Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0005298

Physical Location & Seq

Genomic Coordinates Reverse (-)

11829523 .. 11846330

Gene Structure 16808 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016988

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2592 bp

ATGCAAGGAGTGGCGGCTTTAGCAATGTCTTCTGTAATACGTGGGCGACTGACAAGGAGGACCACTGTTTGCTTCAGTGTATCTGTCTCTACAGACGTTACTCGTAGCTATAATGGACTCAGTCATTCTGGGTCAACAGTTCTTCTTGGGAGGCTCGTCAATTGCGGCCTTGGCTTTCTTGATGACCCAATCGACGACCTTGCTGGGCCGGTCGTATCCGAGTCGGTCTTGCACGTCGTAGAATTGAATGGCGGTGTGGGCGGCGAGCCGGACGCGGTGGTCCCTGGGGCCTTTGGCGGTGTAGACCTTGCTGTGGCGGTCCTTCCGGGCAAGATGGATCCAGATGCAGTCAAATCCACTCTCCAAAACCTAGCATTTGGAAATGTAATGGCCGCCGCTGCCCGCAATTACCAGAAGGAAATTCTCGCCGAAGGAAAAGCTCCGGCCACCAGCTCCGGCGACCAGGAGGTCGACCTTGACGACCTCATGGATGATCCTGAGCTGGAAAAATTGCACGCGGATCGAATTGCAGCTCTCAAGAGAGAAGCTGAGAAGAGGGAAGCTCTGAAGAGGCAAGGACATGGAGAGTATAGGGAAATTACTGAGGGGGATTTCTTAGGTGAAGTTACTGGGAGCGAGAAGGCCATCTGCCACTTTTATCATAGAGAATTTTACAGATGCAAGATAATGGACAAGCATTTGAAGACCCTTGCTTTAAAGCATGTTGATACCAAGTTCATGAAGCTGGATGCCGAGAATGCGCCCTTCTTCGTCACTAAGCTAGGAGTCAAAACTCTGCCTTGTGTCATAATATTCAGAAAAGGAGTTGCTGTGGATAGGCTGATTGGATTTATTGATATGGGTGGAAAAGATGATTTCAGCACAAGGGCACTTGAGGTTGTCCTAATCAAGAAAGGTATAATTAGTGAGAAGAAAGAAGAAGACGAAGATGATGATTGTCTTGAAGGTGGTCGCAGGACGGGGGAATGTAAGTGCGGGCATTCGGGCAGGGCTTTGGTTCTGGATCCCTGCATCTGTGATTCAAGTTCTTTGTTTTCTTCTGCAAGTTCTGTTAGAGTAGCAAAAGAAGGTTCTGTAACCATGTCTGGACCTCAATCCACAAAGCAAGAGGTCGAAATCTCTGAGGAAGAGAGAAAGACTAGGATTGGGTCATTGAAGAAGAAAGCATTGACTGCTTCTGCCAGATTCAGAAACTCTTTCACAAGAAAGCATAGGAGAAGCCAGAGTAGAGTCTTGTCTGTAGAAATCGAGGATGTGCATGACCTTGAGGAGATAAAGGCTGTTGATTCGCTTCGTCAGGCACTTATAACGGAGGAGCTTCTTCCTCCCAAACACGATGATTATCATAAGATGCTGAGGTTTATACCTCTAATTTTCTTGCAATACTATCCTCAAGGACATCATGGAGTTGACAAGGATGGACGACCTGTGTATATTGAGAGAATAGGCCTAGTGGATGTAACCAAGCTGATGCAAACCACTACAATAGACCGCTATGTGAAATACCATGTCCGCGAGTTTGAAAGGACATTTAATGTTAAGTTCCCAGCTTGTTCAATAGCAGCAAAGAAACACATTGATCAAAGTACAACTATTTTGGATGTGCAAGGAGTGGGACTTAAAAACTTCAATAAAGCTGCCAGGGAACTTATCACTTGCCTTCAGACTATTGATATTCCTGTCAGGATCGGACCATATATGTTATTAACCGGTGAAAGTTATATACTTATATTCCTCCAGGTCCTTGGTAACAAGAGCAAGTTACTTGAAATAATTGATGCTAGTGAGTTGCCAGAATTTTTAGGAGGTACATGTACTTGCGCTGATCAAGGAGGCTGTATGCGTTCTGATAAGGGCCCCTGGAAGGACCAAATGATAATGACGATGGTCCAGAATGGTGTTCATGAATGTGCAAGGAAACCTACCGTTCAAATAAGTGAGATGAAGATGATACCAGAGGGACGTGACGCAGCTGGTGTGCAACCTGTGTCTCCTAGACGTTCTCACTTTCACAAAGAATTATCCATGAGTGAAAGTATCCAAGGAACTTTCAAGTATCCCCCAACTGCAGGTTCAACTTGGCAAATGGCGGTTAAGAATGGCAAAGCAGGAGGTTGTTATGATGCTCCCAAAGTTTATGATGGATTCAGCTCTCAGATTTGTGCTGCTATTATGACCTTTCTTATGGGGATTGTCACTATGGTCAAACTAACCCGTAACATGCCAAAGAGGCTCACTGATTCCACCTTCTACTCGAGCACTGTTTACGGTGATGACACAGCGTTCAAAAACCAGCCTTCACGCTCTACCATCTCCAGTACAGAGCTCATGTCTGTCATAAAACGTATGGCTGAATTGGAAGAGAGAGTTAAACCACCTGCCAGGCCAAGTAAGAAGGAGGAACTTCTGAATGCTGCTATAGGCCGAGTTGATGCCTTGGAGCATGAGCTTATGGCAACAAAGAAGGCTCTTCGCGAGTCACTTGCCCGACAAGACGAGATCTTGGGACCCAAGAAAAACAAGAAGAACAAGAAGAAGAGAATGATGAAATTTATGTGTTATCATGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0008525 GO:0008526 GO:0009653 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044424 GO:0044464 GO:0044703 GO:0048193 GO:0048468 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0071702 GO:0071840 GO:0120009 GO:0120010 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

864

Amino Acids

95.59

Weight (kDa)

8.55

Isoelectric Point (pI)

46.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO	PF00650	468 - 563	1.1e-08	CRAL/TRIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005298)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50960 AT3G50960 AT5G66410
fragaria_vesca	FvH4_1g12650 FvH4_1g12650 FvH4_1g12650 FvH4_1g12650 FvH4_5g33310
malus_domestica	MD02G1141000.v1.1 MD15G1253500.v1.1
prunus_persica	Prupe.5G010500_v2.0.a1 Prupe.5G010500_v2.0.a1 Prupe.6G150600_v2.0.a1 Prupe.6G150600_v2.0.a1
pyrus_communis	pycom02g11100 pycom15g22330
rosa_chinensis	RchiOBHm_Chr2g0100611
rosa_laevigata	RLG00000016988
rosa_multiflora	Rmu_sc0000528.1_g000004 Rmu_sc0001497.1_g000002
rosa_roxburghii	Rroxscaffold_2G00142090
rosa_rugosa	Rorug02G0090200 Rorug02G0090300 Rorug02G0090400
rosa_samantha	Rh2AG139100 Rh2BG142400 Rh2CG144700 Rh2DG144100
rosa_wichuraiana	Rw2G010900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1328
AarI	CACCTGC	1 cut(s)	2407
AasI	GACNNNNNNGTC	2 cut(s)	278, 467
Acc36I	ACCTGC	2 cut(s)	2081, 2407
AccI	GTMKAC	2 cut(s)	303, 471
AccII	CGCG	4 cut(s)	275, 518, 1536, 2496
AclWI	GGATC	7 cut(s)	332, 345, 488, 528, 1019, 1032, 1715
AcoI	YGGCCR	2 cut(s)	390, 444
AcsI	RAATTY	4 cut(s)	420, 668, 1817, 2570
AcuI	CTGAAG	3 cut(s)	58, 587, 1667
AfaI	GTAC	4 cut(s)	1609, 1831, 1837, 2341
AfiI	CCNNNNNNNGG	3 cut(s)	313, 1885, 2090
AflIII	ACRYGT	1 cut(s)	1832
AgeI	ACCGGT	1 cut(s)	1730
AjiI	CACGTC	2 cut(s)	235, 1985
AjnI	CCWGG	6 cut(s)	283, 462, 1661, 1758, 1880, 2402
AjuI	GAANNNNNNNTTGG	2 cut(s)	2077, 2109
Alw21I	GWGCWC	2 cut(s)	2282, 2349
Alw26I	GTCTC	2 cut(s)	91, 2016
AlwI	GGATC	7 cut(s)	332, 345, 488, 528, 1019, 1032, 1715
Ama87I	CYCGRG	1 cut(s)	2275
ApaI	GGGCCC	1 cut(s)	1880
ApeKI	GCWGC	7 cut(s)	398, 530, 1583, 1658, 1991, 2186, 2435
ApoI	RAATTY	4 cut(s)	420, 668, 1817, 2570
AsiGI	ACCGGT	1 cut(s)	1730
AspLEI	GCGC	2 cut(s)	763, 1844
AsuC2I	CCSGG	1 cut(s)	327
AsuHPI	GGTGA	3 cut(s)	632, 1745, 2303
AvaI	CYCGRG	1 cut(s)	2275
AvaII	GGWCC	9 cut(s)	60, 280, 319, 1109, 1712, 1762, 1888, 1909, 2528
BaeGI	GKGCMC	2 cut(s)	892, 1880
BamHI	GGATCC	2 cut(s)	337, 1024
BanII	GRGCYC	2 cut(s)	1880, 2349
BbsI	GAAGAC	3 cut(s)	21, 710, 948
Bbv12I	GWGCWC	2 cut(s)	2282, 2349
BbvCI	CCTCAGC	1 cut(s)	1376
BbvI	GCAGC	7 cut(s)	385, 542, 1595, 1645, 2003, 2173, 2422
BccI	CCATC	6 cut(s)	328, 653, 1433, 1900, 2156, 2339
BcgI	CGANNNNNNTGC	6 cut(s)	182, 216, 503, 537, 2486, 2520
BciT130I	CCWGG	6 cut(s)	285, 464, 1663, 1760, 1882, 2404
BciVI	GTATCC	3 cut(s)	226, 2069, 2088
BclI	TGATCA	2 cut(s)	1600, 1846
BcnI	CCSGG	1 cut(s)	327
BcoDI	GTCTC	2 cut(s)	91, 2016
BfaI	CTAG	6 cut(s)	371, 782, 1161, 1472, 1803, 2016
BfmI	CTRYAG	4 cut(s)	90, 1260, 2088, 2439
BfuAI	ACCTGC	2 cut(s)	2081, 2407
BfuI	GTATCC	3 cut(s)	226, 2069, 2088
BglI	GCCNNNNNGGC	1 cut(s)	2251
BglII	AGATCT	1 cut(s)	2520
Bme1390I	CCNGG	7 cut(s)	285, 327, 464, 1663, 1760, 1882, 2404
Bme18I	GGWCC	9 cut(s)	60, 280, 319, 1109, 1712, 1762, 1888, 1909, 2528
BmeT110I	CYCGRG	1 cut(s)	2275
BmgBI	CACGTC	2 cut(s)	235, 1985
BmiI	GGNNCC	8 cut(s)	282, 289, 339, 1026, 1878, 1879, 2529, 2530
BmrFI	CCNGG	7 cut(s)	285, 327, 464, 1663, 1760, 1882, 2404
BmrI	ACTGGG	1 cut(s)	639
BmsI	GCATC	9 cut(s)	334, 668, 739, 1041, 1362, 1482, 1789, 2134, 2443
BmuI	ACTGGG	1 cut(s)	639
BoxI	GACNNNNGTC	1 cut(s)	1907
BpiI	GAAGAC	3 cut(s)	21, 710, 948
BplI	GAGNNNNNCTC	2 cut(s)	547, 579
BpmI	CTGGAG	2 cut(s)	1742, 2320
Bpu10I	CCTNAGC	2 cut(s)	498, 1376
BpuEI	CTTGAG	4 cut(s)	521, 914, 1307, 1398
BpuMI	CCSGG	1 cut(s)	327
BsaAI	YACGTR	1 cut(s)	41
BsaBI	GATNNNNATC	1 cut(s)	1362
BsaJI	CCNNGG	8 cut(s)	169, 283, 284, 1662, 1765, 1880, 2062, 2457
BsaWI	WCCGGW	1 cut(s)	1730
BsaXI	ACNNNNNCTCC	2 cut(s)	816, 846
Bsc4I	CCNNNNNNNGG	3 cut(s)	313, 1885, 2090
Bse118I	RCCGGY	2 cut(s)	208, 1730
Bse1I	ACTGG	2 cut(s)	634, 2337
Bse3DI	GCAATG	1 cut(s)	30
Bse8I	GATNNNNATC	1 cut(s)	1362
BseBI	CCWGG	6 cut(s)	285, 464, 1663, 1760, 1882, 2404
BseDI	CCNNGG	8 cut(s)	169, 283, 284, 1662, 1765, 1880, 2062, 2457
BseGI	GGATG	6 cut(s)	496, 754, 1279, 1444, 1483, 1627
BseJI	GATNNNNATC	1 cut(s)	1362
BseLI	CCNNNNNNNGG	3 cut(s)	313, 1885, 2090
BseMI	GCAATG	1 cut(s)	30
BseMII	CTCAG	7 cut(s)	133, 489, 540, 594, 1134, 1367, 2189
BseNI	ACTGG	2 cut(s)	634, 2337
BseRI	GAGGAG	2 cut(s)	1304, 1349
BseSI	GKGCMC	2 cut(s)	892, 1880
BseXI	GCAGC	7 cut(s)	385, 542, 1595, 1645, 2003, 2173, 2422
BseYI	CCCAGC	2 cut(s)	203, 1567
Bsh1236I	CGCG	4 cut(s)	275, 518, 1536, 2496
Bsh1285I	CGRYCG	1 cut(s)	213
BshTI	ACCGGT	1 cut(s)	1730
BsiEI	CGRYCG	1 cut(s)	213
BsiHKAI	GWGCWC	2 cut(s)	2282, 2349
BsiHKCI	CYCGRG	1 cut(s)	2275
BsiSI	CCGG	6 cut(s)	209, 269, 326, 443, 456, 1731
BslFI	GGGAC	4 cut(s)	266, 1650, 1995, 2541
BslI	CCNNNNNNNGG	3 cut(s)	313, 1885, 2090
BsmAI	GTCTC	2 cut(s)	91, 2016
BsmFI	GGGAC	4 cut(s)	266, 1650, 1995, 2541
BsmI	GAATGC	3 cut(s)	763, 1000, 2437
BsoBI	CYCGRG	1 cut(s)	2275
Bsp120I	GGGCCC	1 cut(s)	1876
Bsp1286I	GDGCHC	4 cut(s)	892, 1880, 2282, 2349
Bsp143I	GATC	8 cut(s)	337, 493, 520, 1024, 1600, 1707, 1846, 2520
Bsp68I	TCGCGA	1 cut(s)	2496
BspCNI	CTCAG	7 cut(s)	132, 490, 541, 595, 1135, 1368, 2188
BspFNI	CGCG	4 cut(s)	275, 518, 1536, 2496
BspHI	TCATGA	2 cut(s)	738, 1924
BspLI	GGNNCC	8 cut(s)	282, 289, 339, 1026, 1878, 1879, 2529, 2530
BspMAI	CTGCAG	1 cut(s)	2092
BspMI	ACCTGC	2 cut(s)	2081, 2407
BspPI	GGATC	7 cut(s)	332, 345, 488, 528, 1019, 1032, 1715
BspQI	GCTCTTC	1 cut(s)	2496
BsrDI	GCAATG	1 cut(s)	30
BsrFI	RCCGGY	2 cut(s)	208, 1730
BsrI	ACTGG	2 cut(s)	634, 2337
BssAI	RCCGGY	2 cut(s)	208, 1730
BssECI	CCNNGG	8 cut(s)	169, 283, 284, 1662, 1765, 1880, 2062, 2457
BssMI	GATC	8 cut(s)	337, 493, 520, 1024, 1600, 1707, 1846, 2520
BssT1I	CCWWGG	4 cut(s)	169, 1765, 2062, 2457
Bst2UI	CCWGG	6 cut(s)	285, 464, 1663, 1760, 1882, 2404
Bst4CI	ACNGT	5 cut(s)	67, 139, 1948, 2284, 2291
Bst6I	CTCTTC	6 cut(s)	548, 563, 1143, 2376, 2496, 2552
BstAPI	GCANNNNNTGC	1 cut(s)	1193
BstBAI	YACGTR	1 cut(s)	41
BstC8I	GCNNGC	4 cut(s)	266, 403, 516, 998
BstDEI	CTNAG	9 cut(s)	119, 498, 549, 603, 616, 777, 1143, 1376, 2175
BstF5I	GGATG	6 cut(s)	496, 754, 1279, 1444, 1483, 1627
BstFNI	CGCG	4 cut(s)	275, 518, 1536, 2496
BstHHI	GCGC	2 cut(s)	763, 1844
BstKTI	GATC	8 cut(s)	340, 496, 523, 1027, 1603, 1710, 1849, 2523
BstMAI	GTCTC	2 cut(s)	91, 2016
BstMBI	GATC	8 cut(s)	337, 493, 520, 1024, 1600, 1707, 1846, 2520
BstMCI	CGRYCG	1 cut(s)	213
BstMWI	GCNNNNNNNGC	7 cut(s)	20, 171, 258, 398, 758, 1193, 2251
BstNI	CCWGG	6 cut(s)	285, 464, 1663, 1760, 1882, 2404
BstNSI	RCATGY	3 cut(s)	725, 1836, 2245
BstPAI	GACNNNNGTC	1 cut(s)	1907
BstSCI	CCNGG	7 cut(s)	283, 325, 462, 1661, 1758, 1880, 2402
BstSFI	CTRYAG	4 cut(s)	90, 1260, 2088, 2439
BstSLI	GKGCMC	2 cut(s)	892, 1880
BstUI	CGCG	4 cut(s)	275, 518, 1536, 2496
BstV1I	GCAGC	7 cut(s)	385, 542, 1595, 1645, 2003, 2173, 2422
BstV2I	GAAGAC	3 cut(s)	21, 710, 948
BstX2I	RGATCY	3 cut(s)	337, 1024, 2520
BstXI	CCANNNNNNTGG	1 cut(s)	1766
BstYI	RGATCY	3 cut(s)	337, 1024, 2520
BsuI	GTATCC	3 cut(s)	226, 2069, 2088
BtrI	CACGTC	2 cut(s)	235, 1985
BtsCI	GGATG	6 cut(s)	496, 754, 1279, 1444, 1483, 1627
BtsIMutI	CAGTG	4 cut(s)	63, 82, 2256, 2280
BtuMI	TCGCGA	1 cut(s)	2496
BveI	ACCTGC	2 cut(s)	2081, 2407
Cac8I	GCNNGC	4 cut(s)	266, 403, 516, 998
CciI	TCATGA	2 cut(s)	738, 1924
CfoI	GCGC	2 cut(s)	763, 1844
Cfr10I	RCCGGY	2 cut(s)	208, 1730
CseI	GACGC	2 cut(s)	281, 1997
Csp6I	GTAC	4 cut(s)	1608, 1830, 1836, 2340
CspAI	ACCGGT	1 cut(s)	1730
CviQI	GTAC	4 cut(s)	1608, 1830, 1836, 2340
DdeI	CTNAG	9 cut(s)	119, 498, 549, 603, 616, 777, 1143, 1376, 2175
DpnI	GATC	8 cut(s)	339, 495, 522, 1026, 1602, 1709, 1848, 2522
DpnII	GATC	8 cut(s)	337, 493, 520, 1024, 1600, 1707, 1846, 2520
DraI	TTTAAA	1 cut(s)	717
DrdI	GACNNNNNNGTC	2 cut(s)	278, 467
DseDI	GACNNNNNNGTC	2 cut(s)	278, 467
EaeI	YGGCCR	2 cut(s)	390, 444
Eam1104I	CTCTTC	6 cut(s)	548, 563, 1143, 2376, 2496, 2552
EarI	CTCTTC	6 cut(s)	548, 563, 1143, 2376, 2496, 2552
Ecl136II	GAGCTC	1 cut(s)	2347
Eco130I	CCWWGG	4 cut(s)	169, 1765, 2062, 2457
Eco147I	AGGCCT	1 cut(s)	1470
Eco24I	GRGCYC	2 cut(s)	1880, 2349
Eco47I	GGWCC	9 cut(s)	60, 280, 319, 1109, 1712, 1762, 1888, 1909, 2528
Eco53kI	GAGCTC	1 cut(s)	2347
Eco57I	CTGAAG	3 cut(s)	58, 587, 1667
Eco88I	CYCGRG	1 cut(s)	2275
EcoICRI	GAGCTC	1 cut(s)	2347
EcoO109I	RGGNCCY	5 cut(s)	288, 1762, 1876, 1877, 2528
EcoRII	CCWGG	6 cut(s)	283, 462, 1661, 1758, 1880, 2402
EcoT14I	CCWWGG	4 cut(s)	169, 1765, 2062, 2457
EcoT38I	GRGCYC	2 cut(s)	1880, 2349
ErhI	CCWWGG	4 cut(s)	169, 1765, 2062, 2457
FaqI	GGGAC	4 cut(s)	266, 1650, 1995, 2541
FauI	CCCGC	2 cut(s)	410, 989
FbaI	TGATCA	2 cut(s)	1600, 1846
FblI	GTMKAC	2 cut(s)	303, 471
FokI	GGATG	6 cut(s)	503, 761, 1286, 1451, 1490, 1634
FriOI	GRGCYC	2 cut(s)	1880, 2349
FspBI	CTAG	6 cut(s)	371, 782, 1161, 1472, 1803, 2016
GlaI	GCGC	2 cut(s)	762, 1843
GsaI	CCCAGC	2 cut(s)	207, 1571
GsuI	CTGGAG	2 cut(s)	1742, 2320
HapII	CCGG	6 cut(s)	209, 269, 326, 443, 456, 1731
HgaI	GACGC	2 cut(s)	281, 1997
HhaI	GCGC	2 cut(s)	763, 1844
Hin6I	GCGC	2 cut(s)	761, 1842
HinP1I	GCGC	2 cut(s)	761, 1842
HincII	GTYRAC	3 cut(s)	135, 472, 1432
HindII	GTYRAC	3 cut(s)	135, 472, 1432
HpaII	CCGG	6 cut(s)	209, 269, 326, 443, 456, 1731
HphI	GGTGA	3 cut(s)	632, 1745, 2303
Hpy166II	GTNNAC	5 cut(s)	135, 304, 472, 1432, 2287
Hpy8I	GTNNAC	5 cut(s)	135, 304, 472, 1432, 2287
Hpy99I	CGWCG	2 cut(s)	197, 239
HpyCH4III	ACNGT	5 cut(s)	67, 139, 1948, 2284, 2291
HpyCH4IV	ACGT	6 cut(s)	40, 96, 234, 1984, 2020, 2365
HpyF10VI	GCNNNNNNNGC	7 cut(s)	20, 171, 258, 398, 758, 1193, 2251
HpyF3I	CTNAG	9 cut(s)	119, 498, 549, 603, 616, 777, 1143, 1376, 2175
HpySE526I	ACGT	6 cut(s)	40, 96, 234, 1984, 2020, 2365
HspAI	GCGC	2 cut(s)	761, 1842
KflI	GGGWCCC	1 cut(s)	2528
Ksp22I	TGATCA	2 cut(s)	1600, 1846
Kzo9I	GATC	8 cut(s)	337, 493, 520, 1024, 1600, 1707, 1846, 2520
LguI	GCTCTTC	1 cut(s)	2496
LmnI	GCTCC	6 cut(s)	445, 458, 633, 1336, 2152, 2461
Lsp1109I	GCAGC	7 cut(s)	385, 542, 1595, 1645, 2003, 2173, 2422
LweI	GCATC	9 cut(s)	334, 668, 739, 1041, 1362, 1482, 1789, 2134, 2443
MaeI	CTAG	6 cut(s)	371, 782, 1161, 1472, 1803, 2016
MaeII	ACGT	6 cut(s)	40, 96, 234, 1984, 2020, 2365
MalI	GATC	8 cut(s)	339, 495, 522, 1026, 1602, 1709, 1848, 2522
MboI	GATC	8 cut(s)	337, 493, 520, 1024, 1600, 1707, 1846, 2520
MfeI	CAATTG	1 cut(s)	160
MflI	RGATCY	3 cut(s)	337, 1024, 2520
MhlI	GDGCHC	4 cut(s)	892, 1880, 2282, 2349
MlyI	GAGTC	5 cut(s)	111, 230, 795, 1260, 2507
MseI	TTAA	7 cut(s)	716, 1554, 1560, 1641, 1727, 2115, 2391
MslI	CAYNNNNRTG	1 cut(s)	1929
MspA1I	CMGCKG	2 cut(s)	398, 1994
MspI	CCGG	6 cut(s)	209, 269, 326, 443, 456, 1731
MspR9I	CCNGG	7 cut(s)	285, 327, 464, 1663, 1760, 1882, 2404
MunI	CAATTG	1 cut(s)	160
Mva1269I	GAATGC	3 cut(s)	763, 1000, 2437
MvaI	CCWGG	6 cut(s)	285, 464, 1663, 1760, 1882, 2404
MvnI	CGCG	4 cut(s)	275, 518, 1536, 2496
MwoI	GCNNNNNNNGC	7 cut(s)	20, 171, 258, 398, 758, 1193, 2251
NciI	CCSGG	1 cut(s)	327
NdeII	GATC	8 cut(s)	337, 493, 520, 1024, 1600, 1707, 1846, 2520
NlaIV	GGNNCC	8 cut(s)	282, 289, 339, 1026, 1878, 1879, 2529, 2530
NmeAIII	GCCGAG	2 cut(s)	778, 2471
NmuCI	GTSAC	4 cut(s)	772, 1985, 2215, 2499
NruI	TCGCGA	1 cut(s)	2496
NspI	RCATGY	3 cut(s)	725, 1836, 2245
PaeR7I	CTCGAG	1 cut(s)	2275
PagI	TCATGA	2 cut(s)	738, 1924
PaqCI	CACCTGC	1 cut(s)	2407
PasI	CCCWGGG	1 cut(s)	284
PceI	AGGCCT	1 cut(s)	1470
PciI	ACATGT	1 cut(s)	1832
PciSI	GCTCTTC	1 cut(s)	2496
PcsI	WCGNNNNNNNCGW	1 cut(s)	477
PctI	GAATGC	3 cut(s)	763, 1000, 2437
PfeI	GAWTC	5 cut(s)	1040, 1206, 1307, 2166, 2261
PflFI	GACNNNGTC	1 cut(s)	120
PinAI	ACCGGT	1 cut(s)	1730
PleI	GAGTC	5 cut(s)	111, 229, 794, 1259, 2506
PpsI	GAGTC	5 cut(s)	111, 229, 794, 1259, 2506
Ppu21I	YACGTR	1 cut(s)	41
PpuMI	RGGWCCY	2 cut(s)	1762, 2528
PscI	ACATGT	1 cut(s)	1832
PshAI	GACNNNNGTC	1 cut(s)	1907
PsiI	TTATAA	1 cut(s)	1328
Psp124BI	GAGCTC	1 cut(s)	2349
Psp5II	RGGWCCY	2 cut(s)	1762, 2528
Psp6I	CCWGG	6 cut(s)	283, 462, 1661, 1758, 1880, 2402
PspFI	CCCAGC	2 cut(s)	203, 1567
PspGI	CCWGG	6 cut(s)	283, 462, 1661, 1758, 1880, 2402
PspN4I	GGNNCC	8 cut(s)	282, 289, 339, 1026, 1878, 1879, 2529, 2530
PspOMI	GGGCCC	1 cut(s)	1876
PspPPI	RGGWCCY	2 cut(s)	1762, 2528
PspXI	VCTCGAGB	1 cut(s)	2275
PstI	CTGCAG	1 cut(s)	2092
PsuI	RGATCY	3 cut(s)	337, 1024, 2520
PsyI	GACNNNGTC	1 cut(s)	120
PvuII	CAGCTG	1 cut(s)	1994
RruI	TCGCGA	1 cut(s)	2496
RsaI	GTAC	4 cut(s)	1609, 1831, 1837, 2341
RsaNI	GTAC	4 cut(s)	1608, 1830, 1836, 2340
RseI	CAYNNNNRTG	1 cut(s)	1929
SacI	GAGCTC	1 cut(s)	2349
SalI	GTCGAC	1 cut(s)	470
SapI	GCTCTTC	1 cut(s)	2496
SaqAI	TTAA	7 cut(s)	716, 1554, 1560, 1641, 1727, 2115, 2391
Sau3AI	GATC	8 cut(s)	337, 493, 520, 1024, 1600, 1707, 1846, 2520
SchI	GAGTC	5 cut(s)	111, 230, 795, 1260, 2507
ScrFI	CCNGG	7 cut(s)	285, 327, 464, 1663, 1760, 1882, 2404
SduI	GDGCHC	4 cut(s)	892, 1880, 2282, 2349
SfaNI	GCATC	9 cut(s)	334, 668, 739, 1041, 1362, 1482, 1789, 2134, 2443
SfcI	CTRYAG	4 cut(s)	90, 1260, 2088, 2439
Sfr274I	CTCGAG	1 cut(s)	2275
SinI	GGWCC	9 cut(s)	60, 280, 319, 1109, 1712, 1762, 1888, 1909, 2528
SlaI	CTCGAG	1 cut(s)	2275
SmiMI	CAYNNNNRTG	1 cut(s)	1929
SmlI	CTYRAG	5 cut(s)	536, 893, 1286, 1413, 2275
SmoI	CTYRAG	5 cut(s)	536, 893, 1286, 1413, 2275
SseBI	AGGCCT	1 cut(s)	1470
SspI	AATATT	1 cut(s)	813
SspMI	CTAG	6 cut(s)	371, 782, 1161, 1472, 1803, 2016
SstI	GAGCTC	1 cut(s)	2349
StuI	AGGCCT	1 cut(s)	1470
StyD4I	CCNGG	7 cut(s)	283, 325, 462, 1661, 1758, 1880, 2402
StyI	CCWWGG	4 cut(s)	169, 1765, 2062, 2457
TaaI	ACNGT	5 cut(s)	67, 139, 1948, 2284, 2291
TaiI	ACGT	6 cut(s)	43, 99, 237, 1987, 2023, 2368
TaqI	TCGA	6 cut(s)	192, 471, 523, 1134, 1269, 2276
TaqII	GACCGA	1 cut(s)	214
TatI	WGTACW	3 cut(s)	1607, 1835, 2339
TauI	GCSGC	5 cut(s)	17, 168, 264, 395, 398
TfiI	GAWTC	5 cut(s)	1040, 1206, 1307, 2166, 2261
Tru1I	TTAA	7 cut(s)	716, 1554, 1560, 1641, 1727, 2115, 2391
Tru9I	TTAA	7 cut(s)	716, 1554, 1560, 1641, 1727, 2115, 2391
TscAI	CASTG	4 cut(s)	70, 82, 2263, 2287
TseFI	GTSAC	4 cut(s)	772, 1985, 2215, 2499
TseI	GCWGC	7 cut(s)	398, 530, 1583, 1658, 1991, 2186, 2435
Tsp45I	GTSAC	4 cut(s)	772, 1985, 2215, 2499
TspDTI	ATGAA	6 cut(s)	727, 755, 1913, 1941, 1979, 2582
TspGWI	ACGGA	1 cut(s)	1346
TspRI	CASTG	4 cut(s)	70, 82, 2263, 2287
Tth111I	GACNNNGTC	1 cut(s)	120
VpaK11BI	GGWCC	9 cut(s)	60, 280, 319, 1109, 1712, 1762, 1888, 1909, 2528
XapI	RAATTY	4 cut(s)	420, 668, 1817, 2570
XceI	RCATGY	3 cut(s)	725, 1836, 2245
XhoI	CTCGAG	1 cut(s)	2275
XmiI	GTMKAC	2 cut(s)	303, 471
XspI	CTAG	6 cut(s)	371, 782, 1161, 1472, 1803, 2016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.