Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0008551

Physical Location & Seq

Genomic Coordinates Reverse (-)

9715176 .. 9717092

Gene Structure 1917 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G010410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGGACCCTTTTCCAGGCAAACCGCAGCTCCTCCACCTCCTCACCTTCCTCTCCCTCCTCCTCCTCCTCATCCACGGCGGTAGGCTCAACCTCGACTCTTCAGACCTTCAAGCCCTCATCACTGTCCAAACCCACCTCGGCTTCCACACACCAGACAGAGCCAAACCCACCAACCCATGCAACACCCCCGGCGTCTTCTGCGAGAGAAGACTCTCCAACAACACCTACGTCCTCAAAATCAGTAGACTCGTCTTCAAGTCCCAACTCCTCTCCGGCTCTCTGTCTTCGGCAATCGGACAGCTCTCAGAGCTTAAAGAGCTCTCTCTTTTTGACAACAGCCTCATTGACCGAGTCCCGCCTGAAATAGTTGACTGCAAGAAGCTGGAGATCCTCAACCTCGGAAACAACCAGTTTTCGGGTGAGGTTCCTTCTCAGCTCTCTTCTCTAATCAGGCTTCGAATACTCGACCTCTCCTCCAACAAGTTCTCCGGCAACTTGAGCTTCTTGAAGCATTTTCCCAACTTGGAAAATCTCTCCATTGCCGACAATCTCTTCTCCGGGAAGATCCCAGCTTCGGTTCGTTCTTTTCGTAATCTCAGGTTCTTCAACTTCTCCGGAAATGAGTTCCTGGAAGGCTACGCACCTAAGTTGAAAAGGGTCGAGGTTTCAGCTTCTTCCGAGGTTCCAAGGCGTTTCATTTTTGCTGAAACATCAAACCCCATCAACGCAGCAAAAACCAAAAATAGTAATTCAACCGCTCAAGCACCCTCCGGTTCTAATGCTCACGCTCCAGGTCCATCTCCACTACCGAAGAAGAAGAAGAGCAAGAAGAAGAAAGTCGGAGGCTGGCTGCTCGGCTTCTTCGCCGGAGCGCTGGCCGGGTGCATATCCGGGTTCATCTTCTCTCTGCTGTTCAAGCTGCTCTTGGCTGTAGTTAGAGGAGGTGGAGGCAAGGACTCTGGTCCGGCCATTTTCAGTTCCCTGATTAAGAGAAAAGAAGACTTGGCTTTTCTGGAGAAAGAAGACTGGGATGCTTCGTTGGAGCTCATCGGAAGGGGAGGATGTGGACAGGTTTACAAAGTTGAGTTGCCAGGAAGCAACGGGAAGATAATCGCTATTAAGAAGATTAATCAACCTCCTAAGGAAGCGGCAGAGCTGACGGACGAAGACAGCAAGCAGATGAATAAGAAGATGCGTCAAATTCGGGCGGAGATCAATACCGTGGGACAAATTCGACACCGGAATCTGCTTCCTCTGTTGGCACATGTTTCCCGGTCGGACTGTCATCTGCTGGTGTATGAGTACATGAAAAATGGGAGCTTACATGACATGTTGAATGAGGTTTCTGAAGGGAGAAAGGAATTGGATTGGTTAACAAGGCACAGAATTGCAATAGGAATCGCTTCAGGGCTTGAATATCTCCATGTCCACCATACACCTCACATCATTCACAGGGATCTGAAGCCGGCAAACGTCCTGCTTGATGACGATATGGAAGCTCGAATTGCAGATTTTGGGCTTGCGAAAGCAATGCCTGACTACCACACGCATATGACGTCTTCAAATGTGGCAGGAACGGTTGGTTTCATTGCACCGGAGTATCATCAGACATTCAAGTTCACAGAGAAGTGTGATATTTACAGCTTCGGGGTGTTGCTCGGGGTACTGATCATGGGAAAGCTACCGTCTGATGTATTTTTCCAGACTACCGACGAGATTAGTCTGGTCAAGTGGATGAAGAATGTGCTGACGTCGGAGGATCCTAAGCAGGCTATTGACTCAAAATTGATGGGAAATGGATTTGAGGACCAAATGCTCTTGGTTCTAAAGATAGCATGCTTTTGCACAGTGGATAACCCGAAAGAGAGACCTAGTAGTAAGGATGTTAGGTGCATGTTGGATCAAATCAAGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004713 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010941 GO:0010942 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019538 GO:0031347 GO:0031349 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

638

Amino Acids

70.77

Weight (kDa)

9.09

Isoelectric Point (pI)

34.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	90 - 226	5.9e-08	Leucine-rich repeat region
LRR_At5g56370	PF24758	102 - 225	1.5e-06	FBD-associated F-box protein At5g56370, LRR repeats
LRR_8	PF13855	103 - 162	1.8e-06	Leucine rich repeat
Pkinase	PF00069	347 - 629	1.1e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	348 - 583	2e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31880
fragaria_vesca	FvH4_5g06700
malus_domestica	MD14G1167300.v1.1 MD14G1167400.v1.1
prunus_persica	Prupe.5G161700_v2.0.a1
pyrus_communis	pycom06g14450 pycom14g13960 pycom14g13970
rosa_chinensis	RchiOBHm_Chr7g0191951 RchiOBHm_Chr7g0191971
rosa_laevigata	RLG00000004413 RLG00000004415
rosa_roxburghii	Rroxscaffold_3G00263400 Rroxscaffold_3G00263440
rosa_rugosa	Rorug06G0511800 Rorug06G0511900
rosa_samantha	Rh7AG122200 Rh7AG122300 Rh7BG123900 Rh7CG126400 Rh7CG126600
rosa_wichuraiana	Rw7G010400 Rw7G010410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	1559, 1754
AccBSI	CCGCTC	1 cut(s)	758
AccI	GTMKAC	1 cut(s)	244
AccIII	TCCGGA	1 cut(s)	614
AciI	CCGC	6 cut(s)	23, 78, 356, 756, 1148, 1208
AclWI	GGATC	6 cut(s)	382, 559, 1464, 1754, 1767, 1908
AcoI	YGGCCR	2 cut(s)	876, 966
AcsI	RAATTY	2 cut(s)	1200, 1230
AcuI	CTGAAG	4 cut(s)	84, 1368, 1389, 1481
AcyI	GRCGYC	3 cut(s)	192, 1556, 1751
AfaI	GTAC	2 cut(s)	1304, 1665
AfeI	AGCGCT	1 cut(s)	873
AfiI	CCNNNNNNNGG	3 cut(s)	14, 415, 574
AflIII	ACRYGT	2 cut(s)	1264, 1329
AjnI	CCWGG	4 cut(s)	13, 627, 790, 1090
Alw21I	GWGCWC	2 cut(s)	321, 1047
Alw26I	GTCTC	1 cut(s)	1861
AlwI	GGATC	6 cut(s)	382, 559, 1464, 1754, 1767, 1908
Ama87I	CYCGRG	1 cut(s)	1658
Aor13HI	TCCGGA	1 cut(s)	614
Aor51HI	AGCGCT	1 cut(s)	873
AoxI	GGCC	2 cut(s)	876, 966
ApeKI	GCWGC	4 cut(s)	25, 728, 850, 919
ApoI	RAATTY	2 cut(s)	1200, 1230
AseI	ATTAAT	1 cut(s)	1128
Asp700I	GAANNNNTTC	1 cut(s)	1402
AspLEI	GCGC	1 cut(s)	874
AspS9I	GGNCC	4 cut(s)	4, 794, 962, 1807
AsuC2I	CCSGG	5 cut(s)	189, 559, 880, 892, 1273
AsuHPI	GGTGA	2 cut(s)	34, 431
AsuII	TTCGAA	1 cut(s)	457
AvaI	CYCGRG	1 cut(s)	1658
AvaII	GGWCC	4 cut(s)	4, 794, 962, 1807
AxyI	CCTNAGG	1 cut(s)	1140
BaeI	ACNNNNGTAYC	2 cut(s)	1583, 1616
BamHI	GGATCC	1 cut(s)	1759
BanII	GRGCYC	2 cut(s)	321, 1047
BbsI	GAAGAC	8 cut(s)	187, 214, 244, 276, 1005, 1029, 1173, 1551
Bbv12I	GWGCWC	2 cut(s)	321, 1047
BbvI	GCAGC	4 cut(s)	37, 740, 837, 906
BccI	CCATC	3 cut(s)	728, 805, 1783
BceAI	ACGGC	1 cut(s)	91
BcgI	CGANNNNNNTGC	2 cut(s)	1513, 1547
BciT130I	CCWGG	4 cut(s)	15, 629, 792, 1092
BclI	TGATCA	1 cut(s)	1668
BcnI	CCSGG	5 cut(s)	189, 559, 880, 892, 1273
BcoDI	GTCTC	1 cut(s)	1861
BfaI	CTAG	1 cut(s)	1872
BfmI	CTRYAG	1 cut(s)	930
BfoI	RGCGCY	1 cut(s)	875
BisI	GCNGC	5 cut(s)	26, 729, 851, 920, 1149
BlsI	GCNGC	5 cut(s)	27, 730, 852, 921, 1150
Bme1390I	CCNGG	9 cut(s)	15, 189, 559, 629, 792, 880, 892, 1092, 1273
Bme18I	GGWCC	4 cut(s)	4, 794, 962, 1807
BmeT110I	CYCGRG	1 cut(s)	1658
BmgT120I	GGNCC	4 cut(s)	4, 794, 962, 1807
BmiI	GGNNCC	4 cut(s)	6, 426, 684, 1761
BmrFI	CCNGG	9 cut(s)	15, 189, 559, 629, 792, 880, 892, 1092, 1273
BmrI	ACTGGG	1 cut(s)	1036
BmsI	GCATC	2 cut(s)	1021, 1182
BmuI	ACTGGG	1 cut(s)	1036
BoxI	GACNNNNGTC	1 cut(s)	960
BpiI	GAAGAC	8 cut(s)	187, 214, 244, 276, 1005, 1029, 1173, 1551
BpmI	CTGGAG	3 cut(s)	404, 774, 1034
Bpu10I	CCTNAGC	1 cut(s)	1764
Bpu14I	TTCGAA	1 cut(s)	457
BpuEI	CTTGAG	2 cut(s)	517, 744
BpuMI	CCSGG	5 cut(s)	189, 559, 880, 892, 1273
BsaHI	GRCGYC	3 cut(s)	192, 1556, 1751
BsaI	GGTCTC	1 cut(s)	1861
BsaJI	CCNNGG	7 cut(s)	73, 136, 187, 397, 678, 686, 1221
BsaWI	WCCGGW	4 cut(s)	614, 770, 1239, 1594
BsaXI	ACNNNNNCTCC	6 cut(s)	12, 42, 458, 470, 488, 500
Bsc4I	CCNNNNNNNGG	3 cut(s)	14, 415, 574
Bse118I	RCCGGY	1 cut(s)	1465
Bse1I	ACTGG	2 cut(s)	409, 1031
Bse21I	CCTNAGG	1 cut(s)	1140
Bse3DI	GCAATG	3 cut(s)	537, 1536, 1587
BseAI	TCCGGA	1 cut(s)	614
BseBI	CCWGG	4 cut(s)	15, 629, 792, 1092
BseDI	CCNNGG	7 cut(s)	73, 136, 187, 397, 678, 686, 1221
BseGI	GGATG	5 cut(s)	69, 1036, 1067, 1740, 1888
BseLI	CCNNNNNNNGG	3 cut(s)	14, 415, 574
BseMI	GCAATG	3 cut(s)	537, 1536, 1587
BseMII	CTCAG	3 cut(s)	318, 446, 610
BseNI	ACTGG	2 cut(s)	409, 1031
BseRI	GAGGAG	9 cut(s)	20, 29, 47, 50, 53, 56, 257, 463, 954
BseXI	GCAGC	4 cut(s)	37, 740, 837, 906
BseYI	CCCAGC	1 cut(s)	568
Bsh1285I	CGRYCG	1 cut(s)	1277
BshFI	GGCC	2 cut(s)	878, 968
BsiEI	CGRYCG	1 cut(s)	1277
BsiHKAI	GWGCWC	2 cut(s)	321, 1047
BsiHKCI	CYCGRG	1 cut(s)	1658
BslFI	GGGAC	3 cut(s)	244, 338, 1239
BslI	CCNNNNNNNGG	3 cut(s)	14, 415, 574
BsmAI	GTCTC	1 cut(s)	1861
BsmFI	GGGAC	3 cut(s)	244, 338, 1239
BsnI	GGCC	2 cut(s)	878, 968
Bso31I	GGTCTC	1 cut(s)	1861
BsoBI	CYCGRG	1 cut(s)	1658
Bsp119I	TTCGAA	1 cut(s)	457
Bsp1286I	GDGCHC	2 cut(s)	321, 1047
Bsp13I	TCCGGA	1 cut(s)	614
Bsp143I	GATC	7 cut(s)	387, 564, 1212, 1456, 1668, 1759, 1900
BspACI	CCGC	6 cut(s)	23, 78, 356, 756, 1148, 1208
BspANI	GGCC	2 cut(s)	878, 968
BspCNI	CTCAG	3 cut(s)	317, 445, 609
BspEI	TCCGGA	1 cut(s)	614
BspLI	GGNNCC	4 cut(s)	6, 426, 684, 1761
BspPI	GGATC	6 cut(s)	382, 559, 1464, 1754, 1767, 1908
BspQI	GCTCTTC	1 cut(s)	815
BspT104I	TTCGAA	1 cut(s)	457
BspTNI	GGTCTC	1 cut(s)	1861
BsrBI	CCGCTC	1 cut(s)	758
BsrDI	GCAATG	3 cut(s)	537, 1536, 1587
BsrFI	RCCGGY	1 cut(s)	1465
BsrI	ACTGG	2 cut(s)	409, 1031
BssAI	RCCGGY	1 cut(s)	1465
BssECI	CCNNGG	7 cut(s)	73, 136, 187, 397, 678, 686, 1221
BssMI	GATC	7 cut(s)	387, 564, 1212, 1456, 1668, 1759, 1900
BssNI	GRCGYC	3 cut(s)	192, 1556, 1751
BssT1I	CCWWGG	1 cut(s)	686
Bst2UI	CCWGG	4 cut(s)	15, 629, 792, 1092
Bst4CI	ACNGT	6 cut(s)	124, 1222, 1283, 1579, 1686, 1849
Bst6I	CTCTTC	4 cut(s)	103, 445, 557, 815
BstACI	GRCGYC	3 cut(s)	192, 1556, 1751
BstBI	TTCGAA	1 cut(s)	457
BstC8I	GCNNGC	7 cut(s)	848, 876, 1175, 1467, 1521, 1770, 1837
BstDEI	CTNAG	6 cut(s)	304, 432, 596, 645, 1140, 1764
BstDSI	CCRYGG	2 cut(s)	73, 1221
BstENI	CCTNNNNNAGG	1 cut(s)	12
BstF5I	GGATG	5 cut(s)	69, 1036, 1067, 1740, 1888
BstH2I	RGCGCY	1 cut(s)	875
BstHHI	GCGC	1 cut(s)	874
BstKTI	GATC	7 cut(s)	390, 567, 1215, 1459, 1671, 1762, 1903
BstMAI	GTCTC	1 cut(s)	1861
BstMBI	GATC	7 cut(s)	387, 564, 1212, 1456, 1668, 1759, 1900
BstMCI	CGRYCG	1 cut(s)	1277
BstMWI	GCNNNNNNNGC	6 cut(s)	198, 307, 316, 498, 916, 1505
BstNI	CCWGG	4 cut(s)	15, 629, 792, 1092
BstNSI	RCATGY	4 cut(s)	1268, 1333, 1839, 1897
BstPAI	GACNNNNGTC	1 cut(s)	960
BstSCI	CCNGG	9 cut(s)	13, 187, 557, 627, 790, 878, 890, 1090, 1271
BstSFI	CTRYAG	1 cut(s)	930
BstV1I	GCAGC	4 cut(s)	37, 740, 837, 906
BstV2I	GAAGAC	8 cut(s)	187, 214, 244, 276, 1005, 1029, 1173, 1551
BstX2I	RGATCY	4 cut(s)	387, 564, 1456, 1759
BstYI	RGATCY	4 cut(s)	387, 564, 1456, 1759
Bsu36I	CCTNAGG	1 cut(s)	1140
BsuRI	GGCC	2 cut(s)	878, 968
BtgI	CCRYGG	2 cut(s)	73, 1221
BtsCI	GGATG	5 cut(s)	69, 1036, 1067, 1740, 1888
BtsIMutI	CAGTG	2 cut(s)	120, 1854
Cac8I	GCNNGC	7 cut(s)	848, 876, 1175, 1467, 1521, 1770, 1837
CfoI	GCGC	1 cut(s)	874
Cfr10I	RCCGGY	1 cut(s)	1465
Cfr13I	GGNCC	4 cut(s)	4, 794, 962, 1807
CseI	GACGC	2 cut(s)	181, 1184
Csp6I	GTAC	2 cut(s)	1303, 1664
CviAII	CATG	9 cut(s)	177, 1265, 1306, 1325, 1330, 1424, 1672, 1836, 1894
CviQI	GTAC	2 cut(s)	1303, 1664
DdeI	CTNAG	6 cut(s)	304, 432, 596, 645, 1140, 1764
DpnI	GATC	7 cut(s)	389, 566, 1214, 1458, 1670, 1761, 1902
DpnII	GATC	7 cut(s)	387, 564, 1212, 1456, 1668, 1759, 1900
EaeI	YGGCCR	2 cut(s)	876, 966
Eam1104I	CTCTTC	4 cut(s)	103, 445, 557, 815
EarI	CTCTTC	4 cut(s)	103, 445, 557, 815
EciI	GGCGGA	1 cut(s)	1223
Ecl136II	GAGCTC	2 cut(s)	319, 1045
Eco130I	CCWWGG	1 cut(s)	686
Eco24I	GRGCYC	2 cut(s)	321, 1047
Eco31I	GGTCTC	1 cut(s)	1861
Eco47I	GGWCC	4 cut(s)	4, 794, 962, 1807
Eco47III	AGCGCT	1 cut(s)	873
Eco53kI	GAGCTC	2 cut(s)	319, 1045
Eco57I	CTGAAG	4 cut(s)	84, 1368, 1389, 1481
Eco81I	CCTNAGG	1 cut(s)	1140
Eco88I	CYCGRG	1 cut(s)	1658
EcoICRI	GAGCTC	2 cut(s)	319, 1045
EcoNI	CCTNNNNNAGG	1 cut(s)	12
EcoRII	CCWGG	4 cut(s)	13, 627, 790, 1090
EcoT14I	CCWWGG	1 cut(s)	686
EcoT38I	GRGCYC	2 cut(s)	321, 1047
ErhI	CCWWGG	1 cut(s)	686
FaeI	CATG	9 cut(s)	180, 1268, 1309, 1328, 1333, 1427, 1675, 1839, 1897
FalI	AAGNNNNNCTT	2 cut(s)	908, 940
FaqI	GGGAC	3 cut(s)	244, 338, 1239
FatI	CATG	9 cut(s)	176, 1264, 1305, 1324, 1329, 1423, 1671, 1835, 1893
FauI	CCCGC	1 cut(s)	363
FauNDI	CATATG	1 cut(s)	1551
FbaI	TGATCA	1 cut(s)	1668
FblI	GTMKAC	1 cut(s)	244
Fnu4HI	GCNGC	5 cut(s)	26, 729, 851, 920, 1149
FokI	GGATG	5 cut(s)	56, 1043, 1074, 1747, 1895
FriOI	GRGCYC	2 cut(s)	321, 1047
Fsp4HI	GCNGC	5 cut(s)	26, 729, 851, 920, 1149
FspBI	CTAG	1 cut(s)	1872
GlaI	GCGC	1 cut(s)	873
GluI	GCNGC	5 cut(s)	26, 729, 851, 920, 1149
GsaI	CCCAGC	1 cut(s)	572
GsuI	CTGGAG	3 cut(s)	404, 774, 1034
HaeII	RGCGCY	1 cut(s)	875
HaeIII	GGCC	2 cut(s)	878, 968
HgaI	GACGC	2 cut(s)	181, 1184
HhaI	GCGC	1 cut(s)	874
Hin1I	GRCGYC	3 cut(s)	192, 1556, 1751
Hin1II	CATG	9 cut(s)	180, 1268, 1309, 1328, 1333, 1427, 1675, 1839, 1897
Hin6I	GCGC	1 cut(s)	872
HinP1I	GCGC	1 cut(s)	872
HincII	GTYRAC	2 cut(s)	370, 1374
HindII	GTYRAC	2 cut(s)	370, 1374
HinfI	GANTC	8 cut(s)	95, 210, 246, 351, 956, 1243, 1398, 1778
HpaI	GTTAAC	1 cut(s)	1374
HphI	GGTGA	2 cut(s)	34, 431
Hpy166II	GTNNAC	7 cut(s)	245, 370, 1067, 1075, 1374, 1429, 1620
Hpy188III	TCNNGA	4 cut(s)	505, 615, 1013, 1702
Hpy8I	GTNNAC	7 cut(s)	245, 370, 1067, 1075, 1374, 1429, 1620
Hpy99I	CGWCG	2 cut(s)	1715, 1756
HpyAV	CCTTC	6 cut(s)	55, 116, 438, 626, 1047, 1343
HpyCH4III	ACNGT	6 cut(s)	124, 1222, 1283, 1579, 1686, 1849
HpyCH4IV	ACGT	4 cut(s)	228, 1473, 1556, 1751
HpyCH4V	TGCA	8 cut(s)	180, 375, 885, 1391, 1508, 1592, 1845, 1893
HpyF10VI	GCNNNNNNNGC	6 cut(s)	198, 307, 316, 498, 916, 1505
HpyF3I	CTNAG	6 cut(s)	304, 432, 596, 645, 1140, 1764
HpySE526I	ACGT	4 cut(s)	228, 1473, 1556, 1751
Hsp92I	GRCGYC	3 cut(s)	192, 1556, 1751
Hsp92II	CATG	9 cut(s)	180, 1268, 1309, 1328, 1333, 1427, 1675, 1839, 1897
HspAI	GCGC	1 cut(s)	872
Kpn2I	TCCGGA	1 cut(s)	614
KroI	GCCGGC	1 cut(s)	1465
KroNI	GCCGGC	1 cut(s)	1467
Ksp22I	TGATCA	1 cut(s)	1668
KspAI	GTTAAC	1 cut(s)	1374
Kzo9I	GATC	7 cut(s)	387, 564, 1212, 1456, 1668, 1759, 1900
LguI	GCTCTTC	1 cut(s)	815
LmnI	GCTCC	5 cut(s)	33, 793, 869, 1042, 1317
Lsp1109I	GCAGC	4 cut(s)	37, 740, 837, 906
LweI	GCATC	2 cut(s)	1021, 1182
MaeI	CTAG	1 cut(s)	1872
MaeII	ACGT	4 cut(s)	228, 1473, 1556, 1751
MalI	GATC	7 cut(s)	389, 566, 1214, 1458, 1670, 1761, 1902
MbiI	CCGCTC	1 cut(s)	758
MboI	GATC	7 cut(s)	387, 564, 1212, 1456, 1668, 1759, 1900
MflI	RGATCY	4 cut(s)	387, 564, 1456, 1759
MhlI	GDGCHC	2 cut(s)	321, 1047
MluCI	AATT	7 cut(s)	748, 1200, 1230, 1361, 1386, 1503, 1784
MlyI	GAGTC	6 cut(s)	89, 204, 240, 360, 950, 1772
MmeI	TCCRAC	7 cut(s)	240, 501, 820, 1020, 1257, 1734, 1878
MroI	TCCGGA	1 cut(s)	614
MroNI	GCCGGC	1 cut(s)	1465
MroXI	GAANNNNTTC	1 cut(s)	1402
MseI	TTAA	6 cut(s)	312, 987, 1119, 1128, 1373, 1915
MslI	CAYNNNNRTG	1 cut(s)	1550
MspR9I	CCNGG	9 cut(s)	15, 189, 559, 629, 792, 880, 892, 1092, 1273
MvaI	CCWGG	4 cut(s)	15, 629, 792, 1092
MwoI	GCNNNNNNNGC	6 cut(s)	198, 307, 316, 498, 916, 1505
NaeI	GCCGGC	1 cut(s)	1467
NciI	CCSGG	5 cut(s)	189, 559, 880, 892, 1273
NdeI	CATATG	1 cut(s)	1551
NdeII	GATC	7 cut(s)	387, 564, 1212, 1456, 1668, 1759, 1900
NgoMIV	GCCGGC	1 cut(s)	1465
NlaIII	CATG	9 cut(s)	180, 1268, 1309, 1328, 1333, 1427, 1675, 1839, 1897
NlaIV	GGNNCC	4 cut(s)	6, 426, 684, 1761
NmeAIII	GCCGAG	2 cut(s)	117, 834
NspI	RCATGY	4 cut(s)	1268, 1333, 1839, 1897
NspV	TTCGAA	1 cut(s)	457
PaeI	GCATGC	1 cut(s)	1839
PciI	ACATGT	2 cut(s)	1264, 1329
PciSI	GCTCTTC	1 cut(s)	815
PcsI	WCGNNNNNNNCGW	2 cut(s)	586, 1553
PdiI	GCCGGC	1 cut(s)	1467
PdmI	GAANNNNTTC	1 cut(s)	1402
PfeI	GAWTC	2 cut(s)	1243, 1398
PflFI	GACNNNGTC	1 cut(s)	350
PfoI	TCCNGGA	2 cut(s)	557, 627
PkrI	GCNGC	5 cut(s)	27, 730, 852, 921, 1150
PleI	GAGTC	6 cut(s)	89, 204, 240, 359, 950, 1772
PpsI	GAGTC	6 cut(s)	89, 204, 240, 359, 950, 1772
PscI	ACATGT	2 cut(s)	1264, 1329
PshAI	GACNNNNGTC	1 cut(s)	960
PshBI	ATTAAT	1 cut(s)	1128
Psp124BI	GAGCTC	2 cut(s)	321, 1047
Psp6I	CCWGG	4 cut(s)	13, 627, 790, 1090
PspFI	CCCAGC	1 cut(s)	568
PspGI	CCWGG	4 cut(s)	13, 627, 790, 1090
PspN4I	GGNNCC	4 cut(s)	6, 426, 684, 1761
PspPI	GGNCC	4 cut(s)	4, 794, 962, 1807
PsuI	RGATCY	4 cut(s)	387, 564, 1456, 1759
PsyI	GACNNNGTC	1 cut(s)	350
RsaI	GTAC	2 cut(s)	1304, 1665
RsaNI	GTAC	2 cut(s)	1303, 1664
RseI	CAYNNNNRTG	1 cut(s)	1550
SacI	GAGCTC	2 cut(s)	321, 1047
SapI	GCTCTTC	1 cut(s)	815
SaqAI	TTAA	6 cut(s)	312, 987, 1119, 1128, 1373, 1915
SatI	GCNGC	5 cut(s)	26, 729, 851, 920, 1149
Sau3AI	GATC	7 cut(s)	387, 564, 1212, 1456, 1668, 1759, 1900
Sau96I	GGNCC	4 cut(s)	4, 794, 962, 1807
SchI	GAGTC	6 cut(s)	89, 204, 240, 360, 950, 1772
ScrFI	CCNGG	9 cut(s)	15, 189, 559, 629, 792, 880, 892, 1092, 1273
SduI	GDGCHC	2 cut(s)	321, 1047
SfaNI	GCATC	2 cut(s)	1021, 1182
SfcI	CTRYAG	1 cut(s)	930
SfuI	TTCGAA	1 cut(s)	457
SinI	GGWCC	4 cut(s)	4, 794, 962, 1807
SmiMI	CAYNNNNRTG	1 cut(s)	1550
SmlI	CTYRAG	2 cut(s)	496, 759
SmoI	CTYRAG	2 cut(s)	496, 759
SphI	GCATGC	1 cut(s)	1839
Sse9I	AATT	7 cut(s)	748, 1200, 1230, 1361, 1386, 1503, 1784
SsiI	CCGC	6 cut(s)	23, 78, 356, 756, 1148, 1208
SspMI	CTAG	1 cut(s)	1872
SstI	GAGCTC	2 cut(s)	321, 1047
StyD4I	CCNGG	9 cut(s)	13, 187, 557, 627, 790, 878, 890, 1090, 1271
StyI	CCWWGG	1 cut(s)	686
TaaI	ACNGT	6 cut(s)	124, 1222, 1283, 1579, 1686, 1849
TaiI	ACGT	4 cut(s)	231, 1476, 1559, 1754
TaqI	TCGA	6 cut(s)	93, 457, 465, 660, 1234, 1501
TaqII	GACCGA	1 cut(s)	363
TasI	AATT	7 cut(s)	748, 1200, 1230, 1361, 1386, 1503, 1784
TatI	WGTACW	1 cut(s)	1302
TauI	GCSGC	1 cut(s)	1151
TfiI	GAWTC	2 cut(s)	1243, 1398
Tru1I	TTAA	6 cut(s)	312, 987, 1119, 1128, 1373, 1915
Tru9I	TTAA	6 cut(s)	312, 987, 1119, 1128, 1373, 1915
TscAI	CASTG	2 cut(s)	127, 1854
TseI	GCWGC	4 cut(s)	25, 728, 850, 919
TspDTI	ATGAA	6 cut(s)	685, 886, 1196, 1322, 1576, 1751
TspGWI	ACGGA	1 cut(s)	1175
TspRI	CASTG	2 cut(s)	127, 1854
Tth111I	GACNNNGTC	1 cut(s)	350
VpaK11BI	GGWCC	4 cut(s)	4, 794, 962, 1807
VspI	ATTAAT	1 cut(s)	1128
XagI	CCTNNNNNAGG	1 cut(s)	12
XapI	RAATTY	2 cut(s)	1200, 1230
XceI	RCATGY	4 cut(s)	1268, 1333, 1839, 1897
XmiI	GTMKAC	1 cut(s)	244
XmnI	GAANNNNTTC	1 cut(s)	1402
XspI	CTAG	1 cut(s)	1872
ZraI	GACGTC	2 cut(s)	1557, 1752

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.