RLG00000011275

3-ketoacyl-CoA synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0010704
Physical Location & Seq
Reverse (-)
8169160 .. 8170713
1554 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011275

Sequence Viewer

Length: 1554 bp
ATGGACCAAGGCGGCCCAGCCCACGTCGCCTCCGCAGCGGCCGGCGGAGGAGGTCAGGTCGGGGTTCGGATCCACCAAGCCCGAAGGCTGCCGGATTTCCTCCAGAGCGTGAATCTCAAGTACGTGAAATTAGGCTACCATTATCTCATCTCCAATCTCTTGACCTTGTGCTTCATCCCCTTAATCATCGTCACCTTAATCGAGGCCTCCCAAATGGACCTCCACGACCTCCGCCACCTCTGGCTCCACCTCCAGTACAACCTCGTCAGCGTCATCATCTGCTCCGCCGTCCTCGTCTTCGGGTTGACCGTTTACATCATGACCCGGCCCAGGCCCGTTTACCTCGTCGATTTCTCCTGCTACCGCCCTCCCGACCACCTCAAGGCCCCCTACCAGCGCTTCATGGACCACTCCCGCCTCACCAACGACTTCGACGACTCCTCGCTCGAGTTCCAGCGCAAGATTCTCGAGCGCTCCGGCCTCGGAGAAGAGACCTACGCCCCCGAGGCGATGCACCACATCCCTCCCCGGCCGTCCATGGCGGCGGCGAGGGAAGAGGCCGAGCAGGTTATGTATGGCGCCCTGGATAATCTGTTTGCAAGTACCAATGTGAAGCCCAAGGATATTGGGATACTTGTTGTCAACTGCAGCTTGTTTAACCCGACGCCGTCGCTGTCGGCGATGATTGTGAATAAGTATAAGCTGAGGGGGAACATTAGGAGCTTCAATTTGGGAGGGATGGGTTGCAGTGCTGGGGTTATAGCTGTTGATCTTGCTAAGGACTTGTTGCAGGTTCATAGGAATACTTATGCTGTTGTGGTCAGTACTGAGAACATTACTCAGAATTGGTATTTTGGGAATAAGAAGTCTATGTTGATACCCAATTGCTTGTTTCGAGTCGGGGGCTCGGCGGTTTTGCTGTCCAATAAGTCTGTGGATAGGAGGAGGGCCAAGTACAGGCTTGTTCATGTTGTGAGGACTCATCGCGGCGCGGATGACAAGGCGTTTCGGTGTGTTTATCAGGAGCAGGATGATAAGGGGAAGACTGGTGTTTCTTTGTCGAAAGATTTGATGGCCATTGCCGGTGGGGCGCTCAAGACTAACATAACTACTTTGGGACCTATTGTGCTTCCGATAAGCGAGCAGCTGCTTTTCTTTTCTTCTCTTGTGGTTAAGAAGCTGTTGAATGGGGATGTCAAGCCGTATATCCCGGATTTCAAGCTCGCATTTGATCATTTCTGCATACATGCTGGGGGAAGGGCTGTGATTGATGAGCTGGAGAAGAACCTGCAGTTGTTGCCAATACATGTGGAGGCTTCTCGGATGACTCTACACCGGTTTGGGAATACTTCGTCGAGCTCCATTTGGTATGAGTTGGCCTATACAGAGGCCAAAGGGAGGATGCGCAAGGGCAACCGTGTCTGGCAGATTGCCTTTGGTAGTGGTTTCAAATGTAACAGTGCAGTCTGGGAGGCTCTGCGGAATGTCAAGCCATCTCATAATGGTCCTTGGGAGGACAGCATTGACAAGTACCCCGTGAAAGTAGTTTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00062 ko01110 map00062 map01110
Pfam Domains
Protein Families
ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

518

Amino Acids

57.74

Weight (kDa)

9.3

Isoelectric Point (pI)

36.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAE1_CUT1_RppA PF08392 105 - 394 5.4e-146 FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C PF08541 411 - 491 3.4e-11 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C PF02797 413 - 484 1.1e-08 Chalcone and stilbene synthases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1406
Acc36I ACCTGC 3 cut(s) 556, 781, 1296
AccB1I GGYRCC 1 cut(s) 578
AccII CGCG 2 cut(s) 987, 992
AclWI GGATC 2 cut(s) 64, 77
AcoI YGGCCR 3 cut(s) 39, 530, 1074
AcyI GRCGYC 2 cut(s) 579, 665
AfaI GTAC 6 cut(s) 122, 257, 604, 826, 956, 1532
AfeI AGCGCT 2 cut(s) 398, 473
AfiI CCNNNNNNNGG 4 cut(s) 330, 382, 957, 1398
AflIII ACRYGT 1 cut(s) 1306
AgeI ACCGGT 1 cut(s) 1335
AgsI TTSAA 4 cut(s) 727, 1186, 1219, 1450
AjiI CACGTC 1 cut(s) 25
AjnI CCWGG 2 cut(s) 329, 582
AluBI AGCT 9 cut(s) 651, 703, 723, 764, 1147, 1180, 1222, 1276, 1359
AluI AGCT 9 cut(s) 651, 703, 723, 764, 1147, 1180, 1222, 1276, 1359
Alw21I GWGCWC 1 cut(s) 1361
Alw26I GTCTC 1 cut(s) 485
AlwI GGATC 2 cut(s) 64, 77
Ama87I CYCGRG 3 cut(s) 446, 467, 503
Aor51HI AGCGCT 2 cut(s) 398, 473
ApeKI GCWGC 5 cut(s) 35, 88, 648, 1144, 1147
AsiGI ACCGGT 1 cut(s) 1335
AspLEI GCGC 7 cut(s) 399, 459, 474, 581, 992, 1093, 1407
AsuC2I CCSGG 3 cut(s) 325, 529, 1211
AsuHPI GGTGA 2 cut(s) 184, 412
AvaI CYCGRG 3 cut(s) 446, 467, 503
AvaII GGWCC 5 cut(s) 4, 217, 406, 1118, 1505
BalI TGGCCA 1 cut(s) 1076
BamHI GGATCC 1 cut(s) 69
BanI GGYRCC 1 cut(s) 578
BanII GRGCYC 2 cut(s) 908, 1361
BbsI GAAGAC 2 cut(s) 289, 1049
Bbv12I GWGCWC 1 cut(s) 1361
BbvCI CCTCAGC 1 cut(s) 704
BbvI GCAGC 5 cut(s) 47, 75, 660, 1134, 1156
BccI CCATC 3 cut(s) 733, 1066, 1501
BceAI ACGGC 4 cut(s) 272, 517, 652, 1186
BcgI CGANNNNNNTGC 2 cut(s) 448, 482
BciT130I CCWGG 2 cut(s) 331, 584
BciVI GTATCC 1 cut(s) 624
BclI TGATCA 1 cut(s) 1231
BcnI CCSGG 3 cut(s) 325, 529, 1211
BcoDI GTCTC 1 cut(s) 485
BfmI CTRYAG 2 cut(s) 646, 1289
BfoI RGCGCY 4 cut(s) 400, 475, 582, 1094
BfuAI ACCTGC 3 cut(s) 556, 781, 1296
BfuI GTATCC 1 cut(s) 624
BglI GCCNNNNNGGC 2 cut(s) 506, 1088
BmcAI AGTACT 1 cut(s) 826
Bme1390I CCNGG 5 cut(s) 325, 331, 529, 584, 1211
Bme18I GGWCC 5 cut(s) 4, 217, 406, 1118, 1505
BmeT110I CYCGRG 3 cut(s) 446, 467, 503
BmgBI CACGTC 1 cut(s) 25
BmiI GGNNCC 5 cut(s) 71, 245, 387, 580, 1119
BmrFI CCNGG 5 cut(s) 325, 331, 529, 584, 1211
BmsI GCATC 2 cut(s) 501, 1392
BpiI GAAGAC 2 cut(s) 289, 1049
BpmI CTGGAG 3 cut(s) 86, 236, 1298
Bpu10I CCTNAGC 2 cut(s) 704, 777
BpuEI CTTGAG 3 cut(s) 101, 365, 1079
BpuMI CCSGG 3 cut(s) 325, 529, 1211
BsaAI YACGTR 1 cut(s) 124
BsaHI GRCGYC 2 cut(s) 579, 665
BsaI GGTCTC 1 cut(s) 485
BsaJI CCNNGG 9 cut(s) 7, 329, 481, 504, 527, 537, 582, 618, 1508
BsaWI WCCGGW 1 cut(s) 1335
BsaXI ACNNNNNCTCC 4 cut(s) 14, 42, 44, 72
Bsc4I CCNNNNNNNGG 4 cut(s) 330, 382, 957, 1398
Bse118I RCCGGY 3 cut(s) 41, 1082, 1335
Bse1I ACTGG 2 cut(s) 253, 1051
Bse3DI GCAATG 1 cut(s) 1077
BseBI CCWGG 2 cut(s) 331, 584
BseDI CCNNGG 9 cut(s) 7, 329, 481, 504, 527, 537, 582, 618, 1508
BseGI GGATG 8 cut(s) 174, 519, 744, 1000, 1036, 1198, 1329, 1407
BseLI CCNNNNNNNGG 4 cut(s) 330, 382, 957, 1398
BseMI GCAATG 1 cut(s) 1077
BseMII CTCAG 3 cut(s) 695, 819, 854
BseNI ACTGG 2 cut(s) 253, 1051
BseRI GAGGAG 3 cut(s) 63, 430, 958
BseX3I CGGCCG 2 cut(s) 39, 530
BseXI GCAGC 5 cut(s) 47, 75, 660, 1134, 1156
BseYI CCCAGC 3 cut(s) 16, 752, 1250
BsgI GTGCAG 1 cut(s) 1482
Bsh1236I CGCG 2 cut(s) 987, 992
Bsh1285I CGRYCG 2 cut(s) 42, 533
BshNI GGYRCC 1 cut(s) 578
BshTI ACCGGT 1 cut(s) 1335
BsiEI CGRYCG 2 cut(s) 42, 533
BsiHKAI GWGCWC 1 cut(s) 1361
BsiHKCI CYCGRG 3 cut(s) 446, 467, 503
BsiSI CCGG 8 cut(s) 42, 92, 325, 477, 529, 1083, 1211, 1336
BslFI GGGAC 1 cut(s) 1131
BslI CCNNNNNNNGG 4 cut(s) 330, 382, 957, 1398
BsmAI GTCTC 1 cut(s) 485
BsmFI GGGAC 1 cut(s) 1131
Bso31I GGTCTC 1 cut(s) 485
BsoBI CYCGRG 3 cut(s) 446, 467, 503
Bsp1286I GDGCHC 2 cut(s) 908, 1361
Bsp143I GATC 3 cut(s) 69, 769, 1231
Bsp19I CCATGG 1 cut(s) 537
BspCNI CTCAG 3 cut(s) 696, 820, 853
BspFNI CGCG 2 cut(s) 987, 992
BspHI TCATGA 1 cut(s) 318
BspLI GGNNCC 5 cut(s) 71, 245, 387, 580, 1119
BspMAI CTGCAG 2 cut(s) 650, 1293
BspMI ACCTGC 3 cut(s) 556, 781, 1296
BspPI GGATC 2 cut(s) 64, 77
BspT107I GGYRCC 1 cut(s) 578
BspTNI GGTCTC 1 cut(s) 485
BsrDI GCAATG 1 cut(s) 1077
BsrFI RCCGGY 3 cut(s) 41, 1082, 1335
BsrI ACTGG 2 cut(s) 253, 1051
BssAI RCCGGY 3 cut(s) 41, 1082, 1335
BssECI CCNNGG 9 cut(s) 7, 329, 481, 504, 527, 537, 582, 618, 1508
BssMI GATC 3 cut(s) 69, 769, 1231
BssNI GRCGYC 2 cut(s) 579, 665
BssT1I CCWWGG 4 cut(s) 7, 537, 618, 1508
Bst2UI CCWGG 2 cut(s) 331, 584
Bst4CI ACNGT 3 cut(s) 310, 1418, 1460
Bst6I CTCTTC 2 cut(s) 483, 549
BstACI GRCGYC 2 cut(s) 579, 665
BstAPI GCANNNNNTGC 1 cut(s) 1297
BstBAI YACGTR 1 cut(s) 124
BstC8I GCNNGC 3 cut(s) 43, 1142, 1224
BstDEI CTNAG 4 cut(s) 704, 777, 828, 840
BstDSI CCRYGG 1 cut(s) 537
BstF5I GGATG 8 cut(s) 174, 519, 744, 1000, 1036, 1198, 1329, 1407
BstFNI CGCG 2 cut(s) 987, 992
BstH2I RGCGCY 4 cut(s) 400, 475, 582, 1094
BstHHI GCGC 7 cut(s) 399, 459, 474, 581, 992, 1093, 1407
BstKTI GATC 3 cut(s) 72, 772, 1234
BstMAI GTCTC 1 cut(s) 485
BstMBI GATC 3 cut(s) 69, 769, 1231
BstMCI CGRYCG 2 cut(s) 42, 533
BstMWI GCNNNNNNNGC 5 cut(s) 26, 35, 506, 1088, 1297
BstNI CCWGG 2 cut(s) 331, 584
BstNSI RCATGY 2 cut(s) 1250, 1310
BstSCI CCNGG 5 cut(s) 323, 329, 527, 582, 1209
BstSFI CTRYAG 2 cut(s) 646, 1289
BstUI CGCG 2 cut(s) 987, 992
BstV1I GCAGC 5 cut(s) 47, 75, 660, 1134, 1156
BstV2I GAAGAC 2 cut(s) 289, 1049
BstX2I RGATCY 1 cut(s) 69
BstYI RGATCY 1 cut(s) 69
BstZI CGGCCG 2 cut(s) 39, 530
BsuI GTATCC 1 cut(s) 624
BtgI CCRYGG 1 cut(s) 537
BtgZI GCGATG 3 cut(s) 524, 695, 968
BtrI CACGTC 1 cut(s) 25
BtsCI GGATG 8 cut(s) 174, 519, 744, 1000, 1036, 1198, 1329, 1407
BtsI GCAGTG 1 cut(s) 754
BtsIMutI CAGTG 2 cut(s) 754, 1465
BveI ACCTGC 3 cut(s) 556, 781, 1296
Cac8I GCNNGC 3 cut(s) 43, 1142, 1224
CciI TCATGA 1 cut(s) 318
CfoI GCGC 7 cut(s) 399, 459, 474, 581, 992, 1093, 1407
Cfr10I RCCGGY 3 cut(s) 41, 1082, 1335
CseI GACGC 2 cut(s) 259, 673
Csp6I GTAC 6 cut(s) 121, 256, 603, 825, 955, 1531
CspAI ACCGGT 1 cut(s) 1335
CspCI CAANNNNNGTGG 2 cut(s) 1290, 1325
CviAII CATG 6 cut(s) 319, 403, 538, 968, 1247, 1307
CviQI GTAC 6 cut(s) 121, 256, 603, 825, 955, 1531
DdeI CTNAG 4 cut(s) 704, 777, 828, 840
DinI GGCGCC 1 cut(s) 580
DpnI GATC 3 cut(s) 71, 771, 1233
DpnII GATC 3 cut(s) 69, 769, 1231
EaeI YGGCCR 3 cut(s) 39, 530, 1074
EagI CGGCCG 2 cut(s) 39, 530
Eam1104I CTCTTC 2 cut(s) 483, 549
EarI CTCTTC 2 cut(s) 483, 549
EciI GGCGGA 3 cut(s) 60, 221, 274
Ecl136II GAGCTC 1 cut(s) 1359
EclXI CGGCCG 2 cut(s) 39, 530
Eco130I CCWWGG 4 cut(s) 7, 537, 618, 1508
Eco147I AGGCCT 1 cut(s) 206
Eco24I GRGCYC 2 cut(s) 908, 1361
Eco31I GGTCTC 1 cut(s) 485
Eco47I GGWCC 5 cut(s) 4, 217, 406, 1118, 1505
Eco47III AGCGCT 2 cut(s) 398, 473
Eco52I CGGCCG 2 cut(s) 39, 530
Eco53kI GAGCTC 1 cut(s) 1359
Eco88I CYCGRG 3 cut(s) 446, 467, 503
EcoICRI GAGCTC 1 cut(s) 1359
EcoO109I RGGNCCY 2 cut(s) 385, 1118
EcoRII CCWGG 2 cut(s) 329, 582
EcoT14I CCWWGG 4 cut(s) 7, 537, 618, 1508
EcoT38I GRGCYC 2 cut(s) 908, 1361
EgeI GGCGCC 1 cut(s) 580
EheI GGCGCC 1 cut(s) 580
ErhI CCWWGG 4 cut(s) 7, 537, 618, 1508
FaeI CATG 6 cut(s) 322, 406, 541, 971, 1250, 1310
FaqI GGGAC 1 cut(s) 1131
FatI CATG 6 cut(s) 318, 402, 537, 967, 1246, 1306
FauI CCCGC 1 cut(s) 422
FbaI TGATCA 1 cut(s) 1231
FokI GGATG 8 cut(s) 161, 506, 751, 1007, 1043, 1205, 1336, 1414
FriOI GRGCYC 2 cut(s) 908, 1361
FspI TGCGCA 1 cut(s) 1406
GlaI GCGC 7 cut(s) 398, 458, 473, 580, 991, 1092, 1406
GsaI CCCAGC 3 cut(s) 20, 756, 1254
GsuI CTGGAG 3 cut(s) 86, 236, 1298
HaeII RGCGCY 4 cut(s) 400, 475, 582, 1094
HapII CCGG 8 cut(s) 42, 92, 325, 477, 529, 1083, 1211, 1336
HgaI GACGC 2 cut(s) 259, 673
HhaI GCGC 7 cut(s) 399, 459, 474, 581, 992, 1093, 1407
Hin1I GRCGYC 2 cut(s) 579, 665
Hin1II CATG 6 cut(s) 322, 406, 541, 971, 1250, 1310
Hin6I GCGC 7 cut(s) 397, 457, 472, 579, 990, 1091, 1405
HinP1I GCGC 7 cut(s) 397, 457, 472, 579, 990, 1091, 1405
HincII GTYRAC 2 cut(s) 306, 643
HindII GTYRAC 2 cut(s) 306, 643
HinfI GANTC 6 cut(s) 112, 437, 463, 897, 979, 1327
HpaII CCGG 8 cut(s) 42, 92, 325, 477, 529, 1083, 1211, 1336
HphI GGTGA 2 cut(s) 184, 412
Hpy166II GTNNAC 4 cut(s) 306, 313, 340, 643
Hpy188I TCNGA 5 cut(s) 69, 485, 843, 1134, 1323
Hpy188III TCNNGA 7 cut(s) 103, 160, 319, 371, 467, 1022, 1096
Hpy8I GTNNAC 4 cut(s) 306, 313, 340, 643
Hpy99I CGWCG 6 cut(s) 29, 350, 437, 667, 673, 1357
HpyAV CCTTC 2 cut(s) 78, 1251
HpyCH4III ACNGT 3 cut(s) 310, 1418, 1460
HpyCH4IV ACGT 2 cut(s) 24, 123
HpyCH4V TGCA 8 cut(s) 514, 599, 648, 747, 790, 1242, 1291, 1463
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 35, 506, 1088, 1297
HpyF3I CTNAG 4 cut(s) 704, 777, 828, 840
HpySE526I ACGT 2 cut(s) 24, 123
Hsp92I GRCGYC 2 cut(s) 579, 665
Hsp92II CATG 6 cut(s) 322, 406, 541, 971, 1250, 1310
HspAI GCGC 7 cut(s) 397, 457, 472, 579, 990, 1091, 1405
KasI GGCGCC 1 cut(s) 578
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
Ksp22I TGATCA 1 cut(s) 1231
Kzo9I GATC 3 cut(s) 69, 769, 1231
LmnI GCTCC 6 cut(s) 249, 287, 479, 720, 1024, 1364
Lsp1109I GCAGC 5 cut(s) 47, 75, 660, 1134, 1156
LweI GCATC 2 cut(s) 501, 1392
MaeII ACGT 2 cut(s) 24, 123
MaeIII GTNAC 2 cut(s) 190, 1454
MalI GATC 3 cut(s) 71, 771, 1233
MboI GATC 3 cut(s) 69, 769, 1231
MboII GAAGA 6 cut(s) 289, 500, 566, 1054, 1152, 1294
MfeI CAATTG 1 cut(s) 883
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 2 cut(s) 908, 1361
MlsI TGGCCA 1 cut(s) 1076
MluCI AATT 4 cut(s) 128, 727, 844, 883
MluNI TGGCCA 1 cut(s) 1076
Mly113I GGCGCC 1 cut(s) 579
MlyI GAGTC 4 cut(s) 431, 906, 973, 1321
Mox20I TGGCCA 1 cut(s) 1076
MroNI GCCGGC 1 cut(s) 41
MscI TGGCCA 1 cut(s) 1076
MseI TTAA 4 cut(s) 182, 197, 657, 1173
Msp20I TGGCCA 1 cut(s) 1076
MspA1I CMGCKG 2 cut(s) 38, 1147
MspI CCGG 8 cut(s) 42, 92, 325, 477, 529, 1083, 1211, 1336
MspR9I CCNGG 5 cut(s) 325, 331, 529, 584, 1211
MunI CAATTG 1 cut(s) 883
MvaI CCWGG 2 cut(s) 331, 584
MvnI CGCG 2 cut(s) 987, 992
MwoI GCNNNNNNNGC 5 cut(s) 26, 35, 506, 1088, 1297
NaeI GCCGGC 1 cut(s) 43
NarI GGCGCC 1 cut(s) 579
NciI CCSGG 3 cut(s) 325, 529, 1211
NcoI CCATGG 1 cut(s) 537
NdeII GATC 3 cut(s) 69, 769, 1231
NgoMIV GCCGGC 1 cut(s) 41
NlaIII CATG 6 cut(s) 322, 406, 541, 971, 1250, 1310
NlaIV GGNNCC 5 cut(s) 71, 245, 387, 580, 1119
NmeAIII GCCGAG 2 cut(s) 586, 887
NmuCI GTSAC 1 cut(s) 190
NsbI TGCGCA 1 cut(s) 1406
NspI RCATGY 2 cut(s) 1250, 1310
PaeR7I CTCGAG 2 cut(s) 446, 467
PagI TCATGA 1 cut(s) 318
PceI AGGCCT 1 cut(s) 206
PciI ACATGT 1 cut(s) 1306
PcsI WCGNNNNNNNCGW 3 cut(s) 306, 432, 677
PdiI GCCGGC 1 cut(s) 43
PfeI GAWTC 2 cut(s) 112, 463
PflFI GACNNNGTC 1 cut(s) 667
PfoI TCCNGGA 1 cut(s) 1209
PinAI ACCGGT 1 cut(s) 1335
PleI GAGTC 4 cut(s) 431, 905, 973, 1321
PluTI GGCGCC 1 cut(s) 582
PpsI GAGTC 4 cut(s) 431, 905, 973, 1321
Ppu21I YACGTR 1 cut(s) 124
PpuMI RGGWCCY 1 cut(s) 1118
PscI ACATGT 1 cut(s) 1306
Psp124BI GAGCTC 1 cut(s) 1361
Psp5II RGGWCCY 1 cut(s) 1118
Psp6I CCWGG 2 cut(s) 329, 582
PspFI CCCAGC 3 cut(s) 16, 752, 1250
PspGI CCWGG 2 cut(s) 329, 582
PspN4I GGNNCC 5 cut(s) 71, 245, 387, 580, 1119
PspPPI RGGWCCY 1 cut(s) 1118
PspXI VCTCGAGB 1 cut(s) 446
PstI CTGCAG 2 cut(s) 650, 1293
PsuI RGATCY 1 cut(s) 69
PsyI GACNNNGTC 1 cut(s) 667
PvuII CAGCTG 1 cut(s) 1147
RsaI GTAC 6 cut(s) 122, 257, 604, 826, 956, 1532
RsaNI GTAC 6 cut(s) 121, 256, 603, 825, 955, 1531
SacI GAGCTC 1 cut(s) 1361
SaqAI TTAA 4 cut(s) 182, 197, 657, 1173
Sau3AI GATC 3 cut(s) 69, 769, 1231
ScaI AGTACT 1 cut(s) 826
SchI GAGTC 4 cut(s) 431, 906, 973, 1321
ScrFI CCNGG 5 cut(s) 325, 331, 529, 584, 1211
SduI GDGCHC 2 cut(s) 908, 1361
SfaNI GCATC 2 cut(s) 501, 1392
SfcI CTRYAG 2 cut(s) 646, 1289
SfoI GGCGCC 1 cut(s) 580
Sfr274I CTCGAG 2 cut(s) 446, 467
SinI GGWCC 5 cut(s) 4, 217, 406, 1118, 1505
SlaI CTCGAG 2 cut(s) 446, 467
SmlI CTYRAG 5 cut(s) 116, 380, 446, 467, 1094
SmoI CTYRAG 5 cut(s) 116, 380, 446, 467, 1094
Sse9I AATT 4 cut(s) 128, 727, 844, 883
SseBI AGGCCT 1 cut(s) 206
SspDI GGCGCC 1 cut(s) 578
SstI GAGCTC 1 cut(s) 1361
StuI AGGCCT 1 cut(s) 206
StyD4I CCNGG 5 cut(s) 323, 329, 527, 582, 1209
StyI CCWWGG 4 cut(s) 7, 537, 618, 1508
TaaI ACNGT 3 cut(s) 310, 1418, 1460
TaiI ACGT 2 cut(s) 27, 126
TaqI TCGA 8 cut(s) 201, 348, 432, 447, 468, 895, 1061, 1355
TasI AATT 4 cut(s) 128, 727, 844, 883
TatI WGTACW 3 cut(s) 255, 824, 954
TauI GCSGC 5 cut(s) 15, 41, 545, 548, 990
TfiI GAWTC 2 cut(s) 112, 463
Tru1I TTAA 4 cut(s) 182, 197, 657, 1173
Tru9I TTAA 4 cut(s) 182, 197, 657, 1173
TscAI CASTG 2 cut(s) 754, 1465
TseFI GTSAC 1 cut(s) 190
TseI GCWGC 5 cut(s) 35, 88, 648, 1144, 1147
Tsp45I GTSAC 1 cut(s) 190
TspDTI ATGAA 4 cut(s) 163, 391, 785, 956
TspRI CASTG 2 cut(s) 754, 1465
Tth111I GACNNNGTC 1 cut(s) 667
VpaK11BI GGWCC 5 cut(s) 4, 217, 406, 1118, 1505
XceI RCATGY 2 cut(s) 1250, 1310
XcmI CCANNNNNNNNNTGG 1 cut(s) 931
XhoI CTCGAG 2 cut(s) 446, 467
ZrmI AGTACT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.