Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0008551

Physical Location & Seq

Genomic Coordinates Reverse (-)

9579869 .. 9581965

Gene Structure 2097 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG122200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGGACCCTTTTCCCGGCAAACCGCAGCTCCTCCGCCTCCTCACCTTCCTCTCACTCCTCCTCCTCATCCACGGCGGTAGGCTCAACCTCGACCCTTCAGACCTTCAAGCCCTCATCACTGTCCAAACCCAACTCGGCTTCCACACCCCAAACAGAGCCAAATCCACCAACCCATGCAACACTCCCGGCGTCTTCTGCGAGAGAAGACTCTCCAACAACACCTACGTCCTCAAAATCACCAGACTCGTCTTCAAGTCCCACCTCCTCTCCGGCTCTCTGTCTCCGGCAATCGGACAGCTCTCCGAGCTCAAAGAGCTCTCTCTTCCGGACAACAGCCTCGTTGACCGAGTCCCGCCCGAAATCGTTGACTGCAAGAAGCTGGAGATCCTCAACCTCGGAAACAACCAGTTTTCGGGTGAAGTTCCTTCTCAGCTCTCTTCTCTAATCAGGCTTCGAATACTCGACCTCTCCTCCAACAAGTTCTCCGGCAACTTGAGCTTCTTGAAGCATTTTCCCAACTTGGAAAATCTCTCCATTGCCGACAATCTCTTCTCCGGGAAGATCCCAGCTTCGGTTCGTTCTTTTCGCAATCTCAGGTTCTTCAACTTCGCCGGAAATGAGTTCCTGGAAGGCTCCGCACCTAAGTTGAAAAAGGTCGAGGTTTCAGCTTCTTCCGAGGTTCCAAGGCGTTTCATTTTTGCTGAAACATCAAACACCACCACCGCAGCAAAAACCAACCATAGTAATTCAATCGCTCAACCACCCTCCGGTTCTAATGCTCAAGCTCCAGGTCCATCTCCACCACCGAAGAAGAAGAAGAAGAGCAAGAAGAAGAAAGTCGGAGGCTGGCTGCTCGGGTTCTTCGCCGGAGCGCTGGCCGGGAGCATATCCGGGTTCATCTTCTCTCTGCTGTTCAAGCTGCTCTTGGCTGTGGTTAGAGGTGGAGGCAAGGAGTCTGGTCCGGCCATTTTCAGTTCTCTGATTAAGAGAAAAGAGGACTTGGCTTTTCTAGAGAAAGAAGACGGGCTTGCTTCGTTGGAGCTCATCGGAAGTGGAGGATGTGGACAGGTTTACAAAGCTGAGTTGCCAGGAAGCAACGGGAAGATAATCGCTATTAAGAAGATTATTCAACCTCCTAAGGAAGCGGCAGAGCTGACGGACGAAGACAGCAAGCAGATGCATAAGAAGATGCGTCAAATTCGGTCGGAGATCAATACCGTGGGACAAATTCGACACCGGAATCTGCTTCCTCTGTTGGCACATGTGTCCCGGCCGGACTGTCATCTGCTGGTGTATGAGTACATGAAAAATGGGAGCTTACAAGACATGTTGATTGAGGTTTCTGAAGGGAGAAAGGAACTGGATTGGTTAACAAGGCACAGGATTGCAATAGGAATCGCTTCAGGGCTTGAATATCTCCATGTGCACCATACACCTCACATCATTCACAGGGATCTGAAGCCGGCAAACGTCCTGCTTGATGACGATATGGAAGCTCGAATTGCAGATTTTGGGCTTGCGAAAGCAATGCCTGACTACCAGACGCATATCACGACTTCAAATGTGGCAGGAACGGTTGGTTACATTGCACCGGAGTATCATCAGACACTCAAGTTCACAGACAAGTGTGATATATACAGCTTCGGGGTATTGCTCGGGGTACTGATCATAGGAAAGCTACCGTCCGATGAATTTTTCCAGACCACCAGCGAGATGAGTCTGGTTAAGTGGATGAAGAATGTTCTGACGTCGGAGGATCCTAAGCAGGCAATCGACTCAAAATTGATGGGAAATGGATTTGAGGACCAAATGCTCTTGGTTCTAAAGATAGCATGCTTTTGCACAGTGGATAACCCGAAAGAGAGACCTAATAGTAAGGATGTTAGGTGCATGTTGGATCAAATCAAGCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004713 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010941 GO:0010942 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019538 GO:0031347 GO:0031349 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

637

Amino Acids

70.37

Weight (kDa)

9.21

Isoelectric Point (pI)

36.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	102 - 161	7.5e-07	Leucine rich repeat
Pkinase	PF00069	346 - 626	1.3e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	346 - 584	2.1e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31880
fragaria_vesca	FvH4_5g06700
malus_domestica	MD14G1167300.v1.1 MD14G1167400.v1.1
prunus_persica	Prupe.5G161700_v2.0.a1
pyrus_communis	pycom06g14450 pycom14g13960 pycom14g13970
rosa_chinensis	RchiOBHm_Chr7g0191951 RchiOBHm_Chr7g0191971
rosa_laevigata	RLG00000004413 RLG00000004415
rosa_roxburghii	Rroxscaffold_3G00263400 Rroxscaffold_3G00263440
rosa_rugosa	Rorug06G0511800 Rorug06G0511900
rosa_samantha	Rh7AG122200 Rh7AG122300 Rh7BG123900 Rh7CG126400 Rh7CG126600
rosa_wichuraiana	Rw7G010400 Rw7G010410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1751
AccIII	TCCGGA	1 cut(s)	325
AciI	CCGC	7 cut(s)	23, 34, 75, 353, 636, 723, 1145
AclWI	GGATC	6 cut(s)	379, 556, 1461, 1751, 1764, 1905
AcoI	YGGCCR	3 cut(s)	876, 963, 1271
AcsI	RAATTY	3 cut(s)	1197, 1227, 1691
AcuI	CTGAAG	4 cut(s)	81, 1365, 1386, 1478
AcyI	GRCGYC	2 cut(s)	189, 1748
AfaI	GTAC	2 cut(s)	1301, 1662
AfeI	AGCGCT	1 cut(s)	873
AfiI	CCNNNNNNNGG	5 cut(s)	14, 290, 412, 571, 767
AflIII	ACRYGT	2 cut(s)	1261, 1326
AjnI	CCWGG	3 cut(s)	624, 787, 1087
Alw21I	GWGCWC	4 cut(s)	309, 318, 1044, 1428
Alw26I	GTCTC	2 cut(s)	285, 1858
Alw44I	GTGCAC	1 cut(s)	1424
AlwI	GGATC	6 cut(s)	379, 556, 1461, 1751, 1764, 1905
Ama87I	CYCGRG	2 cut(s)	854, 1655
Aor13HI	TCCGGA	1 cut(s)	325
Aor51HI	AGCGCT	1 cut(s)	873
AoxI	GGCC	3 cut(s)	876, 963, 1271
ApaLI	GTGCAC	1 cut(s)	1424
ApeKI	GCWGC	4 cut(s)	25, 725, 850, 919
ApoI	RAATTY	3 cut(s)	1197, 1227, 1691
Asp700I	GAANNNNTTC	1 cut(s)	1399
AspLEI	GCGC	1 cut(s)	874
AspS9I	GGNCC	4 cut(s)	4, 791, 959, 1804
AsuC2I	CCSGG	6 cut(s)	15, 186, 556, 880, 892, 1270
AsuHPI	GGTGA	3 cut(s)	34, 229, 428
AsuII	TTCGAA	1 cut(s)	454
AvaI	CYCGRG	2 cut(s)	854, 1655
AvaII	GGWCC	4 cut(s)	4, 791, 959, 1804
AxyI	CCTNAGG	1 cut(s)	1137
BaeGI	GKGCMC	1 cut(s)	1428
BaeI	ACNNNNGTAYC	2 cut(s)	1580, 1613
BamHI	GGATCC	1 cut(s)	1756
BanII	GRGCYC	3 cut(s)	309, 318, 1044
BbsI	GAAGAC	5 cut(s)	184, 211, 241, 1026, 1170
Bbv12I	GWGCWC	4 cut(s)	309, 318, 1044, 1428
BbvI	GCAGC	4 cut(s)	37, 737, 837, 906
BccI	CCATC	2 cut(s)	802, 1780
BceAI	ACGGC	1 cut(s)	88
BcgI	CGANNNNNNTGC	2 cut(s)	1510, 1544
BciT130I	CCWGG	3 cut(s)	626, 789, 1089
BclI	TGATCA	1 cut(s)	1665
BcnI	CCSGG	6 cut(s)	15, 186, 556, 880, 892, 1270
BcoDI	GTCTC	2 cut(s)	285, 1858
BfaI	CTAG	1 cut(s)	1010
BfoI	RGCGCY	1 cut(s)	875
BisI	GCNGC	5 cut(s)	26, 726, 851, 920, 1146
BlsI	GCNGC	5 cut(s)	27, 727, 852, 921, 1147
Bme1390I	CCNGG	9 cut(s)	15, 186, 556, 626, 789, 880, 892, 1089, 1270
Bme18I	GGWCC	4 cut(s)	4, 791, 959, 1804
BmeT110I	CYCGRG	2 cut(s)	854, 1655
BmgT120I	GGNCC	4 cut(s)	4, 791, 959, 1804
BmiI	GGNNCC	4 cut(s)	6, 634, 681, 1758
BmrFI	CCNGG	9 cut(s)	15, 186, 556, 626, 789, 880, 892, 1089, 1270
BmsI	GCATC	2 cut(s)	1167, 1179
BpiI	GAAGAC	5 cut(s)	184, 211, 241, 1026, 1170
BpmI	CTGGAG	2 cut(s)	401, 771
Bpu10I	CCTNAGC	1 cut(s)	1761
Bpu14I	TTCGAA	1 cut(s)	454
BpuEI	CTTGAG	3 cut(s)	514, 765, 1595
BpuMI	CCSGG	6 cut(s)	15, 186, 556, 880, 892, 1270
BsaHI	GRCGYC	2 cut(s)	189, 1748
BsaI	GGTCTC	1 cut(s)	1858
BsaJI	CCNNGG	5 cut(s)	70, 394, 675, 683, 1218
BsaWI	WCCGGW	4 cut(s)	325, 767, 1236, 1591
Bsc4I	CCNNNNNNNGG	5 cut(s)	14, 290, 412, 571, 767
Bse118I	RCCGGY	1 cut(s)	1462
Bse1I	ACTGG	2 cut(s)	406, 1365
Bse21I	CCTNAGG	1 cut(s)	1137
Bse3DI	GCAATG	3 cut(s)	534, 1533, 1584
BseAI	TCCGGA	1 cut(s)	325
BseBI	CCWGG	3 cut(s)	626, 789, 1089
BseDI	CCNNGG	5 cut(s)	70, 394, 675, 683, 1218
BseGI	GGATG	4 cut(s)	66, 1064, 1737, 1885
BseLI	CCNNNNNNNGG	5 cut(s)	14, 290, 412, 571, 767
BseMI	GCAATG	3 cut(s)	534, 1533, 1584
BseMII	CTCAG	3 cut(s)	443, 607, 1071
BseNI	ACTGG	2 cut(s)	406, 1365
BseRI	GAGGAG	7 cut(s)	20, 29, 47, 50, 53, 254, 460
BseSI	GKGCMC	1 cut(s)	1428
BseX3I	CGGCCG	1 cut(s)	1271
BseXI	GCAGC	4 cut(s)	37, 737, 837, 906
BseYI	CCCAGC	1 cut(s)	565
Bsh1285I	CGRYCG	2 cut(s)	1205, 1274
BshFI	GGCC	3 cut(s)	878, 965, 1273
BsiEI	CGRYCG	2 cut(s)	1205, 1274
BsiHKAI	GWGCWC	4 cut(s)	309, 318, 1044, 1428
BsiHKCI	CYCGRG	2 cut(s)	854, 1655
BslFI	GGGAC	4 cut(s)	241, 335, 1236, 1252
BslI	CCNNNNNNNGG	5 cut(s)	14, 290, 412, 571, 767
BsmAI	GTCTC	2 cut(s)	285, 1858
BsmFI	GGGAC	4 cut(s)	241, 335, 1236, 1252
BsnI	GGCC	3 cut(s)	878, 965, 1273
Bso31I	GGTCTC	1 cut(s)	1858
BsoBI	CYCGRG	2 cut(s)	854, 1655
Bsp119I	TTCGAA	1 cut(s)	454
Bsp1286I	GDGCHC	4 cut(s)	309, 318, 1044, 1428
Bsp13I	TCCGGA	1 cut(s)	325
Bsp143I	GATC	7 cut(s)	384, 561, 1209, 1453, 1665, 1756, 1897
BspACI	CCGC	7 cut(s)	23, 34, 75, 353, 636, 723, 1145
BspANI	GGCC	3 cut(s)	878, 965, 1273
BspCNI	CTCAG	3 cut(s)	442, 606, 1072
BspEI	TCCGGA	1 cut(s)	325
BspLI	GGNNCC	4 cut(s)	6, 634, 681, 1758
BspPI	GGATC	6 cut(s)	379, 556, 1461, 1751, 1764, 1905
BspQI	GCTCTTC	1 cut(s)	815
BspT104I	TTCGAA	1 cut(s)	454
BspTNI	GGTCTC	1 cut(s)	1858
BsrDI	GCAATG	3 cut(s)	534, 1533, 1584
BsrFI	RCCGGY	1 cut(s)	1462
BsrI	ACTGG	2 cut(s)	406, 1365
BssAI	RCCGGY	1 cut(s)	1462
BssECI	CCNNGG	5 cut(s)	70, 394, 675, 683, 1218
BssMI	GATC	7 cut(s)	384, 561, 1209, 1453, 1665, 1756, 1897
BssNI	GRCGYC	2 cut(s)	189, 1748
BssT1I	CCWWGG	1 cut(s)	683
Bst2UI	CCWGG	3 cut(s)	626, 789, 1089
Bst4CI	ACNGT	6 cut(s)	121, 1219, 1280, 1576, 1683, 1846
Bst6I	CTCTTC	4 cut(s)	327, 442, 554, 815
BstACI	GRCGYC	2 cut(s)	189, 1748
BstBI	TTCGAA	1 cut(s)	454
BstC8I	GCNNGC	8 cut(s)	848, 876, 1029, 1172, 1464, 1518, 1767, 1834
BstDEI	CTNAG	6 cut(s)	429, 593, 642, 1080, 1137, 1761
BstDSI	CCRYGG	2 cut(s)	70, 1218
BstF5I	GGATG	4 cut(s)	66, 1064, 1737, 1885
BstH2I	RGCGCY	1 cut(s)	875
BstHHI	GCGC	1 cut(s)	874
BstKTI	GATC	7 cut(s)	387, 564, 1212, 1456, 1668, 1759, 1900
BstMAI	GTCTC	2 cut(s)	285, 1858
BstMBI	GATC	7 cut(s)	384, 561, 1209, 1453, 1665, 1756, 1897
BstMCI	CGRYCG	2 cut(s)	1205, 1274
BstMWI	GCNNNNNNNGC	6 cut(s)	195, 304, 313, 495, 916, 1502
BstNI	CCWGG	3 cut(s)	626, 789, 1089
BstNSI	RCATGY	4 cut(s)	1265, 1330, 1836, 1894
BstSCI	CCNGG	9 cut(s)	13, 184, 554, 624, 787, 878, 890, 1087, 1268
BstSLI	GKGCMC	1 cut(s)	1428
BstV1I	GCAGC	4 cut(s)	37, 737, 837, 906
BstV2I	GAAGAC	5 cut(s)	184, 211, 241, 1026, 1170
BstX2I	RGATCY	4 cut(s)	384, 561, 1453, 1756
BstYI	RGATCY	4 cut(s)	384, 561, 1453, 1756
BstZI	CGGCCG	1 cut(s)	1271
Bsu36I	CCTNAGG	1 cut(s)	1137
BsuRI	GGCC	3 cut(s)	878, 965, 1273
BtgI	CCRYGG	2 cut(s)	70, 1218
BtsCI	GGATG	4 cut(s)	66, 1064, 1737, 1885
BtsIMutI	CAGTG	2 cut(s)	117, 1851
Cac8I	GCNNGC	8 cut(s)	848, 876, 1029, 1172, 1464, 1518, 1767, 1834
CfoI	GCGC	1 cut(s)	874
Cfr10I	RCCGGY	1 cut(s)	1462
Cfr13I	GGNCC	4 cut(s)	4, 791, 959, 1804
CseI	GACGC	3 cut(s)	178, 1181, 1552
Csp6I	GTAC	2 cut(s)	1300, 1661
CviAII	CATG	7 cut(s)	174, 1262, 1303, 1327, 1421, 1833, 1891
CviQI	GTAC	2 cut(s)	1300, 1661
DdeI	CTNAG	6 cut(s)	429, 593, 642, 1080, 1137, 1761
DpnI	GATC	7 cut(s)	386, 563, 1211, 1455, 1667, 1758, 1899
DpnII	GATC	7 cut(s)	384, 561, 1209, 1453, 1665, 1756, 1897
EaeI	YGGCCR	3 cut(s)	876, 963, 1271
EagI	CGGCCG	1 cut(s)	1271
Eam1104I	CTCTTC	4 cut(s)	327, 442, 554, 815
EarI	CTCTTC	4 cut(s)	327, 442, 554, 815
EciI	GGCGGA	1 cut(s)	23
Ecl136II	GAGCTC	3 cut(s)	307, 316, 1042
EclXI	CGGCCG	1 cut(s)	1271
Eco130I	CCWWGG	1 cut(s)	683
Eco24I	GRGCYC	3 cut(s)	309, 318, 1044
Eco31I	GGTCTC	1 cut(s)	1858
Eco47I	GGWCC	4 cut(s)	4, 791, 959, 1804
Eco47III	AGCGCT	1 cut(s)	873
Eco52I	CGGCCG	1 cut(s)	1271
Eco53kI	GAGCTC	3 cut(s)	307, 316, 1042
Eco57I	CTGAAG	4 cut(s)	81, 1365, 1386, 1478
Eco81I	CCTNAGG	1 cut(s)	1137
Eco88I	CYCGRG	2 cut(s)	854, 1655
EcoICRI	GAGCTC	3 cut(s)	307, 316, 1042
EcoRII	CCWGG	3 cut(s)	624, 787, 1087
EcoT14I	CCWWGG	1 cut(s)	683
EcoT22I	ATGCAT	1 cut(s)	1182
EcoT38I	GRGCYC	3 cut(s)	309, 318, 1044
ErhI	CCWWGG	1 cut(s)	683
FaeI	CATG	7 cut(s)	177, 1265, 1306, 1330, 1424, 1836, 1894
FalI	AAGNNNNNCTT	4 cut(s)	908, 940, 1011, 1043
FaqI	GGGAC	4 cut(s)	241, 335, 1236, 1252
FatI	CATG	7 cut(s)	173, 1261, 1302, 1326, 1420, 1832, 1890
FauI	CCCGC	1 cut(s)	360
FbaI	TGATCA	1 cut(s)	1665
Fnu4HI	GCNGC	5 cut(s)	26, 726, 851, 920, 1146
FokI	GGATG	4 cut(s)	53, 1071, 1744, 1892
FriOI	GRGCYC	3 cut(s)	309, 318, 1044
Fsp4HI	GCNGC	5 cut(s)	26, 726, 851, 920, 1146
FspBI	CTAG	1 cut(s)	1010
GlaI	GCGC	1 cut(s)	873
GluI	GCNGC	5 cut(s)	26, 726, 851, 920, 1146
GsaI	CCCAGC	1 cut(s)	569
GsuI	CTGGAG	2 cut(s)	401, 771
HaeII	RGCGCY	1 cut(s)	875
HaeIII	GGCC	3 cut(s)	878, 965, 1273
HgaI	GACGC	3 cut(s)	178, 1181, 1552
HhaI	GCGC	1 cut(s)	874
Hin1I	GRCGYC	2 cut(s)	189, 1748
Hin1II	CATG	7 cut(s)	177, 1265, 1306, 1330, 1424, 1836, 1894
Hin6I	GCGC	1 cut(s)	872
HinP1I	GCGC	1 cut(s)	872
HincII	GTYRAC	3 cut(s)	343, 367, 1371
HindII	GTYRAC	3 cut(s)	343, 367, 1371
HinfI	GANTC	8 cut(s)	207, 243, 348, 953, 1240, 1395, 1717, 1775
HpaI	GTTAAC	1 cut(s)	1371
HphI	GGTGA	3 cut(s)	34, 229, 428
Hpy166II	GTNNAC	7 cut(s)	343, 367, 1064, 1072, 1371, 1426, 1617
Hpy188III	TCNNGA	5 cut(s)	326, 502, 1010, 1552, 1699
Hpy8I	GTNNAC	7 cut(s)	343, 367, 1064, 1072, 1371, 1426, 1617
Hpy99I	CGWCG	1 cut(s)	1753
HpyAV	CCTTC	6 cut(s)	55, 105, 113, 435, 623, 1340
HpyCH4III	ACNGT	6 cut(s)	121, 1219, 1280, 1576, 1683, 1846
HpyCH4IV	ACGT	3 cut(s)	225, 1470, 1748
HpyCH4V	TGCA	9 cut(s)	177, 372, 1180, 1388, 1426, 1505, 1589, 1842, 1890
HpyF10VI	GCNNNNNNNGC	6 cut(s)	195, 304, 313, 495, 916, 1502
HpyF3I	CTNAG	6 cut(s)	429, 593, 642, 1080, 1137, 1761
HpySE526I	ACGT	3 cut(s)	225, 1470, 1748
Hsp92I	GRCGYC	2 cut(s)	189, 1748
Hsp92II	CATG	7 cut(s)	177, 1265, 1306, 1330, 1424, 1836, 1894
HspAI	GCGC	1 cut(s)	872
Kpn2I	TCCGGA	1 cut(s)	325
KroI	GCCGGC	1 cut(s)	1462
KroNI	GCCGGC	1 cut(s)	1464
Ksp22I	TGATCA	1 cut(s)	1665
KspAI	GTTAAC	1 cut(s)	1371
Kzo9I	GATC	7 cut(s)	384, 561, 1209, 1453, 1665, 1756, 1897
LguI	GCTCTTC	1 cut(s)	815
LmnI	GCTCC	7 cut(s)	33, 638, 790, 869, 882, 1039, 1314
Lsp1109I	GCAGC	4 cut(s)	37, 737, 837, 906
LweI	GCATC	2 cut(s)	1167, 1179
MaeI	CTAG	1 cut(s)	1010
MaeII	ACGT	3 cut(s)	225, 1470, 1748
MaeIII	GTNAC	1 cut(s)	1580
MalI	GATC	7 cut(s)	386, 563, 1211, 1455, 1667, 1758, 1899
MboI	GATC	7 cut(s)	384, 561, 1209, 1453, 1665, 1756, 1897
MflI	RGATCY	4 cut(s)	384, 561, 1453, 1756
MhlI	GDGCHC	4 cut(s)	309, 318, 1044, 1428
MluCI	AATT	6 cut(s)	745, 1197, 1227, 1500, 1691, 1781
MlyI	GAGTC	6 cut(s)	201, 237, 357, 962, 1726, 1769
MmeI	TCCRAC	7 cut(s)	237, 498, 820, 1017, 1185, 1731, 1875
Mph1103I	ATGCAT	1 cut(s)	1182
MroI	TCCGGA	1 cut(s)	325
MroNI	GCCGGC	1 cut(s)	1462
MroXI	GAANNNNTTC	1 cut(s)	1399
MseI	TTAA	4 cut(s)	984, 1116, 1370, 1725
MspR9I	CCNGG	9 cut(s)	15, 186, 556, 626, 789, 880, 892, 1089, 1270
MvaI	CCWGG	3 cut(s)	626, 789, 1089
MwoI	GCNNNNNNNGC	6 cut(s)	195, 304, 313, 495, 916, 1502
NaeI	GCCGGC	1 cut(s)	1464
NciI	CCSGG	6 cut(s)	15, 186, 556, 880, 892, 1270
NdeII	GATC	7 cut(s)	384, 561, 1209, 1453, 1665, 1756, 1897
NgoMIV	GCCGGC	1 cut(s)	1462
NlaIII	CATG	7 cut(s)	177, 1265, 1306, 1330, 1424, 1836, 1894
NlaIV	GGNNCC	4 cut(s)	6, 634, 681, 1758
NmeAIII	GCCGAG	1 cut(s)	114
NsiI	ATGCAT	1 cut(s)	1182
NspI	RCATGY	4 cut(s)	1265, 1330, 1836, 1894
NspV	TTCGAA	1 cut(s)	454
PaeI	GCATGC	1 cut(s)	1836
PciI	ACATGT	2 cut(s)	1261, 1326
PciSI	GCTCTTC	1 cut(s)	815
PcsI	WCGNNNNNNNCGW	1 cut(s)	1550
PdiI	GCCGGC	1 cut(s)	1464
PdmI	GAANNNNTTC	1 cut(s)	1399
PfeI	GAWTC	2 cut(s)	1240, 1395
PflFI	GACNNNGTC	1 cut(s)	347
PfoI	TCCNGGA	2 cut(s)	554, 624
PkrI	GCNGC	5 cut(s)	27, 727, 852, 921, 1147
PleI	GAGTC	6 cut(s)	201, 237, 356, 961, 1725, 1769
PpsI	GAGTC	6 cut(s)	201, 237, 356, 961, 1725, 1769
PscI	ACATGT	2 cut(s)	1261, 1326
Psp124BI	GAGCTC	3 cut(s)	309, 318, 1044
Psp6I	CCWGG	3 cut(s)	624, 787, 1087
PspFI	CCCAGC	1 cut(s)	565
PspGI	CCWGG	3 cut(s)	624, 787, 1087
PspN4I	GGNNCC	4 cut(s)	6, 634, 681, 1758
PspPI	GGNCC	4 cut(s)	4, 791, 959, 1804
PsuI	RGATCY	4 cut(s)	384, 561, 1453, 1756
PsyI	GACNNNGTC	1 cut(s)	347
RsaI	GTAC	2 cut(s)	1301, 1662
RsaNI	GTAC	2 cut(s)	1300, 1661
SacI	GAGCTC	3 cut(s)	309, 318, 1044
SapI	GCTCTTC	1 cut(s)	815
SaqAI	TTAA	4 cut(s)	984, 1116, 1370, 1725
SatI	GCNGC	5 cut(s)	26, 726, 851, 920, 1146
Sau3AI	GATC	7 cut(s)	384, 561, 1209, 1453, 1665, 1756, 1897
Sau96I	GGNCC	4 cut(s)	4, 791, 959, 1804
SchI	GAGTC	6 cut(s)	201, 237, 357, 962, 1726, 1769
ScrFI	CCNGG	9 cut(s)	15, 186, 556, 626, 789, 880, 892, 1089, 1270
SduI	GDGCHC	4 cut(s)	309, 318, 1044, 1428
SfaNI	GCATC	2 cut(s)	1167, 1179
SfuI	TTCGAA	1 cut(s)	454
SinI	GGWCC	4 cut(s)	4, 791, 959, 1804
SmlI	CTYRAG	3 cut(s)	493, 780, 1610
SmoI	CTYRAG	3 cut(s)	493, 780, 1610
SphI	GCATGC	1 cut(s)	1836
Sse9I	AATT	6 cut(s)	745, 1197, 1227, 1500, 1691, 1781
SsiI	CCGC	7 cut(s)	23, 34, 75, 353, 636, 723, 1145
SspMI	CTAG	1 cut(s)	1010
SstI	GAGCTC	3 cut(s)	309, 318, 1044
StyD4I	CCNGG	9 cut(s)	13, 184, 554, 624, 787, 878, 890, 1087, 1268
StyI	CCWWGG	1 cut(s)	683
TaaI	ACNGT	6 cut(s)	121, 1219, 1280, 1576, 1683, 1846
TaiI	ACGT	3 cut(s)	228, 1473, 1751
TaqI	TCGA	7 cut(s)	90, 454, 462, 657, 1231, 1498, 1773
TaqII	GACCGA	2 cut(s)	360, 1191
TasI	AATT	6 cut(s)	745, 1197, 1227, 1500, 1691, 1781
TatI	WGTACW	1 cut(s)	1299
TauI	GCSGC	1 cut(s)	1148
TfiI	GAWTC	2 cut(s)	1240, 1395
Tru1I	TTAA	4 cut(s)	984, 1116, 1370, 1725
Tru9I	TTAA	4 cut(s)	984, 1116, 1370, 1725
TscAI	CASTG	2 cut(s)	124, 1851
TseI	GCWGC	4 cut(s)	25, 725, 850, 919
TspDTI	ATGAA	5 cut(s)	682, 886, 1319, 1704, 1748
TspGWI	ACGGA	1 cut(s)	1172
TspRI	CASTG	2 cut(s)	124, 1851
Tth111I	GACNNNGTC	1 cut(s)	347
VneI	GTGCAC	1 cut(s)	1424
VpaK11BI	GGWCC	4 cut(s)	4, 791, 959, 1804
XapI	RAATTY	3 cut(s)	1197, 1227, 1691
XbaI	TCTAGA	1 cut(s)	1009
XceI	RCATGY	4 cut(s)	1265, 1330, 1836, 1894
XmnI	GAANNNNTTC	1 cut(s)	1399
XspI	CTAG	1 cut(s)	1010
ZraI	GACGTC	1 cut(s)	1749
Zsp2I	ATGCAT	1 cut(s)	1182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.