Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0006231

Physical Location & Seq

Genomic Coordinates Reverse (-)

66955276 .. 66959614

Gene Structure 4339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG493200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGGAGAACCAAACGATTGAAAATGCCGCCGACGATAACCAGATTGTGAAACAGGATATGGTTAATTCAAGTAGTAGTCATGGTACCAATATCATAGTGAACCATGATTTCTGTGGAGGGCTGCACTCTTGGCACCCCAATTGCTGTGAGGGATATGTAGTTTCAGCTGATTCTGGCCACCCACAAGCAAATTCGGGTGGCAATTATGCAGTTGTTACTAATCGGAAAGAATGCTGGCAAGGATTGGAGCAGGATATCACTGGGAGGGTGTCCCCTGGTTTGACTTACTTGGTTTCGGCTTCTGTTGGGGTTTCCGGACCTCTCGTGGGATGTGTTGATGTCCTGGCAACATTGAAAATGGAATGCCAGGGTTCAGAAACTAAGTATTCGTTAGTTGGGAGAAGTTCTGTATCAAATGGGAAATGGGAAAAGTTGGAAGGCAAATTTTCACTGTCAACAATGCCTGATAAGGTTGTGTTTTACTTGGAAGGGCCTTCTCCTGGAATTGACTTGCTTATACAATCTGTAGTGATCTCTTGTTCCAATCCAAAGGGACGGCGGCACGGAAATGCCAGTGATGGAGATGAAGATATAGTCCTAAACCCAAAATTTGAGGATGGCTTGACTAATTGGACTGGAAGAGGCTGCAAGGTAGTCCTACACGGCTCGATGGGAGATGGGAAAATCGTCCCTCAATCTGGAAAAGTTTTTGCTGCTGCAACAGAACGCACACAGAGCTGGAATGGCATTCAGCAGGATATTACTGGAAGAGTGCAACGAAAGCTAGCTTACGAGGCCACTGCTGTTGTCCGGATATTTGGTAACAATGTCACGAGTTCTGATGTACGGGCTACCTTATGGGTGCAGTCACCAAATGGTCGTGAACAGTATATTGGCATTTCTAATGTACAGGCAACGGACAAGGATTGGGCACAGTTGAAGGGGAAATTCCTTTTAAACGGATCCCCATCCAAAGTAGTCGTTTATTTAGAAGGTCCACCAGCAGGAACTGATATTCTTGTCAACAGTTTCGTTGTCAAGCATGCACAGAAAGTCCCTCCTTCTTTTCCACCAGATATTGAGAATCCTGCTTTTGGAGTAAATATAATTGAGAACAGTAATCTAAGTAATGGCACCAATGGGTGGTTTCCTCTTGGTAATTGCACTTTGAGTGTGGGAACTGGTTCACCGCATATACTTCCTCCAATGGCGAGAGATAGCCTTGGCGCTCATGAACCTTTAAGTGGTCGCTTCATCCTTGTAACCAAGCGCACACAGACTTGGATGGGTCCTGCTCAGATGATTGGTGACAAATTGAAACTCTTTTTGACATATCAAGTATCTGCTTGGGTTCGGATTGGCGCTGGAGCAACTGGTCCACAAAATGTGAACGTTGCACTCGGTGTGGACAATCAGTGGGTGAACGGAGGGCAAGCTGAGGTGGGGGACAACAGATGGCATGAAATTGGTGGTTCCTTTAGAATTGAGAAGCAGCCATCCAAAGTTATGGTGTATATCCAAGGCCCTGCTTCAGGTGTAGACTTAATGGTTGCTGGACTTCAGATATTTCCTGTTGACAGACAAGCAAGATTTAGATACTTGAAGAGGCAGACTGAGAAGATCCGTAAGCGCGATGTTGTCCTGAAATTTTCAGGATTAGACTGGAGCAGTGCATATGGCAGCTTCGTGAAAATTAAACAATCACAAAACAGTTTTCCATTTGGGACATGCATAAGCAGAACAAACATTGACAATGAAGATTTTGTTGATTTCTTCGTGAAAAACTTTAACTGGTCTGTATTTGGAAATGAACTGAAGTGGTATTGGACTGAACCTCAGAAGGGAAATTTCAATTACAAGGATGCCGATGAGATGGTGGACTTGTGCAAGAGTCACAACATAGATATGCGTGGCCATTGTATCTATTGGGAAGTGGTGGACACGGTCCAGCAATGGATCCGTTCATTGAGCCAAAATGACTTGGCAACTGCTGTCCAAAGTCGAGTAACAGACCTCGTCACCCGCTACAAAGGGAAGTTCAGGCACTATGATGTCAATAATGAGATGCTGCATGGTTCATTCTATCAAGACAAATTGGGTAAAGATATCCGAGCCAACATGTTCAAGATGGCAAACCAATTGGATCCATCTGCACTCCTATTTGTGAATGATTATCATGTCGAGGATGGATGTGATACCAGATCAGCACCAGAAAAGTACATTGAACAGATCCTTGATTTGCAACTACAAGGTGCCCCTGTTGGTGGGATTGGAATTCAAGGACATATAGATAGTCCAGTAGGTCCAATTGTTTGTTCCGCTCTTGATAAATTGGGTATCCTTGGCCTTCCAATCTGGTTCACAGAACTTGATGTGTCATCGAGCAATGAATGTGTTCGTGCAGATGACTTGGAAGTGATGCTTAGGGAAGCATTTGCCAATCCTTCAGTAGAAGGCATAGTCCTGTGGGGTTTCTGGGAGCTGTTCATGAGTCGTGAAAACTCCCATCTAGTGAATGCCGAAGGCGACATCAACGAAGCTGGAAAGCGTTACTTGGAACTTAAGCAAGAGTGGCTATCTCATGCTCATGGGCACATTGATGAACAGGGACAGTTCACGTTTAGAGGCTTCCATGGAACATACAGTGTAGAGATTGCTACCCCCTCCAAGAAAGTTCTGAAGACATTTGTTGTTGACAAGGGTGATGACTCTCCATTTGAGGTTTCCATTGCTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM_4_9 Glyco_hydro_10

Protein Analysis

912

Amino Acids

100.68

Weight (kDa)

5.81

Isoelectric Point (pI)

37.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBM_4_9	PF02018	30 - 166	1.2e-20	Carbohydrate binding domain
CBM_4_9	PF02018	197 - 335	1e-19	Carbohydrate binding domain
CBM_4_9	PF02018	368 - 511	1e-16	Carbohydrate binding domain
Glyco_hydro_10	PF00331	569 - 825	9.4e-47	Glycosyl hydrolase family 10

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006231)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58370 AT1G58370 AT4G08160 AT4G08160
fragaria_vesca	FvH4_2g32390 FvH4_2g32390 FvH4_2g32390 FvH4_2g32390
malus_domestica	MD08G1075100.v1.1 MD15G1062600.v1.1
prunus_persica	Prupe.1G416600_v2.0.a1 Prupe.1G416600_v2.0.a1 Prupe.1G416600_v2.0.a1
pyrus_communis	pycom08g06190 pycom15g05930
rosa_chinensis	RchiOBHm_Chr6g0310311
rosa_laevigata	RLG00000010492
rosa_multiflora	Rmu_sc0002348.1_g000014
rosa_roxburghii	Rroxscaffold_7G00158670
rosa_rugosa	Rorug06G0378800 Rorug06G0378900 Rorug06G0379000
rosa_samantha	Rh6AG493200 Rh6BG502800 Rh6CG507800 Rh6DG493900
rosa_wichuraiana	Rw6G042910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	83
AccB1I	GGYRCC	4 cut(s)	83, 132, 1133, 2252
AccB7I	CCANNNNNTGG	1 cut(s)	1143
AccBSI	CCGCTC	1 cut(s)	2321
AccI	GTMKAC	1 cut(s)	1539
AccII	CGCG	1 cut(s)	1632
AccIII	TCCGGA	2 cut(s)	314, 810
AciI	CCGC	5 cut(s)	27, 559, 1190, 2023, 2319
AclI	AACGTT	1 cut(s)	1392
AclWI	GGATC	8 cut(s)	957, 970, 1615, 1951, 1964, 2138, 2151, 2224
AcoI	YGGCCR	2 cut(s)	175, 1912
AcsI	RAATTY	7 cut(s)	190, 443, 608, 947, 1646, 1846, 2274
AcuI	CTGAAG	5 cut(s)	1515, 1544, 1835, 2430, 2699
AdeI	CACNNNGTG	1 cut(s)	1403
AfaI	GTAC	4 cut(s)	85, 846, 909, 2219
AflII	CTTAAG	1 cut(s)	2561
AflIII	ACRYGT	1 cut(s)	2118
AjnI	CCWGG	4 cut(s)	274, 342, 366, 499
AjuI	GAANNNNNNNTTGG	4 cut(s)	876, 908, 2299, 2331
AluBI	AGCT	8 cut(s)	167, 738, 784, 788, 1436, 1683, 2482, 2540
AluI	AGCT	8 cut(s)	167, 738, 784, 788, 1436, 1683, 2482, 2540
AlwI	GGATC	8 cut(s)	957, 970, 1615, 1951, 1964, 2138, 2151, 2224
AlwNI	CAGNNNCTG	1 cut(s)	1010
Aor13HI	TCCGGA	2 cut(s)	314, 810
AoxI	GGCC	6 cut(s)	175, 491, 795, 1522, 1912, 2344
ApeKI	GCWGC	7 cut(s)	121, 645, 713, 716, 1492, 1680, 2068
ApoI	RAATTY	7 cut(s)	190, 443, 608, 947, 1646, 1846, 2274
ArsI	GACNNNNNNTTYG	2 cut(s)	2699, 2731
Asp700I	GAANNNNTTC	2 cut(s)	1183, 2394
Asp718I	GGTACC	1 cut(s)	83
AspLEI	GCGC	4 cut(s)	1229, 1272, 1364, 1632
AspS9I	GGNCC	8 cut(s)	317, 491, 995, 1289, 1376, 1523, 1945, 2303
AsuHPI	GGTGA	6 cut(s)	861, 1179, 1319, 1432, 2011, 2714
AsuNHI	GCTAGC	1 cut(s)	784
AvaII	GGWCC	6 cut(s)	317, 995, 1289, 1376, 1945, 2303
BaeGI	GKGCMC	3 cut(s)	934, 2257, 2595
BalI	TGGCCA	2 cut(s)	177, 1914
BamHI	GGATCC	3 cut(s)	962, 1956, 2143
BanI	GGYRCC	4 cut(s)	83, 132, 1133, 2252
BauI	CACGAG	2 cut(s)	323, 832
BbsI	GAAGAC	1 cut(s)	2687
BbvCI	CCTCAGC	1 cut(s)	1437
BbvI	GCAGC	7 cut(s)	108, 632, 700, 703, 1504, 1692, 2055
BceAI	ACGGC	2 cut(s)	572, 679
BcgI	CGANNNNNNTGC	2 cut(s)	782, 816
BciT130I	CCWGG	4 cut(s)	276, 344, 368, 501
BciVI	GTATCC	1 cut(s)	2348
BfaI	CTAG	2 cut(s)	785, 2510
BfmI	CTRYAG	1 cut(s)	525
BfoI	RGCGCY	2 cut(s)	1230, 1365
BfrI	CTTAAG	1 cut(s)	2561
BfuI	GTATCC	1 cut(s)	2348
BisI	GCNGC	9 cut(s)	27, 122, 560, 646, 714, 717, 1493, 1681, 2069
BlsI	GCNGC	9 cut(s)	28, 123, 561, 647, 715, 718, 1494, 1682, 2070
Bme1390I	CCNGG	4 cut(s)	276, 344, 368, 501
Bme18I	GGWCC	6 cut(s)	317, 995, 1289, 1376, 1945, 2303
BmgT120I	GGNCC	8 cut(s)	317, 491, 995, 1289, 1376, 1523, 1945, 2303
BmiI	GGNNCC	9 cut(s)	85, 134, 964, 1135, 1290, 1474, 1958, 2145, 2254
BmrFI	CCNGG	4 cut(s)	276, 344, 368, 501
BmrI	ACTGGG	1 cut(s)	270
BmsI	GCATC	3 cut(s)	1852, 2055, 2409
BmtI	GCTAGC	1 cut(s)	788
BmuI	ACTGGG	1 cut(s)	270
BpiI	GAAGAC	1 cut(s)	2687
BpmI	CTGGAG	2 cut(s)	1386, 1684
Bpu10I	CCTNAGC	2 cut(s)	1437, 2423
BsaBI	GATNNNNATC	1 cut(s)	967
BsaJI	CCNNGG	6 cut(s)	274, 367, 1222, 1519, 2341, 2632
BsaWI	WCCGGW	2 cut(s)	314, 810
Bse1I	ACTGG	9 cut(s)	265, 573, 640, 769, 1186, 1378, 1667, 1796, 2297
Bse3DI	GCAATG	3 cut(s)	1958, 2392, 2727
Bse8I	GATNNNNATC	1 cut(s)	967
BseAI	TCCGGA	2 cut(s)	314, 810
BseBI	CCWGG	4 cut(s)	276, 344, 368, 501
BseDI	CCNNGG	6 cut(s)	274, 367, 1222, 1519, 2341, 2632
BseGI	GGATG	9 cut(s)	335, 622, 968, 1254, 1290, 1496, 1867, 2191, 2195
BseJI	GATNNNNATC	1 cut(s)	967
BseMI	GCAATG	3 cut(s)	1958, 2392, 2727
BseMII	CTCAG	4 cut(s)	1310, 1428, 1605, 1850
BseNI	ACTGG	9 cut(s)	265, 573, 640, 769, 1186, 1378, 1667, 1796, 2297
BseSI	GKGCMC	3 cut(s)	934, 2257, 2595
BseXI	GCAGC	7 cut(s)	108, 632, 700, 703, 1504, 1692, 2055
BsgI	GTGCAG	4 cut(s)	107, 884, 2136, 2421
Bsh1236I	CGCG	1 cut(s)	1632
BshFI	GGCC	6 cut(s)	177, 493, 797, 1524, 1914, 2346
BshNI	GGYRCC	4 cut(s)	83, 132, 1133, 2252
BsiSI	CCGG	2 cut(s)	315, 811
BslFI	GGGAC	7 cut(s)	256, 567, 674, 1040, 1460, 1738, 2622
BsmFI	GGGAC	7 cut(s)	256, 567, 674, 1040, 1460, 1738, 2622
BsmI	GAATGC	4 cut(s)	236, 368, 747, 2521
BsnI	GGCC	6 cut(s)	177, 493, 797, 1524, 1914, 2346
Bsp1286I	GDGCHC	3 cut(s)	934, 2257, 2595
Bsp13I	TCCGGA	2 cut(s)	314, 810
Bsp1407I	TGTACA	1 cut(s)	907
Bsp143I	GATC	7 cut(s)	531, 962, 1620, 1956, 2143, 2201, 2229
Bsp19I	CCATGG	1 cut(s)	2632
BspACI	CCGC	5 cut(s)	27, 559, 1190, 2023, 2319
BspANI	GGCC	6 cut(s)	177, 493, 797, 1524, 1914, 2346
BspCNI	CTCAG	4 cut(s)	1309, 1429, 1606, 1849
BspEI	TCCGGA	2 cut(s)	314, 810
BspFNI	CGCG	1 cut(s)	1632
BspHI	TCATGA	2 cut(s)	1231, 2487
BspLI	GGNNCC	9 cut(s)	85, 134, 964, 1135, 1290, 1474, 1958, 2145, 2254
BspOI	GCTAGC	1 cut(s)	788
BspPI	GGATC	8 cut(s)	957, 970, 1615, 1951, 1964, 2138, 2151, 2224
BspT107I	GGYRCC	4 cut(s)	83, 132, 1133, 2252
BspTI	CTTAAG	1 cut(s)	2561
BsrBI	CCGCTC	1 cut(s)	2321
BsrDI	GCAATG	3 cut(s)	1958, 2392, 2727
BsrGI	TGTACA	1 cut(s)	907
BsrI	ACTGG	9 cut(s)	265, 573, 640, 769, 1186, 1378, 1667, 1796, 2297
BssECI	CCNNGG	6 cut(s)	274, 367, 1222, 1519, 2341, 2632
BssMI	GATC	7 cut(s)	531, 962, 1620, 1956, 2143, 2201, 2229
BssSI	CACGAG	2 cut(s)	323, 832
BssT1I	CCWWGG	4 cut(s)	1222, 1519, 2341, 2632
Bst2BI	CACGAG	2 cut(s)	323, 832
Bst2UI	CCWGG	4 cut(s)	276, 344, 368, 501
Bst4CI	ACNGT	9 cut(s)	453, 888, 936, 1028, 1118, 1712, 1945, 2613, 2645
Bst6I	CTCTTC	3 cut(s)	634, 763, 1598
BstAFI	CTTAAG	1 cut(s)	2561
BstAUI	TGTACA	1 cut(s)	907
BstC8I	GCNNGC	4 cut(s)	236, 786, 1044, 1434
BstDEI	CTNAG	7 cut(s)	381, 1124, 1296, 1437, 1614, 1836, 2423
BstDSI	CCRYGG	1 cut(s)	2632
BstENI	CCTNNNNNAGG	1 cut(s)	1530
BstF5I	GGATG	9 cut(s)	335, 622, 968, 1254, 1290, 1496, 1867, 2191, 2195
BstFNI	CGCG	1 cut(s)	1632
BstH2I	RGCGCY	2 cut(s)	1230, 1365
BstHHI	GCGC	4 cut(s)	1229, 1272, 1364, 1632
BstKTI	GATC	7 cut(s)	534, 965, 1623, 1959, 2146, 2204, 2232
BstMBI	GATC	7 cut(s)	531, 962, 1620, 1956, 2143, 2201, 2229
BstMWI	GCNNNNNNNGC	6 cut(s)	130, 735, 744, 781, 794, 2572
BstNI	CCWGG	4 cut(s)	276, 344, 368, 501
BstNSI	RCATGY	3 cut(s)	1046, 1731, 2122
BstSCI	CCNGG	4 cut(s)	274, 342, 366, 499
BstSFI	CTRYAG	1 cut(s)	525
BstSLI	GKGCMC	3 cut(s)	934, 2257, 2595
BstUI	CGCG	1 cut(s)	1632
BstV1I	GCAGC	7 cut(s)	108, 632, 700, 703, 1504, 1692, 2055
BstV2I	GAAGAC	1 cut(s)	2687
BstX2I	RGATCY	5 cut(s)	962, 1620, 1956, 2143, 2229
BstXI	CCANNNNNNTGG	1 cut(s)	1507
BstYI	RGATCY	5 cut(s)	962, 1620, 1956, 2143, 2229
BsuI	GTATCC	1 cut(s)	2348
BsuRI	GGCC	6 cut(s)	177, 493, 797, 1524, 1914, 2346
BtgI	CCRYGG	1 cut(s)	2632
BtgZI	GCGATG	1 cut(s)	1647
BtsCI	GGATG	9 cut(s)	335, 622, 968, 1254, 1290, 1496, 1867, 2191, 2195
BtsI	GCAGTG	2 cut(s)	798, 1675
BtsIMutI	CAGTG	7 cut(s)	258, 449, 580, 798, 1421, 1675, 2650
Cac8I	GCNNGC	4 cut(s)	236, 786, 1044, 1434
CaiI	CAGNNNCTG	1 cut(s)	1010
CciI	TCATGA	2 cut(s)	1231, 2487
CfoI	GCGC	4 cut(s)	1229, 1272, 1364, 1632
Cfr13I	GGNCC	8 cut(s)	317, 491, 995, 1289, 1376, 1523, 1945, 2303
Csp6I	GTAC	4 cut(s)	84, 845, 908, 2218
CspCI	CAANNNNNGTGG	2 cut(s)	787, 822
CviQI	GTAC	4 cut(s)	84, 845, 908, 2218
DdeI	CTNAG	7 cut(s)	381, 1124, 1296, 1437, 1614, 1836, 2423
DpnI	GATC	7 cut(s)	533, 964, 1622, 1958, 2145, 2203, 2231
DpnII	GATC	7 cut(s)	531, 962, 1620, 1956, 2143, 2201, 2229
DraI	TTTAAA	1 cut(s)	957
DraIII	CACNNNGTG	1 cut(s)	1403
EaeI	YGGCCR	2 cut(s)	175, 1912
Eam1104I	CTCTTC	3 cut(s)	634, 763, 1598
EarI	CTCTTC	3 cut(s)	634, 763, 1598
Eco130I	CCWWGG	4 cut(s)	1222, 1519, 2341, 2632
Eco32I	GATATC	2 cut(s)	256, 2107
Eco47I	GGWCC	6 cut(s)	317, 995, 1289, 1376, 1945, 2303
Eco57I	CTGAAG	5 cut(s)	1515, 1544, 1835, 2430, 2699
EcoNI	CCTNNNNNAGG	1 cut(s)	1530
EcoO109I	RGGNCCY	3 cut(s)	491, 1289, 1523
EcoRI	GAATTC	1 cut(s)	2274
EcoRII	CCWGG	4 cut(s)	274, 342, 366, 499
EcoRV	GATATC	2 cut(s)	256, 2107
EcoT14I	CCWWGG	4 cut(s)	1222, 1519, 2341, 2632
EcoT22I	ATGCAT	1 cut(s)	1733
ErhI	CCWWGG	4 cut(s)	1222, 1519, 2341, 2632
FalI	AAGNNNNNCTT	4 cut(s)	2406, 2438, 2537, 2569
FaqI	GGGAC	7 cut(s)	256, 567, 674, 1040, 1460, 1738, 2622
FauI	CCCGC	1 cut(s)	2030
FauNDI	CATATG	1 cut(s)	1675
FblI	GTMKAC	1 cut(s)	1539
Fnu4HI	GCNGC	9 cut(s)	27, 122, 560, 646, 714, 717, 1493, 1681, 2069
FokI	GGATG	9 cut(s)	342, 629, 955, 1241, 1297, 1483, 1874, 2198, 2202
Fsp4HI	GCNGC	9 cut(s)	27, 122, 560, 646, 714, 717, 1493, 1681, 2069
FspBI	CTAG	2 cut(s)	785, 2510
GlaI	GCGC	4 cut(s)	1228, 1271, 1363, 1631
GluI	GCNGC	9 cut(s)	27, 122, 560, 646, 714, 717, 1493, 1681, 2069
GsuI	CTGGAG	2 cut(s)	1386, 1684
HaeII	RGCGCY	2 cut(s)	1230, 1365
HaeIII	GGCC	6 cut(s)	177, 493, 797, 1524, 1914, 2346
HapII	CCGG	2 cut(s)	315, 811
HhaI	GCGC	4 cut(s)	1229, 1272, 1364, 1632
Hin6I	GCGC	4 cut(s)	1227, 1270, 1362, 1630
HinP1I	GCGC	4 cut(s)	1227, 1270, 1362, 1630
HincII	GTYRAC	4 cut(s)	456, 1024, 1576, 2695
HindII	GTYRAC	4 cut(s)	456, 1024, 1576, 2695
HinfI	GANTC	5 cut(s)	170, 1084, 1891, 2491, 2708
HpaII	CCGG	2 cut(s)	315, 811
HphI	GGTGA	6 cut(s)	861, 1179, 1319, 1432, 2011, 2714
Hpy188I	TCNGA	9 cut(s)	225, 376, 841, 1299, 1356, 1563, 1839, 2111, 2679
Hpy99I	CGWCG	1 cut(s)	35
HpyCH4III	ACNGT	9 cut(s)	453, 888, 936, 1028, 1118, 1712, 1945, 2613, 2645
HpyCH4IV	ACGT	2 cut(s)	1392, 2618
HpyF10VI	GCNNNNNNNGC	6 cut(s)	130, 735, 744, 781, 794, 2572
HpyF3I	CTNAG	7 cut(s)	381, 1124, 1296, 1437, 1614, 1836, 2423
HpySE526I	ACGT	2 cut(s)	1392, 2618
HspAI	GCGC	4 cut(s)	1227, 1270, 1362, 1630
Kpn2I	TCCGGA	2 cut(s)	314, 810
KpnI	GGTACC	1 cut(s)	87
Kzo9I	GATC	7 cut(s)	531, 962, 1620, 1956, 2143, 2201, 2229
LmnI	GCTCC	4 cut(s)	247, 1367, 1665, 2479
Lsp1109I	GCAGC	7 cut(s)	108, 632, 700, 703, 1504, 1692, 2055
LweI	GCATC	3 cut(s)	1852, 2055, 2409
MaeI	CTAG	2 cut(s)	785, 2510
MaeII	ACGT	2 cut(s)	1392, 2618
MalI	GATC	7 cut(s)	533, 964, 1622, 1958, 2145, 2203, 2231
MbiI	CCGCTC	1 cut(s)	2321
MboI	GATC	7 cut(s)	531, 962, 1620, 1956, 2143, 2201, 2229
MboII	GAAGA	8 cut(s)	599, 651, 780, 1615, 1630, 1765, 1769, 2692
MfeI	CAATTG	3 cut(s)	139, 2138, 2307
MflI	RGATCY	5 cut(s)	962, 1620, 1956, 2143, 2229
MhlI	GDGCHC	3 cut(s)	934, 2257, 2595
MlsI	TGGCCA	2 cut(s)	177, 1914
MluNI	TGGCCA	2 cut(s)	177, 1914
MlyI	GAGTC	3 cut(s)	1900, 2500, 2702
MmeI	TCCRAC	1 cut(s)	414
Mox20I	TGGCCA	2 cut(s)	177, 1914
Mph1103I	ATGCAT	1 cut(s)	1733
MroI	TCCGGA	2 cut(s)	314, 810
MroXI	GAANNNNTTC	2 cut(s)	1183, 2394
MscI	TGGCCA	2 cut(s)	177, 1914
MseI	TTAA	7 cut(s)	63, 956, 1241, 1544, 1695, 1788, 2562
MslI	CAYNNNNRTG	5 cut(s)	567, 1904, 2049, 2586, 2598
Msp20I	TGGCCA	2 cut(s)	177, 1914
MspA1I	CMGCKG	1 cut(s)	167
MspCI	CTTAAG	1 cut(s)	2561
MspI	CCGG	2 cut(s)	315, 811
MspR9I	CCNGG	4 cut(s)	276, 344, 368, 501
MunI	CAATTG	3 cut(s)	139, 2138, 2307
Mva1269I	GAATGC	4 cut(s)	236, 368, 747, 2521
MvaI	CCWGG	4 cut(s)	276, 344, 368, 501
MvnI	CGCG	1 cut(s)	1632
MwoI	GCNNNNNNNGC	6 cut(s)	130, 735, 744, 781, 794, 2572
NcoI	CCATGG	1 cut(s)	2632
NdeI	CATATG	1 cut(s)	1675
NdeII	GATC	7 cut(s)	531, 962, 1620, 1956, 2143, 2201, 2229
NheI	GCTAGC	1 cut(s)	784
NlaIV	GGNNCC	9 cut(s)	85, 134, 964, 1135, 1290, 1474, 1958, 2145, 2254
NmuCI	GTSAC	5 cut(s)	829, 867, 1307, 1892, 2017
NsiI	ATGCAT	1 cut(s)	1733
NspI	RCATGY	3 cut(s)	1046, 1731, 2122
PaeI	GCATGC	1 cut(s)	1046
PagI	TCATGA	2 cut(s)	1231, 2487
PciI	ACATGT	1 cut(s)	2118
PctI	GAATGC	4 cut(s)	236, 368, 747, 2521
PdmI	GAANNNNTTC	2 cut(s)	1183, 2394
PfeI	GAWTC	2 cut(s)	170, 1084
PflFI	GACNNNGTC	2 cut(s)	1943, 2015
PflMI	CCANNNNNTGG	1 cut(s)	1143
PfoI	TCCNGGA	1 cut(s)	499
PkrI	GCNGC	9 cut(s)	28, 123, 561, 647, 715, 718, 1494, 1682, 2070
PleI	GAGTC	3 cut(s)	1899, 2499, 2702
PpsI	GAGTC	3 cut(s)	1899, 2499, 2702
PpuMI	RGGWCCY	1 cut(s)	1289
PscI	ACATGT	1 cut(s)	2118
Psp1406I	AACGTT	1 cut(s)	1392
Psp5II	RGGWCCY	1 cut(s)	1289
Psp6I	CCWGG	4 cut(s)	274, 342, 366, 499
PspGI	CCWGG	4 cut(s)	274, 342, 366, 499
PspN4I	GGNNCC	9 cut(s)	85, 134, 964, 1135, 1290, 1474, 1958, 2145, 2254
PspPI	GGNCC	8 cut(s)	317, 491, 995, 1289, 1376, 1523, 1945, 2303
PspPPI	RGGWCCY	1 cut(s)	1289
PstNI	CAGNNNCTG	1 cut(s)	1010
PsuI	RGATCY	5 cut(s)	962, 1620, 1956, 2143, 2229
PsyI	GACNNNGTC	2 cut(s)	1943, 2015
PvuII	CAGCTG	1 cut(s)	167
RsaI	GTAC	4 cut(s)	85, 846, 909, 2219
RsaNI	GTAC	4 cut(s)	84, 845, 908, 2218
RseI	CAYNNNNRTG	5 cut(s)	567, 1904, 2049, 2586, 2598
SaqAI	TTAA	7 cut(s)	63, 956, 1241, 1544, 1695, 1788, 2562
SatI	GCNGC	9 cut(s)	27, 122, 560, 646, 714, 717, 1493, 1681, 2069
Sau3AI	GATC	7 cut(s)	531, 962, 1620, 1956, 2143, 2201, 2229
Sau96I	GGNCC	8 cut(s)	317, 491, 995, 1289, 1376, 1523, 1945, 2303
SchI	GAGTC	3 cut(s)	1900, 2500, 2702
ScrFI	CCNGG	4 cut(s)	276, 344, 368, 501
SduI	GDGCHC	3 cut(s)	934, 2257, 2595
SfaNI	GCATC	3 cut(s)	1852, 2055, 2409
SfcI	CTRYAG	1 cut(s)	525
SinI	GGWCC	6 cut(s)	317, 995, 1289, 1376, 1945, 2303
SmiMI	CAYNNNNRTG	5 cut(s)	567, 1904, 2049, 2586, 2598
SmlI	CTYRAG	1 cut(s)	2561
SmoI	CTYRAG	1 cut(s)	2561
SphI	GCATGC	1 cut(s)	1046
SsiI	CCGC	5 cut(s)	27, 559, 1190, 2023, 2319
SspMI	CTAG	2 cut(s)	785, 2510
StyD4I	CCNGG	4 cut(s)	274, 342, 366, 499
StyI	CCWWGG	4 cut(s)	1222, 1519, 2341, 2632
TaaI	ACNGT	9 cut(s)	453, 888, 936, 1028, 1118, 1712, 1945, 2613, 2645
TaiI	ACGT	2 cut(s)	1395, 2621
TaqI	TCGA	4 cut(s)	668, 2002, 2181, 2381
TatI	WGTACW	2 cut(s)	907, 2217
TauI	GCSGC	2 cut(s)	29, 562
TfiI	GAWTC	2 cut(s)	170, 1084
Tru1I	TTAA	7 cut(s)	63, 956, 1241, 1544, 1695, 1788, 2562
Tru9I	TTAA	7 cut(s)	63, 956, 1241, 1544, 1695, 1788, 2562
TscAI	CASTG	7 cut(s)	265, 456, 580, 805, 1421, 1675, 2650
TseFI	GTSAC	5 cut(s)	829, 867, 1307, 1892, 2017
TseI	GCWGC	7 cut(s)	121, 645, 713, 716, 1492, 1680, 2068
Tsp45I	GTSAC	5 cut(s)	829, 867, 1307, 1892, 2017
TspGWI	ACGGA	6 cut(s)	579, 932, 975, 1440, 1613, 1949
TspRI	CASTG	7 cut(s)	265, 456, 580, 805, 1421, 1675, 2650
Tth111I	GACNNNGTC	2 cut(s)	1943, 2015
Van91I	CCANNNNNTGG	1 cut(s)	1143
Vha464I	CTTAAG	1 cut(s)	2561
VpaK11BI	GGWCC	6 cut(s)	317, 995, 1289, 1376, 1945, 2303
XagI	CCTNNNNNAGG	1 cut(s)	1530
XapI	RAATTY	7 cut(s)	190, 443, 608, 947, 1646, 1846, 2274
XceI	RCATGY	3 cut(s)	1046, 1731, 2122
XcmI	CCANNNNNNNNNTGG	1 cut(s)	110
XmiI	GTMKAC	1 cut(s)	1539
XmnI	GAANNNNTTC	2 cut(s)	1183, 2394
XspI	CTAG	2 cut(s)	785, 2510
Zsp2I	ATGCAT	1 cut(s)	1733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.