RLG00000007234

sugar phosphate phosphate translocator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0017803
Physical Location & Seq
Forward (+)
14790753 .. 14797856
7104 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007234

Sequence Viewer

Length: 1062 bp
ATGGCTCGAAACCGTCGAGAGTTTTTGCTCTCTCTAGATTCATATTTCCCAACTGCCTTACTCTTACCAACATCCTCTTTCCTGGTGTCGTCGACCCCGCAATGCTATAAGGTTGTAGCTCCTGTCAAAATGACACATGAAATATATGTAATGTGTGTAGTACCAATAAGTGCCTTCTTTGCTTCAAGTCTTTGGTTTGGAAACACTGGTTACCTGCATATTTCTGGGGCTTTCATCCAAATGCTCAAAGCTCTAAGTATGCATCTTACTGCAATAATATTGCTGATAGAATCCAACTTATGTGGCACTGATAAACCAAGGTGCGATGTGGTCTCAAACATGTTGCTGGTCAGTGTTGGAGTTGTCTTTTCCTTGTACCGGGAGATTCATTTTAACGTAGTTGGTACACTTTCCCAGGTTACGGGCATCTTTGCAGAAGCTCTTAGGCTGGTCTTAACACATGTCCTTCTGCAGAAGAAGGAGTCTATCATAAGTCATAACCAGGCTAAAGATATTGGTTATGCAATAGCGTTGTGTGGTGCTGTCATTTACAACTTCATAAAGGTTAAGGATGTGTGTGCATCTGCATCTCAGCTGACAATTGACACTATTCCAGACAGAATATCGAAGGATTGGAAGTTGGAGAAAAAACCAGCTTCTAGTTTTGAGAGATTGGAAGCAAAAACTTTGTTTGCATCTAAAGAAGTTGAGGAGGAGGTTAGAAAGGTATCCCCAAAGAAATTTGTGCCAGCTGAGGATACGGAAATGGCCGAGGAACAACAGACTCCAAAAGTGGTTGCCCCCACTCGGGACCAAATTAATGCTATCAAGGCTGCCATGGTGAATTCTCAGACTCTTGAAGAGGTCGCAAGACTTGAACAGGCACTGAAGTCAGGTCAGCTTCCTGCAGATTTGAAAATTTTGGATGAGGATACTCCAGTGAATACTGTTAAAGACAAGGATGATGAAATGGCCGTAACTAATGAAATTGAGGCCAATGTTGAAGTAAAAGATGTGGAGGAACAGAAGAACAATGAAGCAGAATCAATGGATCAGGAATAG

Protein Analysis

354

Amino Acids

39.25

Weight (kDa)

5.21

Isoelectric Point (pI)

37.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017803)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0427471
rosa_laevigata RLG00000007234 RLG00000007237 RLG00000007240
rosa_multiflora Rmu_sc0000603.1_g000013
rosa_roxburghii Rroxscaffold_5G00369120
rosa_rugosa Rorug04G0208500 Rorug04G0208600
rosa_samantha Rh4CG295400 Rh4DG277800 Rh4DG283200
rosa_wichuraiana Rw4G023790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 222
AccI GTMKAC 1 cut(s) 92
AciI CCGC 1 cut(s) 98
AclWI GGATC 1 cut(s) 1059
AcoI YGGCCR 2 cut(s) 768, 972
AcsI RAATTY 3 cut(s) 740, 844, 918
AcuI CTGAAG 1 cut(s) 908
AfaI GTAC 3 cut(s) 162, 377, 406
AfiI CCNNNNNNNGG 4 cut(s) 378, 421, 807, 808
AflIII ACRYGT 2 cut(s) 339, 460
AgsI TTSAA 5 cut(s) 186, 860, 878, 916, 1004
AjnI CCWGG 3 cut(s) 81, 414, 501
AluBI AGCT 7 cut(s) 119, 251, 440, 595, 656, 752, 901
AluI AGCT 7 cut(s) 119, 251, 440, 595, 656, 752, 901
Alw26I GTCTC 1 cut(s) 337
AlwI GGATC 1 cut(s) 1059
AlwNI CAGNNNCTG 1 cut(s) 886
Ama87I CYCGRG 1 cut(s) 807
AoxI GGCC 3 cut(s) 768, 972, 993
ApeKI GCWGC 1 cut(s) 833
ApoI RAATTY 3 cut(s) 740, 844, 918
AseI ATTAAT 1 cut(s) 819
AspS9I GGNCC 1 cut(s) 811
AsuC2I CCSGG 1 cut(s) 380
AsuHPI GGTGA 1 cut(s) 853
AvaI CYCGRG 1 cut(s) 807
AvaII GGWCC 1 cut(s) 811
BaeI ACNNNNGTAYC 2 cut(s) 924, 957
BbvCI CCTCAGC 1 cut(s) 753
BbvI GCAGC 1 cut(s) 820
BceAI ACGGC 1 cut(s) 959
BciT130I CCWGG 3 cut(s) 83, 416, 503
BciVI GTATCC 3 cut(s) 739, 751, 925
BcnI CCSGG 1 cut(s) 380
BcoDI GTCTC 1 cut(s) 337
BfaI CTAG 2 cut(s) 35, 660
BfmI CTRYAG 2 cut(s) 470, 906
BfuAI ACCTGC 1 cut(s) 222
BfuI GTATCC 3 cut(s) 739, 751, 925
BisI GCNGC 1 cut(s) 834
BlsI GCNGC 1 cut(s) 835
Bme1390I CCNGG 4 cut(s) 83, 380, 416, 503
Bme18I GGWCC 1 cut(s) 811
BmeT110I CYCGRG 1 cut(s) 807
BmgT120I GGNCC 1 cut(s) 811
BmiI GGNNCC 1 cut(s) 812
BmrFI CCNGG 4 cut(s) 83, 380, 416, 503
BmsI GCATC 5 cut(s) 271, 435, 590, 596, 704
BpmI CTGGAG 1 cut(s) 921
Bpu10I CCTNAGC 1 cut(s) 753
BpuMI CCSGG 1 cut(s) 380
BsaI GGTCTC 1 cut(s) 337
BsaJI CCNNGG 4 cut(s) 317, 414, 771, 837
Bsc4I CCNNNNNNNGG 4 cut(s) 378, 421, 807, 808
Bse1I ACTGG 2 cut(s) 211, 938
Bse3DI GCAATG 1 cut(s) 107
BseBI CCWGG 3 cut(s) 83, 416, 503
BseDI CCNNGG 4 cut(s) 317, 414, 771, 837
BseGI GGATG 5 cut(s) 71, 234, 577, 931, 967
BseLI CCNNNNNNNGG 4 cut(s) 378, 421, 807, 808
BseMI GCAATG 1 cut(s) 107
BseMII CTCAG 3 cut(s) 605, 744, 863
BseNI ACTGG 2 cut(s) 211, 938
BseRI GAGGAG 2 cut(s) 725, 728
BseXI GCAGC 1 cut(s) 820
BshFI GGCC 3 cut(s) 770, 974, 995
BsiHKCI CYCGRG 1 cut(s) 807
BsiSI CCGG 1 cut(s) 379
BslFI GGGAC 1 cut(s) 824
BslI CCNNNNNNNGG 4 cut(s) 378, 421, 807, 808
BsmAI GTCTC 1 cut(s) 337
BsmFI GGGAC 1 cut(s) 824
BsnI GGCC 3 cut(s) 770, 974, 995
Bso31I GGTCTC 1 cut(s) 337
BsoBI CYCGRG 1 cut(s) 807
Bsp143I GATC 1 cut(s) 1051
Bsp19I CCATGG 1 cut(s) 837
BspACI CCGC 1 cut(s) 98
BspANI GGCC 3 cut(s) 770, 974, 995
BspCNI CTCAG 3 cut(s) 604, 745, 862
BspLI GGNNCC 1 cut(s) 812
BspMAI CTGCAG 2 cut(s) 474, 910
BspMI ACCTGC 1 cut(s) 222
BspPI GGATC 1 cut(s) 1059
BspTNI GGTCTC 1 cut(s) 337
BsrDI GCAATG 1 cut(s) 107
BsrI ACTGG 2 cut(s) 211, 938
BssECI CCNNGG 4 cut(s) 317, 414, 771, 837
BssMI GATC 1 cut(s) 1051
BssT1I CCWWGG 2 cut(s) 317, 837
Bst2UI CCWGG 3 cut(s) 83, 416, 503
Bst4CI ACNGT 2 cut(s) 14, 949
Bst6I CTCTTC 1 cut(s) 855
BstC8I GCNNGC 1 cut(s) 750
BstDEI CTNAG 5 cut(s) 254, 443, 591, 753, 849
BstDSI CCRYGG 1 cut(s) 837
BstEII GGTNACC 1 cut(s) 209
BstF5I GGATG 5 cut(s) 71, 234, 577, 931, 967
BstKTI GATC 1 cut(s) 1054
BstMAI GTCTC 1 cut(s) 337
BstMBI GATC 1 cut(s) 1051
BstMWI GCNNNNNNNGC 2 cut(s) 179, 830
BstNI CCWGG 3 cut(s) 83, 416, 503
BstNSI RCATGY 2 cut(s) 343, 464
BstPI GGTNACC 1 cut(s) 209
BstSCI CCNGG 4 cut(s) 81, 378, 414, 501
BstSFI CTRYAG 2 cut(s) 470, 906
BstV1I GCAGC 1 cut(s) 820
BsuI GTATCC 3 cut(s) 739, 751, 925
BsuRI GGCC 3 cut(s) 770, 974, 995
BtgI CCRYGG 1 cut(s) 837
BtgZI GCGATG 1 cut(s) 339
BtsCI GGATG 5 cut(s) 71, 234, 577, 931, 967
BtsIMutI CAGTG 5 cut(s) 204, 306, 358, 884, 945
BveI ACCTGC 1 cut(s) 222
Cac8I GCNNGC 1 cut(s) 750
CaiI CAGNNNCTG 1 cut(s) 886
Cfr13I GGNCC 1 cut(s) 811
Csp6I GTAC 3 cut(s) 161, 376, 405
CspCI CAANNNNNGTGG 2 cut(s) 283, 318
CviAII CATG 4 cut(s) 137, 340, 461, 838
CviQI GTAC 3 cut(s) 161, 376, 405
DdeI CTNAG 5 cut(s) 254, 443, 591, 753, 849
DpnI GATC 1 cut(s) 1053
DpnII GATC 1 cut(s) 1051
EaeI YGGCCR 2 cut(s) 768, 972
Eam1104I CTCTTC 1 cut(s) 855
EarI CTCTTC 1 cut(s) 855
Eco130I CCWWGG 2 cut(s) 317, 837
Eco31I GGTCTC 1 cut(s) 337
Eco47I GGWCC 1 cut(s) 811
Eco57I CTGAAG 1 cut(s) 908
Eco88I CYCGRG 1 cut(s) 807
Eco91I GGTNACC 1 cut(s) 209
EcoO65I GGTNACC 1 cut(s) 209
EcoRI GAATTC 1 cut(s) 844
EcoRII CCWGG 3 cut(s) 81, 414, 501
EcoT14I CCWWGG 2 cut(s) 317, 837
EcoT22I ATGCAT 1 cut(s) 264
ErhI CCWWGG 2 cut(s) 317, 837
FaeI CATG 4 cut(s) 140, 343, 464, 841
FaqI GGGAC 1 cut(s) 824
FatI CATG 4 cut(s) 136, 339, 460, 837
FauI CCCGC 1 cut(s) 105
FblI GTMKAC 1 cut(s) 92
Fnu4HI GCNGC 1 cut(s) 834
FokI GGATG 5 cut(s) 58, 221, 584, 938, 974
Fsp4HI GCNGC 1 cut(s) 834
FspBI CTAG 2 cut(s) 35, 660
GluI GCNGC 1 cut(s) 834
GsuI CTGGAG 1 cut(s) 921
HaeIII GGCC 3 cut(s) 770, 974, 995
HapII CCGG 1 cut(s) 379
Hin1II CATG 4 cut(s) 140, 343, 464, 841
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HinfI GANTC 7 cut(s) 38, 290, 385, 482, 784, 853, 1043
HpaII CCGG 1 cut(s) 379
HphI GGTGA 1 cut(s) 853
Hpy166II GTNNAC 2 cut(s) 93, 407
Hpy188I TCNGA 1 cut(s) 852
Hpy188III TCNNGA 6 cut(s) 17, 35, 614, 809, 857, 1055
Hpy8I GTNNAC 2 cut(s) 93, 407
Hpy99I CGWCG 2 cut(s) 18, 94
HpyAV CCTTC 4 cut(s) 184, 472, 476, 622
HpyCH4III ACNGT 2 cut(s) 14, 949
HpyCH4IV ACGT 1 cut(s) 396
HpyF10VI GCNNNNNNNGC 2 cut(s) 179, 830
HpyF3I CTNAG 5 cut(s) 254, 443, 591, 753, 849
HpySE526I ACGT 1 cut(s) 396
Hsp92II CATG 4 cut(s) 140, 343, 464, 841
Kzo9I GATC 1 cut(s) 1051
LmnI GCTCC 1 cut(s) 124
Lsp1109I GCAGC 1 cut(s) 820
LweI GCATC 5 cut(s) 271, 435, 590, 596, 704
MaeI CTAG 2 cut(s) 35, 660
MaeII ACGT 1 cut(s) 396
MaeIII GTNAC 3 cut(s) 209, 418, 976
MalI GATC 1 cut(s) 1053
MboI GATC 1 cut(s) 1051
MboII GAAGA 3 cut(s) 487, 872, 1039
MfeI CAATTG 1 cut(s) 600
MluCI AATT 6 cut(s) 600, 740, 816, 844, 918, 987
MlyI GAGTC 3 cut(s) 491, 778, 847
MmeI TCCRAC 3 cut(s) 318, 337, 621
Mph1103I ATGCAT 1 cut(s) 264
MseI TTAA 5 cut(s) 393, 455, 567, 819, 951
MslI CAYNNNNRTG 1 cut(s) 239
MspA1I CMGCKG 2 cut(s) 595, 752
MspI CCGG 1 cut(s) 379
MspR9I CCNGG 4 cut(s) 83, 380, 416, 503
MunI CAATTG 1 cut(s) 600
MvaI CCWGG 3 cut(s) 83, 416, 503
MwoI GCNNNNNNNGC 2 cut(s) 179, 830
NciI CCSGG 1 cut(s) 380
NcoI CCATGG 1 cut(s) 837
NdeII GATC 1 cut(s) 1051
NlaIII CATG 4 cut(s) 140, 343, 464, 841
NlaIV GGNNCC 1 cut(s) 812
NmeAIII GCCGAG 1 cut(s) 796
NsiI ATGCAT 1 cut(s) 264
NspI RCATGY 2 cut(s) 343, 464
PciI ACATGT 2 cut(s) 339, 460
PcsI WCGNNNNNNNCGW 1 cut(s) 13
PfeI GAWTC 4 cut(s) 38, 290, 385, 1043
PkrI GCNGC 1 cut(s) 835
PleI GAGTC 3 cut(s) 490, 778, 847
PpsI GAGTC 3 cut(s) 490, 778, 847
PscI ACATGT 2 cut(s) 339, 460
PshBI ATTAAT 1 cut(s) 819
Psp6I CCWGG 3 cut(s) 81, 414, 501
PspEI GGTNACC 1 cut(s) 209
PspGI CCWGG 3 cut(s) 81, 414, 501
PspN4I GGNNCC 1 cut(s) 812
PspPI GGNCC 1 cut(s) 811
PstI CTGCAG 2 cut(s) 474, 910
PstNI CAGNNNCTG 1 cut(s) 886
PvuII CAGCTG 2 cut(s) 595, 752
RsaI GTAC 3 cut(s) 162, 377, 406
RsaNI GTAC 3 cut(s) 161, 376, 405
RseI CAYNNNNRTG 1 cut(s) 239
SalI GTCGAC 1 cut(s) 91
SaqAI TTAA 5 cut(s) 393, 455, 567, 819, 951
SatI GCNGC 1 cut(s) 834
Sau3AI GATC 1 cut(s) 1051
Sau96I GGNCC 1 cut(s) 811
SchI GAGTC 3 cut(s) 491, 778, 847
ScrFI CCNGG 4 cut(s) 83, 380, 416, 503
SfaNI GCATC 5 cut(s) 271, 435, 590, 596, 704
SfcI CTRYAG 2 cut(s) 470, 906
SinI GGWCC 1 cut(s) 811
SmiMI CAYNNNNRTG 1 cut(s) 239
Sse9I AATT 6 cut(s) 600, 740, 816, 844, 918, 987
SsiI CCGC 1 cut(s) 98
SspI AATATT 1 cut(s) 279
SspMI CTAG 2 cut(s) 35, 660
StyD4I CCNGG 4 cut(s) 81, 378, 414, 501
StyI CCWWGG 2 cut(s) 317, 837
TaaI ACNGT 2 cut(s) 14, 949
TaiI ACGT 1 cut(s) 399
TaqI TCGA 4 cut(s) 7, 16, 92, 626
TasI AATT 6 cut(s) 600, 740, 816, 844, 918, 987
TfiI GAWTC 4 cut(s) 38, 290, 385, 1043
Tru1I TTAA 5 cut(s) 393, 455, 567, 819, 951
Tru9I TTAA 5 cut(s) 393, 455, 567, 819, 951
TscAI CASTG 5 cut(s) 211, 313, 358, 891, 945
TseI GCWGC 1 cut(s) 833
TspDTI ATGAA 8 cut(s) 30, 153, 223, 377, 547, 981, 999, 1050
TspGWI ACGGA 1 cut(s) 776
TspRI CASTG 5 cut(s) 211, 313, 358, 891, 945
VpaK11BI GGWCC 1 cut(s) 811
VspI ATTAAT 1 cut(s) 819
XapI RAATTY 3 cut(s) 740, 844, 918
XbaI TCTAGA 1 cut(s) 34
XceI RCATGY 2 cut(s) 343, 464
XmiI GTMKAC 1 cut(s) 92
XspI CTAG 2 cut(s) 35, 660
Zsp2I ATGCAT 1 cut(s) 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.