	335, 540, 690, 965, 1818
MvnI	CGCG	6 cut(s)	14, 23, 224, 293, 329, 1827
NarI	GGCGCC	2 cut(s)	194, 863
NdeI	CATATG	2 cut(s)	1214, 1723
NdeII	GATC	9 cut(s)	30, 439, 733, 888, 978, 1294, 1396, 1452, 1941
NlaIII	CATG	7 cut(s)	716, 881, 1103, 1332, 1552, 1589, 1931
NlaIV	GGNNCC	7 cut(s)	195, 570, 823, 864, 1398, 1896, 1924
NmeAIII	GCCGAG	1 cut(s)	597
NmuCI	GTSAC	4 cut(s)	151, 386, 844, 1838
NsiI	ATGCAT	1 cut(s)	1334
NspI	RCATGY	1 cut(s)	1332
NspV	TTCGAA	1 cut(s)	595
PaeI	GCATGC	1 cut(s)	1332
PaeR7I	CTCGAG	1 cut(s)	1034
PceI	AGGCCT	1 cut(s)	1816
PcsI	WCGNNNNNNNCGW	2 cut(s)	321, 1466
PctI	GAATGC	1 cut(s)	358
PfeI	GAWTC	3 cut(s)	200, 751, 1283
PfoI	TCCNGGA	2 cut(s)	538, 688
PleI	GAGTC	3 cut(s)	1003, 1404, 1835
PluTI	GGCGCC	2 cut(s)	197, 866
PpsI	GAGTC	3 cut(s)	1003, 1404, 1835
Ppu21I	YACGTR	1 cut(s)	1838
PpuMI	RGGWCCY	2 cut(s)	1159, 1922
PshBI	ATTAAT	1 cut(s)	1002
PsiI	TTATAA	1 cut(s)	1095
Psp5II	RGGWCCY	2 cut(s)	1159, 1922
Psp6I	CCWGG	5 cut(s)	333, 538, 688, 963, 1816
PspEI	GGTNACC	1 cut(s)	1341
PspFI	CCCAGC	1 cut(s)	1179
PspGI	CCWGG	5 cut(s)	333, 538, 688, 963, 1816
PspN4I	GGNNCC	7 cut(s)	195, 570, 823, 864, 1398, 1896, 1924
PspPI	GGNCC	5 cut(s)	7, 1108, 1159, 1801, 1922
PspPPI	RGGWCCY	2 cut(s)	1159, 1922
PsuI	RGATCY	5 cut(s)	30, 888, 1396, 1452, 1941
PvuII	CAGCTG	1 cut(s)	1239
RsaI	GTAC	3 cut(s)	728, 1119, 1475
RsaNI	GTAC	3 cut(s)	727, 1118, 1474
SacII	CCGCGG	1 cut(s)	24
SaqAI	TTAA	9 cut(s)	414, 489, 638, 666, 1002, 1145, 1190, 1490, 1946
Sau3AI	GATC	9 cut(s)	30, 439, 733, 888, 978, 1294, 1396, 1452, 1941
Sau96I	GGNCC	5 cut(s)	7, 1108, 1159, 1801, 1922
ScaI	AGTACT	2 cut(s)	728, 1475
SchI	GAGTC	3 cut(s)	1003, 1404, 1835
ScrFI	CCNGG	5 cut(s)	335, 540, 690, 965, 1818
SfaNI	GCATC	5 cut(s)	194, 822, 1246, 1341, 1420
SfiI	GGCCNNNNNGGCC	1 cut(s)	14
SfoI	GGCGCC	2 cut(s)	195, 864
Sfr274I	CTCGAG	1 cut(s)	1034
Sfr303I	CCGCGG	1 cut(s)	24
SfuI	TTCGAA	1 cut(s)	595
SgrBI	CCGCGG	1 cut(s)	24
SinI	GGWCC	3 cut(s)	1159, 1801, 1922
SlaI	CTCGAG	1 cut(s)	1034
SmlI	CTYRAG	1 cut(s)	1034
SmoI	CTYRAG	1 cut(s)	1034
SphI	GCATGC	1 cut(s)	1332
SseBI	AGGCCT	1 cut(s)	1816
SspDI	GGCGCC	2 cut(s)	193, 862
SspI	AATATT	1 cut(s)	1488
SspMI	CTAG	3 cut(s)	902, 1443, 1598
StuI	AGGCCT	1 cut(s)	1816
StyD4I	CCNGG	5 cut(s)	333, 538, 688, 963, 1816
StyI	CCWWGG	1 cut(s)	602
TaaI	ACNGT	5 cut(s)	151, 465, 705, 986, 1664
TaiI	ACGT	2 cut(s)	50, 1840
TaqI	TCGA	5 cut(s)	324, 503, 595, 1035, 1758
TaqII	GACCGA	1 cut(s)	1818
TatI	WGTACW	3 cut(s)	726, 1117, 1473
TauI	GCSGC	3 cut(s)	17, 26, 774
TfiI	GAWTC	3 cut(s)	200, 751, 1283
Tru1I	TTAA	9 cut(s)	414, 489, 638, 666, 1002, 1145, 1190, 1490, 1946
Tru9I	TTAA	9 cut(s)	414, 489, 638, 666, 1002, 1145, 1190, 1490, 1946
TscAI	CASTG	3 cut(s)	457, 864, 989
TseFI	GTSAC	4 cut(s)	151, 386, 844, 1838
TseI	GCWGC	7 cut(s)	1079, 1084, 1239, 1267, 1574, 1577, 1739
Tsp45I	GTSAC	4 cut(s)	151, 386, 844, 1838
TspDTI	ATGAA	8 cut(s)	17, 40, 108, 701, 1116, 1497, 1602, 1628
TspGWI	ACGGA	2 cut(s)	853, 1035
TspRI	CASTG	3 cut(s)	457, 864, 989
VpaK11BI	GGWCC	3 cut(s)	1159, 1801, 1922
VspI	ATTAAT	1 cut(s)	1002
XagI	CCTNNNNNAGG	1 cut(s)	543
XapI	RAATTY	4 cut(s)	446, 597, 677, 1023
XbaI	TCTAGA	1 cut(s)	1442
XceI	RCATGY	1 cut(s)	1332
XcmI	CCANNNNNNNNNTGG	2 cut(s)	856, 1305
XhoI	CTCGAG	1 cut(s)	1034
XspI	CTAG	3 cut(s)	902, 1443, 1598
ZrmI	AGTACT	2 cut(s)	728, 1475
Zsp2I	ATGCAT	1 cut(s)	1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.