RLG00000010492

Glycosyl hydrolase family 10

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0006231
Physical Location & Seq
Forward (+)
2085825 .. 2089686
3862 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010492

Sequence Viewer

Length: 2820 bp
ATGTGGACTCTCTTAGCCTTGTGCTGCAATCGTCTTAAGCATAAGCAAAAGCAGGACCATCCTCAGAGATCCAAAGAAGCCATGGAGAACCAAACGATTGAAAATGCCGCCGACGATAACCAGATTGTGAAACAGGACAAGGTTAATTCAAGTAGTAGTCATGGTACCAATATCATAGTGAACCATGATTTCTGTGGAGGGCTGCACTCTTGGCACCTCAATTGCTGTGAGGGATATGTAGTTTCAGCTGATTCTGGCCACCCACAAGTAAATTCGGGTGGCAATTATGCAGTTGTTACTAATCGGAAAGAAAGCTGGCAAGGATTGGAGCAGGATATCACTGGGAGGGTGTCCCCTGGTTTGACTTACTTGGTTTCGGCTTCTGTTGGGGTTTCGGGACCTCTCGTGGGATGTGTTGATGTCCTGGCAACATTGAAAATGGAATGCCAGGGTTCAGAAACTAAGTATTCGTTAGTTGGGAGAAGTCCTGTATCAAATGGGAAATGGGAAAAGTTGGAAGGCAAATTTTCACTGTCAACAATGCCTGATAAGGTTGTGTTTTACTTGGAAGGGCCTTCTCCTGGAATTGACTTGCTTATACAATCTGTAGTGATCTCTCGTTCCAATCCAAAGGGACAGCGGCACGGAAATGCCAGTGATGGAGATGAAGATATAGTCCTAAACCCAAAATTTGAGGATGGCTTGACTAATTGGACTGGAAGAGGCTGCAAGGTAGCTCTACACGACTCAATGGGAGATGGGAAAATTGTCCCTCAATCTGGAAAAGTTTTTGCTGCTGCAACAGAACGCACACAGAGCTGGAATGGCATTCAGCAGGATATTACTGGAAGAGTGCAACGAAAGCTAGCTTACGAGGCTACTGCTGTTGTCCGGATATTTGGTAACAATGTCACAAGTTCTGATGTACGGGCTACCTTATGGGTGCAGTCACCAAATGGTCGTGAACAGTATATTGGCATTTCTAAGGTACAGGCAACAGACAAGGATTGGGCACAGTTGAAGGGGAAATTCCTTTTAAACGGATCCCCATCCAAAGTAGTCGTTTATTTAGAAGGTCCACCAGCAGGAACTGATATTCTTGTCAACAGTTTCGTTGTCAAGCACGCACAGAAAGTCCCTCCTTCTTCTCAACCAGATATTGAGAATCCTGCTTTTGGAGTAAATATAATTGAGAACAGTAATCTAAGTAATGGCACCAATGGGTGGTTTCCTCTTGGTAATTGCACTTTGAGTGTGGGAACTGGTTCACCGCATATACTTCCTCCAATGGCGAGAGATAGCCTCGGCGCTCATGGACCTTTAAGTGGTCGCTTCATCCTTGTAACCAAGCGCACACAGACTTGGATGGGTCCTGCTCAGATGATTGGTGACAAATTGAAACTCTTTTTGACATATCAAGTATCTGCTTGGGTTCGGATTGGCGCTGGAGCAACTGGTCCACAAAATGTGAACGTTGCACTCGGTGTGGACAATCAGTGGGTGAACGGAGGGCAAGCTGAGGTGGGTGACAACAGATGGCATGAAATTGGTGGTTCCTTTAGAATTGAGAAGCAGCCATCCAAAGTTATGGTGTATATCCAAGGTCCTGCTTCAGGTGTAGACTTAATGGTTGCTGGACTTCAGATATTTCCTGTTGACAGACAAGCAAGATTTAGATACTTGAAGAGGCAGACTGAGAAGATCCGCAAGCGCGATGTTGTACTGAAATTTTCAGGATTAGACTGGAGCAGCGCATATGGCAGCTTTGTGAAAATTAAACAATCACAAAACAGTTTTCCATTTGGGACATGCATAAGCAGAACAAACATTGACAATGAAGATTTTGTTGATTTCTTCGTGAAAAACTTTAACTGGTCTGTATTTGGAAATGAACTGAAGTGGTATTGGACTGAACCTCAGAAGGGAAATTTCAATTACAAGGATGCCGATGAGATGGTGGACTTGTGCAAGAGTCACAACATAGATATGCGTGGCCATTGTATCTATTGGGAAGTGGTGGACACGGTCCAGCAATGGATCCGTTCATTGAGCCAAAATGACTTGGCAACTGCTGTCCAAAGTCGAGTAACAGACCTCCTCACCCGCTACAAAGGGAAGTTCCGGCACTATGATGTCAATAATGAGATGCTGCATGGTTCATTCTATCAAGACAAATTGGGTAAAGATATCCGAGCCAACATGTTCAAGATGGCAAACCAATTGGATCCATCTGCACTCCTATTTGTGAATGATTATCATGTCGAGGATGGATGTGATACCAGATCAGCACCAGAAAGGTACATTGAACAGATCCTTGATTTGCAACTACAAGGTGCCCCTGTTGGTGGGATTGGAATTCAAGGACATATAGACAGTCCAGTAGGTCCAATTGTTTGTTCCGCTCTTGATAAATTGGGTATCCTTGGCCTTCCAATCTGGTTCACAGAACTTGATGTGTCATCGAGCAATGAATACGTTCGTGCAGATGACTTGGAAGTGATGCTTAGGGAAGCATTTGCCAATCCTTCAGTAGAAGGCATAGTCCTGTGGGGTTTCTGGGAGCTGTTCATGAGTCGTGAAAACTCCCATCTAGTGAATGCCGAAGGGGACATCAACGAAGCTGGAAAGCGTTACTTGGAACTCAAGCAAGAGTGGCTATCTCATGCTCATGGGCACATTGATGAACAGGGACAGTTCACGTTTAGAGGCTTCCATGGAACATACAGTGTAGAGATTGCTACCCCCTCCAAGAAAGTTCTGAAGACATTTGTTGTTGACAAGGGTGATGACTCTCCATTTGAGGTTTCCATTGCTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBM_4_9 Glyco_hydro_10

Protein Analysis

940

Amino Acids

104.03

Weight (kDa)

6.2

Isoelectric Point (pI)

37.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBM_4_9 PF02018 57 - 193 2.7e-20 Carbohydrate binding domain
CBM_4_9 PF02018 224 - 362 1.5e-19 Carbohydrate binding domain
CBM_4_9 PF02018 395 - 538 1.2e-16 Carbohydrate binding domain
Glyco_hydro_10 PF00331 596 - 852 2.3e-46 Glycosyl hydrolase family 10
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 164
AccB1I GGYRCC 4 cut(s) 164, 213, 1214, 2333
AccB7I CCANNNNNTGG 1 cut(s) 1224
AccBSI CCGCTC 1 cut(s) 2402
AccI GTMKAC 1 cut(s) 1620
AccII CGCG 1 cut(s) 1713
AccIII TCCGGA 1 cut(s) 891
AciI CCGC 6 cut(s) 108, 640, 1271, 1705, 2104, 2400
AclI AACGTT 1 cut(s) 1473
AclWI GGATC 9 cut(s) 63, 1038, 1051, 1696, 2032, 2045, 2219, 2232, 2305
AcoI YGGCCR 2 cut(s) 256, 1993
AcsI RAATTY 7 cut(s) 271, 524, 689, 1028, 1727, 1927, 2355
AcuI CTGAAG 5 cut(s) 1596, 1625, 1916, 2511, 2780
AdeI CACNNNGTG 1 cut(s) 1484
AfaI GTAC 5 cut(s) 166, 927, 990, 1722, 2300
AflII CTTAAG 1 cut(s) 35
AflIII ACRYGT 1 cut(s) 2199
AjnI CCWGG 4 cut(s) 355, 423, 447, 580
AjuI GAANNNNNNNTTGG 4 cut(s) 957, 989, 2380, 2412
AlwI GGATC 9 cut(s) 63, 1038, 1051, 1696, 2032, 2045, 2219, 2232, 2305
AlwNI CAGNNNCTG 1 cut(s) 1091
Aor13HI TCCGGA 1 cut(s) 891
AoxI GGCC 4 cut(s) 256, 572, 1993, 2425
ApeKI GCWGC 9 cut(s) 24, 202, 726, 794, 797, 1573, 1749, 1761, 2149
ApoI RAATTY 7 cut(s) 271, 524, 689, 1028, 1727, 1927, 2355
ArsI GACNNNNNNTTYG 2 cut(s) 2780, 2812
Asp700I GAANNNNTTC 2 cut(s) 1264, 2475
Asp718I GGTACC 1 cut(s) 164
AspLEI GCGC 5 cut(s) 1310, 1353, 1445, 1713, 1754
AsuHPI GGTGA 7 cut(s) 942, 1260, 1400, 1513, 1538, 2092, 2795
AsuNHI GCTAGC 1 cut(s) 865
AvaII GGWCC 9 cut(s) 55, 398, 1076, 1316, 1370, 1457, 1604, 2026, 2384
BaeGI GKGCMC 3 cut(s) 1015, 2338, 2676
BalI TGGCCA 2 cut(s) 258, 1995
BamHI GGATCC 3 cut(s) 1043, 2037, 2224
BanI GGYRCC 4 cut(s) 164, 213, 1214, 2333
BauI CACGAG 1 cut(s) 404
BbsI GAAGAC 1 cut(s) 2768
BbvCI CCTCAGC 1 cut(s) 1518
BbvI GCAGC 9 cut(s) 11, 189, 713, 781, 784, 1585, 1761, 1773, 2136
BcgI CGANNNNNNTGC 2 cut(s) 863, 897
BciT130I CCWGG 4 cut(s) 357, 425, 449, 582
BciVI GTATCC 1 cut(s) 2429
BfaI CTAG 2 cut(s) 866, 2591
BfmI CTRYAG 1 cut(s) 606
BfoI RGCGCY 2 cut(s) 1311, 1446
BfrI CTTAAG 1 cut(s) 35
BfuI GTATCC 1 cut(s) 2429
Bme1390I CCNGG 4 cut(s) 357, 425, 449, 582
Bme18I GGWCC 9 cut(s) 55, 398, 1076, 1316, 1370, 1457, 1604, 2026, 2384
BmrFI CCNGG 4 cut(s) 357, 425, 449, 582
BmrI ACTGGG 1 cut(s) 351
BmsI GCATC 3 cut(s) 1933, 2136, 2490
BmtI GCTAGC 1 cut(s) 869
BmuI ACTGGG 1 cut(s) 351
BpiI GAAGAC 1 cut(s) 2768
BplI GAGNNNNNCTC 2 cut(s) 1287, 1319
BpmI CTGGAG 2 cut(s) 1467, 1765
Bpu10I CCTNAGC 2 cut(s) 1518, 2504
BpuEI CTTGAG 1 cut(s) 2627
BsaBI GATNNNNATC 1 cut(s) 1048
BsaJI CCNNGG 7 cut(s) 81, 355, 448, 1303, 1600, 2422, 2713
BsaWI WCCGGW 1 cut(s) 891
Bse1I ACTGG 9 cut(s) 346, 654, 721, 850, 1267, 1459, 1748, 1877, 2378
Bse3DI GCAATG 3 cut(s) 2039, 2473, 2808
Bse8I GATNNNNATC 1 cut(s) 1048
BseAI TCCGGA 1 cut(s) 891
BseBI CCWGG 4 cut(s) 357, 425, 449, 582
BseDI CCNNGG 7 cut(s) 81, 355, 448, 1303, 1600, 2422, 2713
BseJI GATNNNNATC 1 cut(s) 1048
BseMI GCAATG 3 cut(s) 2039, 2473, 2808
BseMII CTCAG 5 cut(s) 77, 1391, 1509, 1686, 1931
BseNI ACTGG 9 cut(s) 346, 654, 721, 850, 1267, 1459, 1748, 1877, 2378
BseRI GAGGAG 1 cut(s) 2087
BseSI GKGCMC 3 cut(s) 1015, 2338, 2676
BseXI GCAGC 9 cut(s) 11, 189, 713, 781, 784, 1585, 1761, 1773, 2136
BsgI GTGCAG 4 cut(s) 188, 965, 2217, 2502
Bsh1236I CGCG 1 cut(s) 1713
BshFI GGCC 4 cut(s) 258, 574, 1995, 2427
BshNI GGYRCC 4 cut(s) 164, 213, 1214, 2333
BsiSI CCGG 2 cut(s) 892, 2122
BslFI GGGAC 8 cut(s) 337, 411, 648, 755, 1121, 1819, 2621, 2703
BsmFI GGGAC 8 cut(s) 337, 411, 648, 755, 1121, 1819, 2621, 2703
BsmI GAATGC 3 cut(s) 449, 828, 2602
BsnI GGCC 4 cut(s) 258, 574, 1995, 2427
Bsp1286I GDGCHC 3 cut(s) 1015, 2338, 2676
Bsp13I TCCGGA 1 cut(s) 891
Bsp143I GATC 8 cut(s) 68, 612, 1043, 1701, 2037, 2224, 2282, 2310
Bsp19I CCATGG 2 cut(s) 81, 2713
BspACI CCGC 6 cut(s) 108, 640, 1271, 1705, 2104, 2400
BspANI GGCC 4 cut(s) 258, 574, 1995, 2427
BspCNI CTCAG 5 cut(s) 76, 1390, 1510, 1687, 1930
BspEI TCCGGA 1 cut(s) 891
BspFNI CGCG 1 cut(s) 1713
BspHI TCATGA 1 cut(s) 2568
BspOI GCTAGC 1 cut(s) 869
BspPI GGATC 9 cut(s) 63, 1038, 1051, 1696, 2032, 2045, 2219, 2232, 2305
BspT107I GGYRCC 4 cut(s) 164, 213, 1214, 2333
BspTI CTTAAG 1 cut(s) 35
BsrBI CCGCTC 1 cut(s) 2402
BsrDI GCAATG 3 cut(s) 2039, 2473, 2808
BsrI ACTGG 9 cut(s) 346, 654, 721, 850, 1267, 1459, 1748, 1877, 2378
BssECI CCNNGG 7 cut(s) 81, 355, 448, 1303, 1600, 2422, 2713
BssMI GATC 8 cut(s) 68, 612, 1043, 1701, 2037, 2224, 2282, 2310
BssSI CACGAG 1 cut(s) 404
BssT1I CCWWGG 4 cut(s) 81, 1600, 2422, 2713
Bst2BI CACGAG 1 cut(s) 404
Bst2UI CCWGG 4 cut(s) 357, 425, 449, 582
Bst6I CTCTTC 3 cut(s) 715, 844, 1679
BstAFI CTTAAG 1 cut(s) 35
BstC8I GCNNGC 5 cut(s) 317, 867, 1125, 1515, 1709
BstDSI CCRYGG 2 cut(s) 81, 2713
BstENI CCTNNNNNAGG 1 cut(s) 1611
BstFNI CGCG 1 cut(s) 1713
BstH2I RGCGCY 2 cut(s) 1311, 1446
BstHHI GCGC 5 cut(s) 1310, 1353, 1445, 1713, 1754
BstKTI GATC 8 cut(s) 71, 615, 1046, 1704, 2040, 2227, 2285, 2313
BstMBI GATC 8 cut(s) 68, 612, 1043, 1701, 2037, 2224, 2282, 2310
BstMWI GCNNNNNNNGC 7 cut(s) 211, 816, 825, 862, 875, 1758, 2653
BstNI CCWGG 4 cut(s) 357, 425, 449, 582
BstNSI RCATGY 2 cut(s) 1812, 2203
BstSCI CCNGG 4 cut(s) 355, 423, 447, 580
BstSFI CTRYAG 1 cut(s) 606
BstSLI GKGCMC 3 cut(s) 1015, 2338, 2676
BstUI CGCG 1 cut(s) 1713
BstV1I GCAGC 9 cut(s) 11, 189, 713, 781, 784, 1585, 1761, 1773, 2136
BstV2I GAAGAC 1 cut(s) 2768
BstX2I RGATCY 6 cut(s) 68, 1043, 1701, 2037, 2224, 2310
BstXI CCANNNNNNTGG 1 cut(s) 1588
BstYI RGATCY 6 cut(s) 68, 1043, 1701, 2037, 2224, 2310
BsuI GTATCC 1 cut(s) 2429
BsuRI GGCC 4 cut(s) 258, 574, 1995, 2427
BtgI CCRYGG 2 cut(s) 81, 2713
BtgZI GCGATG 1 cut(s) 1728
BtsIMutI CAGTG 5 cut(s) 339, 530, 661, 1502, 2731
Cac8I GCNNGC 5 cut(s) 317, 867, 1125, 1515, 1709
CaiI CAGNNNCTG 1 cut(s) 1091
CciI TCATGA 1 cut(s) 2568
CfoI GCGC 5 cut(s) 1310, 1353, 1445, 1713, 1754
Csp6I GTAC 5 cut(s) 165, 926, 989, 1721, 2299
CviQI GTAC 5 cut(s) 165, 926, 989, 1721, 2299
DpnI GATC 8 cut(s) 70, 614, 1045, 1703, 2039, 2226, 2284, 2312
DpnII GATC 8 cut(s) 68, 612, 1043, 1701, 2037, 2224, 2282, 2310
DraI TTTAAA 1 cut(s) 1038
DraIII CACNNNGTG 1 cut(s) 1484
EaeI YGGCCR 2 cut(s) 256, 1993
Eam1104I CTCTTC 3 cut(s) 715, 844, 1679
EarI CTCTTC 3 cut(s) 715, 844, 1679
Eco130I CCWWGG 4 cut(s) 81, 1600, 2422, 2713
Eco32I GATATC 2 cut(s) 337, 2188
Eco47I GGWCC 9 cut(s) 55, 398, 1076, 1316, 1370, 1457, 1604, 2026, 2384
Eco57I CTGAAG 5 cut(s) 1596, 1625, 1916, 2511, 2780
EcoNI CCTNNNNNAGG 1 cut(s) 1611
EcoO109I RGGNCCY 4 cut(s) 398, 572, 1370, 1604
EcoRI GAATTC 1 cut(s) 2355
EcoRII CCWGG 4 cut(s) 355, 423, 447, 580
EcoRV GATATC 2 cut(s) 337, 2188
EcoT14I CCWWGG 4 cut(s) 81, 1600, 2422, 2713
EcoT22I ATGCAT 1 cut(s) 1814
ErhI CCWWGG 4 cut(s) 81, 1600, 2422, 2713
FalI AAGNNNNNCTT 4 cut(s) 2487, 2519, 2618, 2650
FaqI GGGAC 8 cut(s) 337, 411, 648, 755, 1121, 1819, 2621, 2703
FauI CCCGC 1 cut(s) 2111
FauNDI CATATG 1 cut(s) 1756
FblI GTMKAC 1 cut(s) 1620
FspBI CTAG 2 cut(s) 866, 2591
GlaI GCGC 5 cut(s) 1309, 1352, 1444, 1712, 1753
GsuI CTGGAG 2 cut(s) 1467, 1765
HaeII RGCGCY 2 cut(s) 1311, 1446
HaeIII GGCC 4 cut(s) 258, 574, 1995, 2427
HapII CCGG 2 cut(s) 892, 2122
HhaI GCGC 5 cut(s) 1310, 1353, 1445, 1713, 1754
Hin6I GCGC 5 cut(s) 1308, 1351, 1443, 1711, 1752
HinP1I GCGC 5 cut(s) 1308, 1351, 1443, 1711, 1752
HincII GTYRAC 4 cut(s) 537, 1105, 1657, 2776
HindII GTYRAC 4 cut(s) 537, 1105, 1657, 2776
HinfI GANTC 7 cut(s) 7, 251, 746, 1165, 1972, 2572, 2789
HpaII CCGG 2 cut(s) 892, 2122
HphI GGTGA 7 cut(s) 942, 1260, 1400, 1513, 1538, 2092, 2795
Hpy99I CGWCG 1 cut(s) 116
HpyCH4IV ACGT 3 cut(s) 1473, 2475, 2699
HpyF10VI GCNNNNNNNGC 7 cut(s) 211, 816, 825, 862, 875, 1758, 2653
HpySE526I ACGT 3 cut(s) 1473, 2475, 2699
HspAI GCGC 5 cut(s) 1308, 1351, 1443, 1711, 1752
Kpn2I TCCGGA 1 cut(s) 891
KpnI GGTACC 1 cut(s) 168
Kzo9I GATC 8 cut(s) 68, 612, 1043, 1701, 2037, 2224, 2282, 2310
LmnI GCTCC 4 cut(s) 328, 1448, 1746, 2560
Lsp1109I GCAGC 9 cut(s) 11, 189, 713, 781, 784, 1585, 1761, 1773, 2136
LweI GCATC 3 cut(s) 1933, 2136, 2490
MaeI CTAG 2 cut(s) 866, 2591
MaeII ACGT 3 cut(s) 1473, 2475, 2699
MalI GATC 8 cut(s) 70, 614, 1045, 1703, 2039, 2226, 2284, 2312
MbiI CCGCTC 1 cut(s) 2402
MboI GATC 8 cut(s) 68, 612, 1043, 1701, 2037, 2224, 2282, 2310
MboII GAAGA 9 cut(s) 680, 732, 861, 1137, 1696, 1711, 1846, 1850, 2773
MfeI CAATTG 3 cut(s) 220, 2219, 2388
MflI RGATCY 6 cut(s) 68, 1043, 1701, 2037, 2224, 2310
MhlI GDGCHC 3 cut(s) 1015, 2338, 2676
MlsI TGGCCA 2 cut(s) 258, 1995
MluNI TGGCCA 2 cut(s) 258, 1995
MlyI GAGTC 4 cut(s) 740, 1981, 2581, 2783
MmeI TCCRAC 1 cut(s) 495
Mox20I TGGCCA 2 cut(s) 258, 1995
Mph1103I ATGCAT 1 cut(s) 1814
MroI TCCGGA 1 cut(s) 891
MroXI GAANNNNTTC 2 cut(s) 1264, 2475
MscI TGGCCA 2 cut(s) 258, 1995
MseI TTAA 7 cut(s) 36, 144, 1037, 1322, 1625, 1776, 1869
MslI CAYNNNNRTG 5 cut(s) 648, 1985, 2130, 2667, 2679
Msp20I TGGCCA 2 cut(s) 258, 1995
MspA1I CMGCKG 2 cut(s) 248, 640
MspCI CTTAAG 1 cut(s) 35
MspI CCGG 2 cut(s) 892, 2122
MspR9I CCNGG 4 cut(s) 357, 425, 449, 582
MunI CAATTG 3 cut(s) 220, 2219, 2388
Mva1269I GAATGC 3 cut(s) 449, 828, 2602
MvaI CCWGG 4 cut(s) 357, 425, 449, 582
MvnI CGCG 1 cut(s) 1713
MwoI GCNNNNNNNGC 7 cut(s) 211, 816, 825, 862, 875, 1758, 2653
NcoI CCATGG 2 cut(s) 81, 2713
NdeI CATATG 1 cut(s) 1756
NdeII GATC 8 cut(s) 68, 612, 1043, 1701, 2037, 2224, 2282, 2310
NheI GCTAGC 1 cut(s) 865
NmeAIII GCCGAG 1 cut(s) 1284
NmuCI GTSAC 5 cut(s) 910, 948, 1388, 1526, 1973
NsiI ATGCAT 1 cut(s) 1814
NspI RCATGY 2 cut(s) 1812, 2203
PagI TCATGA 1 cut(s) 2568
PciI ACATGT 1 cut(s) 2199
PctI GAATGC 3 cut(s) 449, 828, 2602
PdmI GAANNNNTTC 2 cut(s) 1264, 2475
PfeI GAWTC 2 cut(s) 251, 1165
PflFI GACNNNGTC 1 cut(s) 2024
PflMI CCANNNNNTGG 1 cut(s) 1224
PfoI TCCNGGA 1 cut(s) 580
PleI GAGTC 4 cut(s) 740, 1980, 2580, 2783
PpsI GAGTC 4 cut(s) 740, 1980, 2580, 2783
PpuMI RGGWCCY 3 cut(s) 398, 1370, 1604
PscI ACATGT 1 cut(s) 2199
Psp1406I AACGTT 1 cut(s) 1473
Psp5II RGGWCCY 3 cut(s) 398, 1370, 1604
Psp6I CCWGG 4 cut(s) 355, 423, 447, 580
PspGI CCWGG 4 cut(s) 355, 423, 447, 580
PspPPI RGGWCCY 3 cut(s) 398, 1370, 1604
PstNI CAGNNNCTG 1 cut(s) 1091
PsuI RGATCY 6 cut(s) 68, 1043, 1701, 2037, 2224, 2310
PsyI GACNNNGTC 1 cut(s) 2024
PvuII CAGCTG 1 cut(s) 248
RsaI GTAC 5 cut(s) 166, 927, 990, 1722, 2300
RsaNI GTAC 5 cut(s) 165, 926, 989, 1721, 2299
RseI CAYNNNNRTG 5 cut(s) 648, 1985, 2130, 2667, 2679
SaqAI TTAA 7 cut(s) 36, 144, 1037, 1322, 1625, 1776, 1869
Sau3AI GATC 8 cut(s) 68, 612, 1043, 1701, 2037, 2224, 2282, 2310
SchI GAGTC 4 cut(s) 740, 1981, 2581, 2783
ScrFI CCNGG 4 cut(s) 357, 425, 449, 582
SduI GDGCHC 3 cut(s) 1015, 2338, 2676
SfaNI GCATC 3 cut(s) 1933, 2136, 2490
SfcI CTRYAG 1 cut(s) 606
SinI GGWCC 9 cut(s) 55, 398, 1076, 1316, 1370, 1457, 1604, 2026, 2384
SmiMI CAYNNNNRTG 5 cut(s) 648, 1985, 2130, 2667, 2679
SmlI CTYRAG 2 cut(s) 35, 2642
SmoI CTYRAG 2 cut(s) 35, 2642
SsiI CCGC 6 cut(s) 108, 640, 1271, 1705, 2104, 2400
SspMI CTAG 2 cut(s) 866, 2591
StyD4I CCNGG 4 cut(s) 355, 423, 447, 580
StyI CCWWGG 4 cut(s) 81, 1600, 2422, 2713
TaiI ACGT 3 cut(s) 1476, 2478, 2702
TaqI TCGA 3 cut(s) 2083, 2262, 2462
TatI WGTACW 1 cut(s) 1720
TauI GCSGC 2 cut(s) 110, 643
TfiI GAWTC 2 cut(s) 251, 1165
Tru1I TTAA 7 cut(s) 36, 144, 1037, 1322, 1625, 1776, 1869
Tru9I TTAA 7 cut(s) 36, 144, 1037, 1322, 1625, 1776, 1869
TscAI CASTG 5 cut(s) 346, 537, 661, 1502, 2731
TseFI GTSAC 5 cut(s) 910, 948, 1388, 1526, 1973
TseI GCWGC 9 cut(s) 24, 202, 726, 794, 797, 1573, 1749, 1761, 2149
Tsp45I GTSAC 5 cut(s) 910, 948, 1388, 1526, 1973
TspGWI ACGGA 4 cut(s) 660, 1056, 1521, 2030
TspRI CASTG 5 cut(s) 346, 537, 661, 1502, 2731
Tth111I GACNNNGTC 1 cut(s) 2024
Van91I CCANNNNNTGG 1 cut(s) 1224
Vha464I CTTAAG 1 cut(s) 35
VpaK11BI GGWCC 9 cut(s) 55, 398, 1076, 1316, 1370, 1457, 1604, 2026, 2384
XagI CCTNNNNNAGG 1 cut(s) 1611
XapI RAATTY 7 cut(s) 271, 524, 689, 1028, 1727, 1927, 2355
XceI RCATGY 2 cut(s) 1812, 2203
XcmI CCANNNNNNNNNTGG 2 cut(s) 79, 191
XmiI GTMKAC 1 cut(s) 1620
XmnI GAANNNNTTC 2 cut(s) 1264, 2475
XspI CTAG 2 cut(s) 866, 2591
Zsp2I ATGCAT 1 cut(s) 1814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.