No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD12G1114600.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0441031 RchiOBHm_Chr6g0303141 RchiOBHm_Chr7g0223521 RchiOBHm_Chr7g0238701 |
| rosa_laevigata | RLG00000002450 RLG00000009635 RLG00000019449 RLG00000028910 RLG00000034962 |
| rosa_roxburghii | Rroxscaffold_1G00027990 |
| rosa_rugosa | Rorug01G0173000 |
| rosa_samantha | Rh5DG055800 Rh7DG462500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 237 |
| AcuI | CTGAAG | 1 cut(s) | 102 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 169 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 156, 188 |
| Alw26I | GTCTC | 2 cut(s) | 127, 185 |
| ApeKI | GCWGC | 2 cut(s) | 12, 197 |
| AspS9I | GGNCC | 1 cut(s) | 160 |
| AsuC2I | CCSGG | 1 cut(s) | 212 |
| AsuHPI | GGTGA | 1 cut(s) | 254 |
| AvaII | GGWCC | 1 cut(s) | 160 |
| BaeGI | GKGCMC | 1 cut(s) | 217 |
| BbvI | GCAGC | 2 cut(s) | 24, 184 |
| BccI | CCATC | 1 cut(s) | 223 |
| BcnI | CCSGG | 1 cut(s) | 212 |
| BcoDI | GTCTC | 2 cut(s) | 127, 185 |
| BisI | GCNGC | 2 cut(s) | 13, 198 |
| BlsI | GCNGC | 2 cut(s) | 14, 199 |
| Bme1390I | CCNGG | 1 cut(s) | 212 |
| Bme18I | GGWCC | 1 cut(s) | 160 |
| BmgT120I | GGNCC | 1 cut(s) | 160 |
| BmrFI | CCNGG | 1 cut(s) | 212 |
| BpuMI | CCSGG | 1 cut(s) | 212 |
| BsaWI | WCCGGW | 1 cut(s) | 50 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 169 |
| Bse1I | ACTGG | 1 cut(s) | 65 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BseMII | CTCAG | 1 cut(s) | 180 |
| BseNI | ACTGG | 1 cut(s) | 65 |
| BseRI | GAGGAG | 2 cut(s) | 20, 78 |
| BseSI | GKGCMC | 1 cut(s) | 217 |
| BseXI | GCAGC | 2 cut(s) | 24, 184 |
| BsiSI | CCGG | 2 cut(s) | 51, 211 |
| BslFI | GGGAC | 2 cut(s) | 78, 160 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BsmAI | GTCTC | 2 cut(s) | 127, 185 |
| BsmFI | GGGAC | 2 cut(s) | 78, 160 |
| BsmI | GAATGC | 1 cut(s) | 252 |
| Bsp1286I | GDGCHC | 1 cut(s) | 217 |
| BspCNI | CTCAG | 1 cut(s) | 181 |
| BspHI | TCATGA | 1 cut(s) | 205 |
| BsrI | ACTGG | 1 cut(s) | 65 |
| BstDEI | CTNAG | 1 cut(s) | 189 |
| BstMAI | GTCTC | 2 cut(s) | 127, 185 |
| BstSCI | CCNGG | 1 cut(s) | 210 |
| BstSLI | GKGCMC | 1 cut(s) | 217 |
| BstV1I | GCAGC | 2 cut(s) | 24, 184 |
| CciI | TCATGA | 1 cut(s) | 205 |
| Cfr13I | GGNCC | 1 cut(s) | 160 |
| CseI | GACGC | 1 cut(s) | 53 |
| CviAII | CATG | 3 cut(s) | 9, 180, 206 |
| CviJI | RGCY | 3 cut(s) | 15, 64, 266 |
| CviKI_1 | RGCY | 3 cut(s) | 15, 64, 266 |
| DdeI | CTNAG | 1 cut(s) | 189 |
| Eco47I | GGWCC | 1 cut(s) | 160 |
| Eco57I | CTGAAG | 1 cut(s) | 102 |
| EcoT22I | ATGCAT | 1 cut(s) | 254 |
| FaeI | CATG | 3 cut(s) | 12, 183, 209 |
| FaiI | YATR | 7 cut(s) | 10, 73, 181, 207, 219, 237, 250 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 53, 85 |
| FaqI | GGGAC | 2 cut(s) | 78, 160 |
| FatI | CATG | 3 cut(s) | 8, 179, 205 |
| Fnu4HI | GCNGC | 2 cut(s) | 13, 198 |
| Fsp4HI | GCNGC | 2 cut(s) | 13, 198 |
| GluI | GCNGC | 2 cut(s) | 13, 198 |
| HapII | CCGG | 2 cut(s) | 51, 211 |
| HgaI | GACGC | 1 cut(s) | 53 |
| Hin1II | CATG | 3 cut(s) | 12, 183, 209 |
| HinfI | GANTC | 3 cut(s) | 21, 54, 148 |
| HpaII | CCGG | 2 cut(s) | 51, 211 |
| HphI | GGTGA | 1 cut(s) | 254 |
| Hpy188I | TCNGA | 1 cut(s) | 190 |
| Hpy188III | TCNNGA | 2 cut(s) | 58, 206 |
| HpyCH4V | TGCA | 2 cut(s) | 12, 252 |
| HpyF3I | CTNAG | 1 cut(s) | 189 |
| Hsp92II | CATG | 3 cut(s) | 12, 183, 209 |
| LpnPI | CCDG | 6 cut(s) | 64, 78, 129, 143, 214, 224 |
| Lsp1109I | GCAGC | 2 cut(s) | 24, 184 |
| MaeIII | GTNAC | 1 cut(s) | 34 |
| MhlI | GDGCHC | 1 cut(s) | 217 |
| MluCI | AATT | 1 cut(s) | 164 |
| MlyI | GAGTC | 2 cut(s) | 48, 142 |
| MnlI | CCTC | 6 cut(s) | 38, 41, 99, 106, 110, 163 |
| Mph1103I | ATGCAT | 1 cut(s) | 254 |
| MspI | CCGG | 2 cut(s) | 51, 211 |
| MspR9I | CCNGG | 1 cut(s) | 212 |
| Mva1269I | GAATGC | 1 cut(s) | 252 |
| NciI | CCSGG | 1 cut(s) | 212 |
| NlaIII | CATG | 3 cut(s) | 12, 183, 209 |
| NsiI | ATGCAT | 1 cut(s) | 254 |
| PagI | TCATGA | 1 cut(s) | 205 |
| PctI | GAATGC | 1 cut(s) | 252 |
| PfeI | GAWTC | 1 cut(s) | 21 |
| PkrI | GCNGC | 2 cut(s) | 14, 199 |
| PleI | GAGTC | 2 cut(s) | 48, 142 |
| PpsI | GAGTC | 2 cut(s) | 48, 142 |
| PsiI | TTATAA | 1 cut(s) | 237 |
| PspPI | GGNCC | 1 cut(s) | 160 |
| SatI | GCNGC | 2 cut(s) | 13, 198 |
| Sau96I | GGNCC | 1 cut(s) | 160 |
| SchI | GAGTC | 2 cut(s) | 48, 142 |
| ScrFI | CCNGG | 1 cut(s) | 212 |
| SduI | GDGCHC | 1 cut(s) | 217 |
| SetI | ASST | 2 cut(s) | 174, 244 |
| SinI | GGWCC | 1 cut(s) | 160 |
| Sse9I | AATT | 1 cut(s) | 164 |
| StyD4I | CCNGG | 1 cut(s) | 210 |
| TaqI | TCGA | 2 cut(s) | 59, 129 |
| TasI | AATT | 1 cut(s) | 164 |
| TfiI | GAWTC | 1 cut(s) | 21 |
| TseI | GCWGC | 2 cut(s) | 12, 197 |
| TspDTI | ATGAA | 2 cut(s) | 164, 168 |
| VpaK11BI | GGWCC | 1 cut(s) | 160 |
| Zsp2I | ATGCAT | 1 cut(s) | 254 |