Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0016162

Physical Location & Seq

Genomic Coordinates Reverse (-)

65729148 .. 65731699

Gene Structure 2552 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005190

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGACTGCAATCTCACACCCCCTGCGCTCAAACTGTGCCCATCTCGTGGTCTCTTGTACTCGTTTCACCTCCACCCTCTCCTCACTCTTCACCACTAACGTCCCAAAACCCTTCAACTCTCCAAAACCCCATCACCACCAAAACCAGACCAAACCCATCATCCCCTATACTCAGACCCTCAAAGACCCCCTCCTCTCCCTCATCAAATCATGCACCCACAAATCCCATTTGCTCCAAATCCACGCCCACATTCTCCAAACCTCTCTCATTCTCGACTCCTCAATCTGCTTCCACTTCTTGTCCCTCGTTTCGCTTTCCCCACCTTTCCAAAACTTGACCTATTCCCGCCAATTCTTGTTTCAAATCCCCAAACCCAAAGCCATTCACTACAACACTGTGATAAGAGCTTACTCAACGAGTGATTCACCCCAGGAGGGGATTCATCTTTACCTTGATTTGAGGCGGCGAGGTCTTCCTAGCAACGCTCTCTCGTCCTCTTTCGTAATGAAATGCTGTGTTAGAGTCAAGTACTTATTAGGTGGAACTCAGGTTCAGGCTAGGATTGTGAGAGATGGGCAGCAATCAGACAGTCGTTTACTCACGACTTTGATGGACCTGTACTCCATTTGTGGCGAGTATGATGATGCATGTAAGGTGTTCGACGAAATTCTTCAGAGAGACACTGTTGCCTGGAATGTGTTGATTTCTTGTTTTCTGCATAACAGCCGCAGCAGGGATGCTTTGGGTTTGTTTGACATTATGCGGAGCGAAAGTTACAGATGTGAGCCTGATGATGTTACTTGTTTACTCATGCTCCAAGCTTGTGCAAACTTGAATGCGTTGGAGTTTGGCGAAAGGGTTCATAGGTACATTGAAGAACATGGTTATATTGGTGCTTCTAATCTGTGTAATGCTCTTATAACTATGTATTCGCGGTGTGGGTGTTTGGATCAGGCTTATGAGGTGTTTAAGGGGATGCCGGCTAGAAATGTGGTTTCATGGAGTGCAATGATTTCTGGGCTTGCTGTGAATGGGCATGGCAGAGACGCTGTTGAAGCGTTTTGTGAGATGCAGAGAATGGGGGTTTTACCTGATGAACACACTTTTACTGGTGTTCTTTCGGCTTGCAGTCATTGTGGGTTGGTTGATCAAGCAATGGATATTTTTGATCGCATGAGCAAAGAGTTTGGAGTAGTGCCTAATGTCCATCACTATGGGTGCTTGGTTGATCTTTTGGGTCGGGCTGGTCTACTTGATCAAGCATATCAGCTTATCATGTCGATGGATATGAAACCAGATTCGAAGATATGGAGAACCTTACTTCGGGCTTGCAAGATTCATAACTATGAAACCCTTGGGGAACATGTGGTGGATCATTTGATCGAACTCAAGGCTCTAGAGGCAGGGGACTATGTTCTGTTGATGAATATTTACTCTTCAGCTGAAAACTGGGAGAAATTAGCTGAATTGAGGAAGTTTATGAAGGAAAAAGCAATTCAAACTACACCAGGCTGCAGCACAATTATACTGAATGGAACAGTCCATGAGTTTTTGGTGGATGATGTTTCGCATCCAAGGAAGGACGAAATCTACAGAATGCTGGATGAGATCAATAGTCAGCTGAAGATTGCTGGTTATGTTGCTGATGTATCATCAGAACTGCACAAGTTGGGGACAGAAGAGAAGGGATATGCACTCTCTTATCACAGTGAGAAATTAGCTATTGCTTTTGGAGTACTGGCAACTCCACCCGGCACAACAATTAGAGTGGCCAAGAATCTTCGCACTTGTGTTGATTGCCACAACTTTGCGAGGATTCTCTCAGGGGTTTATAACAGGACGATAATTGTTAGAGACTGCAGCCGGTTTCATCATTTTCGGGAGGGACGCTGCTCGTGCAATGGCTATTGGAAGTTTGGAGTTGGTGAGGTGCAACAGATTGAGGAGGCAGTACTACAACCGCAACAAATCCGGAGGCAGCTGATGGATCTACCCATCGATATCGTGGTGTACATCCTTTTGAGACTGCCGGTAGAGTCAATGCATTGCATCCGATGTGTGTCCAAGACATTGTTAAACACAGTTGACAGCCCCTCTTTCGTTAGGCAGCACACACTTTCACTCATTGCTGGCAACAGCCATGTTGTTCTGAGTACCTCAACTTATGTGCTTTGCTCAAACAAGTCCTCCCGGGGGAGAAGTGTATATTGCGACTTTGCAATCACTGAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_1 PPR_2

Protein Analysis

745

Amino Acids

83.85

Weight (kDa)

7.53

Isoelectric Point (pI)

44.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	226 - 277	1.1e-08	PPR repeat family
PPR_long	PF17177	301 - 425	5.9e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	329 - 377	3.1e-12	PPR repeat family
PPR	PF01535	332 - 362	8.7e-07	PPR repeat
E_motif	PF20431	449 - 508	2.9e-14	E motif
DYW_deaminase	PF14432	545 - 637	9.5e-35	DYW family of nucleic acid deaminases
F-box	PF00646	661 - 701	1.5e-06	F-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47530
fragaria_vesca	FvH4_5g14900
malus_domestica	MD06G1193700.v1.1 MD14G1200800.v1.1
prunus_persica	Prupe.5G194000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0181481
rosa_laevigata	RLG00000005190
rosa_multiflora	Rmu_co8291233.1_g000001 Rmu_sc0002060.1_g000023
rosa_roxburghii	Rroxscaffold_3G00271960
rosa_rugosa	Rorug06G0441700
rosa_samantha	Rh7AG043500 Rh7BG042900 Rh7CG044700
rosa_wichuraiana	Rw7G003620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	920, 1833
AccB7I	CCANNNNNTGG	1 cut(s)	46
AccI	GTMKAC	1 cut(s)	1249
AccII	CGCG	1 cut(s)	934
AccIII	TCCGGA	1 cut(s)	1971
AciI	CCGC	6 cut(s)	346, 463, 727, 763, 934, 1961
AclWI	GGATC	3 cut(s)	957, 1380, 1995
AcoI	YGGCCR	1 cut(s)	1770
AcsI	RAATTY	1 cut(s)	666
AcuI	CTGAAG	3 cut(s)	656, 1422, 1643
AfaI	GTAC	8 cut(s)	58, 530, 620, 869, 1737, 1953, 2012, 2155
AfiI	CCNNNNNNNGG	6 cut(s)	46, 434, 435, 733, 1323, 2193
AflIII	ACRYGT	1 cut(s)	1363
AgsI	TTSAA	6 cut(s)	115, 362, 835, 875, 1055, 1499
AjnI	CCWGG	3 cut(s)	429, 689, 1507
AjuI	GAANNNNNNNTTGG	2 cut(s)	342, 374
AloI	GAACNNNNNNTCC	2 cut(s)	534, 566
AluBI	AGCT	8 cut(s)	407, 821, 1270, 1442, 1463, 1621, 1721, 1981
AluI	AGCT	8 cut(s)	407, 821, 1270, 1442, 1463, 1621, 1721, 1981
Alw26I	GTCTC	5 cut(s)	55, 672, 1038, 1848, 2017
AlwI	GGATC	3 cut(s)	957, 1380, 1995
Ama87I	CYCGRG	1 cut(s)	2190
Aor13HI	TCCGGA	1 cut(s)	1971
AoxI	GGCC	1 cut(s)	1770
ApeKI	GCWGC	8 cut(s)	577, 729, 1512, 1515, 1860, 1890, 1978, 2107
ApoI	RAATTY	1 cut(s)	666
Asp700I	GAANNNNTTC	2 cut(s)	669, 858
AspLEI	GCGC	1 cut(s)	27
AspS9I	GGNCC	1 cut(s)	613
AsuC2I	CCSGG	3 cut(s)	1752, 2191, 2192
AsuHPI	GGTGA	5 cut(s)	58, 82, 125, 417, 1937
AsuII	TTCGAA	1 cut(s)	1301
AvaI	CYCGRG	1 cut(s)	2190
AvaII	GGWCC	1 cut(s)	613
BaeGI	GKGCMC	1 cut(s)	40
BalI	TGGCCA	1 cut(s)	1772
BauI	CACGAG	2 cut(s)	44, 1894
BbsI	GAAGAC	1 cut(s)	464
BbvI	GCAGC	8 cut(s)	589, 741, 1499, 1527, 1872, 1877, 1990, 2119
BccI	CCATC	9 cut(s)	48, 138, 164, 566, 604, 1215, 1276, 1978, 2003
BciT130I	CCWGG	3 cut(s)	431, 691, 1509
BclI	TGATCA	2 cut(s)	1147, 1255
BcnI	CCSGG	3 cut(s)	1752, 2191, 2192
BcoDI	GTCTC	5 cut(s)	55, 672, 1038, 1848, 2017
BfaI	CTAG	4 cut(s)	477, 558, 984, 1397
BfmI	CTRYAG	3 cut(s)	1513, 1591, 1858
BmcAI	AGTACT	3 cut(s)	530, 1737, 1953
Bme1390I	CCNGG	6 cut(s)	431, 691, 1509, 1752, 2191, 2192
Bme18I	GGWCC	1 cut(s)	613
BmeT110I	CYCGRG	1 cut(s)	2190
BmgT120I	GGNCC	1 cut(s)	613
BmrFI	CCNGG	6 cut(s)	431, 691, 1509, 1752, 2191, 2192
BmrI	ACTGGG	1 cut(s)	1459
BmsI	GCATC	6 cut(s)	634, 727, 966, 1059, 1579, 2058
BmuI	ACTGGG	1 cut(s)	1459
BpiI	GAAGAC	1 cut(s)	464
Bpu14I	TTCGAA	1 cut(s)	1301
BpuEI	CTTGAG	1 cut(s)	1373
BpuMI	CCSGG	3 cut(s)	1752, 2191, 2192
Bsa29I	ATCGAT	1 cut(s)	1998
BsaI	GGTCTC	1 cut(s)	55
BsaJI	CCNNGG	5 cut(s)	429, 1354, 1574, 2190, 2191
BsaWI	WCCGGW	1 cut(s)	1971
BsaXI	ACNNNNNCTCC	8 cut(s)	605, 635, 757, 787, 798, 828, 2171, 2201
Bsc4I	CCNNNNNNNGG	6 cut(s)	46, 434, 435, 733, 1323, 2193
Bse118I	RCCGGY	3 cut(s)	979, 1863, 2029
Bse1I	ACTGG	3 cut(s)	1114, 1454, 1743
Bse3DI	GCAATG	5 cut(s)	1014, 1161, 1906, 2044, 2124
BseAI	TCCGGA	1 cut(s)	1971
BseBI	CCWGG	3 cut(s)	431, 691, 1509
BseCI	ATCGAT	1 cut(s)	1998
BseDI	CCNNGG	5 cut(s)	429, 1354, 1574, 2190, 2191
BseGI	GGATG	8 cut(s)	159, 742, 981, 1564, 1570, 1609, 2013, 2049
BseLI	CCNNNNNNNGG	6 cut(s)	46, 434, 435, 733, 1323, 2193
BseMI	GCAATG	5 cut(s)	1014, 1161, 1906, 2044, 2124
BseMII	CTCAG	5 cut(s)	185, 560, 1836, 2141, 2217
BseNI	ACTGG	3 cut(s)	1114, 1454, 1743
BseRI	GAGGAG	4 cut(s)	70, 182, 268, 1958
BseSI	GKGCMC	1 cut(s)	40
BseXI	GCAGC	8 cut(s)	589, 741, 1499, 1527, 1872, 1877, 1990, 2119
BsgI	GTGCAG	1 cut(s)	1646
Bsh1236I	CGCG	1 cut(s)	934
BshFI	GGCC	1 cut(s)	1772
BshVI	ATCGAT	1 cut(s)	1998
BsiHKCI	CYCGRG	1 cut(s)	2190
BsiSI	CCGG	6 cut(s)	980, 1752, 1864, 1972, 2030, 2191
BslFI	GGGAC	5 cut(s)	86, 286, 1421, 1687, 1899
BslI	CCNNNNNNNGG	6 cut(s)	46, 434, 435, 733, 1323, 2193
BsmAI	GTCTC	5 cut(s)	55, 672, 1038, 1848, 2017
BsmBI	CGTCTC	1 cut(s)	1038
BsmFI	GGGAC	5 cut(s)	86, 286, 1421, 1687, 1899
BsmI	GAATGC	2 cut(s)	841, 1602
BsnI	GGCC	1 cut(s)	1772
Bso31I	GGTCTC	1 cut(s)	55
BsoBI	CYCGRG	1 cut(s)	2190
Bsp119I	TTCGAA	1 cut(s)	1301
Bsp1286I	GDGCHC	1 cut(s)	40
Bsp13I	TCCGGA	1 cut(s)	1971
Bsp1407I	TGTACA	1 cut(s)	2010
Bsp143I	GATC	9 cut(s)	949, 1147, 1168, 1228, 1255, 1372, 1380, 1608, 1987
BspACI	CCGC	6 cut(s)	346, 463, 727, 763, 934, 1961
BspANI	GGCC	1 cut(s)	1772
BspCNI	CTCAG	5 cut(s)	184, 559, 1835, 2142, 2218
BspDI	ATCGAT	1 cut(s)	1998
BspEI	TCCGGA	1 cut(s)	1971
BspFNI	CGCG	1 cut(s)	934
BspMAI	CTGCAG	2 cut(s)	1517, 1862
BspPI	GGATC	3 cut(s)	957, 1380, 1995
BspT104I	TTCGAA	1 cut(s)	1301
BspTNI	GGTCTC	1 cut(s)	55
BsrDI	GCAATG	5 cut(s)	1014, 1161, 1906, 2044, 2124
BsrFI	RCCGGY	3 cut(s)	979, 1863, 2029
BsrGI	TGTACA	1 cut(s)	2010
BsrI	ACTGG	3 cut(s)	1114, 1454, 1743
BssAI	RCCGGY	3 cut(s)	979, 1863, 2029
BssECI	CCNNGG	5 cut(s)	429, 1354, 1574, 2190, 2191
BssMI	GATC	9 cut(s)	949, 1147, 1168, 1228, 1255, 1372, 1380, 1608, 1987
BssSI	CACGAG	2 cut(s)	44, 1894
BssT1I	CCWWGG	2 cut(s)	1354, 1574
Bst2BI	CACGAG	2 cut(s)	44, 1894
Bst2UI	CCWGG	3 cut(s)	431, 691, 1509
Bst4CI	ACNGT	7 cut(s)	35, 397, 590, 685, 1540, 1709, 2083
Bst6I	CTCTTC	3 cut(s)	92, 1441, 1674
BstAUI	TGTACA	1 cut(s)	2010
BstBI	TTCGAA	1 cut(s)	1301
BstC8I	GCNNGC	5 cut(s)	981, 1023, 1126, 1330, 2131
BstDEI	CTNAG	5 cut(s)	171, 546, 1822, 2150, 2226
BstF5I	GGATG	8 cut(s)	159, 742, 981, 1564, 1570, 1609, 2013, 2049
BstFNI	CGCG	1 cut(s)	934
BstHHI	GCGC	1 cut(s)	27
BstKTI	GATC	9 cut(s)	952, 1150, 1171, 1231, 1258, 1375, 1383, 1611, 1990
BstMAI	GTCTC	5 cut(s)	55, 672, 1038, 1848, 2017
BstMBI	GATC	9 cut(s)	949, 1147, 1168, 1228, 1255, 1372, 1380, 1608, 1987
BstMWI	GCNNNNNNNGC	3 cut(s)	1055, 1400, 1896
BstNI	CCWGG	3 cut(s)	431, 691, 1509
BstNSI	RCATGY	2 cut(s)	651, 1367
BstSCI	CCNGG	6 cut(s)	429, 689, 1507, 1750, 2189, 2190
BstSFI	CTRYAG	3 cut(s)	1513, 1591, 1858
BstSLI	GKGCMC	1 cut(s)	40
BstUI	CGCG	1 cut(s)	934
BstV1I	GCAGC	8 cut(s)	589, 741, 1499, 1527, 1872, 1877, 1990, 2119
BstV2I	GAAGAC	1 cut(s)	464
BstX2I	RGATCY	1 cut(s)	1987
BstXI	CCANNNNNNTGG	1 cut(s)	1214
BstYI	RGATCY	1 cut(s)	1987
Bsu15I	ATCGAT	1 cut(s)	1998
BsuRI	GGCC	1 cut(s)	1772
BsuTUI	ATCGAT	1 cut(s)	1998
BtsCI	GGATG	8 cut(s)	159, 742, 981, 1564, 1570, 1609, 2013, 2049
BtsIMutI	CAGTG	4 cut(s)	393, 681, 1714, 2223
Cac8I	GCNNGC	5 cut(s)	981, 1023, 1126, 1330, 2131
CfoI	GCGC	1 cut(s)	27
Cfr10I	RCCGGY	3 cut(s)	979, 1863, 2029
Cfr13I	GGNCC	1 cut(s)	613
Cfr9I	CCCGGG	1 cut(s)	2190
ClaI	ATCGAT	1 cut(s)	1998
CseI	GACGC	2 cut(s)	1055, 1896
Csp6I	GTAC	8 cut(s)	57, 529, 619, 868, 1736, 1952, 2011, 2154
CspCI	CAANNNNNGTGG	2 cut(s)	1749, 1784
CviQI	GTAC	8 cut(s)	57, 529, 619, 868, 1736, 1952, 2011, 2154
DdeI	CTNAG	5 cut(s)	171, 546, 1822, 2150, 2226
DpnI	GATC	9 cut(s)	951, 1149, 1170, 1230, 1257, 1374, 1382, 1610, 1989
DpnII	GATC	9 cut(s)	949, 1147, 1168, 1228, 1255, 1372, 1380, 1608, 1987
EaeI	YGGCCR	1 cut(s)	1770
Eam1104I	CTCTTC	3 cut(s)	92, 1441, 1674
EarI	CTCTTC	3 cut(s)	92, 1441, 1674
Eco130I	CCWWGG	2 cut(s)	1354, 1574
Eco31I	GGTCTC	1 cut(s)	55
Eco32I	GATATC	1 cut(s)	2002
Eco47I	GGWCC	1 cut(s)	613
Eco57I	CTGAAG	3 cut(s)	656, 1422, 1643
Eco88I	CYCGRG	1 cut(s)	2190
EcoRII	CCWGG	3 cut(s)	429, 689, 1507
EcoRV	GATATC	1 cut(s)	2002
EcoT14I	CCWWGG	2 cut(s)	1354, 1574
EcoT22I	ATGCAT	2 cut(s)	649, 2046
ErhI	CCWWGG	2 cut(s)	1354, 1574
Esp3I	CGTCTC	1 cut(s)	1038
FaqI	GGGAC	5 cut(s)	86, 286, 1421, 1687, 1899
FauI	CCCGC	1 cut(s)	353
FbaI	TGATCA	2 cut(s)	1147, 1255
FblI	GTMKAC	1 cut(s)	1249
FokI	GGATG	8 cut(s)	146, 749, 988, 1557, 1571, 1616, 2000, 2036
FspBI	CTAG	4 cut(s)	477, 558, 984, 1397
GlaI	GCGC	1 cut(s)	26
HaeIII	GGCC	1 cut(s)	1772
HapII	CCGG	6 cut(s)	980, 1752, 1864, 1972, 2030, 2191
HgaI	GACGC	2 cut(s)	1055, 1896
HhaI	GCGC	1 cut(s)	27
Hin6I	GCGC	1 cut(s)	25
HinP1I	GCGC	1 cut(s)	25
HincII	GTYRAC	1 cut(s)	2086
HindII	GTYRAC	1 cut(s)	2086
HindIII	AAGCTT	1 cut(s)	819
HinfI	GANTC	9 cut(s)	275, 422, 439, 522, 1298, 1336, 1777, 1816, 2036
HpaII	CCGG	6 cut(s)	980, 1752, 1864, 1972, 2030, 2191
HphI	GGTGA	5 cut(s)	58, 82, 125, 417, 1937
Hpy166II	GTNNAC	5 cut(s)	596, 806, 1250, 2011, 2086
Hpy188I	TCNGA	6 cut(s)	174, 586, 675, 1657, 2054, 2151
Hpy188III	TCNNGA	5 cut(s)	272, 601, 1397, 1880, 1972
Hpy8I	GTNNAC	5 cut(s)	596, 806, 1250, 2011, 2086
Hpy99I	CGWCG	1 cut(s)	665
HpyAV	CCTTC	4 cut(s)	121, 1477, 1573, 1678
HpyCH4III	ACNGT	7 cut(s)	35, 397, 590, 685, 1540, 1709, 2083
HpyCH4IV	ACGT	1 cut(s)	99
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1055, 1400, 1896
HpyF3I	CTNAG	5 cut(s)	171, 546, 1822, 2150, 2226
HpySE526I	ACGT	1 cut(s)	99
HspAI	GCGC	1 cut(s)	25
Kpn2I	TCCGGA	1 cut(s)	1971
KroI	GCCGGC	1 cut(s)	979
KroNI	GCCGGC	1 cut(s)	981
Ksp22I	TGATCA	2 cut(s)	1147, 1255
Kzo9I	GATC	9 cut(s)	949, 1147, 1168, 1228, 1255, 1372, 1380, 1608, 1987
LmnI	GCTCC	3 cut(s)	237, 765, 819
Lsp1109I	GCAGC	8 cut(s)	589, 741, 1499, 1527, 1872, 1877, 1990, 2119
LweI	GCATC	6 cut(s)	634, 727, 966, 1059, 1579, 2058
MaeI	CTAG	4 cut(s)	477, 558, 984, 1397
MaeII	ACGT	1 cut(s)	99
MaeIII	GTNAC	2 cut(s)	773, 796
MalI	GATC	9 cut(s)	951, 1149, 1170, 1230, 1257, 1374, 1382, 1610, 1989
MboI	GATC	9 cut(s)	949, 1147, 1168, 1228, 1255, 1372, 1380, 1608, 1987
MboII	GAAGA	9 cut(s)	79, 464, 662, 887, 1315, 1428, 1636, 1691, 1772
MflI	RGATCY	1 cut(s)	1987
MhlI	GDGCHC	1 cut(s)	40
MlsI	TGGCCA	1 cut(s)	1772
MluCI	AATT	9 cut(s)	350, 666, 1457, 1466, 1494, 1521, 1715, 1761, 1845
MluNI	TGGCCA	1 cut(s)	1772
MlyI	GAGTC	3 cut(s)	269, 531, 2045
MmeI	TCCRAC	1 cut(s)	822
Mox20I	TGGCCA	1 cut(s)	1772
Mph1103I	ATGCAT	2 cut(s)	649, 2046
MroI	TCCGGA	1 cut(s)	1971
MroNI	GCCGGC	1 cut(s)	979
MroXI	GAANNNNTTC	2 cut(s)	669, 858
MscI	TGGCCA	1 cut(s)	1772
MseI	TTAA	2 cut(s)	969, 2075
MslI	CAYNNNNRTG	3 cut(s)	1212, 1280, 1344
Msp20I	TGGCCA	1 cut(s)	1772
MspA1I	CMGCKG	3 cut(s)	1442, 1621, 1981
MspI	CCGG	6 cut(s)	980, 1752, 1864, 1972, 2030, 2191
MspR9I	CCNGG	6 cut(s)	431, 691, 1509, 1752, 2191, 2192
Mva1269I	GAATGC	2 cut(s)	841, 1602
MvaI	CCWGG	3 cut(s)	431, 691, 1509
MvnI	CGCG	1 cut(s)	934
MwoI	GCNNNNNNNGC	3 cut(s)	1055, 1400, 1896
NaeI	GCCGGC	1 cut(s)	981
NciI	CCSGG	3 cut(s)	1752, 2191, 2192
NdeII	GATC	9 cut(s)	949, 1147, 1168, 1228, 1255, 1372, 1380, 1608, 1987
NgoMIV	GCCGGC	1 cut(s)	979
NsiI	ATGCAT	2 cut(s)	649, 2046
NspI	RCATGY	2 cut(s)	651, 1367
NspV	TTCGAA	1 cut(s)	1301
PciI	ACATGT	1 cut(s)	1363
PctI	GAATGC	2 cut(s)	841, 1602
PdiI	GCCGGC	1 cut(s)	981
PdmI	GAANNNNTTC	2 cut(s)	669, 858
PfeI	GAWTC	6 cut(s)	422, 439, 1298, 1336, 1777, 1816
PflMI	CCANNNNNTGG	1 cut(s)	46
PleI	GAGTC	3 cut(s)	269, 530, 2044
PpsI	GAGTC	3 cut(s)	269, 530, 2044
PscI	ACATGT	1 cut(s)	1363
PsiI	TTATAA	2 cut(s)	920, 1833
Psp6I	CCWGG	3 cut(s)	429, 689, 1507
PspGI	CCWGG	3 cut(s)	429, 689, 1507
PspPI	GGNCC	1 cut(s)	613
PstI	CTGCAG	2 cut(s)	1517, 1862
PsuI	RGATCY	1 cut(s)	1987
PvuII	CAGCTG	3 cut(s)	1442, 1621, 1981
RsaI	GTAC	8 cut(s)	58, 530, 620, 869, 1737, 1953, 2012, 2155
RsaNI	GTAC	8 cut(s)	57, 529, 619, 868, 1736, 1952, 2011, 2154
RseI	CAYNNNNRTG	3 cut(s)	1212, 1280, 1344
SaqAI	TTAA	2 cut(s)	969, 2075
Sau3AI	GATC	9 cut(s)	949, 1147, 1168, 1228, 1255, 1372, 1380, 1608, 1987
Sau96I	GGNCC	1 cut(s)	613
ScaI	AGTACT	3 cut(s)	530, 1737, 1953
SchI	GAGTC	3 cut(s)	269, 531, 2045
ScrFI	CCNGG	6 cut(s)	431, 691, 1509, 1752, 2191, 2192
SduI	GDGCHC	1 cut(s)	40
SfaNI	GCATC	6 cut(s)	634, 727, 966, 1059, 1579, 2058
SfcI	CTRYAG	3 cut(s)	1513, 1591, 1858
SfuI	TTCGAA	1 cut(s)	1301
SinI	GGWCC	1 cut(s)	613
SmaI	CCCGGG	1 cut(s)	2192
SmiMI	CAYNNNNRTG	3 cut(s)	1212, 1280, 1344
SmlI	CTYRAG	1 cut(s)	1388
SmoI	CTYRAG	1 cut(s)	1388
Sse9I	AATT	9 cut(s)	350, 666, 1457, 1466, 1494, 1521, 1715, 1761, 1845
SsiI	CCGC	6 cut(s)	346, 463, 727, 763, 934, 1961
SspI	AATATT	1 cut(s)	1429
SspMI	CTAG	4 cut(s)	477, 558, 984, 1397
StyD4I	CCNGG	6 cut(s)	429, 689, 1507, 1750, 2189, 2190
StyI	CCWWGG	2 cut(s)	1354, 1574
TaaI	ACNGT	7 cut(s)	35, 397, 590, 685, 1540, 1709, 2083
TaiI	ACGT	1 cut(s)	102
TaqI	TCGA	6 cut(s)	273, 660, 1280, 1301, 1383, 1998
TasI	AATT	9 cut(s)	350, 666, 1457, 1466, 1494, 1521, 1715, 1761, 1845
TatI	WGTACW	6 cut(s)	56, 528, 618, 1735, 1951, 2010
TauI	GCSGC	2 cut(s)	466, 729
TfiI	GAWTC	6 cut(s)	422, 439, 1298, 1336, 1777, 1816
Tru1I	TTAA	2 cut(s)	969, 2075
Tru9I	TTAA	2 cut(s)	969, 2075
TscAI	CASTG	4 cut(s)	400, 688, 1714, 2230
TseI	GCWGC	8 cut(s)	577, 729, 1512, 1515, 1860, 1890, 1978, 2107
TspMI	CCCGGG	1 cut(s)	2190
TspRI	CASTG	4 cut(s)	400, 688, 1714, 2230
Van91I	CCANNNNNTGG	1 cut(s)	46
VpaK11BI	GGWCC	1 cut(s)	613
XapI	RAATTY	1 cut(s)	666
XbaI	TCTAGA	1 cut(s)	1396
XceI	RCATGY	2 cut(s)	651, 1367
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2002
XmaI	CCCGGG	1 cut(s)	2190
XmiI	GTMKAC	1 cut(s)	1249
XmnI	GAANNNNTTC	2 cut(s)	669, 858
XspI	CTAG	4 cut(s)	477, 558, 984, 1397
ZrmI	AGTACT	3 cut(s)	530, 1737, 1953
Zsp2I	ATGCAT	2 cut(s)	649, 2046

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.