Rh6DG414900

3-ketoacyl-CoA synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0010704
Physical Location & Seq
Forward (+)
59930585 .. 59932135
1551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG414900.1

Sequence Viewer

Length: 1551 bp
ATGGACCAAGGCGGCCCAGCCCACGTCGCCGCCGCGGCCGGCGGAGGAGGTCAGGTCGGGGTTCGGATCCACCAAGCCCGAAGGCTGCCGGATTTCCTCCAGAGCGTGAATCTCAAGTACGTGAAATTAGGCTACCATTATCTCATCTCCAATCTCTTGACCTTGTGCTTCATCCCCTTAATCATCGTCACCTTAATCGAGGCCTCCCAAATGGACCTCCACGACCTCCGCCACCTGTGGCTCCACCTCCAGTACAACCTCGTCAGCGTCATCATCTGCTCCGCCGTCCTCGTCTTCGGGTTGACCGTATACATCATGACCCGGCCCAGGCCCATTTACCTCGTCGATTACTCCTGCTACCGCCCTCCCGACCACCTCAAGGCCCCCCACCAGCGCTTCATGGACCACTCCCGCCTCACCAACGACTTCGACGACTCCTCGCTCGAGTTCCAGCGCAAGATTCTCGAGCGCTCCGGCCTCGGAGAAGAGACCTACGTCCCCGAAGCGATGCACCACATCCCTCCCCGGCCGTCCATGGCGGCGGCCAGGGAAGAGGCCGAGCAGGTTATGTACGGCGCCCTGGATAATCTGTTTGCAAGTACCAATGTCAAGCCCAAGGATATTGGGATTCTTGTTGTCAACTGCAGCCTGTTTAACCCGACGCCGTCGCTGTCGGCGATGATTGTGAATAAGTATAAGCTGAGGGGGAACATTAGGAGCTTCAATTTGGGAGGGATGGGTTGCAGTGCTGGGGTTATAGCTGTTGATCTTGCTAAGGACTTGTTGCAGATTCATAGGAATACTTATGCTGTTGTGGTCAGTACTGAGAACATTACTCAGAATTGGTATTTTGGGAATAAGAAGTCTATGTTGATACCCAATTGCTTGTTTCGAGTTGGGGGCTCGGCGGTTTTGCTGTCCAATAAGTCTGTGGATAGGAGGAGGGCCAAGTACACGCTTGTTCATGTTGTGAGGACTCATCGCGGTGCCGATGACAAGGCGTTTCGCTGTGTTTATCAGGAGCAGGATGATAAGGGCAAGACTGGTGTTTCTTTGTCCAAAGATTTGATGGCCATTGCCGGTGGGGCGCTCAAGACTAACATAACTACTTTGGGACCTATTGTGCTTCCCATAAGCGAGCAGCTGCTTTTCTTTTCTTCTCTTGTGGTTAAGAAGCTGTTGAATGGGGATGTCAAGCCGTATATCCCCGATTTCAAGCTGGCATTTGATCATTTCTGCATACATGCTGGCGGAAGGGCTGTGATTGATGAGCTGGAGAAGAACCTGCAGTTGTTGCCAATACATGTGGAGGCTTCTCGGATGACTCTACACCGGTTTGGGAATACTTCGTCGAGCTCCATTTGGTATGAGTTGGCCTATACAGAGGCCAAAGGGAGGATGCGCAAGGGCAACCGTGTCTGGCAGATTGCCTTTGGTAGTGGTTTCAAATGCAACAGTGCAGTCTGGGAGGCTCTGCGGAATGTGAAGCCATCTCATAATGGTCCTTGGGAGGACAGCATTGACAAGTACCCCGTGAAACTAGTTTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00062 ko01110 map00062 map01110
Pfam Domains
Protein Families
ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

516

Amino Acids

57.66

Weight (kDa)

9.25

Isoelectric Point (pI)

36.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAE1_CUT1_RppA PF08392 104 - 393 1.3e-145 FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C PF08541 410 - 490 3.4e-11 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C PF02797 412 - 483 1.1e-08 Chalcone and stilbene synthases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1403
Acc36I ACCTGC 2 cut(s) 553, 1293
AccB1I GGYRCC 2 cut(s) 575, 986
AccI GTMKAC 1 cut(s) 309
AccII CGCG 2 cut(s) 35, 984
AclWI GGATC 2 cut(s) 61, 74
AcoI YGGCCR 4 cut(s) 36, 527, 543, 1071
AcyI GRCGYC 2 cut(s) 576, 662
AfaI GTAC 7 cut(s) 119, 254, 572, 601, 823, 953, 1529
AfeI AGCGCT 2 cut(s) 395, 470
AfiI CCNNNNNNNGG 3 cut(s) 327, 379, 1395
AflIII ACRYGT 1 cut(s) 1303
AgeI ACCGGT 1 cut(s) 1332
AgsI TTSAA 4 cut(s) 724, 1183, 1216, 1447
AhlI ACTAGT 1 cut(s) 1540
AjiI CACGTC 1 cut(s) 25
AjnI CCWGG 3 cut(s) 326, 545, 579
AluBI AGCT 8 cut(s) 700, 720, 761, 1144, 1177, 1219, 1273, 1356
AluI AGCT 8 cut(s) 700, 720, 761, 1144, 1177, 1219, 1273, 1356
Alw21I GWGCWC 1 cut(s) 1358
Alw26I GTCTC 1 cut(s) 482
AlwI GGATC 2 cut(s) 61, 74
Ama87I CYCGRG 2 cut(s) 443, 464
Aor51HI AGCGCT 2 cut(s) 395, 470
ApeKI GCWGC 4 cut(s) 85, 645, 1141, 1144
AsiGI ACCGGT 1 cut(s) 1332
AspLEI GCGC 6 cut(s) 396, 456, 471, 578, 1090, 1404
AsuC2I CCSGG 2 cut(s) 322, 526
AsuHPI GGTGA 2 cut(s) 181, 409
AvaI CYCGRG 2 cut(s) 443, 464
AvaII GGWCC 5 cut(s) 4, 214, 403, 1115, 1502
BalI TGGCCA 1 cut(s) 1073
BamHI GGATCC 1 cut(s) 66
BanI GGYRCC 2 cut(s) 575, 986
BanII GRGCYC 2 cut(s) 905, 1358
BbsI GAAGAC 1 cut(s) 286
Bbv12I GWGCWC 1 cut(s) 1358
BbvCI CCTCAGC 1 cut(s) 701
BbvI GCAGC 4 cut(s) 72, 657, 1131, 1153
BccI CCATC 3 cut(s) 730, 1063, 1498
BceAI ACGGC 5 cut(s) 269, 514, 589, 649, 1183
BcgI CGANNNNNNTGC 2 cut(s) 445, 479
BciT130I CCWGG 3 cut(s) 328, 547, 581
BclI TGATCA 1 cut(s) 1228
BcnI CCSGG 2 cut(s) 322, 526
BcoDI GTCTC 1 cut(s) 482
BcuI ACTAGT 1 cut(s) 1540
BfaI CTAG 1 cut(s) 1541
BfmI CTRYAG 2 cut(s) 643, 1286
BfoI RGCGCY 4 cut(s) 397, 472, 579, 1091
BfuAI ACCTGC 2 cut(s) 553, 1293
BglI GCCNNNNNGGC 2 cut(s) 35, 1085
BmcAI AGTACT 1 cut(s) 823
Bme1390I CCNGG 5 cut(s) 322, 328, 526, 547, 581
Bme18I GGWCC 5 cut(s) 4, 214, 403, 1115, 1502
BmeT110I CYCGRG 2 cut(s) 443, 464
BmgBI CACGTC 1 cut(s) 25
BmiI GGNNCC 6 cut(s) 68, 242, 384, 577, 988, 1116
BmrFI CCNGG 5 cut(s) 322, 328, 526, 547, 581
BmsI GCATC 2 cut(s) 498, 1389
BoxI GACNNNNGTC 1 cut(s) 494
BpiI GAAGAC 1 cut(s) 286
BpmI CTGGAG 3 cut(s) 83, 233, 1295
Bpu10I CCTNAGC 2 cut(s) 701, 774
BpuEI CTTGAG 3 cut(s) 98, 362, 1076
BpuMI CCSGG 2 cut(s) 322, 526
BsaAI YACGTR 1 cut(s) 121
BsaHI GRCGYC 2 cut(s) 576, 662
BsaI GGTCTC 1 cut(s) 482
BsaWI WCCGGW 1 cut(s) 1332
BsaXI ACNNNNNCTCC 2 cut(s) 39, 69
Bsc4I CCNNNNNNNGG 3 cut(s) 327, 379, 1395
Bse118I RCCGGY 3 cut(s) 38, 1079, 1332
Bse1I ACTGG 2 cut(s) 250, 1048
Bse3DI GCAATG 1 cut(s) 1074
BseBI CCWGG 3 cut(s) 328, 547, 581
BseGI GGATG 7 cut(s) 171, 516, 741, 1033, 1195, 1326, 1404
BseLI CCNNNNNNNGG 3 cut(s) 327, 379, 1395
BseMI GCAATG 1 cut(s) 1074
BseMII CTCAG 3 cut(s) 692, 816, 851
BseNI ACTGG 2 cut(s) 250, 1048
BseRI GAGGAG 3 cut(s) 60, 427, 955
BseX3I CGGCCG 2 cut(s) 36, 527
BseXI GCAGC 4 cut(s) 72, 657, 1131, 1153
BseYI CCCAGC 2 cut(s) 16, 749
BsgI GTGCAG 1 cut(s) 1479
Bsh1236I CGCG 2 cut(s) 35, 984
Bsh1285I CGRYCG 2 cut(s) 39, 530
BshNI GGYRCC 2 cut(s) 575, 986
BshTI ACCGGT 1 cut(s) 1332
BsiEI CGRYCG 2 cut(s) 39, 530
BsiHKAI GWGCWC 1 cut(s) 1358
BsiHKCI CYCGRG 2 cut(s) 443, 464
BsiSI CCGG 7 cut(s) 39, 89, 322, 474, 526, 1080, 1333
BslFI GGGAC 2 cut(s) 482, 1128
BslI CCNNNNNNNGG 3 cut(s) 327, 379, 1395
BsmAI GTCTC 1 cut(s) 482
BsmFI GGGAC 2 cut(s) 482, 1128
Bso31I GGTCTC 1 cut(s) 482
BsoBI CYCGRG 2 cut(s) 443, 464
Bsp1286I GDGCHC 2 cut(s) 905, 1358
Bsp143I GATC 3 cut(s) 66, 766, 1228
Bsp19I CCATGG 1 cut(s) 534
BspCNI CTCAG 3 cut(s) 693, 817, 850
BspFNI CGCG 2 cut(s) 35, 984
BspHI TCATGA 1 cut(s) 315
BspLI GGNNCC 6 cut(s) 68, 242, 384, 577, 988, 1116
BspMAI CTGCAG 2 cut(s) 647, 1290
BspMI ACCTGC 2 cut(s) 553, 1293
BspPI GGATC 2 cut(s) 61, 74
BspT107I GGYRCC 2 cut(s) 575, 986
BspTNI GGTCTC 1 cut(s) 482
BsrDI GCAATG 1 cut(s) 1074
BsrFI RCCGGY 3 cut(s) 38, 1079, 1332
BsrI ACTGG 2 cut(s) 250, 1048
BssAI RCCGGY 3 cut(s) 38, 1079, 1332
BssMI GATC 3 cut(s) 66, 766, 1228
BssNAI GTATAC 1 cut(s) 310
BssNI GRCGYC 2 cut(s) 576, 662
BssT1I CCWWGG 4 cut(s) 7, 534, 615, 1505
Bst1107I GTATAC 1 cut(s) 310
Bst2UI CCWGG 3 cut(s) 328, 547, 581
Bst4CI ACNGT 3 cut(s) 307, 1415, 1457
Bst6I CTCTTC 2 cut(s) 480, 546
BstACI GRCGYC 2 cut(s) 576, 662
BstAPI GCANNNNNTGC 1 cut(s) 1294
BstBAI YACGTR 1 cut(s) 121
BstC8I GCNNGC 4 cut(s) 40, 1139, 1221, 1249
BstDEI CTNAG 4 cut(s) 701, 774, 825, 837
BstDSI CCRYGG 2 cut(s) 33, 534
BstF5I GGATG 7 cut(s) 171, 516, 741, 1033, 1195, 1326, 1404
BstFNI CGCG 2 cut(s) 35, 984
BstH2I RGCGCY 4 cut(s) 397, 472, 579, 1091
BstHHI GCGC 6 cut(s) 396, 456, 471, 578, 1090, 1404
BstKTI GATC 3 cut(s) 69, 769, 1231
BstMAI GTCTC 1 cut(s) 482
BstMBI GATC 3 cut(s) 66, 766, 1228
BstMCI CGRYCG 2 cut(s) 39, 530
BstMWI GCNNNNNNNGC 4 cut(s) 26, 35, 1085, 1294
BstNI CCWGG 3 cut(s) 328, 547, 581
BstNSI RCATGY 2 cut(s) 1247, 1307
BstPAI GACNNNNGTC 1 cut(s) 494
BstSCI CCNGG 5 cut(s) 320, 326, 524, 545, 579
BstSFI CTRYAG 2 cut(s) 643, 1286
BstUI CGCG 2 cut(s) 35, 984
BstV1I GCAGC 4 cut(s) 72, 657, 1131, 1153
BstV2I GAAGAC 1 cut(s) 286
BstX2I RGATCY 1 cut(s) 66
BstYI RGATCY 1 cut(s) 66
BstZ17I GTATAC 1 cut(s) 310
BstZI CGGCCG 2 cut(s) 36, 527
BtgI CCRYGG 2 cut(s) 33, 534
BtgZI GCGATG 3 cut(s) 521, 692, 965
BtrI CACGTC 1 cut(s) 25
BtsCI GGATG 7 cut(s) 171, 516, 741, 1033, 1195, 1326, 1404
BtsI GCAGTG 1 cut(s) 751
BtsIMutI CAGTG 2 cut(s) 751, 1462
BveI ACCTGC 2 cut(s) 553, 1293
Cac8I GCNNGC 4 cut(s) 40, 1139, 1221, 1249
CciI TCATGA 1 cut(s) 315
CfoI GCGC 6 cut(s) 396, 456, 471, 578, 1090, 1404
Cfr10I RCCGGY 3 cut(s) 38, 1079, 1332
Cfr42I CCGCGG 1 cut(s) 36
CseI GACGC 2 cut(s) 256, 670
Csp6I GTAC 7 cut(s) 118, 253, 571, 600, 822, 952, 1528
CspAI ACCGGT 1 cut(s) 1332
CspCI CAANNNNNGTGG 2 cut(s) 1287, 1322
CviAII CATG 6 cut(s) 316, 400, 535, 965, 1244, 1304
CviQI GTAC 7 cut(s) 118, 253, 571, 600, 822, 952, 1528
DdeI CTNAG 4 cut(s) 701, 774, 825, 837
DinI GGCGCC 1 cut(s) 577
DpnI GATC 3 cut(s) 68, 768, 1230
DpnII GATC 3 cut(s) 66, 766, 1228
EaeI YGGCCR 4 cut(s) 36, 527, 543, 1071
EagI CGGCCG 2 cut(s) 36, 527
Eam1104I CTCTTC 2 cut(s) 480, 546
EarI CTCTTC 2 cut(s) 480, 546
EciI GGCGGA 4 cut(s) 57, 218, 271, 1266
Ecl136II GAGCTC 1 cut(s) 1356
EclXI CGGCCG 2 cut(s) 36, 527
Eco130I CCWWGG 4 cut(s) 7, 534, 615, 1505
Eco147I AGGCCT 1 cut(s) 203
Eco24I GRGCYC 2 cut(s) 905, 1358
Eco31I GGTCTC 1 cut(s) 482
Eco47I GGWCC 5 cut(s) 4, 214, 403, 1115, 1502
Eco47III AGCGCT 2 cut(s) 395, 470
Eco52I CGGCCG 2 cut(s) 36, 527
Eco53kI GAGCTC 1 cut(s) 1356
Eco88I CYCGRG 2 cut(s) 443, 464
EcoICRI GAGCTC 1 cut(s) 1356
EcoO109I RGGNCCY 2 cut(s) 382, 1115
EcoRII CCWGG 3 cut(s) 326, 545, 579
EcoT14I CCWWGG 4 cut(s) 7, 534, 615, 1505
EcoT38I GRGCYC 2 cut(s) 905, 1358
EgeI GGCGCC 1 cut(s) 577
EheI GGCGCC 1 cut(s) 577
ErhI CCWWGG 4 cut(s) 7, 534, 615, 1505
FaeI CATG 6 cut(s) 319, 403, 538, 968, 1247, 1307
FaqI GGGAC 2 cut(s) 482, 1128
FatI CATG 6 cut(s) 315, 399, 534, 964, 1243, 1303
FauI CCCGC 1 cut(s) 419
FbaI TGATCA 1 cut(s) 1228
FblI GTMKAC 1 cut(s) 309
FokI GGATG 7 cut(s) 158, 503, 748, 1040, 1202, 1333, 1411
FriOI GRGCYC 2 cut(s) 905, 1358
FspBI CTAG 1 cut(s) 1541
FspI TGCGCA 1 cut(s) 1403
GlaI GCGC 6 cut(s) 395, 455, 470, 577, 1089, 1403
GsaI CCCAGC 2 cut(s) 20, 753
GsuI CTGGAG 3 cut(s) 83, 233, 1295
HaeII RGCGCY 4 cut(s) 397, 472, 579, 1091
HapII CCGG 7 cut(s) 39, 89, 322, 474, 526, 1080, 1333
HgaI GACGC 2 cut(s) 256, 670
HhaI GCGC 6 cut(s) 396, 456, 471, 578, 1090, 1404
Hin1I GRCGYC 2 cut(s) 576, 662
Hin1II CATG 6 cut(s) 319, 403, 538, 968, 1247, 1307
Hin6I GCGC 6 cut(s) 394, 454, 469, 576, 1088, 1402
HinP1I GCGC 6 cut(s) 394, 454, 469, 576, 1088, 1402
HincII GTYRAC 2 cut(s) 303, 640
HindII GTYRAC 2 cut(s) 303, 640
HinfI GANTC 7 cut(s) 109, 434, 460, 628, 790, 976, 1324
HpaII CCGG 7 cut(s) 39, 89, 322, 474, 526, 1080, 1333
HphI GGTGA 2 cut(s) 181, 409
Hpy166II GTNNAC 4 cut(s) 303, 310, 640, 954
Hpy188I TCNGA 4 cut(s) 66, 482, 840, 1320
Hpy188III TCNNGA 7 cut(s) 100, 157, 316, 368, 464, 1019, 1093
Hpy8I GTNNAC 4 cut(s) 303, 310, 640, 954
Hpy99I CGWCG 6 cut(s) 29, 347, 434, 664, 670, 1354
HpyAV CCTTC 2 cut(s) 75, 1248
HpyCH4III ACNGT 3 cut(s) 307, 1415, 1457
HpyCH4IV ACGT 3 cut(s) 24, 120, 495
HpyCH4V TGCA 9 cut(s) 511, 596, 645, 744, 787, 1239, 1288, 1452, 1460
HpyF10VI GCNNNNNNNGC 4 cut(s) 26, 35, 1085, 1294
HpyF3I CTNAG 4 cut(s) 701, 774, 825, 837
HpySE526I ACGT 3 cut(s) 24, 120, 495
Hsp92I GRCGYC 2 cut(s) 576, 662
Hsp92II CATG 6 cut(s) 319, 403, 538, 968, 1247, 1307
HspAI GCGC 6 cut(s) 394, 454, 469, 576, 1088, 1402
KasI GGCGCC 1 cut(s) 575
KroI GCCGGC 1 cut(s) 38
KroNI GCCGGC 1 cut(s) 40
Ksp22I TGATCA 1 cut(s) 1228
KspI CCGCGG 1 cut(s) 36
Kzo9I GATC 3 cut(s) 66, 766, 1228
LmnI GCTCC 6 cut(s) 246, 284, 476, 717, 1021, 1361
Lsp1109I GCAGC 4 cut(s) 72, 657, 1131, 1153
LweI GCATC 2 cut(s) 498, 1389
MaeI CTAG 1 cut(s) 1541
MaeII ACGT 3 cut(s) 24, 120, 495
MaeIII GTNAC 1 cut(s) 187
MalI GATC 3 cut(s) 68, 768, 1230
MboI GATC 3 cut(s) 66, 766, 1228
MboII GAAGA 5 cut(s) 286, 497, 563, 1149, 1291
MfeI CAATTG 1 cut(s) 880
MflI RGATCY 1 cut(s) 66
MhlI GDGCHC 2 cut(s) 905, 1358
MlsI TGGCCA 1 cut(s) 1073
MluCI AATT 4 cut(s) 125, 724, 841, 880
MluNI TGGCCA 1 cut(s) 1073
Mly113I GGCGCC 1 cut(s) 576
MlyI GAGTC 3 cut(s) 428, 970, 1318
Mox20I TGGCCA 1 cut(s) 1073
MroNI GCCGGC 1 cut(s) 38
MscI TGGCCA 1 cut(s) 1073
MseI TTAA 4 cut(s) 179, 194, 654, 1170
MslI CAYNNNNRTG 1 cut(s) 984
Msp20I TGGCCA 1 cut(s) 1073
MspA1I CMGCKG 2 cut(s) 35, 1144
MspI CCGG 7 cut(s) 39, 89, 322, 474, 526, 1080, 1333
MspR9I CCNGG 5 cut(s) 322, 328, 526, 547, 581
MunI CAATTG 1 cut(s) 880
MvaI CCWGG 3 cut(s) 328, 547, 581
MvnI CGCG 2 cut(s) 35, 984
MwoI GCNNNNNNNGC 4 cut(s) 26, 35, 1085, 1294
NaeI GCCGGC 1 cut(s) 40
NarI GGCGCC 1 cut(s) 576
NciI CCSGG 2 cut(s) 322, 526
NcoI CCATGG 1 cut(s) 534
NdeII GATC 3 cut(s) 66, 766, 1228
NgoMIV GCCGGC 1 cut(s) 38
NlaIII CATG 6 cut(s) 319, 403, 538, 968, 1247, 1307
NlaIV GGNNCC 6 cut(s) 68, 242, 384, 577, 988, 1116
NmeAIII GCCGAG 2 cut(s) 583, 884
NmuCI GTSAC 1 cut(s) 187
NsbI TGCGCA 1 cut(s) 1403
NspI RCATGY 2 cut(s) 1247, 1307
PaeR7I CTCGAG 2 cut(s) 443, 464
PagI TCATGA 1 cut(s) 315
PceI AGGCCT 1 cut(s) 203
PciI ACATGT 1 cut(s) 1303
PcsI WCGNNNNNNNCGW 3 cut(s) 303, 429, 674
PdiI GCCGGC 1 cut(s) 40
PfeI GAWTC 4 cut(s) 109, 460, 628, 790
PflFI GACNNNGTC 1 cut(s) 664
PinAI ACCGGT 1 cut(s) 1332
PleI GAGTC 3 cut(s) 428, 970, 1318
PluTI GGCGCC 1 cut(s) 579
PpsI GAGTC 3 cut(s) 428, 970, 1318
Ppu21I YACGTR 1 cut(s) 121
PpuMI RGGWCCY 1 cut(s) 1115
PscI ACATGT 1 cut(s) 1303
PshAI GACNNNNGTC 1 cut(s) 494
Psp124BI GAGCTC 1 cut(s) 1358
Psp5II RGGWCCY 1 cut(s) 1115
Psp6I CCWGG 3 cut(s) 326, 545, 579
PspFI CCCAGC 2 cut(s) 16, 749
PspGI CCWGG 3 cut(s) 326, 545, 579
PspN4I GGNNCC 6 cut(s) 68, 242, 384, 577, 988, 1116
PspPPI RGGWCCY 1 cut(s) 1115
PspXI VCTCGAGB 1 cut(s) 443
PstI CTGCAG 2 cut(s) 647, 1290
PsuI RGATCY 1 cut(s) 66
PsyI GACNNNGTC 1 cut(s) 664
PvuII CAGCTG 1 cut(s) 1144
RsaI GTAC 7 cut(s) 119, 254, 572, 601, 823, 953, 1529
RsaNI GTAC 7 cut(s) 118, 253, 571, 600, 822, 952, 1528
RseI CAYNNNNRTG 1 cut(s) 984
SacI GAGCTC 1 cut(s) 1358
SacII CCGCGG 1 cut(s) 36
SaqAI TTAA 4 cut(s) 179, 194, 654, 1170
Sau3AI GATC 3 cut(s) 66, 766, 1228
ScaI AGTACT 1 cut(s) 823
SchI GAGTC 3 cut(s) 428, 970, 1318
ScrFI CCNGG 5 cut(s) 322, 328, 526, 547, 581
SduI GDGCHC 2 cut(s) 905, 1358
SfaNI GCATC 2 cut(s) 498, 1389
SfcI CTRYAG 2 cut(s) 643, 1286
SfoI GGCGCC 1 cut(s) 577
Sfr274I CTCGAG 2 cut(s) 443, 464
Sfr303I CCGCGG 1 cut(s) 36
SgrBI CCGCGG 1 cut(s) 36
SinI GGWCC 5 cut(s) 4, 214, 403, 1115, 1502
SlaI CTCGAG 2 cut(s) 443, 464
SmiMI CAYNNNNRTG 1 cut(s) 984
SmlI CTYRAG 5 cut(s) 113, 377, 443, 464, 1091
SmoI CTYRAG 5 cut(s) 113, 377, 443, 464, 1091
SpeI ACTAGT 1 cut(s) 1540
Sse9I AATT 4 cut(s) 125, 724, 841, 880
SseBI AGGCCT 1 cut(s) 203
SspDI GGCGCC 1 cut(s) 575
SspMI CTAG 1 cut(s) 1541
SstI GAGCTC 1 cut(s) 1358
StuI AGGCCT 1 cut(s) 203
StyD4I CCNGG 5 cut(s) 320, 326, 524, 545, 579
StyI CCWWGG 4 cut(s) 7, 534, 615, 1505
TaaI ACNGT 3 cut(s) 307, 1415, 1457
TaiI ACGT 3 cut(s) 27, 123, 498
TaqI TCGA 7 cut(s) 198, 345, 429, 444, 465, 892, 1352
TasI AATT 4 cut(s) 125, 724, 841, 880
TatI WGTACW 3 cut(s) 252, 821, 951
TauI GCSGC 6 cut(s) 15, 32, 35, 38, 542, 545
TfiI GAWTC 4 cut(s) 109, 460, 628, 790
Tru1I TTAA 4 cut(s) 179, 194, 654, 1170
Tru9I TTAA 4 cut(s) 179, 194, 654, 1170
TscAI CASTG 2 cut(s) 751, 1462
TseFI GTSAC 1 cut(s) 187
TseI GCWGC 4 cut(s) 85, 645, 1141, 1144
Tsp45I GTSAC 1 cut(s) 187
TspDTI ATGAA 4 cut(s) 160, 388, 782, 953
TspRI CASTG 2 cut(s) 751, 1462
Tth111I GACNNNGTC 1 cut(s) 664
VpaK11BI GGWCC 5 cut(s) 4, 214, 403, 1115, 1502
XceI RCATGY 2 cut(s) 1247, 1307
XcmI CCANNNNNNNNNTGG 2 cut(s) 928, 1066
XhoI CTCGAG 2 cut(s) 443, 464
XmiI GTMKAC 1 cut(s) 309
XspI CTAG 1 cut(s) 1541
ZrmI AGTACT 1 cut(s) 823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.