Rroxscaffold_3G00245610

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0011373
Physical Location & Seq
Reverse (-)
38649163 .. 38650331
1169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00245610.1

Sequence Viewer

Length: 1035 bp
ATGGCAAACTCCATACCGGAGGTGTCAAAGCGTAGAAGATTGAGTCAAAACGACAACGACAACAACCACAACCACAACCAGAACCACAACCAGCTGCAGCAGCAGCCCCTCCTGCCCGGACTCCCGGACCATATAGCCCAGGCCTTTCTACAACTTCGACCCGGTTTCGTCCAAGTGGGGGCTCTTCCCGCCACGCCGCCGGACCCGCCTCTCCGCCTCTTCCTCCGCCACCCGGCTTTCATATCCCGAAACCTCCCGATCCAATTCGTCTCCGCATCAGGCAACCTGGTCCTCCTCGCCGCCACCACTCATAATTTCTTTCCTGCTCTCCCCCGGCCGCTCAATTTTGATCCCAGCACGAGCAGCTGGCACTTCGGTCCCCCACTCGCCACCCCGCGTCGTTGGTGCGCAGCTGGAACCCTAAGGGGCGCGGTTTACGTGGCGAGTGGGATCGGGTCCCACTTCTCGGTGAACGTGGCTCGCTCCGTCGAGAAGTGGGATCTGAGCAAGAAAAGCAATAGTACTAGCCCGAACGGGAGCGAGTACTTGGGAGGGAAGTGGGAGAGAGTGAGCTCCCTACGAGACGGCAGGTTCAGCAGAGACGCGATCGACGCCGTCGGCTGGAGAGGGAAGCTCTGCATGGTGAACGTGAAAGGCTACGCCGTCAAAGACGGCGTCGTCTACGACTCGGAGAAGGACACGTGGCAGGACATGCCGGAGGGAATGATCGCCGGGTGGACGGGGCCGGTGGCGGCCATGGACGAGGACGTGATGTACGTGGTGGACGAGGCCAAGGGAGCTCTGAGAAGGTACGATCCGGGGAGGGACGCGTGGCACCAGATACTGGAGTCAGAGAGCCTGAAAGGGGCGGATCAGATTGCGGCAGGAGGCGGCCGTGTTTGTGCGGTTTGCCGCGGTCGGATTGTGGTGGTGGACGTGGCGGCGCCGCGGCCGAGAGTGTGGGATGTGGAAACGCCGTCGGGGCATGAAGCGGTGGCGATTCATATCTTGCCGAGAATGTGCCAGCTGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0009628 GO:0031461 GO:0031463 GO:0032991 GO:0044424 GO:0044464 GO:0050896 GO:0080167 GO:1902494 GO:1990234
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kelch_6

Protein Analysis

344

Amino Acids

37.76

Weight (kDa)

8.81

Isoelectric Point (pI)

51.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_FKB95 PF25210 116 - 311 4.4e-09 FKB95, Kelch-repeats domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011373)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31350 AT1G31350
fragaria_vesca FvH4_5g24190
malus_domestica MD06G1017400.v1.1 MD06G1017500.v1.1 MD07G1079500.v1.1
prunus_persica Prupe.2G102300_v2.0.a1 Prupe.2G102400_v2.0.a1 Prupe.5G018500_v2.0.a1
pyrus_communis pycom06g01420
rosa_chinensis RchiOBHm_Chr7g0213971
rosa_laevigata RLG00000002765
rosa_multiflora Rmu_sc0000328.1_g000002
rosa_roxburghii Rroxscaffold_3G00245610
rosa_rugosa Rorug07G0145100
rosa_samantha Rh7AG278400 Rh7BG271900 Rh7CG297400 Rh7DG283900
rosa_wichuraiana Rw7G023950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 677
Acc16I TGCGCA 1 cut(s) 409
Acc36I ACCTGC 1 cut(s) 579
AccB1I GGYRCC 2 cut(s) 834, 943
AccB7I CCANNNNNTGG 1 cut(s) 844
AccBSI CCGCTC 1 cut(s) 340
AccI GTMKAC 1 cut(s) 681
AccII CGCG 6 cut(s) 397, 431, 605, 830, 915, 949
AclWI GGATC 6 cut(s) 253, 344, 458, 507, 809, 879
AcoI YGGCCR 4 cut(s) 335, 753, 892, 950
AcvI CACGTG 1 cut(s) 702
AcyI GRCGYC 3 cut(s) 612, 675, 944
AfaI GTAC 4 cut(s) 523, 545, 776, 812
AfiI CCNNNNNNNGG 6 cut(s) 178, 232, 466, 621, 844, 865
AflIII ACRYGT 2 cut(s) 699, 828
AjiI CACGTC 2 cut(s) 769, 937
AjnI CCWGG 2 cut(s) 138, 285
AluBI AGCT 7 cut(s) 94, 366, 413, 573, 634, 800, 1027
AluI AGCT 7 cut(s) 94, 366, 413, 573, 634, 800, 1027
Alw21I GWGCWC 2 cut(s) 575, 802
Alw26I GTCTC 3 cut(s) 274, 576, 594
AlwI GGATC 6 cut(s) 253, 344, 458, 507, 809, 879
AlwNI CAGNNNCTG 1 cut(s) 844
AoxI GGCC 7 cut(s) 141, 335, 743, 753, 789, 892, 950
ApeKI GCWGC 6 cut(s) 94, 97, 100, 103, 363, 410
ArsI GACNNNNNNTTYG 2 cut(s) 660, 692
AspLEI GCGC 3 cut(s) 410, 431, 946
AspS9I GGNCC 6 cut(s) 127, 202, 289, 377, 456, 743
AsuC2I CCSGG 7 cut(s) 117, 125, 162, 233, 334, 733, 819
AsuHPI GGTGA 2 cut(s) 481, 655
AvaII GGWCC 5 cut(s) 127, 202, 289, 377, 456
AxyI CCTNAGG 1 cut(s) 422
BaeI ACNNNNGTAYC 2 cut(s) 833, 866
BanI GGYRCC 2 cut(s) 834, 943
BanII GRGCYC 3 cut(s) 184, 575, 802
BauI CACGAG 1 cut(s) 358
BbrPI CACGTG 1 cut(s) 702
Bbv12I GWGCWC 2 cut(s) 575, 802
BbvI GCAGC 6 cut(s) 81, 109, 112, 115, 375, 422
BceAI ACGGC 6 cut(s) 599, 601, 647, 688, 879, 961
BciT130I CCWGG 2 cut(s) 140, 287
BcnI CCSGG 7 cut(s) 117, 125, 162, 233, 334, 733, 819
BcoDI GTCTC 3 cut(s) 274, 576, 594
BfaI CTAG 1 cut(s) 525
BfmI CTRYAG 1 cut(s) 95
BfoI RGCGCY 1 cut(s) 947
BfuAI ACCTGC 1 cut(s) 579
BglI GCCNNNNNGGC 1 cut(s) 982
BmcAI AGTACT 2 cut(s) 523, 545
Bme1390I CCNGG 9 cut(s) 117, 125, 140, 162, 233, 287, 334, 733, 819
Bme18I GGWCC 5 cut(s) 127, 202, 289, 377, 456
BmgBI CACGTC 2 cut(s) 769, 937
BmgT120I GGNCC 6 cut(s) 127, 202, 289, 377, 456, 743
BmiI GGNNCC 8 cut(s) 204, 379, 418, 457, 458, 744, 836, 945
BmrFI CCNGG 9 cut(s) 117, 125, 140, 162, 233, 287, 334, 733, 819
BmsI GCATC 1 cut(s) 284
BplI GAGNNNNNCTC 2 cut(s) 618, 650
BpmI CTGGAG 2 cut(s) 643, 866
BpuMI CCSGG 7 cut(s) 117, 125, 162, 233, 334, 733, 819
BsaAI YACGTR 3 cut(s) 439, 702, 778
BsaBI GATNNNNATC 1 cut(s) 1004
BsaHI GRCGYC 3 cut(s) 612, 675, 944
BsaJI CCNNGG 7 cut(s) 138, 332, 756, 792, 818, 913, 947
BsaWI WCCGGW 1 cut(s) 16
Bsc4I CCNNNNNNNGG 6 cut(s) 178, 232, 466, 621, 844, 865
Bse118I RCCGGY 1 cut(s) 745
Bse1I ACTGG 1 cut(s) 849
Bse21I CCTNAGG 1 cut(s) 422
Bse8I GATNNNNATC 1 cut(s) 1004
BseBI CCWGG 2 cut(s) 140, 287
BseDI CCNNGG 7 cut(s) 138, 332, 756, 792, 818, 913, 947
BseGI GGATG 1 cut(s) 970
BseJI GATNNNNATC 1 cut(s) 1004
BseLI CCNNNNNNNGG 6 cut(s) 178, 232, 466, 621, 844, 865
BseMII CTCAG 2 cut(s) 494, 794
BseNI ACTGG 1 cut(s) 849
BseRI GAGGAG 1 cut(s) 284
BseX3I CGGCCG 3 cut(s) 335, 892, 950
BseXI GCAGC 6 cut(s) 81, 109, 112, 115, 375, 422
BseYI CCCAGC 1 cut(s) 353
Bsh1236I CGCG 6 cut(s) 397, 431, 605, 830, 915, 949
Bsh1285I CGRYCG 5 cut(s) 338, 609, 895, 919, 953
BshFI GGCC 7 cut(s) 143, 337, 745, 755, 791, 894, 952
BshNI GGYRCC 2 cut(s) 834, 943
BsiEI CGRYCG 5 cut(s) 338, 609, 895, 919, 953
BsiHKAI GWGCWC 2 cut(s) 575, 802
BslFI GGGAC 3 cut(s) 363, 442, 839
BslI CCNNNNNNNGG 6 cut(s) 178, 232, 466, 621, 844, 865
BsmAI GTCTC 3 cut(s) 274, 576, 594
BsmBI CGTCTC 3 cut(s) 274, 576, 594
BsmFI GGGAC 3 cut(s) 363, 442, 839
BsnI GGCC 7 cut(s) 143, 337, 745, 755, 791, 894, 952
Bsp1286I GDGCHC 3 cut(s) 184, 575, 802
Bsp143I GATC 8 cut(s) 258, 349, 450, 499, 606, 726, 814, 871
Bsp19I CCATGG 1 cut(s) 756
BspANI GGCC 7 cut(s) 143, 337, 745, 755, 791, 894, 952
BspCNI CTCAG 2 cut(s) 495, 795
BspFNI CGCG 6 cut(s) 397, 431, 605, 830, 915, 949
BspLI GGNNCC 8 cut(s) 204, 379, 418, 457, 458, 744, 836, 945
BspMAI CTGCAG 1 cut(s) 99
BspMI ACCTGC 1 cut(s) 579
BspPI GGATC 6 cut(s) 253, 344, 458, 507, 809, 879
BspQI GCTCTTC 1 cut(s) 189
BspT107I GGYRCC 2 cut(s) 834, 943
BsrBI CCGCTC 1 cut(s) 340
BsrFI RCCGGY 1 cut(s) 745
BsrI ACTGG 1 cut(s) 849
BssAI RCCGGY 1 cut(s) 745
BssECI CCNNGG 7 cut(s) 138, 332, 756, 792, 818, 913, 947
BssMI GATC 8 cut(s) 258, 349, 450, 499, 606, 726, 814, 871
BssNI GRCGYC 3 cut(s) 612, 675, 944
BssSI CACGAG 1 cut(s) 358
BssT1I CCWWGG 2 cut(s) 756, 792
Bst2BI CACGAG 1 cut(s) 358
Bst2UI CCWGG 2 cut(s) 140, 287
Bst6I CTCTTC 2 cut(s) 189, 224
BstACI GRCGYC 3 cut(s) 612, 675, 944
BstAPI GCANNNNNTGC 1 cut(s) 712
BstBAI YACGTR 3 cut(s) 439, 702, 778
BstC8I GCNNGC 3 cut(s) 368, 481, 1025
BstDEI CTNAG 3 cut(s) 422, 503, 803
BstDSI CCRYGG 3 cut(s) 756, 913, 947
BstF5I GGATG 1 cut(s) 970
BstFNI CGCG 6 cut(s) 397, 431, 605, 830, 915, 949
BstH2I RGCGCY 1 cut(s) 947
BstHHI GCGC 3 cut(s) 410, 431, 946
BstKTI GATC 8 cut(s) 261, 352, 453, 502, 609, 729, 817, 874
BstMAI GTCTC 3 cut(s) 274, 576, 594
BstMBI GATC 8 cut(s) 258, 349, 450, 499, 606, 726, 814, 871
BstMCI CGRYCG 5 cut(s) 338, 609, 895, 919, 953
BstNI CCWGG 2 cut(s) 140, 287
BstNSI RCATGY 1 cut(s) 715
BstSCI CCNGG 9 cut(s) 115, 123, 138, 160, 231, 285, 332, 731, 817
BstSFI CTRYAG 1 cut(s) 95
BstUI CGCG 6 cut(s) 397, 431, 605, 830, 915, 949
BstV1I GCAGC 6 cut(s) 81, 109, 112, 115, 375, 422
BstX2I RGATCY 1 cut(s) 499
BstYI RGATCY 1 cut(s) 499
BstZI CGGCCG 3 cut(s) 335, 892, 950
Bsu36I CCTNAGG 1 cut(s) 422
BsuRI GGCC 7 cut(s) 143, 337, 745, 755, 791, 894, 952
BtgI CCRYGG 3 cut(s) 756, 913, 947
BtrI CACGTC 2 cut(s) 769, 937
BtsCI GGATG 1 cut(s) 970
BveI ACCTGC 1 cut(s) 579
Cac8I GCNNGC 3 cut(s) 368, 481, 1025
CaiI CAGNNNCTG 1 cut(s) 844
CfoI GCGC 3 cut(s) 410, 431, 946
Cfr10I RCCGGY 1 cut(s) 745
Cfr13I GGNCC 6 cut(s) 127, 202, 289, 377, 456, 743
Cfr42I CCGCGG 2 cut(s) 916, 950
CseI GACGC 5 cut(s) 386, 611, 620, 664, 836
CsiI ACCWGGT 1 cut(s) 285
Csp6I GTAC 4 cut(s) 522, 544, 775, 811
CviAII CATG 4 cut(s) 640, 712, 757, 986
CviQI GTAC 4 cut(s) 522, 544, 775, 811
DdeI CTNAG 3 cut(s) 422, 503, 803
DinI GGCGCC 1 cut(s) 945
DpnI GATC 8 cut(s) 260, 351, 452, 501, 608, 728, 816, 873
DpnII GATC 8 cut(s) 258, 349, 450, 499, 606, 726, 814, 871
DrdI GACNNNNNNGTC 1 cut(s) 677
DseDI GACNNNNNNGTC 1 cut(s) 677
EaeI YGGCCR 4 cut(s) 335, 753, 892, 950
EagI CGGCCG 3 cut(s) 335, 892, 950
Eam1104I CTCTTC 2 cut(s) 189, 224
EarI CTCTTC 2 cut(s) 189, 224
EciI GGCGGA 3 cut(s) 203, 215, 884
Ecl136II GAGCTC 2 cut(s) 573, 800
EclXI CGGCCG 3 cut(s) 335, 892, 950
Eco130I CCWWGG 2 cut(s) 756, 792
Eco147I AGGCCT 1 cut(s) 143
Eco24I GRGCYC 3 cut(s) 184, 575, 802
Eco47I GGWCC 5 cut(s) 127, 202, 289, 377, 456
Eco52I CGGCCG 3 cut(s) 335, 892, 950
Eco53kI GAGCTC 2 cut(s) 573, 800
Eco72I CACGTG 1 cut(s) 702
Eco81I CCTNAGG 1 cut(s) 422
EcoICRI GAGCTC 2 cut(s) 573, 800
EcoO109I RGGNCCY 1 cut(s) 456
EcoRII CCWGG 2 cut(s) 138, 285
EcoT14I CCWWGG 2 cut(s) 756, 792
EcoT38I GRGCYC 3 cut(s) 184, 575, 802
EgeI GGCGCC 1 cut(s) 945
EheI GGCGCC 1 cut(s) 945
ErhI CCWWGG 2 cut(s) 756, 792
Esp3I CGTCTC 3 cut(s) 274, 576, 594
FaeI CATG 4 cut(s) 643, 715, 760, 989
FaqI GGGAC 3 cut(s) 363, 442, 839
FatI CATG 4 cut(s) 639, 711, 756, 985
FauI CCCGC 3 cut(s) 196, 213, 402
FblI GTMKAC 1 cut(s) 681
FokI GGATG 1 cut(s) 977
FriOI GRGCYC 3 cut(s) 184, 575, 802
FspBI CTAG 1 cut(s) 525
FspI TGCGCA 1 cut(s) 409
GlaI GCGC 3 cut(s) 409, 430, 945
GsaI CCCAGC 1 cut(s) 357
GsuI CTGGAG 2 cut(s) 643, 866
HaeII RGCGCY 1 cut(s) 947
HaeIII GGCC 7 cut(s) 143, 337, 745, 755, 791, 894, 952
HgaI GACGC 5 cut(s) 386, 611, 620, 664, 836
HhaI GCGC 3 cut(s) 410, 431, 946
Hin1I GRCGYC 3 cut(s) 612, 675, 944
Hin1II CATG 4 cut(s) 643, 715, 760, 989
Hin6I GCGC 3 cut(s) 408, 429, 944
HinP1I GCGC 3 cut(s) 408, 429, 944
HinfI GANTC 5 cut(s) 43, 120, 686, 848, 1000
HphI GGTGA 2 cut(s) 481, 655
Hpy166II GTNNAC 7 cut(s) 436, 472, 646, 682, 738, 784, 934
Hpy188I TCNGA 6 cut(s) 504, 691, 804, 853, 876, 921
Hpy188III TCNNGA 3 cut(s) 246, 256, 490
Hpy8I GTNNAC 7 cut(s) 436, 472, 646, 682, 738, 784, 934
Hpy99I CGWCG 6 cut(s) 402, 491, 614, 620, 680, 982
HpyAV CCTTC 2 cut(s) 688, 801
HpyCH4IV ACGT 7 cut(s) 438, 474, 648, 701, 768, 777, 936
HpyCH4V TGCA 2 cut(s) 97, 639
HpyF3I CTNAG 3 cut(s) 422, 503, 803
HpySE526I ACGT 7 cut(s) 438, 474, 648, 701, 768, 777, 936
Hsp92I GRCGYC 3 cut(s) 612, 675, 944
Hsp92II CATG 4 cut(s) 643, 715, 760, 989
HspAI GCGC 3 cut(s) 408, 429, 944
KasI GGCGCC 1 cut(s) 943
KflI GGGWCCC 1 cut(s) 456
KspI CCGCGG 2 cut(s) 916, 950
Kzo9I GATC 8 cut(s) 258, 349, 450, 499, 606, 726, 814, 871
LguI GCTCTTC 1 cut(s) 189
LmnI GCTCC 4 cut(s) 488, 537, 578, 797
Lsp1109I GCAGC 6 cut(s) 81, 109, 112, 115, 375, 422
LweI GCATC 1 cut(s) 284
MabI ACCWGGT 1 cut(s) 285
MaeI CTAG 1 cut(s) 525
MaeII ACGT 7 cut(s) 438, 474, 648, 701, 768, 777, 936
MalI GATC 8 cut(s) 260, 351, 452, 501, 608, 728, 816, 873
MbiI CCGCTC 1 cut(s) 340
MboI GATC 8 cut(s) 258, 349, 450, 499, 606, 726, 814, 871
MboII GAAGA 3 cut(s) 48, 176, 211
MflI RGATCY 1 cut(s) 499
MhlI GDGCHC 3 cut(s) 184, 575, 802
MluCI AATT 3 cut(s) 263, 313, 343
MluI ACGCGT 1 cut(s) 828
Mly113I GGCGCC 1 cut(s) 944
MlyI GAGTC 4 cut(s) 52, 114, 680, 857
MmeI TCCRAC 1 cut(s) 899
MspA1I CMGCKG 6 cut(s) 94, 366, 413, 915, 949, 1027
MspR9I CCNGG 9 cut(s) 117, 125, 140, 162, 233, 287, 334, 733, 819
MvaI CCWGG 2 cut(s) 140, 287
MvnI CGCG 6 cut(s) 397, 431, 605, 830, 915, 949
NarI GGCGCC 1 cut(s) 944
NciI CCSGG 7 cut(s) 117, 125, 162, 233, 334, 733, 819
NcoI CCATGG 1 cut(s) 756
NdeII GATC 8 cut(s) 258, 349, 450, 499, 606, 726, 814, 871
NlaIII CATG 4 cut(s) 643, 715, 760, 989
NlaIV GGNNCC 8 cut(s) 204, 379, 418, 457, 458, 744, 836, 945
NmeAIII GCCGAG 1 cut(s) 978
NsbI TGCGCA 1 cut(s) 409
NspI RCATGY 1 cut(s) 715
PceI AGGCCT 1 cut(s) 143
PciSI GCTCTTC 1 cut(s) 189
PcsI WCGNNNNNNNCGW 2 cut(s) 774, 783
PfeI GAWTC 1 cut(s) 1000
PflFI GACNNNGTC 2 cut(s) 614, 674
PflMI CCANNNNNTGG 1 cut(s) 844
PfoI TCCNGGA 1 cut(s) 123
Ple19I CGATCG 1 cut(s) 609
PleI GAGTC 4 cut(s) 51, 114, 680, 856
PluTI GGCGCC 1 cut(s) 947
PmaCI CACGTG 1 cut(s) 702
PmlI CACGTG 1 cut(s) 702
PpsI GAGTC 4 cut(s) 51, 114, 680, 856
Ppu21I YACGTR 3 cut(s) 439, 702, 778
PpuMI RGGWCCY 1 cut(s) 456
Psp124BI GAGCTC 2 cut(s) 575, 802
Psp5II RGGWCCY 1 cut(s) 456
Psp6I CCWGG 2 cut(s) 138, 285
PspCI CACGTG 1 cut(s) 702
PspFI CCCAGC 1 cut(s) 353
PspGI CCWGG 2 cut(s) 138, 285
PspN4I GGNNCC 8 cut(s) 204, 379, 418, 457, 458, 744, 836, 945
PspPI GGNCC 6 cut(s) 127, 202, 289, 377, 456, 743
PspPPI RGGWCCY 1 cut(s) 456
PstI CTGCAG 1 cut(s) 99
PstNI CAGNNNCTG 1 cut(s) 844
PsuI RGATCY 1 cut(s) 499
PsyI GACNNNGTC 2 cut(s) 614, 674
PvuI CGATCG 1 cut(s) 609
PvuII CAGCTG 4 cut(s) 94, 366, 413, 1027
RsaI GTAC 4 cut(s) 523, 545, 776, 812
RsaNI GTAC 4 cut(s) 522, 544, 775, 811
SacI GAGCTC 2 cut(s) 575, 802
SacII CCGCGG 2 cut(s) 916, 950
SapI GCTCTTC 1 cut(s) 189
Sau3AI GATC 8 cut(s) 258, 349, 450, 499, 606, 726, 814, 871
Sau96I GGNCC 6 cut(s) 127, 202, 289, 377, 456, 743
ScaI AGTACT 2 cut(s) 523, 545
SchI GAGTC 4 cut(s) 52, 114, 680, 857
ScrFI CCNGG 9 cut(s) 117, 125, 140, 162, 233, 287, 334, 733, 819
SduI GDGCHC 3 cut(s) 184, 575, 802
SexAI ACCWGGT 1 cut(s) 285
SfaNI GCATC 1 cut(s) 284
SfcI CTRYAG 1 cut(s) 95
SfoI GGCGCC 1 cut(s) 945
Sfr303I CCGCGG 2 cut(s) 916, 950
SgrBI CCGCGG 2 cut(s) 916, 950
SinI GGWCC 5 cut(s) 127, 202, 289, 377, 456
Sse9I AATT 3 cut(s) 263, 313, 343
SseBI AGGCCT 1 cut(s) 143
SspDI GGCGCC 1 cut(s) 943
SspMI CTAG 1 cut(s) 525
SstI GAGCTC 2 cut(s) 575, 802
StuI AGGCCT 1 cut(s) 143
StyD4I CCNGG 9 cut(s) 115, 123, 138, 160, 231, 285, 332, 731, 817
StyI CCWWGG 2 cut(s) 756, 792
TaiI ACGT 7 cut(s) 441, 477, 651, 704, 771, 780, 939
TaqI TCGA 3 cut(s) 157, 489, 609
TaqII GACCGA 1 cut(s) 365
TasI AATT 3 cut(s) 263, 313, 343
TatI WGTACW 2 cut(s) 521, 543
TfiI GAWTC 1 cut(s) 1000
TseI GCWGC 6 cut(s) 94, 97, 100, 103, 363, 410
TspDTI ATGAA 3 cut(s) 229, 992, 1002
TspGWI ACGGA 1 cut(s) 475
Tth111I GACNNNGTC 2 cut(s) 614, 674
Van91I CCANNNNNTGG 1 cut(s) 844
VpaK11BI GGWCC 5 cut(s) 127, 202, 289, 377, 456
XceI RCATGY 1 cut(s) 715
XmiI GTMKAC 1 cut(s) 681
XspI CTAG 1 cut(s) 525
ZrmI AGTACT 2 cut(s) 523, 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.