RLG00000034962

Belongs to the 14-3-3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0016942
Physical Location & Seq
Forward (+)
57704174 .. 57704591
418 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034962

Sequence Viewer

Length: 309 bp
ATGGCGTCCTCCATCCCCGATAACCTAACCAAAGACCAGCACGTCTACTTGGCCAAGCTCACCGAGCAGGTGGAGCGCTACGAGGAGATGAGTCCACCACGGCGTCGGAGCTCACAGTCGAGAAGCGCATCGAACAAAAGGAGGAGGGCTGCAAGAACGAGGAGGACGTGGCGCTCGTCAAGAAGTACAGATCCAAGGTCGAGGCCGAGCTCTCTGAGCTTCAGAGGAGTAAATTCTTCAGCTGATTTGTTGAGAATAAGTGAAGATGTGGCGGGGGGGGTGGTGGAGCTCCGGCGGGGTCGACGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04011 ko04110 ko04114 ko04151 ko04390 ko04391 ko04722 ko05169 ko05203 map04011 map04110 map04114 map04151 map04390 map04391 map04722 map05169 map05203
Pfam Domains
Protein Families
14-3-3

Protein Analysis

103

Amino Acids

11.72

Weight (kDa)

11.71

Isoelectric Point (pI)

118.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 58
AasI GACNNNNNNGTC 1 cut(s) 41
Acc36I ACCTGC 1 cut(s) 58
AccI GTMKAC 2 cut(s) 45, 301
AciI CCGC 2 cut(s) 272, 295
AclWI GGATC 1 cut(s) 185
AcoI YGGCCR 1 cut(s) 51
AcsI RAATTY 1 cut(s) 232
AcuI CTGAAG 2 cut(s) 205, 222
AcyI GRCGYC 2 cut(s) 5, 103
AfaI GTAC 1 cut(s) 187
AfeI AGCGCT 1 cut(s) 77
AjiI CACGTC 2 cut(s) 43, 168
AluBI AGCT 6 cut(s) 58, 111, 210, 219, 242, 289
AluI AGCT 6 cut(s) 58, 111, 210, 219, 242, 289
Alw21I GWGCWC 3 cut(s) 113, 212, 291
AlwI GGATC 1 cut(s) 185
Aor51HI AGCGCT 1 cut(s) 77
AoxI GGCC 2 cut(s) 51, 203
ApeKI GCWGC 1 cut(s) 149
ApoI RAATTY 1 cut(s) 232
AspLEI GCGC 3 cut(s) 78, 128, 174
AsuHPI GGTGA 1 cut(s) 52
BalI TGGCCA 1 cut(s) 53
BanII GRGCYC 3 cut(s) 113, 212, 291
Bbv12I GWGCWC 3 cut(s) 113, 212, 291
BbvI GCAGC 1 cut(s) 136
BccI CCATC 1 cut(s) 20
BceAI ACGGC 1 cut(s) 116
BfoI RGCGCY 2 cut(s) 79, 175
BfuAI ACCTGC 1 cut(s) 58
BisI GCNGC 1 cut(s) 150
BlsI GCNGC 1 cut(s) 151
BmgBI CACGTC 2 cut(s) 43, 168
BmsI GCATC 1 cut(s) 137
BsaHI GRCGYC 2 cut(s) 5, 103
BsaJI CCNNGG 2 cut(s) 98, 194
BseDI CCNNGG 2 cut(s) 98, 194
BseGI GGATG 1 cut(s) 12
BseMII CTCAG 1 cut(s) 206
BseRI GAGGAG 4 cut(s) 98, 157, 175, 240
BseXI GCAGC 1 cut(s) 136
BshFI GGCC 2 cut(s) 53, 205
BsiHKAI GWGCWC 3 cut(s) 113, 212, 291
BsiSI CCGG 1 cut(s) 292
BsnI GGCC 2 cut(s) 53, 205
Bsp1286I GDGCHC 3 cut(s) 113, 212, 291
Bsp143I GATC 1 cut(s) 190
BspACI CCGC 2 cut(s) 272, 295
BspANI GGCC 2 cut(s) 53, 205
BspCNI CTCAG 1 cut(s) 207
BspMI ACCTGC 1 cut(s) 58
BspPI GGATC 1 cut(s) 185
BssECI CCNNGG 2 cut(s) 98, 194
BssMI GATC 1 cut(s) 190
BssNI GRCGYC 2 cut(s) 5, 103
BssT1I CCWWGG 1 cut(s) 194
Bst4CI ACNGT 2 cut(s) 117, 306
BstACI GRCGYC 2 cut(s) 5, 103
BstDEI CTNAG 1 cut(s) 215
BstDSI CCRYGG 1 cut(s) 98
BstF5I GGATG 1 cut(s) 12
BstH2I RGCGCY 2 cut(s) 79, 175
BstHHI GCGC 3 cut(s) 78, 128, 174
BstKTI GATC 1 cut(s) 193
BstMBI GATC 1 cut(s) 190
BstMWI GCNNNNNNNGC 3 cut(s) 64, 73, 216
BstV1I GCAGC 1 cut(s) 136
BstX2I RGATCY 1 cut(s) 190
BstYI RGATCY 1 cut(s) 190
BsuRI GGCC 2 cut(s) 53, 205
BtgI CCRYGG 1 cut(s) 98
BtrI CACGTC 2 cut(s) 43, 168
BtsCI GGATG 1 cut(s) 12
BveI ACCTGC 1 cut(s) 58
CfoI GCGC 3 cut(s) 78, 128, 174
CseI GACGC 1 cut(s) 92
Csp6I GTAC 1 cut(s) 186
CviJI RGCY 9 cut(s) 53, 58, 111, 149, 205, 210, 219, 242, 289
CviKI_1 RGCY 9 cut(s) 53, 58, 111, 149, 205, 210, 219, 242, 289
CviQI GTAC 1 cut(s) 186
DdeI CTNAG 1 cut(s) 215
DpnI GATC 1 cut(s) 192
DpnII GATC 1 cut(s) 190
DrdI GACNNNNNNGTC 1 cut(s) 41
DseDI GACNNNNNNGTC 1 cut(s) 41
EaeI YGGCCR 1 cut(s) 51
Ecl136II GAGCTC 3 cut(s) 111, 210, 289
Eco130I CCWWGG 1 cut(s) 194
Eco24I GRGCYC 3 cut(s) 113, 212, 291
Eco47III AGCGCT 1 cut(s) 77
Eco53kI GAGCTC 3 cut(s) 111, 210, 289
Eco57I CTGAAG 2 cut(s) 205, 222
EcoICRI GAGCTC 3 cut(s) 111, 210, 289
EcoT14I CCWWGG 1 cut(s) 194
EcoT38I GRGCYC 3 cut(s) 113, 212, 291
ErhI CCWWGG 1 cut(s) 194
FauI CCCGC 2 cut(s) 265, 288
FblI GTMKAC 2 cut(s) 45, 301
Fnu4HI GCNGC 1 cut(s) 150
FriOI GRGCYC 3 cut(s) 113, 212, 291
Fsp4HI GCNGC 1 cut(s) 150
GlaI GCGC 3 cut(s) 77, 127, 173
GluI GCNGC 1 cut(s) 150
HaeII RGCGCY 2 cut(s) 79, 175
HaeIII GGCC 2 cut(s) 53, 205
HapII CCGG 1 cut(s) 292
HgaI GACGC 1 cut(s) 92
HhaI GCGC 3 cut(s) 78, 128, 174
Hin1I GRCGYC 2 cut(s) 5, 103
Hin6I GCGC 3 cut(s) 76, 126, 172
HinP1I GCGC 3 cut(s) 76, 126, 172
HincII GTYRAC 1 cut(s) 302
HindII GTYRAC 1 cut(s) 302
HinfI GANTC 1 cut(s) 91
HpaII CCGG 1 cut(s) 292
HphI GGTGA 1 cut(s) 52
Hpy166II GTNNAC 3 cut(s) 46, 95, 302
Hpy188I TCNGA 3 cut(s) 108, 216, 224
Hpy188III TCNNGA 2 cut(s) 120, 180
Hpy8I GTNNAC 3 cut(s) 46, 95, 302
Hpy99I CGWCG 2 cut(s) 108, 306
HpyCH4III ACNGT 2 cut(s) 117, 306
HpyCH4IV ACGT 2 cut(s) 42, 167
HpyCH4V TGCA 1 cut(s) 152
HpyF10VI GCNNNNNNNGC 3 cut(s) 64, 73, 216
HpyF3I CTNAG 1 cut(s) 215
HpySE526I ACGT 2 cut(s) 42, 167
Hsp92I GRCGYC 2 cut(s) 5, 103
HspAI GCGC 3 cut(s) 76, 126, 172
Kzo9I GATC 1 cut(s) 190
LmnI GCTCC 4 cut(s) 73, 108, 286, 294
LpnPI CCDG 3 cut(s) 50, 53, 305
Lsp1109I GCAGC 1 cut(s) 136
LweI GCATC 1 cut(s) 137
MaeII ACGT 2 cut(s) 42, 167
MalI GATC 1 cut(s) 192
MboI GATC 1 cut(s) 190
MboII GAAGA 2 cut(s) 228, 275
MflI RGATCY 1 cut(s) 190
MhlI GDGCHC 3 cut(s) 113, 212, 291
MlsI TGGCCA 1 cut(s) 53
MluCI AATT 1 cut(s) 232
MluNI TGGCCA 1 cut(s) 53
MlyI GAGTC 1 cut(s) 100
MmeI TCCRAC 1 cut(s) 86
MnlI CCTC 8 cut(s) 19, 76, 135, 138, 153, 156, 195, 218
Mox20I TGGCCA 1 cut(s) 53
MscI TGGCCA 1 cut(s) 53
Msp20I TGGCCA 1 cut(s) 53
MspA1I CMGCKG 1 cut(s) 242
MspI CCGG 1 cut(s) 292
MwoI GCNNNNNNNGC 3 cut(s) 64, 73, 216
NdeII GATC 1 cut(s) 190
NmeAIII GCCGAG 1 cut(s) 231
PaqCI CACCTGC 1 cut(s) 58
PcsI WCGNNNNNNNCGW 2 cut(s) 164, 173
PkrI GCNGC 1 cut(s) 151
PleI GAGTC 1 cut(s) 99
PpsI GAGTC 1 cut(s) 99
Psp124BI GAGCTC 3 cut(s) 113, 212, 291
PsuI RGATCY 1 cut(s) 190
PvuII CAGCTG 1 cut(s) 242
RsaI GTAC 1 cut(s) 187
RsaNI GTAC 1 cut(s) 186
SacI GAGCTC 3 cut(s) 113, 212, 291
SalI GTCGAC 1 cut(s) 300
SatI GCNGC 1 cut(s) 150
Sau3AI GATC 1 cut(s) 190
SchI GAGTC 1 cut(s) 100
SduI GDGCHC 3 cut(s) 113, 212, 291
SfaNI GCATC 1 cut(s) 137
Sse9I AATT 1 cut(s) 232
SsiI CCGC 2 cut(s) 272, 295
SstI GAGCTC 3 cut(s) 113, 212, 291
StyI CCWWGG 1 cut(s) 194
TaaI ACNGT 2 cut(s) 117, 306
TaiI ACGT 2 cut(s) 45, 170
TaqI TCGA 4 cut(s) 119, 131, 200, 301
TasI AATT 1 cut(s) 232
TatI WGTACW 1 cut(s) 185
TseI GCWGC 1 cut(s) 149
XapI RAATTY 1 cut(s) 232
XmiI GTMKAC 2 cut(s) 45, 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.