Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002348.1

Orthogroup ID

OG0006231

Physical Location & Seq

Genomic Coordinates Forward (+)

59926 .. 63795

Gene Structure 3870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002348.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2826 bp

atgtggactctcttagccttgtgctgcaatcgtcttaagcataagcaaaagcagaagcagaaccatcctcagagatccgaagaagccatggagaaccaaacgattgaaaatgccgccgacgataaccagattgtgaaacaggatatggttaattcaagtagtagtcatggtaccaatatcatagtgaaccatgatttctgtggagggctgcactcttggcaccccaattgctgtgagggatatgtagtttcagctgattctggccacccacaagcaaattcggatggcaattatgcagttgttactaatcggaaagaatgctggcaaggattggagcaggatatcactgggagggtgtcccctggtttgacttacttggtttcggcttctgttggggtttcgggacctctcgtgggatgtgttgatgtcctggcaacattgaaaatggaatgccagggttcagaaactaagtattcgttagttgggagaagttctgtatcaaatgggaaatgggaaaagttggaaggcaaattttcactgtcaacaatgcctgataaggttgtgttttacttggaagggtcttctcctggaattgacttgcttatacaatctgtagtgatctcttgttccaatccaaagggacggctgcacggaaatgccagtgatggagatgaagatatagtcctaaacccaaaatttgaggatggcttgactaattggactggaagaggctgcaaggtagtcctacacgactcgatgggagatgggaaaatcgtccctcaatctggaaaagtttttgctgctgcaacagaacgcacacagagctggaatggcattcagcaggatattactggaagagtgcaacgaaagctagcttacgaggccactggtgttgtccggatatttggtaacaatgtcacgagttctgatgtacgggctaccttatgggtgcagtcaccagatggtcgtgaacagtatattggcatttctaatgtacaggcaacggacaaggattgggcacagttgaaggggaaattccttttaaacggatccccatccaaagtagtcgtttatttagaaggtccaccagcaggaactgatattcttgtcaacagtttcgttgtcaagcatgcacagaaagtccctccttcttctccaccagatattgagaatcctgcttttggagtaaatgtaattgagaacagtaatctaagtaatggcaccaatgggtggtttcctcttggtaattgcactttaagtgtgggaactggttcaccgcatatacttcctccaatggcgagagatagccttggcgctcatgaacctttaagtggtcgcttcatccttgtaaccaagcgcacacagacttggatgggtcctgctcagatgattggtgacaaattgaaactctttttgacatatcaagtatctgcttgggttcggattggcgctggagcaactggtccacaaaatgtgaacgttgcactcggtgtggacaatcagtgggtgaacggagggcaagctgaggtgggggacaacagatggcatgaaattggtggttcctttagaattgagaagcagccatccaaagttatggtgtatatccaaggccctgcttcaggtgtagacttaatggttgctggacttcagatatttcctgttgacagacaagcaagatttagatacttgaagaggcagactgagaagatccgtaagcgcgatgttgtcctgaaattttcaggattagactggagcagcgcatatggcagcttcgtgaaaattaaacaatcacaaaacagttttccatttgggacatgcataagcagaacaaacattgacaatgaagattttgttgatttctttgtgaaaaactttaactggtctgtatttggaaatgaactgaagtggtattggactgaacctcagaagggaaaattcaattacaaggatgccgatgagatggtggacttgtgcaagagtcacaacatagatatgcgtggccattgtatctattgggaagtggtggacacggtccagcaatggatccgttcattgagccaaaatgacttggcaactgctgtccaaagtcgagtaacagacctcctcacccgctacaaagggaagttcaggcactatgatgtcaataatgagatgctgcatggttcattctatcaagacaaattgggtaaagatatccgagccaacatgttcaagatggcaaaccaattggatccatctgcactcctatttgtgaatgattatcatgtcgaggatggatgtgataccagatcagcaccagaaaagtacattgaacagatccttgatttgcaactacaaggtgcccctgttggtgggattggaattcaaggacatatagatagtccagtaggtccaattgtttgttccactcttgataaattgggtatccttggccttccaatctggttcacagaacttgatgtgtcatcgagcaatgaatgtgttcgtgcggatgacttggaagtgatgcttagggaagcatttgccaatccttcagtagaaggcatagtcctgtggggtttctgggagctgttcatgagtcgtgaaaactcccatctagtgaatgccgaaggggacatcaacgaagctggaaagcgttacttggaactcaagcaagagtggctatctcatgcccatgggcacattgatgaacagggacagttcacgtttagaggcttccatggaacatacagtgtagagatcgctaccccctccaagaaagttctgaagacatttgttgttgacaagggtgatgactctccatttgaggtttccattgctctgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM_4_9 Glyco_hydro_10

Protein Analysis

941

Amino Acids

104.22

Weight (kDa)

5.92

Isoelectric Point (pI)

38.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006231)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58370 AT1G58370 AT4G08160 AT4G08160
fragaria_vesca	FvH4_2g32390 FvH4_2g32390 FvH4_2g32390 FvH4_2g32390
malus_domestica	MD08G1075100.v1.1 MD15G1062600.v1.1
prunus_persica	Prupe.1G416600_v2.0.a1 Prupe.1G416600_v2.0.a1 Prupe.1G416600_v2.0.a1
pyrus_communis	pycom08g06190 pycom15g05930
rosa_chinensis	RchiOBHm_Chr6g0310311
rosa_laevigata	RLG00000010492
rosa_multiflora	Rmu_sc0002348.1_g000014
rosa_roxburghii	Rroxscaffold_7G00158670
rosa_rugosa	Rorug06G0378800 Rorug06G0378900 Rorug06G0379000
rosa_samantha	Rh6AG493200 Rh6BG502800 Rh6CG507800 Rh6DG493900
rosa_wichuraiana	Rw6G042910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	170
AccB1I	GGYRCC	4 cut(s)	170, 219, 1220, 2339
AccB7I	CCANNNNNTGG	1 cut(s)	1230
AccI	GTMKAC	1 cut(s)	1626
AccII	CGCG	1 cut(s)	1719
AccIII	TCCGGA	1 cut(s)	897
AciI	CCGC	4 cut(s)	114, 1277, 2110, 2489
AclI	AACGTT	1 cut(s)	1479
AclWI	GGATC	9 cut(s)	69, 1044, 1057, 1702, 2038, 2051, 2225, 2238, 2311
AcoI	YGGCCR	2 cut(s)	262, 1999
AcsI	RAATTY	7 cut(s)	277, 530, 695, 1034, 1733, 1934, 2361
AcuI	CTGAAG	5 cut(s)	1602, 1631, 1922, 2517, 2786
AdeI	CACNNNGTG	1 cut(s)	1490
AfaI	GTAC	4 cut(s)	172, 933, 996, 2306
AfiI	CCNNNNNNNGG	9 cut(s)	413, 785, 1091, 1181, 1230, 1331, 1619, 1928, 2351
AflII	CTTAAG	1 cut(s)	35
AflIII	ACRYGT	1 cut(s)	2205
AjnI	CCWGG	4 cut(s)	361, 429, 453, 586
AjuI	GAANNNNNNNTTGG	4 cut(s)	963, 995, 2386, 2418
AluBI	AGCT	8 cut(s)	254, 825, 871, 875, 1523, 1770, 2569, 2627
AluI	AGCT	8 cut(s)	254, 825, 871, 875, 1523, 1770, 2569, 2627
AlwI	GGATC	9 cut(s)	69, 1044, 1057, 1702, 2038, 2051, 2225, 2238, 2311
AlwNI	CAGNNNCTG	1 cut(s)	1097
Aor13HI	TCCGGA	1 cut(s)	897
AoxI	GGCC	5 cut(s)	262, 882, 1609, 1999, 2431
ApoI	RAATTY	7 cut(s)	277, 530, 695, 1034, 1733, 1934, 2361
ArsI	GACNNNNNNTTYG	2 cut(s)	2786, 2818
Asp700I	GAANNNNTTC	2 cut(s)	1270, 2481
Asp718I	GGTACC	1 cut(s)	170
AspLEI	GCGC	5 cut(s)	1316, 1359, 1451, 1719, 1760
AspS9I	GGNCC	7 cut(s)	404, 1082, 1376, 1463, 1610, 2032, 2390
AsuHPI	GGTGA	6 cut(s)	948, 1266, 1406, 1519, 2098, 2801
AsuNHI	GCTAGC	1 cut(s)	871
AvaII	GGWCC	6 cut(s)	404, 1082, 1376, 1463, 2032, 2390
BaeGI	GKGCMC	3 cut(s)	1021, 2344, 2682
BalI	TGGCCA	2 cut(s)	264, 2001
BamHI	GGATCC	3 cut(s)	1049, 2043, 2230
BanI	GGYRCC	4 cut(s)	170, 219, 1220, 2339
BauI	CACGAG	2 cut(s)	410, 919
BbsI	GAAGAC	2 cut(s)	573, 2774
BbvCI	CCTCAGC	1 cut(s)	1524
BceAI	ACGGC	1 cut(s)	659
BciT130I	CCWGG	4 cut(s)	363, 431, 455, 588
BciVI	GTATCC	1 cut(s)	2435
BfaI	CTAG	2 cut(s)	872, 2597
BfmI	CTRYAG	1 cut(s)	612
BfoI	RGCGCY	2 cut(s)	1317, 1452
BfrI	CTTAAG	1 cut(s)	35
BfuI	GTATCC	1 cut(s)	2435
Bme1390I	CCNGG	4 cut(s)	363, 431, 455, 588
Bme18I	GGWCC	6 cut(s)	404, 1082, 1376, 1463, 2032, 2390
BmgT120I	GGNCC	7 cut(s)	404, 1082, 1376, 1463, 1610, 2032, 2390
BmrFI	CCNGG	4 cut(s)	363, 431, 455, 588
BmrI	ACTGGG	1 cut(s)	357
BmsI	GCATC	3 cut(s)	1939, 2142, 2496
BmtI	GCTAGC	1 cut(s)	875
BmuI	ACTGGG	1 cut(s)	357
BpiI	GAAGAC	2 cut(s)	573, 2774
BpmI	CTGGAG	2 cut(s)	1473, 1771
Bpu10I	CCTNAGC	2 cut(s)	1524, 2510
BpuEI	CTTGAG	1 cut(s)	2633
BsaBI	GATNNNNATC	1 cut(s)	1054
BsaJI	CCNNGG	8 cut(s)	87, 361, 454, 1309, 1606, 2428, 2674, 2719
BsaWI	WCCGGW	1 cut(s)	897
BsaXI	ACNNNNNCTCC	2 cut(s)	1176, 1206
Bsc4I	CCNNNNNNNGG	9 cut(s)	413, 785, 1091, 1181, 1230, 1331, 1619, 1928, 2351
Bse3DI	GCAATG	3 cut(s)	2045, 2479, 2814
Bse8I	GATNNNNATC	1 cut(s)	1054
BseAI	TCCGGA	1 cut(s)	897
BseBI	CCWGG	4 cut(s)	363, 431, 455, 588
BseDI	CCNNGG	8 cut(s)	87, 361, 454, 1309, 1606, 2428, 2674, 2719
BseJI	GATNNNNATC	1 cut(s)	1054
BseLI	CCNNNNNNNGG	9 cut(s)	413, 785, 1091, 1181, 1230, 1331, 1619, 1928, 2351
BseMI	GCAATG	3 cut(s)	2045, 2479, 2814
BseMII	CTCAG	5 cut(s)	83, 1397, 1515, 1692, 1937
BseRI	GAGGAG	1 cut(s)	2093
BseSI	GKGCMC	3 cut(s)	1021, 2344, 2682
BsgI	GTGCAG	4 cut(s)	194, 632, 971, 2223
Bsh1236I	CGCG	1 cut(s)	1719
BshFI	GGCC	5 cut(s)	264, 884, 1611, 2001, 2433
BshNI	GGYRCC	4 cut(s)	170, 219, 1220, 2339
BsiSI	CCGG	1 cut(s)	898
BslFI	GGGAC	9 cut(s)	343, 417, 654, 761, 1127, 1547, 1825, 2627, 2709
BslI	CCNNNNNNNGG	9 cut(s)	413, 785, 1091, 1181, 1230, 1331, 1619, 1928, 2351
BsmFI	GGGAC	9 cut(s)	343, 417, 654, 761, 1127, 1547, 1825, 2627, 2709
BsmI	GAATGC	4 cut(s)	323, 455, 834, 2608
BsnI	GGCC	5 cut(s)	264, 884, 1611, 2001, 2433
Bsp1286I	GDGCHC	3 cut(s)	1021, 2344, 2682
Bsp13I	TCCGGA	1 cut(s)	897
Bsp1407I	TGTACA	1 cut(s)	994
Bsp143I	GATC	9 cut(s)	74, 618, 1049, 1707, 2043, 2230, 2288, 2316, 2739
Bsp19I	CCATGG	3 cut(s)	87, 2674, 2719
BspACI	CCGC	4 cut(s)	114, 1277, 2110, 2489
BspANI	GGCC	5 cut(s)	264, 884, 1611, 2001, 2433
BspCNI	CTCAG	5 cut(s)	82, 1396, 1516, 1693, 1936
BspEI	TCCGGA	1 cut(s)	897
BspFNI	CGCG	1 cut(s)	1719
BspHI	TCATGA	2 cut(s)	1318, 2574
BspOI	GCTAGC	1 cut(s)	875
BspPI	GGATC	9 cut(s)	69, 1044, 1057, 1702, 2038, 2051, 2225, 2238, 2311
BspT107I	GGYRCC	4 cut(s)	170, 219, 1220, 2339
BspTI	CTTAAG	1 cut(s)	35
BsrDI	GCAATG	3 cut(s)	2045, 2479, 2814
BsrGI	TGTACA	1 cut(s)	994
BssECI	CCNNGG	8 cut(s)	87, 361, 454, 1309, 1606, 2428, 2674, 2719
BssMI	GATC	9 cut(s)	74, 618, 1049, 1707, 2043, 2230, 2288, 2316, 2739
BssSI	CACGAG	2 cut(s)	410, 919
BssT1I	CCWWGG	6 cut(s)	87, 1309, 1606, 2428, 2674, 2719
Bst2BI	CACGAG	2 cut(s)	410, 919
Bst2UI	CCWGG	4 cut(s)	363, 431, 455, 588
Bst4CI	ACNGT	9 cut(s)	540, 975, 1023, 1115, 1205, 1799, 2032, 2700, 2732
Bst6I	CTCTTC	3 cut(s)	721, 850, 1685
BstAFI	CTTAAG	1 cut(s)	35
BstAUI	TGTACA	1 cut(s)	994
BstC8I	GCNNGC	4 cut(s)	323, 873, 1131, 1521
BstDEI	CTNAG	9 cut(s)	13, 69, 468, 1211, 1383, 1524, 1701, 1923, 2510
BstDSI	CCRYGG	3 cut(s)	87, 2674, 2719
BstENI	CCTNNNNNAGG	1 cut(s)	1617
BstFNI	CGCG	1 cut(s)	1719
BstH2I	RGCGCY	2 cut(s)	1317, 1452
BstHHI	GCGC	5 cut(s)	1316, 1359, 1451, 1719, 1760
BstKTI	GATC	9 cut(s)	77, 621, 1052, 1710, 2046, 2233, 2291, 2319, 2742
BstMBI	GATC	9 cut(s)	74, 618, 1049, 1707, 2043, 2230, 2288, 2316, 2739
BstMWI	GCNNNNNNNGC	7 cut(s)	217, 822, 831, 868, 881, 1764, 2659
BstNI	CCWGG	4 cut(s)	363, 431, 455, 588
BstNSI	RCATGY	3 cut(s)	1133, 1818, 2209
BstSCI	CCNGG	4 cut(s)	361, 429, 453, 586
BstSFI	CTRYAG	1 cut(s)	612
BstSLI	GKGCMC	3 cut(s)	1021, 2344, 2682
BstUI	CGCG	1 cut(s)	1719
BstV2I	GAAGAC	2 cut(s)	573, 2774
BstX2I	RGATCY	6 cut(s)	74, 1049, 1707, 2043, 2230, 2316
BstXI	CCANNNNNNTGG	1 cut(s)	1594
BstYI	RGATCY	6 cut(s)	74, 1049, 1707, 2043, 2230, 2316
BsuI	GTATCC	1 cut(s)	2435
BsuRI	GGCC	5 cut(s)	264, 884, 1611, 2001, 2433
BtgI	CCRYGG	3 cut(s)	87, 2674, 2719
BtgZI	GCGATG	1 cut(s)	1734
BtsIMutI	CAGTG	6 cut(s)	345, 536, 667, 885, 1508, 2737
Cac8I	GCNNGC	4 cut(s)	323, 873, 1131, 1521
CaiI	CAGNNNCTG	1 cut(s)	1097
CciI	TCATGA	2 cut(s)	1318, 2574
CfoI	GCGC	5 cut(s)	1316, 1359, 1451, 1719, 1760
Cfr13I	GGNCC	7 cut(s)	404, 1082, 1376, 1463, 1610, 2032, 2390
Csp6I	GTAC	4 cut(s)	171, 932, 995, 2305
CspCI	CAANNNNNGTGG	2 cut(s)	874, 909
CviQI	GTAC	4 cut(s)	171, 932, 995, 2305
DdeI	CTNAG	9 cut(s)	13, 69, 468, 1211, 1383, 1524, 1701, 1923, 2510
DpnI	GATC	9 cut(s)	76, 620, 1051, 1709, 2045, 2232, 2290, 2318, 2741
DpnII	GATC	9 cut(s)	74, 618, 1049, 1707, 2043, 2230, 2288, 2316, 2739
DraI	TTTAAA	1 cut(s)	1044
DraIII	CACNNNGTG	1 cut(s)	1490
EaeI	YGGCCR	2 cut(s)	262, 1999
Eam1104I	CTCTTC	3 cut(s)	721, 850, 1685
EarI	CTCTTC	3 cut(s)	721, 850, 1685
Eco130I	CCWWGG	6 cut(s)	87, 1309, 1606, 2428, 2674, 2719
Eco32I	GATATC	2 cut(s)	343, 2194
Eco47I	GGWCC	6 cut(s)	404, 1082, 1376, 1463, 2032, 2390
Eco57I	CTGAAG	5 cut(s)	1602, 1631, 1922, 2517, 2786
EcoNI	CCTNNNNNAGG	1 cut(s)	1617
EcoO109I	RGGNCCY	3 cut(s)	404, 1376, 1610
EcoRI	GAATTC	1 cut(s)	2361
EcoRII	CCWGG	4 cut(s)	361, 429, 453, 586
EcoRV	GATATC	2 cut(s)	343, 2194
EcoT14I	CCWWGG	6 cut(s)	87, 1309, 1606, 2428, 2674, 2719
EcoT22I	ATGCAT	1 cut(s)	1820
ErhI	CCWWGG	6 cut(s)	87, 1309, 1606, 2428, 2674, 2719
FalI	AAGNNNNNCTT	4 cut(s)	2493, 2525, 2624, 2656
FaqI	GGGAC	9 cut(s)	343, 417, 654, 761, 1127, 1547, 1825, 2627, 2709
FauI	CCCGC	1 cut(s)	2117
FauNDI	CATATG	1 cut(s)	1762
FblI	GTMKAC	1 cut(s)	1626
FspBI	CTAG	2 cut(s)	872, 2597
GlaI	GCGC	5 cut(s)	1315, 1358, 1450, 1718, 1759
GsuI	CTGGAG	2 cut(s)	1473, 1771
HaeII	RGCGCY	2 cut(s)	1317, 1452
HaeIII	GGCC	5 cut(s)	264, 884, 1611, 2001, 2433
HapII	CCGG	1 cut(s)	898
HhaI	GCGC	5 cut(s)	1316, 1359, 1451, 1719, 1760
Hin6I	GCGC	5 cut(s)	1314, 1357, 1449, 1717, 1758
HinP1I	GCGC	5 cut(s)	1314, 1357, 1449, 1717, 1758
HincII	GTYRAC	4 cut(s)	543, 1111, 1663, 2782
HindII	GTYRAC	4 cut(s)	543, 1111, 1663, 2782
HinfI	GANTC	7 cut(s)	7, 257, 752, 1171, 1978, 2578, 2795
HpaII	CCGG	1 cut(s)	898
HphI	GGTGA	6 cut(s)	948, 1266, 1406, 1519, 2098, 2801
Hpy99I	CGWCG	1 cut(s)	122
HpyCH4III	ACNGT	9 cut(s)	540, 975, 1023, 1115, 1205, 1799, 2032, 2700, 2732
HpyCH4IV	ACGT	2 cut(s)	1479, 2705
HpyF10VI	GCNNNNNNNGC	7 cut(s)	217, 822, 831, 868, 881, 1764, 2659
HpyF3I	CTNAG	9 cut(s)	13, 69, 468, 1211, 1383, 1524, 1701, 1923, 2510
HpySE526I	ACGT	2 cut(s)	1479, 2705
HspAI	GCGC	5 cut(s)	1314, 1357, 1449, 1717, 1758
Kpn2I	TCCGGA	1 cut(s)	897
KpnI	GGTACC	1 cut(s)	174
Kzo9I	GATC	9 cut(s)	74, 618, 1049, 1707, 2043, 2230, 2288, 2316, 2739
LmnI	GCTCC	4 cut(s)	334, 1454, 1752, 2566
LweI	GCATC	3 cut(s)	1939, 2142, 2496
MaeI	CTAG	2 cut(s)	872, 2597
MaeII	ACGT	2 cut(s)	1479, 2705
MaeIII	GTNAC	9 cut(s)	301, 908, 916, 954, 1348, 1394, 1979, 2092, 2636
MalI	GATC	9 cut(s)	76, 620, 1051, 1709, 2045, 2232, 2290, 2318, 2741
MboI	GATC	9 cut(s)	74, 618, 1049, 1707, 2043, 2230, 2288, 2316, 2739
MfeI	CAATTG	3 cut(s)	226, 2225, 2394
MflI	RGATCY	6 cut(s)	74, 1049, 1707, 2043, 2230, 2316
MhlI	GDGCHC	3 cut(s)	1021, 2344, 2682
MlsI	TGGCCA	2 cut(s)	264, 2001
MluNI	TGGCCA	2 cut(s)	264, 2001
MlyI	GAGTC	4 cut(s)	746, 1987, 2587, 2789
MmeI	TCCRAC	1 cut(s)	501
Mox20I	TGGCCA	2 cut(s)	264, 2001
Mph1103I	ATGCAT	1 cut(s)	1820
MroI	TCCGGA	1 cut(s)	897
MroXI	GAANNNNTTC	2 cut(s)	1270, 2481
MscI	TGGCCA	2 cut(s)	264, 2001
MseI	TTAA	8 cut(s)	36, 150, 1043, 1256, 1328, 1631, 1782, 1875
MslI	CAYNNNNRTG	5 cut(s)	654, 1991, 2136, 2673, 2685
Msp20I	TGGCCA	2 cut(s)	264, 2001
MspA1I	CMGCKG	1 cut(s)	254
MspCI	CTTAAG	1 cut(s)	35
MspI	CCGG	1 cut(s)	898
MspR9I	CCNGG	4 cut(s)	363, 431, 455, 588
MunI	CAATTG	3 cut(s)	226, 2225, 2394
Mva1269I	GAATGC	4 cut(s)	323, 455, 834, 2608
MvaI	CCWGG	4 cut(s)	363, 431, 455, 588
MvnI	CGCG	1 cut(s)	1719
MwoI	GCNNNNNNNGC	7 cut(s)	217, 822, 831, 868, 881, 1764, 2659
NcoI	CCATGG	3 cut(s)	87, 2674, 2719
NdeI	CATATG	1 cut(s)	1762
NdeII	GATC	9 cut(s)	74, 618, 1049, 1707, 2043, 2230, 2288, 2316, 2739
NheI	GCTAGC	1 cut(s)	871
NmuCI	GTSAC	4 cut(s)	916, 954, 1394, 1979
NsiI	ATGCAT	1 cut(s)	1820
NspI	RCATGY	3 cut(s)	1133, 1818, 2209
PaeI	GCATGC	1 cut(s)	1133
PagI	TCATGA	2 cut(s)	1318, 2574
PciI	ACATGT	1 cut(s)	2205
PctI	GAATGC	4 cut(s)	323, 455, 834, 2608
PdmI	GAANNNNTTC	2 cut(s)	1270, 2481
PfeI	GAWTC	2 cut(s)	257, 1171
PflFI	GACNNNGTC	1 cut(s)	2030
PflMI	CCANNNNNTGG	1 cut(s)	1230
PfoI	TCCNGGA	1 cut(s)	586
PleI	GAGTC	4 cut(s)	746, 1986, 2586, 2789
PpsI	GAGTC	4 cut(s)	746, 1986, 2586, 2789
PpuMI	RGGWCCY	2 cut(s)	404, 1376
PscI	ACATGT	1 cut(s)	2205
Psp1406I	AACGTT	1 cut(s)	1479
Psp5II	RGGWCCY	2 cut(s)	404, 1376
Psp6I	CCWGG	4 cut(s)	361, 429, 453, 586
PspGI	CCWGG	4 cut(s)	361, 429, 453, 586
PspPI	GGNCC	7 cut(s)	404, 1082, 1376, 1463, 1610, 2032, 2390
PspPPI	RGGWCCY	2 cut(s)	404, 1376
PstNI	CAGNNNCTG	1 cut(s)	1097
PsuI	RGATCY	6 cut(s)	74, 1049, 1707, 2043, 2230, 2316
PsyI	GACNNNGTC	1 cut(s)	2030
PvuII	CAGCTG	1 cut(s)	254
RsaI	GTAC	4 cut(s)	172, 933, 996, 2306
RsaNI	GTAC	4 cut(s)	171, 932, 995, 2305
RseI	CAYNNNNRTG	5 cut(s)	654, 1991, 2136, 2673, 2685
SaqAI	TTAA	8 cut(s)	36, 150, 1043, 1256, 1328, 1631, 1782, 1875
Sau3AI	GATC	9 cut(s)	74, 618, 1049, 1707, 2043, 2230, 2288, 2316, 2739
Sau96I	GGNCC	7 cut(s)	404, 1082, 1376, 1463, 1610, 2032, 2390
SchI	GAGTC	4 cut(s)	746, 1987, 2587, 2789
ScrFI	CCNGG	4 cut(s)	363, 431, 455, 588
SduI	GDGCHC	3 cut(s)	1021, 2344, 2682
SfaNI	GCATC	3 cut(s)	1939, 2142, 2496
SfcI	CTRYAG	1 cut(s)	612
SinI	GGWCC	6 cut(s)	404, 1082, 1376, 1463, 2032, 2390
SmiMI	CAYNNNNRTG	5 cut(s)	654, 1991, 2136, 2673, 2685
SmlI	CTYRAG	2 cut(s)	35, 2648
SmoI	CTYRAG	2 cut(s)	35, 2648
SphI	GCATGC	1 cut(s)	1133
SsiI	CCGC	4 cut(s)	114, 1277, 2110, 2489
SspMI	CTAG	2 cut(s)	872, 2597
StyD4I	CCNGG	4 cut(s)	361, 429, 453, 586
StyI	CCWWGG	6 cut(s)	87, 1309, 1606, 2428, 2674, 2719
TaaI	ACNGT	9 cut(s)	540, 975, 1023, 1115, 1205, 1799, 2032, 2700, 2732
TaiI	ACGT	2 cut(s)	1482, 2708
TaqI	TCGA	4 cut(s)	755, 2089, 2268, 2468
TatI	WGTACW	2 cut(s)	994, 2304
TauI	GCSGC	1 cut(s)	116
TfiI	GAWTC	2 cut(s)	257, 1171
Tru1I	TTAA	8 cut(s)	36, 150, 1043, 1256, 1328, 1631, 1782, 1875
Tru9I	TTAA	8 cut(s)	36, 150, 1043, 1256, 1328, 1631, 1782, 1875
TscAI	CASTG	6 cut(s)	352, 543, 667, 892, 1508, 2737
TseFI	GTSAC	4 cut(s)	916, 954, 1394, 1979
Tsp45I	GTSAC	4 cut(s)	916, 954, 1394, 1979
TspGWI	ACGGA	6 cut(s)	666, 1019, 1062, 1527, 1700, 2036
TspRI	CASTG	6 cut(s)	352, 543, 667, 892, 1508, 2737
Tth111I	GACNNNGTC	1 cut(s)	2030
Van91I	CCANNNNNTGG	1 cut(s)	1230
Vha464I	CTTAAG	1 cut(s)	35
VpaK11BI	GGWCC	6 cut(s)	404, 1082, 1376, 1463, 2032, 2390
XagI	CCTNNNNNAGG	1 cut(s)	1617
XapI	RAATTY	7 cut(s)	277, 530, 695, 1034, 1733, 1934, 2361
XceI	RCATGY	3 cut(s)	1133, 1818, 2209
XcmI	CCANNNNNNNNNTGG	1 cut(s)	197
XmiI	GTMKAC	1 cut(s)	1626
XmnI	GAANNNNTTC	2 cut(s)	1270, 2481
XspI	CTAG	2 cut(s)	872, 2597
Zsp2I	ATGCAT	1 cut(s)	1820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.