RLG00000002765

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0011373
Physical Location & Seq
Reverse (-)
39451564 .. 39459212
7649 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002765

Sequence Viewer

Length: 1917 bp
ATGGCAAACTCCATACCGGACGTGTCAAAACGTAGAAGATTGAGTCAAAACGACAACAACAACCACCACCAGAACCAGCTGCAGCAGCAGCAGCCCCTCCTGCCCGGACTCCCGGACCATATAGCCCAGGCCTGTCTTTCTCTAGTTGACCCCACTACTTTATACTCTGTCTGCCGGTCGTGGCGGCGCGTCATCTACACGCGCTCATTCCCTCCATTTCTCTCTCTCTATGCTCTGTTGTCTTGTTCATCTTCGAATTCGATCCAGTTCTACAACTTCGACCCGGTTTCGTCAAAGTGGGGTGCTCTTCCCGCCACGCCGCCGGACCCGCCTCTCCGCCTCTTCCTCCGCCACCCGGCTTTCATATCCCGAAACCTCCCGATCCAATCCGTCTCCGCATCAGGCAACCTGGTCCTCCTCGCCGCCACCACTCATAATCTCTTTCCTGCTCTCCCCCGGCCGCTCAGTTTTGATCCCAGCACGAGCAGCTGGCTCTTCGGTCCCCCACTCGCCACCCCGCGTCGCTGGTGCGCAGCTGGAACCCTAAGGGGCGCGGTTTACGTGGCGAGTGGGATCGGGTCCCACTTCTCGGTGAACGTGGCTCGCTCCGTCGAGAGGTGGGACGTGAGCAAGAAGAACAAAAGTACTAGCCCGAACGGGAGCGAGTGCTTGCGATGGGAGTGGGAGAGAGTGAGCTCCCTACGAGACGGCAGGTTCAGCAGAGACGCGATCGACGCCGTCGGCTGGAGAGGGAAGCTCTGCATGGTGAACGTGAAAGGCGACGCCCTCAAAGACGGCGTCGTCTACGACTCGGAGAAGGACACGTGGCAGGACATGCCGGAGGGAATGATCGCCGGGTGGAAGGGGCCGGTGGCGGCCATGGACGAGGACGTGATGTACGTGGTGGACGAGGCCAAGGGAGCTCTGAGAAGGTACGATCCGGGGAGGGACACGTGGCACCAGATACTGGAGTCAGAGAGCCTGAAAGGGGCTGATCAGATTGCGGCAGGAGGCGGCCGTGTTTGTGCTGTTTGCCGAGGTCGGATTGTGGTGGTGGACGTGGCGGCGCCACGGCCGAGAGTGTGGGATGTGGAAACGCCGCCGGGGCTTGAAGCGGTGGCGATTCATATCTTGCCGAGAATAGGAGGGGAGTGTATTCCATGCACTGTCAGTGACTGGGTGATCATGGGTTACAGCGAAACAGGGACCAAATCAAAGTATTGCTTGACCAACAAGAGAGGTTGTAAGAAAGACAATCTGAACTACAAGCTCTACTGGAAGCTTCCAAAGTGGGATTCTCAAGCTGATGATGTTAGGTTCAATGTATTTGACATCTCCACATATCGTGCAAATCAGCAAGAGTTGATTATCAATGCTGTCATGAGTGGAAGAGATGTTCTAGTGATTATGGCTGCAGGTGGTGGCAAGAGTCTCTGTTACCAGCTTCCAGCTATTCTTCGTGATGGAGTTGCGCTTGTTGTCAACCCACTACTTCCTTTGATTCAGGACCAGGTGATGGGCTTGGAAGCTTTCGGGATTCCAGCTCATATGCTGACATCAACTACAAGTAAGGAGGAAGAGAAGAATTTGAAGATATTGTATGTGACGCCAGAAAAGATATCGAAGAGTAAGAGGTTTATGTCAAAACTTGAAAAGTGCCATCATGCTGGTCGTCCCTCTCTAATTTCTATTGATGAGGCACATTGTCGCAGCCACTGGGGCCATGATTTTCGAACCAATTACAAAATTCTGGGTATCCTCAAGACTGATCCAGTGATTGCTTTGACTGCAACTGCTACCCAGAAAGTCCAAAGGGAACTTCTGCTGATTAACAGGTATAAGCATAGAGATCCAAATTCATCAAATGGTACAGCAAAGATCAGGCAAATAAAGATCAGCATATGGTTTCTTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0009628 GO:0031461 GO:0031463 GO:0032991 GO:0044424 GO:0044464 GO:0050896 GO:0080167 GO:1902494 GO:1990234
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kelch_6

Protein Analysis

639

Amino Acids

71.07

Weight (kDa)

9.27

Isoelectric Point (pI)

48.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_FKB95 PF25210 157 - 352 4.4e-08 FKB95, Kelch-repeats domain
DEAD PF00270 452 - 604 1.3e-20 DEAD/DEAH box helicase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011373)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31350 AT1G31350
fragaria_vesca FvH4_5g24190
malus_domestica MD06G1017400.v1.1 MD06G1017500.v1.1 MD07G1079500.v1.1
prunus_persica Prupe.2G102300_v2.0.a1 Prupe.2G102400_v2.0.a1 Prupe.5G018500_v2.0.a1
pyrus_communis pycom06g01420
rosa_chinensis RchiOBHm_Chr7g0213971
rosa_laevigata RLG00000002765
rosa_multiflora Rmu_sc0000328.1_g000002
rosa_roxburghii Rroxscaffold_3G00245610
rosa_rugosa Rorug07G0145100
rosa_samantha Rh7AG278400 Rh7BG271900 Rh7CG297400 Rh7DG283900
rosa_wichuraiana Rw7G023950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1406
AasI GACNNNNNNGTC 1 cut(s) 800
Acc16I TGCGCA 1 cut(s) 532
Acc36I ACCTGC 2 cut(s) 702, 1406
AccB1I GGYRCC 2 cut(s) 957, 1066
AccB7I CCANNNNNTGG 2 cut(s) 967, 1516
AccBSI CCGCTC 1 cut(s) 463
AccI GTMKAC 1 cut(s) 804
AccII CGCG 5 cut(s) 189, 202, 520, 554, 728
AclWI GGATC 7 cut(s) 256, 376, 467, 581, 932, 1763, 1844
AcoI YGGCCR 4 cut(s) 458, 876, 1015, 1073
AcsI RAATTY 4 cut(s) 256, 1585, 1746, 1855
AcvI CACGTG 2 cut(s) 825, 954
AcyI GRCGYC 5 cut(s) 735, 783, 798, 1067, 1607
AfaI GTAC 4 cut(s) 646, 899, 935, 1870
AfiI CCNNNNNNNGG 8 cut(s) 355, 589, 615, 744, 967, 988, 1142, 1516
AflIII ACRYGT 3 cut(s) 21, 822, 951
AgsI TTSAA 4 cut(s) 1112, 1321, 1591, 1652
AjiI CACGTC 4 cut(s) 22, 625, 892, 1060
AjnI CCWGG 3 cut(s) 126, 408, 1509
AjuI GAANNNNNNNTTGG 4 cut(s) 1279, 1311, 1803, 1835
AloI GAACNNNNNNTCC 2 cut(s) 1380, 1412
Alw21I GWGCWC 3 cut(s) 307, 698, 925
Alw26I GTCTC 4 cut(s) 397, 699, 717, 1436
AlwI GGATC 7 cut(s) 256, 376, 467, 581, 932, 1763, 1844
AlwNI CAGNNNCTG 3 cut(s) 967, 1176, 1716
AoxI GGCC 8 cut(s) 129, 458, 866, 876, 912, 1015, 1073, 1720
ApeKI GCWGC 9 cut(s) 79, 82, 85, 88, 91, 486, 533, 1412, 1710
ApoI RAATTY 4 cut(s) 256, 1585, 1746, 1855
ArsI GACNNNNNNTTYG 2 cut(s) 783, 815
AspLEI GCGC 6 cut(s) 189, 204, 533, 554, 1069, 1474
AspS9I GGNCC 9 cut(s) 115, 325, 412, 500, 579, 866, 1206, 1507, 1720
AsuC2I CCSGG 8 cut(s) 105, 113, 284, 356, 457, 856, 942, 1104
AsuHPI GGTGA 4 cut(s) 604, 778, 1192, 1525
AsuII TTCGAA 2 cut(s) 254, 1732
AvaII GGWCC 7 cut(s) 115, 325, 412, 500, 579, 1206, 1507
AxyI CCTNAGG 1 cut(s) 545
BaeI ACNNNNGTAYC 2 cut(s) 956, 989
BanI GGYRCC 2 cut(s) 957, 1066
BanII GRGCYC 2 cut(s) 698, 925
BauI CACGAG 1 cut(s) 481
BbrPI CACGTG 2 cut(s) 825, 954
Bbv12I GWGCWC 3 cut(s) 307, 698, 925
BbvI GCAGC 9 cut(s) 66, 94, 97, 100, 103, 498, 545, 1399, 1722
BccI CCATC 4 cut(s) 669, 1457, 1510, 1668
BceAI ACGGC 5 cut(s) 722, 724, 811, 1002, 1088
BciT130I CCWGG 3 cut(s) 128, 410, 1511
BciVI GTATCC 1 cut(s) 1766
BclI TGATCA 2 cut(s) 994, 1182
BcnI CCSGG 8 cut(s) 105, 113, 284, 356, 457, 856, 942, 1104
BcoDI GTCTC 4 cut(s) 397, 699, 717, 1436
BfaI CTAG 3 cut(s) 143, 648, 1400
BfmI CTRYAG 2 cut(s) 80, 1413
BfoI RGCGCY 1 cut(s) 1070
BfuAI ACCTGC 2 cut(s) 702, 1406
BfuI GTATCC 1 cut(s) 1766
BglI GCCNNNNNGGC 2 cut(s) 1105, 1719
BmcAI AGTACT 1 cut(s) 646
Bme18I GGWCC 7 cut(s) 115, 325, 412, 500, 579, 1206, 1507
BmgBI CACGTC 4 cut(s) 22, 625, 892, 1060
BmgT120I GGNCC 9 cut(s) 115, 325, 412, 500, 579, 866, 1206, 1507, 1720
BmrI ACTGGG 2 cut(s) 1186, 1726
BmsI GCATC 1 cut(s) 407
BmuI ACTGGG 2 cut(s) 1186, 1726
BplI GAGNNNNNCTC 2 cut(s) 741, 773
BpmI CTGGAG 2 cut(s) 766, 989
Bpu14I TTCGAA 2 cut(s) 254, 1732
BpuEI CTTGAG 2 cut(s) 1284, 1745
BpuMI CCSGG 8 cut(s) 105, 113, 284, 356, 457, 856, 942, 1104
BsaAI YACGTR 4 cut(s) 562, 825, 901, 954
BsaBI GATNNNNATC 1 cut(s) 1127
BsaHI GRCGYC 5 cut(s) 735, 783, 798, 1067, 1607
BsaJI CCNNGG 8 cut(s) 126, 455, 879, 915, 941, 1036, 1070, 1103
BsaWI WCCGGW 1 cut(s) 16
Bsc4I CCNNNNNNNGG 8 cut(s) 355, 589, 615, 744, 967, 988, 1142, 1516
Bse118I RCCGGY 2 cut(s) 174, 868
Bse1I ACTGG 6 cut(s) 265, 972, 1181, 1280, 1721, 1772
Bse21I CCTNAGG 1 cut(s) 545
Bse8I GATNNNNATC 1 cut(s) 1127
BseBI CCWGG 3 cut(s) 128, 410, 1511
BseDI CCNNGG 8 cut(s) 126, 455, 879, 915, 941, 1036, 1070, 1103
BseGI GGATG 1 cut(s) 1093
BseJI GATNNNNATC 1 cut(s) 1127
BseLI CCNNNNNNNGG 8 cut(s) 355, 589, 615, 744, 967, 988, 1142, 1516
BseMII CTCAG 2 cut(s) 478, 917
BseNI ACTGG 6 cut(s) 265, 972, 1181, 1280, 1721, 1772
BseRI GAGGAG 1 cut(s) 407
BseX3I CGGCCG 3 cut(s) 458, 1015, 1073
BseXI GCAGC 9 cut(s) 66, 94, 97, 100, 103, 498, 545, 1399, 1722
BseYI CCCAGC 1 cut(s) 476
Bsh1236I CGCG 5 cut(s) 189, 202, 520, 554, 728
Bsh1285I CGRYCG 5 cut(s) 179, 461, 732, 1018, 1076
BshFI GGCC 8 cut(s) 131, 460, 868, 878, 914, 1017, 1075, 1722
BshNI GGYRCC 2 cut(s) 957, 1066
BsiEI CGRYCG 5 cut(s) 179, 461, 732, 1018, 1076
BsiHKAI GWGCWC 3 cut(s) 307, 698, 925
BslFI GGGAC 6 cut(s) 486, 565, 635, 962, 1219, 1659
BslI CCNNNNNNNGG 8 cut(s) 355, 589, 615, 744, 967, 988, 1142, 1516
BsmAI GTCTC 4 cut(s) 397, 699, 717, 1436
BsmBI CGTCTC 3 cut(s) 397, 699, 717
BsmFI GGGAC 6 cut(s) 486, 565, 635, 962, 1219, 1659
BsnI GGCC 8 cut(s) 131, 460, 868, 878, 914, 1017, 1075, 1722
Bsp119I TTCGAA 2 cut(s) 254, 1732
Bsp1286I GDGCHC 3 cut(s) 307, 698, 925
Bsp19I CCATGG 1 cut(s) 879
BspANI GGCC 8 cut(s) 131, 460, 868, 878, 914, 1017, 1075, 1722
BspCNI CTCAG 2 cut(s) 477, 918
BspFNI CGCG 5 cut(s) 189, 202, 520, 554, 728
BspHI TCATGA 1 cut(s) 1380
BspMAI CTGCAG 2 cut(s) 84, 1417
BspMI ACCTGC 2 cut(s) 702, 1406
BspPI GGATC 7 cut(s) 256, 376, 467, 581, 932, 1763, 1844
BspQI GCTCTTC 2 cut(s) 312, 500
BspT104I TTCGAA 2 cut(s) 254, 1732
BspT107I GGYRCC 2 cut(s) 957, 1066
BsrBI CCGCTC 1 cut(s) 463
BsrFI RCCGGY 2 cut(s) 174, 868
BsrI ACTGG 6 cut(s) 265, 972, 1181, 1280, 1721, 1772
BssAI RCCGGY 2 cut(s) 174, 868
BssECI CCNNGG 8 cut(s) 126, 455, 879, 915, 941, 1036, 1070, 1103
BssNI GRCGYC 5 cut(s) 735, 783, 798, 1067, 1607
BssSI CACGAG 1 cut(s) 481
BssT1I CCWWGG 2 cut(s) 879, 915
Bst2BI CACGAG 1 cut(s) 481
Bst2UI CCWGG 3 cut(s) 128, 410, 1511
Bst4CI ACNGT 1 cut(s) 1168
Bst6I CTCTTC 6 cut(s) 312, 347, 500, 1384, 1572, 1619
BstACI GRCGYC 5 cut(s) 735, 783, 798, 1067, 1607
BstAPI GCANNNNNTGC 1 cut(s) 835
BstBAI YACGTR 4 cut(s) 562, 825, 901, 954
BstBI TTCGAA 2 cut(s) 254, 1732
BstC8I GCNNGC 3 cut(s) 491, 604, 671
BstDEI CTNAG 3 cut(s) 464, 545, 926
BstDSI CCRYGG 2 cut(s) 879, 1070
BstF5I GGATG 1 cut(s) 1093
BstFNI CGCG 5 cut(s) 189, 202, 520, 554, 728
BstH2I RGCGCY 1 cut(s) 1070
BstHHI GCGC 6 cut(s) 189, 204, 533, 554, 1069, 1474
BstMAI GTCTC 4 cut(s) 397, 699, 717, 1436
BstMCI CGRYCG 5 cut(s) 179, 461, 732, 1018, 1076
BstNI CCWGG 3 cut(s) 128, 410, 1511
BstNSI RCATGY 1 cut(s) 838
BstSFI CTRYAG 2 cut(s) 80, 1413
BstUI CGCG 5 cut(s) 189, 202, 520, 554, 728
BstV1I GCAGC 9 cut(s) 66, 94, 97, 100, 103, 498, 545, 1399, 1722
BstX2I RGATCY 1 cut(s) 1849
BstXI CCANNNNNNTGG 1 cut(s) 1667
BstYI RGATCY 1 cut(s) 1849
BstZI CGGCCG 3 cut(s) 458, 1015, 1073
Bsu36I CCTNAGG 1 cut(s) 545
BsuI GTATCC 1 cut(s) 1766
BsuRI GGCC 8 cut(s) 131, 460, 868, 878, 914, 1017, 1075, 1722
BtgI CCRYGG 2 cut(s) 879, 1070
BtgZI GCGATG 1 cut(s) 688
BtrI CACGTC 4 cut(s) 22, 625, 892, 1060
BtsCI GGATG 1 cut(s) 1093
BtsIMutI CAGTG 4 cut(s) 1164, 1177, 1714, 1779
BveI ACCTGC 2 cut(s) 702, 1406
Cac8I GCNNGC 3 cut(s) 491, 604, 671
CaiI CAGNNNCTG 3 cut(s) 967, 1176, 1716
CciI TCATGA 1 cut(s) 1380
CfoI GCGC 6 cut(s) 189, 204, 533, 554, 1069, 1474
Cfr10I RCCGGY 2 cut(s) 174, 868
Cfr13I GGNCC 9 cut(s) 115, 325, 412, 500, 579, 866, 1206, 1507, 1720
CseI GACGC 7 cut(s) 178, 509, 734, 743, 787, 791, 1615
CsiI ACCWGGT 2 cut(s) 408, 1509
Csp6I GTAC 4 cut(s) 645, 898, 934, 1869
CviAII CATG 8 cut(s) 763, 835, 880, 1161, 1186, 1381, 1664, 1724
CviQI GTAC 4 cut(s) 645, 898, 934, 1869
DdeI CTNAG 3 cut(s) 464, 545, 926
DinI GGCGCC 1 cut(s) 1068
DrdI GACNNNNNNGTC 1 cut(s) 800
DseDI GACNNNNNNGTC 1 cut(s) 800
EaeI YGGCCR 4 cut(s) 458, 876, 1015, 1073
EagI CGGCCG 3 cut(s) 458, 1015, 1073
Eam1104I CTCTTC 6 cut(s) 312, 347, 500, 1384, 1572, 1619
EarI CTCTTC 6 cut(s) 312, 347, 500, 1384, 1572, 1619
EciI GGCGGA 2 cut(s) 326, 338
Ecl136II GAGCTC 2 cut(s) 696, 923
EclXI CGGCCG 3 cut(s) 458, 1015, 1073
Eco130I CCWWGG 2 cut(s) 879, 915
Eco147I AGGCCT 1 cut(s) 131
Eco24I GRGCYC 2 cut(s) 698, 925
Eco32I GATATC 1 cut(s) 1620
Eco47I GGWCC 7 cut(s) 115, 325, 412, 500, 579, 1206, 1507
Eco52I CGGCCG 3 cut(s) 458, 1015, 1073
Eco53kI GAGCTC 2 cut(s) 696, 923
Eco72I CACGTG 2 cut(s) 825, 954
Eco81I CCTNAGG 1 cut(s) 545
EcoICRI GAGCTC 2 cut(s) 696, 923
EcoO109I RGGNCCY 1 cut(s) 579
EcoRI GAATTC 1 cut(s) 256
EcoRII CCWGG 3 cut(s) 126, 408, 1509
EcoRV GATATC 1 cut(s) 1620
EcoT14I CCWWGG 2 cut(s) 879, 915
EcoT38I GRGCYC 2 cut(s) 698, 925
EgeI GGCGCC 1 cut(s) 1068
EheI GGCGCC 1 cut(s) 1068
ErhI CCWWGG 2 cut(s) 879, 915
Esp3I CGTCTC 3 cut(s) 397, 699, 717
FaeI CATG 8 cut(s) 766, 838, 883, 1164, 1189, 1384, 1667, 1727
FalI AAGNNNNNCTT 2 cut(s) 1208, 1240
FaqI GGGAC 6 cut(s) 486, 565, 635, 962, 1219, 1659
FatI CATG 8 cut(s) 762, 834, 879, 1160, 1185, 1380, 1663, 1723
FauI CCCGC 3 cut(s) 319, 336, 525
FauNDI CATATG 2 cut(s) 1548, 1901
FbaI TGATCA 2 cut(s) 994, 1182
FblI GTMKAC 1 cut(s) 804
FokI GGATG 1 cut(s) 1100
FriOI GRGCYC 2 cut(s) 698, 925
FspBI CTAG 3 cut(s) 143, 648, 1400
FspI TGCGCA 1 cut(s) 532
GlaI GCGC 6 cut(s) 188, 203, 532, 553, 1068, 1473
GsaI CCCAGC 1 cut(s) 480
GsuI CTGGAG 2 cut(s) 766, 989
HaeII RGCGCY 1 cut(s) 1070
HaeIII GGCC 8 cut(s) 131, 460, 868, 878, 914, 1017, 1075, 1722
HgaI GACGC 7 cut(s) 178, 509, 734, 743, 787, 791, 1615
HhaI GCGC 6 cut(s) 189, 204, 533, 554, 1069, 1474
Hin1I GRCGYC 5 cut(s) 735, 783, 798, 1067, 1607
Hin1II CATG 8 cut(s) 766, 838, 883, 1164, 1189, 1384, 1667, 1727
Hin6I GCGC 6 cut(s) 187, 202, 531, 552, 1067, 1472
HinP1I GCGC 6 cut(s) 187, 202, 531, 552, 1067, 1472
HincII GTYRAC 2 cut(s) 148, 1483
HindII GTYRAC 2 cut(s) 148, 1483
HindIII AAGCTT 2 cut(s) 1280, 1527
HinfI GANTC 9 cut(s) 43, 108, 809, 971, 1123, 1295, 1429, 1501, 1537
HphI GGTGA 4 cut(s) 604, 778, 1192, 1525
Hpy166II GTNNAC 8 cut(s) 148, 559, 595, 769, 805, 907, 1057, 1483
Hpy188I TCNGA 6 cut(s) 814, 927, 976, 999, 1044, 1260
Hpy188III TCNNGA 8 cut(s) 369, 379, 613, 1381, 1460, 1505, 1534, 1762
Hpy8I GTNNAC 8 cut(s) 148, 559, 595, 769, 805, 907, 1057, 1483
Hpy99I CGWCG 6 cut(s) 525, 614, 737, 743, 785, 803
HpyAV CCTTC 3 cut(s) 811, 856, 924
HpyCH4III ACNGT 1 cut(s) 1168
HpyCH4V TGCA 6 cut(s) 82, 762, 1164, 1349, 1415, 1790
HpyF3I CTNAG 3 cut(s) 464, 545, 926
Hsp92I GRCGYC 5 cut(s) 735, 783, 798, 1067, 1607
Hsp92II CATG 8 cut(s) 766, 838, 883, 1164, 1189, 1384, 1667, 1727
HspAI GCGC 6 cut(s) 187, 202, 531, 552, 1067, 1472
KasI GGCGCC 1 cut(s) 1066
KflI GGGWCCC 1 cut(s) 579
Ksp22I TGATCA 2 cut(s) 994, 1182
LguI GCTCTTC 2 cut(s) 312, 500
LmnI GCTCC 4 cut(s) 611, 660, 701, 920
Lsp1109I GCAGC 9 cut(s) 66, 94, 97, 100, 103, 498, 545, 1399, 1722
LweI GCATC 1 cut(s) 407
MabI ACCWGGT 2 cut(s) 408, 1509
MaeI CTAG 3 cut(s) 143, 648, 1400
MaeIII GTNAC 4 cut(s) 1172, 1190, 1436, 1603
MbiI CCGCTC 1 cut(s) 463
MflI RGATCY 1 cut(s) 1849
MhlI GDGCHC 3 cut(s) 307, 698, 925
MluCI AATT 6 cut(s) 256, 1585, 1683, 1738, 1746, 1855
Mly113I GGCGCC 1 cut(s) 1067
MlyI GAGTC 5 cut(s) 52, 102, 803, 980, 1438
MmeI TCCRAC 1 cut(s) 1022
MseI TTAA 1 cut(s) 1830
MspA1I CMGCKG 3 cut(s) 79, 489, 536
MvaI CCWGG 3 cut(s) 128, 410, 1511
MvnI CGCG 5 cut(s) 189, 202, 520, 554, 728
NarI GGCGCC 1 cut(s) 1067
NciI CCSGG 8 cut(s) 105, 113, 284, 356, 457, 856, 942, 1104
NcoI CCATGG 1 cut(s) 879
NdeI CATATG 2 cut(s) 1548, 1901
NlaIII CATG 8 cut(s) 766, 838, 883, 1164, 1189, 1384, 1667, 1727
NmeAIII GCCGAG 3 cut(s) 1061, 1101, 1161
NmuCI GTSAC 2 cut(s) 1172, 1603
NsbI TGCGCA 1 cut(s) 532
NspI RCATGY 1 cut(s) 838
NspV TTCGAA 2 cut(s) 254, 1732
PagI TCATGA 1 cut(s) 1380
PaqCI CACCTGC 1 cut(s) 1406
PceI AGGCCT 1 cut(s) 131
PciSI GCTCTTC 2 cut(s) 312, 500
PcsI WCGNNNNNNNCGW 3 cut(s) 777, 897, 906
PfeI GAWTC 4 cut(s) 1123, 1295, 1501, 1537
PflFI GACNNNGTC 2 cut(s) 737, 797
PflMI CCANNNNNTGG 2 cut(s) 967, 1516
PfoI TCCNGGA 1 cut(s) 111
Ple19I CGATCG 1 cut(s) 732
PleI GAGTC 5 cut(s) 51, 102, 803, 979, 1437
PluTI GGCGCC 1 cut(s) 1070
PmaCI CACGTG 2 cut(s) 825, 954
PmlI CACGTG 2 cut(s) 825, 954
PpsI GAGTC 5 cut(s) 51, 102, 803, 979, 1437
Ppu21I YACGTR 4 cut(s) 562, 825, 901, 954
PpuMI RGGWCCY 1 cut(s) 579
Psp124BI GAGCTC 2 cut(s) 698, 925
Psp5II RGGWCCY 1 cut(s) 579
Psp6I CCWGG 3 cut(s) 126, 408, 1509
PspCI CACGTG 2 cut(s) 825, 954
PspFI CCCAGC 1 cut(s) 476
PspGI CCWGG 3 cut(s) 126, 408, 1509
PspPI GGNCC 9 cut(s) 115, 325, 412, 500, 579, 866, 1206, 1507, 1720
PspPPI RGGWCCY 1 cut(s) 579
PstI CTGCAG 2 cut(s) 84, 1417
PstNI CAGNNNCTG 3 cut(s) 967, 1176, 1716
PsuI RGATCY 1 cut(s) 1849
PsyI GACNNNGTC 2 cut(s) 737, 797
PvuI CGATCG 1 cut(s) 732
PvuII CAGCTG 3 cut(s) 79, 489, 536
RsaI GTAC 4 cut(s) 646, 899, 935, 1870
RsaNI GTAC 4 cut(s) 645, 898, 934, 1869
SacI GAGCTC 2 cut(s) 698, 925
SapI GCTCTTC 2 cut(s) 312, 500
SaqAI TTAA 1 cut(s) 1830
Sau96I GGNCC 9 cut(s) 115, 325, 412, 500, 579, 866, 1206, 1507, 1720
ScaI AGTACT 1 cut(s) 646
SchI GAGTC 5 cut(s) 52, 102, 803, 980, 1438
SduI GDGCHC 3 cut(s) 307, 698, 925
SexAI ACCWGGT 2 cut(s) 408, 1509
SfaNI GCATC 1 cut(s) 407
SfcI CTRYAG 2 cut(s) 80, 1413
SfoI GGCGCC 1 cut(s) 1068
SfuI TTCGAA 2 cut(s) 254, 1732
SinI GGWCC 7 cut(s) 115, 325, 412, 500, 579, 1206, 1507
SmlI CTYRAG 2 cut(s) 1299, 1760
SmoI CTYRAG 2 cut(s) 1299, 1760
Sse9I AATT 6 cut(s) 256, 1585, 1683, 1738, 1746, 1855
SseBI AGGCCT 1 cut(s) 131
SspDI GGCGCC 1 cut(s) 1066
SspMI CTAG 3 cut(s) 143, 648, 1400
SstI GAGCTC 2 cut(s) 698, 925
StuI AGGCCT 1 cut(s) 131
StyI CCWWGG 2 cut(s) 879, 915
TaaI ACNGT 1 cut(s) 1168
TaqI TCGA 7 cut(s) 254, 260, 279, 612, 732, 1622, 1732
TaqII GACCGA 1 cut(s) 488
TasI AATT 6 cut(s) 256, 1585, 1683, 1738, 1746, 1855
TatI WGTACW 1 cut(s) 644
TauI GCSGC 9 cut(s) 187, 322, 425, 463, 878, 1007, 1017, 1067, 1102
TfiI GAWTC 4 cut(s) 1123, 1295, 1501, 1537
Tru1I TTAA 1 cut(s) 1830
Tru9I TTAA 1 cut(s) 1830
TscAI CASTG 4 cut(s) 1171, 1177, 1721, 1779
TseFI GTSAC 2 cut(s) 1172, 1603
TseI GCWGC 9 cut(s) 79, 82, 85, 88, 91, 486, 533, 1412, 1710
Tsp45I GTSAC 2 cut(s) 1172, 1603
TspDTI ATGAA 4 cut(s) 237, 352, 1115, 1848
TspGWI ACGGA 2 cut(s) 379, 598
TspRI CASTG 4 cut(s) 1171, 1177, 1721, 1779
Tth111I GACNNNGTC 2 cut(s) 737, 797
Van91I CCANNNNNTGG 2 cut(s) 967, 1516
VpaK11BI GGWCC 7 cut(s) 115, 325, 412, 500, 579, 1206, 1507
XapI RAATTY 4 cut(s) 256, 1585, 1746, 1855
XceI RCATGY 1 cut(s) 838
XmiI GTMKAC 1 cut(s) 804
XspI CTAG 3 cut(s) 143, 648, 1400
ZrmI AGTACT 1 cut(s) 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.