Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008551

Physical Location & Seq

Genomic Coordinates Forward (+)

59186437 .. 59188353

Gene Structure 1917 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004415

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGGACCCTTTTCCCGGCAAACCGCAGCTCCTCCGCCTCCTCACCTTCCTCTCCCTCCTCCTCCTCATCCACGGCGGGAGGCTCAACCTCGACCCTTCAGACCTTCAAGCCCTCATCACTGTCCAAACCCACCTCGGCTTCCACACCCCAGACAGAGCCAAACCCACCAACCCATGCAACACTCCCGGCGTCTTCTGCGAGAGAAGACTCTCCAACAACACCTACGTCCTCAAAATCACTAGACTCGTCTTCAAGTCCCACCTCCTCTCCGGCTCTCTGTCTCCGGCAATCGGACAGCTCCCCGAGCTTAAAGAGCTCTCTCTTCCGGACAACAGCCTCGTTGACCAAGTCCCGCCCGAAATCGCTGACTGCAAGAAGCTGGAGATCCTCAACCTCGGAAACAACCAATTTTCGGGTGAAGTTCCTTCTCAGCTCTCTTCTCTAATCAGGCTACGAATACTCGACCTTTCCTCCAACAAGTTCTCCGGCAACTTGAGCTTCTTGAAGCATTTTCCCAACTTGGAAAATCTCTCCATTGCCGACAATCTCTTCTCCGGGAAGATCCCAGCTTCGGTTCGTTCTTTTCGCAATCTCAGGTTCTTCAACTTCGCCGGAAATGAGTTCCTGGAAGGCTCTTCACCTAAGTTGAAAAGGGTCGAGGTTTCAGCTTCTTCCGAGGTTCCAAGGCGTTTCATTTTTGCTGAAACATCAAACACCACCACCGCAGCAAAAACCAACAAAAGTAATTCAATCGCTCAAGCACCCTCCGGTTCTAATGCTCAAGCTCCAGGTCCATCTCCACTACCGAAGAAGGAGAAGAAGAGCAAGAAGAAGAAAATCGGAGGCTGGCTGCTCGGGTTCTTCGCCGGAGCGCTGGCCGGTAGCATATCCGGGTTCATCTTCTCTCTGCTGTTCAAGCTGCTCTTGGCTGTGGTTAGAGGAGGTGGAGGCAAGGACTCTGGTCCGGCCATTTTCAGTTCTCTGATTAAGAAAAAAGAGGACTTGGCTTTTCTGGAGAAAGAAGACGGGCTTGCTTCGTTGGAACTCATCGGAAGTGGAGGATGTGGACAGGTTTACAAAGCTGAGTTGCCAGGAAGCAACGGGAAGATAATCGCTATTAAGAAGATTATTCAACCTCCTAAGGAAGCGGCAGAGCTGACGGATGAAGACAGCAAGCAGATGCATAAGAAGATGCGTCAAATTCGGTCGGAGATCAATACCGTGGGACAAATTCGACATCGGAATCTGCTTCCTCTGTTGGCACATGTGTCCCGGCCGGACTGTCATCTGCTGGTGTATGAGTACATGAAAAATGGGAGCTTACAAGACATGTTAACTGAGGTTTCTGAAGGGAGAAAGGAACTGGATTGGTTAACAAGGCACAGGATTGCAATAGGAATCGCTTCAGGGCTTGAATATCTCCATGTGCACCATACACCTCACATCATTCACAGGGATCTGAAGCCAGCAAACGTCCTGCTTGATGACGATATGGAAGCTCGAATTGCAGATTTTGGGCTTGCGAAAGCAATGCCTGACTACCAGACACATATCACGACTTCAAATGTGGCAGGAACGGTTGGTTACATTGCACCGGAGTATCATCAGACACTCAAGTTCACAGACAAGTGTGATATATACAGCTTCGGGGTATTGCTCGGGGTACTGATCATAGGAAAGCTACCGTCTGATGAATTTTTCCAGACCACCAGCGAGATGAGTCTGGTTAAGTGGATGAAGAATGTGCTGACGTCAGAGGATCCTAAGCAGGCAATCGACTCAAAATTGATCGGAAATGGATTTGAGGACCAAATGCTCTTGGTTCTAAAGATAGCATGCTTTTGCACAGTGGATAACCCGAAAGAGAGACCTAATAGTAAGGATGTTAGGTGCATGTTGGATCAAATCAGGCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004713 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010941 GO:0010942 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019538 GO:0031347 GO:0031349 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

639

Amino Acids

70.4

Weight (kDa)

9.07

Isoelectric Point (pI)

37.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	101 - 161	3.1e-07	Leucine rich repeat
Pkinase	PF00069	347 - 626	5.1e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	347 - 580	1.2e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31880
fragaria_vesca	FvH4_5g06700
malus_domestica	MD14G1167300.v1.1 MD14G1167400.v1.1
prunus_persica	Prupe.5G161700_v2.0.a1
pyrus_communis	pycom06g14450 pycom14g13960 pycom14g13970
rosa_chinensis	RchiOBHm_Chr7g0191951 RchiOBHm_Chr7g0191971
rosa_laevigata	RLG00000004413 RLG00000004415
rosa_roxburghii	Rroxscaffold_3G00263400 Rroxscaffold_3G00263440
rosa_rugosa	Rorug06G0511800 Rorug06G0511900
rosa_samantha	Rh7AG122200 Rh7AG122300 Rh7BG123900 Rh7CG126400 Rh7CG126600
rosa_wichuraiana	Rw7G010400 Rw7G010410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1754
AccIII	TCCGGA	1 cut(s)	325
AciI	CCGC	6 cut(s)	23, 34, 75, 353, 723, 1148
AclWI	GGATC	6 cut(s)	379, 556, 1464, 1754, 1767, 1908
AcoI	YGGCCR	3 cut(s)	876, 966, 1274
AcsI	RAATTY	3 cut(s)	1200, 1230, 1694
AcuI	CTGAAG	4 cut(s)	81, 1368, 1389, 1481
AcyI	GRCGYC	2 cut(s)	189, 1751
AfaI	GTAC	2 cut(s)	1304, 1665
AfeI	AGCGCT	1 cut(s)	873
AfiI	CCNNNNNNNGG	4 cut(s)	14, 290, 412, 571
AflIII	ACRYGT	2 cut(s)	1264, 1329
AjnI	CCWGG	3 cut(s)	624, 787, 1090
Alw21I	GWGCWC	2 cut(s)	318, 1431
Alw26I	GTCTC	2 cut(s)	285, 1861
Alw44I	GTGCAC	1 cut(s)	1427
AlwI	GGATC	6 cut(s)	379, 556, 1464, 1754, 1767, 1908
Ama87I	CYCGRG	3 cut(s)	302, 854, 1658
Aor13HI	TCCGGA	1 cut(s)	325
Aor51HI	AGCGCT	1 cut(s)	873
AoxI	GGCC	3 cut(s)	876, 966, 1274
ApaLI	GTGCAC	1 cut(s)	1427
ApeKI	GCWGC	4 cut(s)	25, 725, 850, 919
ApoI	RAATTY	3 cut(s)	1200, 1230, 1694
Asp700I	GAANNNNTTC	1 cut(s)	1402
AspLEI	GCGC	1 cut(s)	874
AspS9I	GGNCC	4 cut(s)	4, 791, 962, 1807
AsuC2I	CCSGG	5 cut(s)	15, 186, 556, 892, 1273
AsuHPI	GGTGA	3 cut(s)	34, 428, 630
AvaI	CYCGRG	3 cut(s)	302, 854, 1658
AvaII	GGWCC	4 cut(s)	4, 791, 962, 1807
AxyI	CCTNAGG	1 cut(s)	1140
BaeGI	GKGCMC	1 cut(s)	1431
BaeI	ACNNNNGTAYC	2 cut(s)	1583, 1616
BamHI	GGATCC	1 cut(s)	1759
BanII	GRGCYC	1 cut(s)	318
BbsI	GAAGAC	5 cut(s)	184, 211, 241, 1029, 1173
Bbv12I	GWGCWC	2 cut(s)	318, 1431
BbvI	GCAGC	4 cut(s)	37, 737, 837, 906
BccI	CCATC	1 cut(s)	802
BceAI	ACGGC	1 cut(s)	88
BcgI	CGANNNNNNTGC	2 cut(s)	1513, 1547
BciT130I	CCWGG	3 cut(s)	626, 789, 1092
BclI	TGATCA	1 cut(s)	1668
BcnI	CCSGG	5 cut(s)	15, 186, 556, 892, 1273
BcoDI	GTCTC	2 cut(s)	285, 1861
BfaI	CTAG	1 cut(s)	240
BfoI	RGCGCY	1 cut(s)	875
BisI	GCNGC	5 cut(s)	26, 726, 851, 920, 1149
BlsI	GCNGC	5 cut(s)	27, 727, 852, 921, 1150
Bme1390I	CCNGG	8 cut(s)	15, 186, 556, 626, 789, 892, 1092, 1273
Bme18I	GGWCC	4 cut(s)	4, 791, 962, 1807
BmeT110I	CYCGRG	3 cut(s)	302, 854, 1658
BmgT120I	GGNCC	4 cut(s)	4, 791, 962, 1807
BmiI	GGNNCC	3 cut(s)	6, 681, 1761
BmrFI	CCNGG	8 cut(s)	15, 186, 556, 626, 789, 892, 1092, 1273
BmsI	GCATC	2 cut(s)	1170, 1182
BoxI	GACNNNNGTC	1 cut(s)	960
BpiI	GAAGAC	5 cut(s)	184, 211, 241, 1029, 1173
BpmI	CTGGAG	3 cut(s)	401, 771, 1034
Bpu10I	CCTNAGC	1 cut(s)	1764
BpuEI	CTTGAG	4 cut(s)	514, 741, 765, 1598
BpuMI	CCSGG	5 cut(s)	15, 186, 556, 892, 1273
BsaHI	GRCGYC	2 cut(s)	189, 1751
BsaI	GGTCTC	1 cut(s)	1861
BsaJI	CCNNGG	6 cut(s)	70, 133, 394, 675, 683, 1221
BsaWI	WCCGGW	3 cut(s)	325, 767, 1594
BsaXI	ACNNNNNCTCC	8 cut(s)	12, 42, 251, 281, 455, 467, 485, 497
Bsc4I	CCNNNNNNNGG	4 cut(s)	14, 290, 412, 571
Bse118I	RCCGGY	1 cut(s)	878
Bse1I	ACTGG	1 cut(s)	1368
Bse21I	CCTNAGG	1 cut(s)	1140
Bse3DI	GCAATG	3 cut(s)	534, 1536, 1587
BseAI	TCCGGA	1 cut(s)	325
BseBI	CCWGG	3 cut(s)	626, 789, 1092
BseDI	CCNNGG	6 cut(s)	70, 133, 394, 675, 683, 1221
BseGI	GGATG	5 cut(s)	66, 1067, 1168, 1740, 1888
BseLI	CCNNNNNNNGG	4 cut(s)	14, 290, 412, 571
BseMI	GCAATG	3 cut(s)	534, 1536, 1587
BseMII	CTCAG	4 cut(s)	443, 607, 1074, 1329
BseNI	ACTGG	1 cut(s)	1368
BseRI	GAGGAG	7 cut(s)	20, 29, 47, 50, 53, 254, 954
BseSI	GKGCMC	1 cut(s)	1431
BseX3I	CGGCCG	1 cut(s)	1274
BseXI	GCAGC	4 cut(s)	37, 737, 837, 906
BseYI	CCCAGC	1 cut(s)	565
Bsh1285I	CGRYCG	2 cut(s)	1208, 1277
BshFI	GGCC	3 cut(s)	878, 968, 1276
BsiEI	CGRYCG	2 cut(s)	1208, 1277
BsiHKAI	GWGCWC	2 cut(s)	318, 1431
BsiHKCI	CYCGRG	3 cut(s)	302, 854, 1658
BslFI	GGGAC	4 cut(s)	241, 335, 1239, 1255
BslI	CCNNNNNNNGG	4 cut(s)	14, 290, 412, 571
BsmAI	GTCTC	2 cut(s)	285, 1861
BsmFI	GGGAC	4 cut(s)	241, 335, 1239, 1255
BsnI	GGCC	3 cut(s)	878, 968, 1276
Bso31I	GGTCTC	1 cut(s)	1861
BsoBI	CYCGRG	3 cut(s)	302, 854, 1658
Bsp1286I	GDGCHC	2 cut(s)	318, 1431
Bsp13I	TCCGGA	1 cut(s)	325
Bsp143I	GATC	8 cut(s)	384, 561, 1212, 1456, 1668, 1759, 1788, 1900
BspACI	CCGC	6 cut(s)	23, 34, 75, 353, 723, 1148
BspANI	GGCC	3 cut(s)	878, 968, 1276
BspCNI	CTCAG	4 cut(s)	442, 606, 1075, 1330
BspEI	TCCGGA	1 cut(s)	325
BspLI	GGNNCC	3 cut(s)	6, 681, 1761
BspPI	GGATC	6 cut(s)	379, 556, 1464, 1754, 1767, 1908
BspQI	GCTCTTC	2 cut(s)	640, 815
BspTNI	GGTCTC	1 cut(s)	1861
BsrDI	GCAATG	3 cut(s)	534, 1536, 1587
BsrFI	RCCGGY	1 cut(s)	878
BsrI	ACTGG	1 cut(s)	1368
BssAI	RCCGGY	1 cut(s)	878
BssECI	CCNNGG	6 cut(s)	70, 133, 394, 675, 683, 1221
BssMI	GATC	8 cut(s)	384, 561, 1212, 1456, 1668, 1759, 1788, 1900
BssNI	GRCGYC	2 cut(s)	189, 1751
BssT1I	CCWWGG	1 cut(s)	683
Bst2UI	CCWGG	3 cut(s)	626, 789, 1092
Bst4CI	ACNGT	6 cut(s)	121, 1222, 1283, 1579, 1686, 1849
Bst6I	CTCTTC	5 cut(s)	327, 442, 554, 640, 815
BstACI	GRCGYC	2 cut(s)	189, 1751
BstC8I	GCNNGC	8 cut(s)	848, 876, 1032, 1175, 1467, 1521, 1770, 1837
BstDEI	CTNAG	7 cut(s)	429, 593, 642, 1083, 1140, 1338, 1764
BstDSI	CCRYGG	2 cut(s)	70, 1221
BstF5I	GGATG	5 cut(s)	66, 1067, 1168, 1740, 1888
BstH2I	RGCGCY	1 cut(s)	875
BstHHI	GCGC	1 cut(s)	874
BstKTI	GATC	8 cut(s)	387, 564, 1215, 1459, 1671, 1762, 1791, 1903
BstMAI	GTCTC	2 cut(s)	285, 1861
BstMBI	GATC	8 cut(s)	384, 561, 1212, 1456, 1668, 1759, 1788, 1900
BstMCI	CGRYCG	2 cut(s)	1208, 1277
BstMWI	GCNNNNNNNGC	6 cut(s)	195, 304, 313, 495, 916, 1505
BstNI	CCWGG	3 cut(s)	626, 789, 1092
BstNSI	RCATGY	4 cut(s)	1268, 1333, 1839, 1897
BstPAI	GACNNNNGTC	1 cut(s)	960
BstSCI	CCNGG	8 cut(s)	13, 184, 554, 624, 787, 890, 1090, 1271
BstSLI	GKGCMC	1 cut(s)	1431
BstV1I	GCAGC	4 cut(s)	37, 737, 837, 906
BstV2I	GAAGAC	5 cut(s)	184, 211, 241, 1029, 1173
BstX2I	RGATCY	4 cut(s)	384, 561, 1456, 1759
BstYI	RGATCY	4 cut(s)	384, 561, 1456, 1759
BstZI	CGGCCG	1 cut(s)	1274
Bsu36I	CCTNAGG	1 cut(s)	1140
BsuRI	GGCC	3 cut(s)	878, 968, 1276
BtgI	CCRYGG	2 cut(s)	70, 1221
BtsCI	GGATG	5 cut(s)	66, 1067, 1168, 1740, 1888
BtsIMutI	CAGTG	2 cut(s)	117, 1854
Cac8I	GCNNGC	8 cut(s)	848, 876, 1032, 1175, 1467, 1521, 1770, 1837
CfoI	GCGC	1 cut(s)	874
Cfr10I	RCCGGY	1 cut(s)	878
Cfr13I	GGNCC	4 cut(s)	4, 791, 962, 1807
CseI	GACGC	2 cut(s)	178, 1184
Csp6I	GTAC	2 cut(s)	1303, 1664
CviAII	CATG	7 cut(s)	174, 1265, 1306, 1330, 1424, 1836, 1894
CviQI	GTAC	2 cut(s)	1303, 1664
DdeI	CTNAG	7 cut(s)	429, 593, 642, 1083, 1140, 1338, 1764
DpnI	GATC	8 cut(s)	386, 563, 1214, 1458, 1670, 1761, 1790, 1902
DpnII	GATC	8 cut(s)	384, 561, 1212, 1456, 1668, 1759, 1788, 1900
EaeI	YGGCCR	3 cut(s)	876, 966, 1274
EagI	CGGCCG	1 cut(s)	1274
Eam1104I	CTCTTC	5 cut(s)	327, 442, 554, 640, 815
EarI	CTCTTC	5 cut(s)	327, 442, 554, 640, 815
EciI	GGCGGA	1 cut(s)	23
Ecl136II	GAGCTC	1 cut(s)	316
EclXI	CGGCCG	1 cut(s)	1274
Eco130I	CCWWGG	1 cut(s)	683
Eco24I	GRGCYC	1 cut(s)	318
Eco31I	GGTCTC	1 cut(s)	1861
Eco47I	GGWCC	4 cut(s)	4, 791, 962, 1807
Eco47III	AGCGCT	1 cut(s)	873
Eco52I	CGGCCG	1 cut(s)	1274
Eco53kI	GAGCTC	1 cut(s)	316
Eco57I	CTGAAG	4 cut(s)	81, 1368, 1389, 1481
Eco81I	CCTNAGG	1 cut(s)	1140
Eco88I	CYCGRG	3 cut(s)	302, 854, 1658
EcoICRI	GAGCTC	1 cut(s)	316
EcoRII	CCWGG	3 cut(s)	624, 787, 1090
EcoT14I	CCWWGG	1 cut(s)	683
EcoT22I	ATGCAT	1 cut(s)	1185
EcoT38I	GRGCYC	1 cut(s)	318
ErhI	CCWWGG	1 cut(s)	683
FaeI	CATG	7 cut(s)	177, 1268, 1309, 1333, 1427, 1839, 1897
FalI	AAGNNNNNCTT	4 cut(s)	908, 940, 1014, 1046
FaqI	GGGAC	4 cut(s)	241, 335, 1239, 1255
FatI	CATG	7 cut(s)	173, 1264, 1305, 1329, 1423, 1835, 1893
FauI	CCCGC	2 cut(s)	68, 360
FbaI	TGATCA	1 cut(s)	1668
Fnu4HI	GCNGC	5 cut(s)	26, 726, 851, 920, 1149
FokI	GGATG	5 cut(s)	53, 1074, 1175, 1747, 1895
FriOI	GRGCYC	1 cut(s)	318
Fsp4HI	GCNGC	5 cut(s)	26, 726, 851, 920, 1149
FspBI	CTAG	1 cut(s)	240
GlaI	GCGC	1 cut(s)	873
GluI	GCNGC	5 cut(s)	26, 726, 851, 920, 1149
GsaI	CCCAGC	1 cut(s)	569
GsuI	CTGGAG	3 cut(s)	401, 771, 1034
HaeII	RGCGCY	1 cut(s)	875
HaeIII	GGCC	3 cut(s)	878, 968, 1276
HgaI	GACGC	2 cut(s)	178, 1184
HhaI	GCGC	1 cut(s)	874
Hin1I	GRCGYC	2 cut(s)	189, 1751
Hin1II	CATG	7 cut(s)	177, 1268, 1309, 1333, 1427, 1839, 1897
Hin6I	GCGC	1 cut(s)	872
HinP1I	GCGC	1 cut(s)	872
HincII	GTYRAC	3 cut(s)	343, 1335, 1374
HindII	GTYRAC	3 cut(s)	343, 1335, 1374
HinfI	GANTC	7 cut(s)	207, 243, 956, 1243, 1398, 1720, 1778
HpaI	GTTAAC	2 cut(s)	1335, 1374
HphI	GGTGA	3 cut(s)	34, 428, 630
Hpy166II	GTNNAC	7 cut(s)	343, 1067, 1075, 1335, 1374, 1429, 1620
Hpy188III	TCNNGA	5 cut(s)	326, 502, 1013, 1555, 1702
Hpy8I	GTNNAC	7 cut(s)	343, 1067, 1075, 1335, 1374, 1429, 1620
HpyAV	CCTTC	7 cut(s)	55, 105, 113, 435, 623, 805, 1343
HpyCH4III	ACNGT	6 cut(s)	121, 1222, 1283, 1579, 1686, 1849
HpyCH4IV	ACGT	3 cut(s)	225, 1473, 1751
HpyCH4V	TGCA	9 cut(s)	177, 372, 1183, 1391, 1429, 1508, 1592, 1845, 1893
HpyF10VI	GCNNNNNNNGC	6 cut(s)	195, 304, 313, 495, 916, 1505
HpyF3I	CTNAG	7 cut(s)	429, 593, 642, 1083, 1140, 1338, 1764
HpySE526I	ACGT	3 cut(s)	225, 1473, 1751
Hsp92I	GRCGYC	2 cut(s)	189, 1751
Hsp92II	CATG	7 cut(s)	177, 1268, 1309, 1333, 1427, 1839, 1897
HspAI	GCGC	1 cut(s)	872
Kpn2I	TCCGGA	1 cut(s)	325
Ksp22I	TGATCA	1 cut(s)	1668
KspAI	GTTAAC	2 cut(s)	1335, 1374
Kzo9I	GATC	8 cut(s)	384, 561, 1212, 1456, 1668, 1759, 1788, 1900
LguI	GCTCTTC	2 cut(s)	640, 815
LmnI	GCTCC	5 cut(s)	33, 303, 790, 869, 1317
Lsp1109I	GCAGC	4 cut(s)	37, 737, 837, 906
LweI	GCATC	2 cut(s)	1170, 1182
MaeI	CTAG	1 cut(s)	240
MaeII	ACGT	3 cut(s)	225, 1473, 1751
MaeIII	GTNAC	1 cut(s)	1583
MalI	GATC	8 cut(s)	386, 563, 1214, 1458, 1670, 1761, 1790, 1902
MboI	GATC	8 cut(s)	384, 561, 1212, 1456, 1668, 1759, 1788, 1900
MflI	RGATCY	4 cut(s)	384, 561, 1456, 1759
MhlI	GDGCHC	2 cut(s)	318, 1431
MluCI	AATT	7 cut(s)	407, 745, 1200, 1230, 1503, 1694, 1784
MlyI	GAGTC	5 cut(s)	201, 237, 950, 1729, 1772
MmeI	TCCRAC	5 cut(s)	237, 498, 1020, 1188, 1878
Mph1103I	ATGCAT	1 cut(s)	1185
MroI	TCCGGA	1 cut(s)	325
MroXI	GAANNNNTTC	1 cut(s)	1402
MseI	TTAA	6 cut(s)	309, 987, 1119, 1334, 1373, 1728
MspR9I	CCNGG	8 cut(s)	15, 186, 556, 626, 789, 892, 1092, 1273
MvaI	CCWGG	3 cut(s)	626, 789, 1092
MwoI	GCNNNNNNNGC	6 cut(s)	195, 304, 313, 495, 916, 1505
NciI	CCSGG	5 cut(s)	15, 186, 556, 892, 1273
NdeII	GATC	8 cut(s)	384, 561, 1212, 1456, 1668, 1759, 1788, 1900
NlaIII	CATG	7 cut(s)	177, 1268, 1309, 1333, 1427, 1839, 1897
NlaIV	GGNNCC	3 cut(s)	6, 681, 1761
NmeAIII	GCCGAG	1 cut(s)	114
NsiI	ATGCAT	1 cut(s)	1185
NspI	RCATGY	4 cut(s)	1268, 1333, 1839, 1897
PaeI	GCATGC	1 cut(s)	1839
PciI	ACATGT	2 cut(s)	1264, 1329
PciSI	GCTCTTC	2 cut(s)	640, 815
PdmI	GAANNNNTTC	1 cut(s)	1402
PfeI	GAWTC	2 cut(s)	1243, 1398
PflFI	GACNNNGTC	1 cut(s)	347
PfoI	TCCNGGA	2 cut(s)	554, 624
PkrI	GCNGC	5 cut(s)	27, 727, 852, 921, 1150
PleI	GAGTC	5 cut(s)	201, 237, 950, 1728, 1772
PpsI	GAGTC	5 cut(s)	201, 237, 950, 1728, 1772
PscI	ACATGT	2 cut(s)	1264, 1329
PshAI	GACNNNNGTC	1 cut(s)	960
Psp124BI	GAGCTC	1 cut(s)	318
Psp6I	CCWGG	3 cut(s)	624, 787, 1090
PspFI	CCCAGC	1 cut(s)	565
PspGI	CCWGG	3 cut(s)	624, 787, 1090
PspN4I	GGNNCC	3 cut(s)	6, 681, 1761
PspPI	GGNCC	4 cut(s)	4, 791, 962, 1807
PsuI	RGATCY	4 cut(s)	384, 561, 1456, 1759
PsyI	GACNNNGTC	1 cut(s)	347
RsaI	GTAC	2 cut(s)	1304, 1665
RsaNI	GTAC	2 cut(s)	1303, 1664
SacI	GAGCTC	1 cut(s)	318
SapI	GCTCTTC	2 cut(s)	640, 815
SaqAI	TTAA	6 cut(s)	309, 987, 1119, 1334, 1373, 1728
SatI	GCNGC	5 cut(s)	26, 726, 851, 920, 1149
Sau3AI	GATC	8 cut(s)	384, 561, 1212, 1456, 1668, 1759, 1788, 1900
Sau96I	GGNCC	4 cut(s)	4, 791, 962, 1807
SchI	GAGTC	5 cut(s)	201, 237, 950, 1729, 1772
ScrFI	CCNGG	8 cut(s)	15, 186, 556, 626, 789, 892, 1092, 1273
SduI	GDGCHC	2 cut(s)	318, 1431
SfaNI	GCATC	2 cut(s)	1170, 1182
SinI	GGWCC	4 cut(s)	4, 791, 962, 1807
SmlI	CTYRAG	4 cut(s)	493, 756, 780, 1613
SmoI	CTYRAG	4 cut(s)	493, 756, 780, 1613
SphI	GCATGC	1 cut(s)	1839
Sse9I	AATT	7 cut(s)	407, 745, 1200, 1230, 1503, 1694, 1784
SsiI	CCGC	6 cut(s)	23, 34, 75, 353, 723, 1148
SspMI	CTAG	1 cut(s)	240
SstI	GAGCTC	1 cut(s)	318
StyD4I	CCNGG	8 cut(s)	13, 184, 554, 624, 787, 890, 1090, 1271
StyI	CCWWGG	1 cut(s)	683
TaaI	ACNGT	6 cut(s)	121, 1222, 1283, 1579, 1686, 1849
TaiI	ACGT	3 cut(s)	228, 1476, 1754
TaqI	TCGA	6 cut(s)	90, 462, 657, 1234, 1501, 1776
TaqII	GACCGA	1 cut(s)	1194
TasI	AATT	7 cut(s)	407, 745, 1200, 1230, 1503, 1694, 1784
TatI	WGTACW	1 cut(s)	1302
TauI	GCSGC	1 cut(s)	1151
TfiI	GAWTC	2 cut(s)	1243, 1398
Tru1I	TTAA	6 cut(s)	309, 987, 1119, 1334, 1373, 1728
Tru9I	TTAA	6 cut(s)	309, 987, 1119, 1334, 1373, 1728
TscAI	CASTG	2 cut(s)	124, 1854
TseI	GCWGC	4 cut(s)	25, 725, 850, 919
TspDTI	ATGAA	6 cut(s)	682, 886, 1179, 1322, 1707, 1751
TspGWI	ACGGA	1 cut(s)	1175
TspRI	CASTG	2 cut(s)	124, 1854
Tth111I	GACNNNGTC	1 cut(s)	347
VneI	GTGCAC	1 cut(s)	1427
VpaK11BI	GGWCC	4 cut(s)	4, 791, 962, 1807
XapI	RAATTY	3 cut(s)	1200, 1230, 1694
XceI	RCATGY	4 cut(s)	1268, 1333, 1839, 1897
XmnI	GAANNNNTTC	1 cut(s)	1402
XspI	CTAG	1 cut(s)	240
ZraI	GACGTC	1 cut(s)	1752
Zsp2I	ATGCAT	1 cut(s)	1185

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.