Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005298

Physical Location & Seq

Genomic Coordinates Forward (+)

7180854 .. 7184864

Gene Structure 4011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0090200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2673 bp

ATGACGGTTCTTAGGTCGCGGGAGATTGCCCCGCCCAAAACGACGCCGCATGGCCCCAAAACGCGGCCCAAATCAGACCCATCCACGCCAGCCGAAACCCCCGAGTCCGTTACTACTACTACCCCTCCGCCTCTTAATTCCACCCCTTCCTCCCAATCCCAAAACCCTAATTCCAATCCCAATCCCAGTCCGAAGGCCACCGATTCGGGCTCTGCCACCGGATTATTGCGGCGGCGGAGTCTCCGTCTCGCTTCGAAAACTCCCGAGGGTTCCGCCAAGAGGAATACCCAAATTGACGAAGTGGGTTTCGATTTGTTTGGAGAGAGGGTTACGGTCATGGGAGTTGAGAAAGGGGCTGAGGAGTTGAAATTGGGTTCTGGGTTAGACCCGGTGACCCGATTGAGTGGGAAAGGTTCGGGCTTTGGAGAGGAGGAGAAGGTTGGAGTTGACGAGGGTTTGACTGAATTAGGGCTTAGTTATGATTTGGGGGTTTTGGGGGGTAATAGTGAGGAGAAGAAGAAGAGGAAGTTGGACATTGATATCAATTTGCCGGCTTGGGAATGTGAAGAGGAAGATGGAGGAAGTAAACCTTTTTTGAGCTTGCGATCGGGGAAGAGAGTTGCTAAGCCAGGAGTGGATGGTGTTGGTAATGGGGAATGCGGAATTGATTTGAGTGCTGATAAGAGTGGTGGTGTGAAGAGCAAAGGTGAATGTGGAAGAGGAGAGAGAGGGGAGGGGAAGTTGGGTGAGAATCGTATTGATGTGGTTGTATTGGATTCGGATTCAGATTCGGAAGTTGAGAGGTCCGGTGAGAATGTGTTTCAGAGTGATCTTCCGAGTGGGGGGAGTTCTACAGGGAAGAGGAAGTTGGGTGATGCAATTGAAGTTGTTGTTGAAGATTCGGAGGATGAAATGAGTTCTGGTGAGAATGGTGTAATTGAGGGCAGAAGGAAGTACAGCAGACAAGAAAAAGGGAAGGAGAAGTTGGTTAGAGGAGCTTTGTTACCGAATGATGATGACAAAGTGGAATTGGGTTTGGGATTAGAAGTGTTGGGTTCATTGCACAATGTGGTTCCCAGTCCTACTCAGATAAGGGAGAATATAGCATTGCAGGATGAGATGCAGGCTAGGAACAGTAATATAAGAGACAATGGAAGAGACAGGAATCAGTACATGGAACGGTTTCGGGACATAGCCAGGCAAAATGCTTCTCGGTTTGCTCGCTTTGATCCTCGAGAGGAAGAGGAGAATGATATGCCTCCTCAGGTTGATGTGGAACAAGATGTTGAAGATTGGCCTGGTCCATTTTCTACTGCGATGAGGATTATGAGAGATGGAGCAGAAAAGAATATGCAAGAGCAGAATGCCTATAAAGGCAAGACAAAACCTGCATTGGTGAACTGGGTTCCCAAGTGTCAGGAACAGGATCGTCCAATATCAAAGAATTTGATCCCCTCATTGCAAGAGTTGTGTTTGTCTGTTCTTGCTAAGAATGCTGATGCAATAGTTTCACTTGAGAGTGTTCCAGATGCTTTGAGGCACCAACTCAGTCATCTGCTCTGTGATTCTAGAAGAATGAATACTCATTTTTTCGAACTTCTTGTTCAAGGATCACCAACAGAGGTTCGCTTAAGGGATTGCTCATGGTTGACAGAGGAAGAGTTCACAAAATCTTTTCAGCAGTGTGACATTAGCAACTTAACAGTACTACAGCTTGACCAATGTGGGCGCTGTCTGCCAGATTATATATTGAATTCTACCTTAGCTCGGTCATCCAATTGCTTGCCCTCTTTAACTTCTTTATCCCTCAGTGGCGCATGTCGTCTTTCGGATGTTGGGTTAGGTGCACTTATTTCTTCTGCCCCTGCACTAAGATCTCTGAATCTCAGCCAGTGCTCCCTTCTCACTTCCTCAAGTATTGACGCTTTAGCTAATTCATTGGGATCAGTGCTGAGGGAACTATATTTAAATGATTGCCAAAGCATTAATGCTATGCTGATATTACCAGCCTTAGAGAAGTTTGAGCATTTGGAGGTGTTGTGGCTGCCTGGCATTGAAAATGTTTGTGATGATTTTATTAAGAAGTTTATTACTGCTCGTGGCCACAATTTGAAGGAGCTTATTTTGACTGATTGCATAAATTTAACGGATTCTTCTGTGAAAGTCATAGCTGAAACTTGTTCTGGGTTATGTGCACTTGACCTAGTTAACTTGGATAAGCTGACAGATTGTACTTTAGGATATCTTGCAAATGGTTGCCGAGCAATTCAAACATTAAAATTTTGTCGCAATTCATTCAGTGATGAAGCTATTGCTGCATTCCTGGAAACTTCTGGAGTGTGTTTGAAAGAACTTTCACTAAATAATATCAAGAAGGTTGGCGATAACACAGCCATATCACTTGCCAAACATTCAAGAAGCTTACATAGTCTGGATCTATCTTGGTGCCGGAATTTGACAGATGAGGCCCTGGGTTTGATTGTGGATAGCTGCCTATCTCTGAAGATGTTAAAACTTTTTGGATGCACTCAGATTACCGATTTGTTTCTGTGCGGCCACTCAAATCCTGAGGTGAAAATCATTGGCGTGAGAATGACTCCAATATTGAAAGATGTTAAGGTGCCTGATCCTGCAGCAGGTCCATTACATTATTCATCAATCTCTTCAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0006997 GO:0007000 GO:0007010 GO:0007017 GO:0007049 GO:0008092 GO:0008150 GO:0008152 GO:0008616 GO:0009058 GO:0009116 GO:0009119 GO:0009163 GO:0009987 GO:0015631 GO:0016043 GO:0016049 GO:0018130 GO:0019438 GO:0022402 GO:0030865 GO:0031122 GO:0032506 GO:0034404 GO:0034641 GO:0034654 GO:0040007 GO:0042455 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046116 GO:0046483 GO:0048285 GO:0048487 GO:0051211 GO:0051301 GO:0055086 GO:0061640 GO:0071704 GO:0071840 GO:0097435 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

890

Amino Acids

96.83

Weight (kDa)

5.16

Isoelectric Point (pI)

49.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005298)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50960 AT3G50960 AT5G66410
fragaria_vesca	FvH4_1g12650 FvH4_1g12650 FvH4_1g12650 FvH4_1g12650 FvH4_5g33310
malus_domestica	MD02G1141000.v1.1 MD15G1253500.v1.1
prunus_persica	Prupe.5G010500_v2.0.a1 Prupe.5G010500_v2.0.a1 Prupe.6G150600_v2.0.a1 Prupe.6G150600_v2.0.a1
pyrus_communis	pycom02g11100 pycom15g22330
rosa_chinensis	RchiOBHm_Chr2g0100611
rosa_laevigata	RLG00000016988
rosa_multiflora	Rmu_sc0000528.1_g000004 Rmu_sc0001497.1_g000002
rosa_roxburghii	Rroxscaffold_2G00142090
rosa_rugosa	Rorug02G0090200 Rorug02G0090300 Rorug02G0090400
rosa_samantha	Rh2AG139100 Rh2BG142400 Rh2CG144700 Rh2DG144100
rosa_wichuraiana	Rw2G010900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1396, 2627
AccB1I	GGYRCC	3 cut(s)	1539, 2445, 2620
AccII	CGCG	2 cut(s)	19, 64
AclWI	GGATC	7 cut(s)	1223, 1434, 1444, 1618, 1951, 2442, 2621
AcoI	YGGCCR	2 cut(s)	2101, 2554
AcsI	RAATTY	5 cut(s)	1444, 1753, 2140, 2279, 2452
AcuI	CTGAAG	1 cut(s)	2522
AcyI	GRCGYC	1 cut(s)	44
AdeI	CACNNNGTG	1 cut(s)	1069
AfaI	GTAC	4 cut(s)	956, 1172, 1707, 2233
AfiI	CCNNNNNNNGG	5 cut(s)	63, 279, 842, 1767, 2636
AflII	CTTAAG	1 cut(s)	1630
AjnI	CCWGG	6 cut(s)	628, 1196, 1297, 2047, 2322, 2469
AjuI	GAANNNNNNNTTGG	6 cut(s)	512, 544, 851, 883, 968, 1000
Alw21I	GWGCWC	3 cut(s)	1849, 1898, 2197
Alw26I	GTCTC	4 cut(s)	245, 251, 1140, 1152
Alw44I	GTGCAC	2 cut(s)	1845, 2193
AlwI	GGATC	7 cut(s)	1223, 1434, 1444, 1618, 1951, 2442, 2621
Ama87I	CYCGRG	3 cut(s)	101, 263, 1233
AoxI	GGCC	7 cut(s)	52, 65, 195, 1295, 2101, 2466, 2554
ApaLI	GTGCAC	2 cut(s)	1845, 2193
ApeKI	GCWGC	4 cut(s)	2044, 2315, 2490, 2633
ApoI	RAATTY	5 cut(s)	1444, 1753, 2140, 2279, 2452
AseI	ATTAAT	1 cut(s)	1986
Asp700I	GAANNNNTTC	1 cut(s)	1182
AspLEI	GCGC	2 cut(s)	1731, 1817
AspS9I	GGNCC	6 cut(s)	53, 66, 804, 1301, 2467, 2639
AsuC2I	CCSGG	1 cut(s)	389
AsuHPI	GGTGA	9 cut(s)	403, 719, 758, 821, 884, 935, 1408, 1605, 2584
AsuII	TTCGAA	2 cut(s)	254, 1593
AvaI	CYCGRG	3 cut(s)	101, 263, 1233
AvaII	GGWCC	3 cut(s)	804, 1301, 2639
AxyI	CCTNAGG	2 cut(s)	1263, 2568
BaeGI	GKGCMC	2 cut(s)	1849, 2197
BalI	TGGCCA	1 cut(s)	2103
BanI	GGYRCC	3 cut(s)	1539, 2445, 2620
BanII	GRGCYC	1 cut(s)	212
BarI	GAAGNNNNNNTAC	2 cut(s)	1564, 1596
BauI	CACGAG	1 cut(s)	2097
Bbv12I	GWGCWC	3 cut(s)	1849, 1898, 2197
BbvCI	CCTCAGC	2 cut(s)	357, 1952
BbvI	GCAGC	4 cut(s)	2031, 2302, 2477, 2645
BccI	CCATC	4 cut(s)	88, 569, 632, 1328
BciT130I	CCWGG	6 cut(s)	630, 1198, 1299, 2049, 2324, 2471
BcnI	CCSGG	1 cut(s)	389
BcoDI	GTCTC	4 cut(s)	245, 251, 1140, 1152
BfaI	CTAG	3 cut(s)	1128, 1569, 2204
BfmI	CTRYAG	3 cut(s)	852, 1709, 2631
BfoI	RGCGCY	1 cut(s)	1732
BfrI	CTTAAG	1 cut(s)	1630
BfuAI	ACCTGC	2 cut(s)	1396, 2627
BglII	AGATCT	1 cut(s)	1874
BisI	GCNGC	9 cut(s)	47, 65, 230, 233, 2045, 2316, 2491, 2554, 2634
BlpI	GCTNAGC	1 cut(s)	624
BlsI	GCNGC	9 cut(s)	48, 66, 231, 234, 2046, 2317, 2492, 2555, 2635
BmcAI	AGTACT	1 cut(s)	1707
Bme1390I	CCNGG	7 cut(s)	389, 630, 1198, 1299, 2049, 2324, 2471
Bme18I	GGWCC	3 cut(s)	804, 1301, 2639
BmeT110I	CYCGRG	3 cut(s)	101, 263, 1233
BmgT120I	GGNCC	6 cut(s)	53, 66, 804, 1301, 2467, 2639
BmiI	GGNNCC	7 cut(s)	55, 271, 1074, 1407, 1541, 2447, 2622
BmrFI	CCNGG	7 cut(s)	389, 630, 1198, 1299, 2049, 2324, 2471
BmrI	ACTGGG	3 cut(s)	180, 1071, 1411
BmsI	GCATC	5 cut(s)	865, 1110, 1489, 1519, 2513
BmuI	ACTGGG	3 cut(s)	180, 1071, 1411
BplI	GAGNNNNNCTC	2 cut(s)	2581, 2613
BpmI	CTGGAG	1 cut(s)	2355
Bpu10I	CCTNAGC	3 cut(s)	357, 1762, 1952
Bpu1102I	GCTNAGC	1 cut(s)	624
Bpu14I	TTCGAA	2 cut(s)	254, 1593
BpuEI	CTTGAG	2 cut(s)	1535, 1897
BpuMI	CCSGG	1 cut(s)	389
BsaHI	GRCGYC	1 cut(s)	44
BsaJI	CCNNGG	3 cut(s)	264, 2469, 2470
BsaWI	WCCGGW	2 cut(s)	218, 806
Bsc4I	CCNNNNNNNGG	5 cut(s)	63, 279, 842, 1767, 2636
Bse118I	RCCGGY	1 cut(s)	550
Bse1I	ACTGG	4 cut(s)	186, 1077, 1406, 1891
Bse21I	CCTNAGG	2 cut(s)	1263, 2568
Bse3DI	GCAATG	3 cut(s)	1058, 1106, 1457
BseBI	CCWGG	6 cut(s)	630, 1198, 1299, 2049, 2324, 2471
BseDI	CCNNGG	3 cut(s)	264, 2469, 2470
BseGI	GGATG	7 cut(s)	80, 643, 913, 1120, 1772, 1837, 2528
BseLI	CCNNNNNNNGG	5 cut(s)	63, 279, 842, 1767, 2636
BseMI	GCAATG	3 cut(s)	1058, 1106, 1457
BseMII	CTCAG	9 cut(s)	348, 1100, 1277, 1561, 1822, 1900, 1943, 2543, 2559
BseNI	ACTGG	4 cut(s)	186, 1077, 1406, 1891
BseRI	GAGGAG	8 cut(s)	374, 443, 446, 524, 735, 1008, 1251, 1259
BseSI	GKGCMC	2 cut(s)	1849, 2197
BseXI	GCAGC	4 cut(s)	2031, 2302, 2477, 2645
BsgI	GTGCAG	1 cut(s)	1851
Bsh1236I	CGCG	2 cut(s)	19, 64
Bsh1285I	CGRYCG	1 cut(s)	608
BshFI	GGCC	7 cut(s)	54, 67, 197, 1297, 2103, 2468, 2556
BshNI	GGYRCC	3 cut(s)	1539, 2445, 2620
BsiEI	CGRYCG	1 cut(s)	608
BsiHKAI	GWGCWC	3 cut(s)	1849, 1898, 2197
BsiHKCI	CYCGRG	3 cut(s)	101, 263, 1233
BsiSI	CCGG	5 cut(s)	219, 389, 551, 807, 2449
BslFI	GGGAC	1 cut(s)	1202
BslI	CCNNNNNNNGG	5 cut(s)	63, 279, 842, 1767, 2636
BsmAI	GTCTC	4 cut(s)	245, 251, 1140, 1152
BsmBI	CGTCTC	1 cut(s)	251
BsmFI	GGGAC	1 cut(s)	1202
BsmI	GAATGC	4 cut(s)	662, 1369, 1498, 2318
BsnI	GGCC	7 cut(s)	54, 67, 197, 1297, 2103, 2468, 2556
BsoBI	CYCGRG	3 cut(s)	101, 263, 1233
Bsp119I	TTCGAA	2 cut(s)	254, 1593
Bsp1286I	GDGCHC	4 cut(s)	212, 1849, 1898, 2197
Bsp1720I	GCTNAGC	1 cut(s)	624
BspANI	GGCC	7 cut(s)	54, 67, 197, 1297, 2103, 2468, 2556
BspCNI	CTCAG	9 cut(s)	349, 1099, 1276, 1560, 1821, 1899, 1944, 2542, 2560
BspFNI	CGCG	2 cut(s)	19, 64
BspLI	GGNNCC	7 cut(s)	55, 271, 1074, 1407, 1541, 2447, 2622
BspMAI	CTGCAG	1 cut(s)	2635
BspMI	ACCTGC	2 cut(s)	1396, 2627
BspPI	GGATC	7 cut(s)	1223, 1434, 1444, 1618, 1951, 2442, 2621
BspQI	GCTCTTC	1 cut(s)	692
BspT104I	TTCGAA	2 cut(s)	254, 1593
BspT107I	GGYRCC	3 cut(s)	1539, 2445, 2620
BspTI	CTTAAG	1 cut(s)	1630
BsrDI	GCAATG	3 cut(s)	1058, 1106, 1457
BsrFI	RCCGGY	1 cut(s)	550
BsrI	ACTGG	4 cut(s)	186, 1077, 1406, 1891
BssAI	RCCGGY	1 cut(s)	550
BssECI	CCNNGG	3 cut(s)	264, 2469, 2470
BssNI	GRCGYC	1 cut(s)	44
BssSI	CACGAG	1 cut(s)	2097
Bst2BI	CACGAG	1 cut(s)	2097
Bst2UI	CCWGG	6 cut(s)	630, 1198, 1299, 2049, 2324, 2471
Bst4CI	ACNGT	5 cut(s)	7, 334, 1136, 1182, 1705
BstACI	GRCGYC	1 cut(s)	44
BstAFI	CTTAAG	1 cut(s)	1630
BstBI	TTCGAA	2 cut(s)	254, 1593
BstC8I	GCNNGC	6 cut(s)	90, 552, 602, 1125, 1222, 1784
BstEII	GGTNACC	1 cut(s)	391
BstENI	CCTNNNNNAGG	1 cut(s)	2634
BstF5I	GGATG	7 cut(s)	80, 643, 913, 1120, 1772, 1837, 2528
BstFNI	CGCG	2 cut(s)	19, 64
BstH2I	RGCGCY	1 cut(s)	1732
BstHHI	GCGC	2 cut(s)	1731, 1817
BstMAI	GTCTC	4 cut(s)	245, 251, 1140, 1152
BstMCI	CGRYCG	1 cut(s)	608
BstMWI	GCNNNNNNNGC	3 cut(s)	1493, 1735, 2315
BstNI	CCWGG	6 cut(s)	630, 1198, 1299, 2049, 2324, 2471
BstNSI	RCATGY	1 cut(s)	1821
BstPI	GGTNACC	1 cut(s)	391
BstSCI	CCNGG	7 cut(s)	387, 628, 1196, 1297, 2047, 2322, 2469
BstSFI	CTRYAG	3 cut(s)	852, 1709, 2631
BstSLI	GKGCMC	2 cut(s)	1849, 2197
BstUI	CGCG	2 cut(s)	19, 64
BstV1I	GCAGC	4 cut(s)	2031, 2302, 2477, 2645
BstX2I	RGATCY	2 cut(s)	1874, 2434
BstYI	RGATCY	2 cut(s)	1874, 2434
Bsu36I	CCTNAGG	2 cut(s)	1263, 2568
BsuRI	GGCC	7 cut(s)	54, 67, 197, 1297, 2103, 2468, 2556
BtgZI	GCGATG	1 cut(s)	1331
BtsCI	GGATG	7 cut(s)	80, 643, 913, 1120, 1772, 1837, 2528
BtsI	GCAGTG	1 cut(s)	1688
BtsIMutI	CAGTG	5 cut(s)	1688, 1816, 1898, 1953, 2305
BveI	ACCTGC	2 cut(s)	1396, 2627
Cac8I	GCNNGC	6 cut(s)	90, 552, 602, 1125, 1222, 1784
CfoI	GCGC	2 cut(s)	1731, 1817
Cfr10I	RCCGGY	1 cut(s)	550
Cfr13I	GGNCC	6 cut(s)	53, 66, 804, 1301, 2467, 2639
CseI	GACGC	2 cut(s)	52, 1931
Csp6I	GTAC	4 cut(s)	955, 1171, 1706, 2232
CviAII	CATG	5 cut(s)	50, 337, 1174, 1644, 1818
CviQI	GTAC	4 cut(s)	955, 1171, 1706, 2232
DraI	TTTAAA	1 cut(s)	1968
DraIII	CACNNNGTG	1 cut(s)	1069
EaeI	YGGCCR	2 cut(s)	2101, 2554
EciI	GGCGGA	3 cut(s)	117, 250, 262
Eco24I	GRGCYC	1 cut(s)	212
Eco32I	GATATC	2 cut(s)	541, 2243
Eco47I	GGWCC	3 cut(s)	804, 1301, 2639
Eco57I	CTGAAG	1 cut(s)	2522
Eco81I	CCTNAGG	2 cut(s)	1263, 2568
Eco88I	CYCGRG	3 cut(s)	101, 263, 1233
Eco91I	GGTNACC	1 cut(s)	391
EcoNI	CCTNNNNNAGG	1 cut(s)	2634
EcoO109I	RGGNCCY	1 cut(s)	2467
EcoO65I	GGTNACC	1 cut(s)	391
EcoRI	GAATTC	1 cut(s)	1753
EcoRII	CCWGG	6 cut(s)	628, 1196, 1297, 2047, 2322, 2469
EcoRV	GATATC	2 cut(s)	541, 2243
EcoT38I	GRGCYC	1 cut(s)	212
Esp3I	CGTCTC	1 cut(s)	251
FaeI	CATG	5 cut(s)	53, 340, 1177, 1647, 1821
FalI	AAGNNNNNCTT	2 cut(s)	574, 606
FaqI	GGGAC	1 cut(s)	1202
FatI	CATG	5 cut(s)	49, 336, 1173, 1643, 1817
FauI	CCCGC	2 cut(s)	12, 39
Fnu4HI	GCNGC	9 cut(s)	47, 65, 230, 233, 2045, 2316, 2491, 2554, 2634
FokI	GGATG	7 cut(s)	67, 650, 920, 1127, 1759, 1844, 2535
FriOI	GRGCYC	1 cut(s)	212
Fsp4HI	GCNGC	9 cut(s)	47, 65, 230, 233, 2045, 2316, 2491, 2554, 2634
FspBI	CTAG	3 cut(s)	1128, 1569, 2204
GlaI	GCGC	2 cut(s)	1730, 1816
GluI	GCNGC	9 cut(s)	47, 65, 230, 233, 2045, 2316, 2491, 2554, 2634
GsuI	CTGGAG	1 cut(s)	2355
HaeII	RGCGCY	1 cut(s)	1732
HaeIII	GGCC	7 cut(s)	54, 67, 197, 1297, 2103, 2468, 2556
HapII	CCGG	5 cut(s)	219, 389, 551, 807, 2449
HgaI	GACGC	2 cut(s)	52, 1931
HhaI	GCGC	2 cut(s)	1731, 1817
Hin1I	GRCGYC	1 cut(s)	44
Hin1II	CATG	5 cut(s)	53, 340, 1177, 1647, 1821
Hin6I	GCGC	2 cut(s)	1729, 1815
HinP1I	GCGC	2 cut(s)	1729, 1815
HincII	GTYRAC	3 cut(s)	448, 1650, 2209
HindII	GTYRAC	3 cut(s)	448, 1650, 2209
HindIII	AAGCTT	1 cut(s)	2419
HpaI	GTTAAC	1 cut(s)	2209
HpaII	CCGG	5 cut(s)	219, 389, 551, 807, 2449
HphI	GGTGA	9 cut(s)	403, 719, 758, 821, 884, 935, 1408, 1605, 2584
Hpy166II	GTNNAC	8 cut(s)	448, 587, 1399, 1650, 1665, 1847, 2195, 2209
Hpy8I	GTNNAC	8 cut(s)	448, 587, 1399, 1650, 1665, 1847, 2195, 2209
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	8 cut(s)	156, 187, 430, 942, 970, 1910, 2107, 2368
HpyCH4III	ACNGT	5 cut(s)	7, 334, 1136, 1182, 1705
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1493, 1735, 2315
Hsp92I	GRCGYC	1 cut(s)	44
Hsp92II	CATG	5 cut(s)	53, 340, 1177, 1647, 1821
HspAI	GCGC	2 cut(s)	1729, 1815
KroI	GCCGGC	1 cut(s)	550
KroNI	GCCGGC	1 cut(s)	552
KspAI	GTTAAC	1 cut(s)	2209
LguI	GCTCTTC	1 cut(s)	692
LmnI	GCTCC	4 cut(s)	995, 1337, 1901, 2116
Lsp1109I	GCAGC	4 cut(s)	2031, 2302, 2477, 2645
LweI	GCATC	5 cut(s)	865, 1110, 1489, 1519, 2513
MaeI	CTAG	3 cut(s)	1128, 1569, 2204
MaeIII	GTNAC	5 cut(s)	109, 328, 391, 1002, 1685
MfeI	CAATTG	2 cut(s)	879, 1777
MflI	RGATCY	2 cut(s)	1874, 2434
MhlI	GDGCHC	4 cut(s)	212, 1849, 1898, 2197
MlsI	TGGCCA	1 cut(s)	2103
MluNI	TGGCCA	1 cut(s)	2103
MlyI	GAGTC	3 cut(s)	113, 247, 2590
MmeI	TCCRAC	2 cut(s)	421, 510
Mox20I	TGGCCA	1 cut(s)	2103
MroNI	GCCGGC	1 cut(s)	550
MroXI	GAANNNNTTC	1 cut(s)	1182
MscI	TGGCCA	1 cut(s)	2103
MslI	CAYNNNNRTG	1 cut(s)	2585
Msp20I	TGGCCA	1 cut(s)	2103
MspCI	CTTAAG	1 cut(s)	1630
MspI	CCGG	5 cut(s)	219, 389, 551, 807, 2449
MspR9I	CCNGG	7 cut(s)	389, 630, 1198, 1299, 2049, 2324, 2471
MunI	CAATTG	2 cut(s)	879, 1777
Mva1269I	GAATGC	4 cut(s)	662, 1369, 1498, 2318
MvaI	CCWGG	6 cut(s)	630, 1198, 1299, 2049, 2324, 2471
MvnI	CGCG	2 cut(s)	19, 64
MwoI	GCNNNNNNNGC	3 cut(s)	1493, 1735, 2315
NaeI	GCCGGC	1 cut(s)	552
NciI	CCSGG	1 cut(s)	389
NgoMIV	GCCGGC	1 cut(s)	550
NlaIII	CATG	5 cut(s)	53, 340, 1177, 1647, 1821
NlaIV	GGNNCC	7 cut(s)	55, 271, 1074, 1407, 1541, 2447, 2622
NmeAIII	GCCGAG	1 cut(s)	2285
NmuCI	GTSAC	2 cut(s)	391, 1685
NspI	RCATGY	1 cut(s)	1821
NspV	TTCGAA	2 cut(s)	254, 1593
PaeR7I	CTCGAG	1 cut(s)	1233
PasI	CCCWGGG	1 cut(s)	2470
PciSI	GCTCTTC	1 cut(s)	692
PctI	GAATGC	4 cut(s)	662, 1369, 1498, 2318
PdiI	GCCGGC	1 cut(s)	552
PdmI	GAANNNNTTC	1 cut(s)	1182
PfoI	TCCNGGA	1 cut(s)	2322
PkrI	GCNGC	9 cut(s)	48, 66, 231, 234, 2046, 2317, 2492, 2555, 2635
Ple19I	CGATCG	1 cut(s)	608
PleI	GAGTC	3 cut(s)	112, 246, 2590
PpsI	GAGTC	3 cut(s)	112, 246, 2590
PshBI	ATTAAT	1 cut(s)	1986
Psp6I	CCWGG	6 cut(s)	628, 1196, 1297, 2047, 2322, 2469
PspEI	GGTNACC	1 cut(s)	391
PspGI	CCWGG	6 cut(s)	628, 1196, 1297, 2047, 2322, 2469
PspN4I	GGNNCC	7 cut(s)	55, 271, 1074, 1407, 1541, 2447, 2622
PspPI	GGNCC	6 cut(s)	53, 66, 804, 1301, 2467, 2639
PstI	CTGCAG	1 cut(s)	2635
PsuI	RGATCY	2 cut(s)	1874, 2434
PvuI	CGATCG	1 cut(s)	608
RsaI	GTAC	4 cut(s)	956, 1172, 1707, 2233
RsaNI	GTAC	4 cut(s)	955, 1171, 1706, 2232
RseI	CAYNNNNRTG	1 cut(s)	2585
SapI	GCTCTTC	1 cut(s)	692
SatI	GCNGC	9 cut(s)	47, 65, 230, 233, 2045, 2316, 2491, 2554, 2634
Sau96I	GGNCC	6 cut(s)	53, 66, 804, 1301, 2467, 2639
ScaI	AGTACT	1 cut(s)	1707
SchI	GAGTC	3 cut(s)	113, 247, 2590
ScrFI	CCNGG	7 cut(s)	389, 630, 1198, 1299, 2049, 2324, 2471
SduI	GDGCHC	4 cut(s)	212, 1849, 1898, 2197
SfaNI	GCATC	5 cut(s)	865, 1110, 1489, 1519, 2513
SfcI	CTRYAG	3 cut(s)	852, 1709, 2631
Sfr274I	CTCGAG	1 cut(s)	1233
SfuI	TTCGAA	2 cut(s)	254, 1593
SinI	GGWCC	3 cut(s)	804, 1301, 2639
SlaI	CTCGAG	1 cut(s)	1233
SmiI	ATTTAAAT	1 cut(s)	1968
SmiMI	CAYNNNNRTG	1 cut(s)	2585
SmlI	CTYRAG	4 cut(s)	1233, 1514, 1630, 1912
SmoI	CTYRAG	4 cut(s)	1233, 1514, 1630, 1912
SspI	AATATT	1 cut(s)	2604
SspMI	CTAG	3 cut(s)	1128, 1569, 2204
StyD4I	CCNGG	7 cut(s)	387, 628, 1196, 1297, 2047, 2322, 2469
SwaI	ATTTAAAT	1 cut(s)	1968
TaaI	ACNGT	5 cut(s)	7, 334, 1136, 1182, 1705
TaqI	TCGA	4 cut(s)	254, 309, 1234, 1593
TaqII	GACCGA	1 cut(s)	1758
TatI	WGTACW	4 cut(s)	954, 1170, 1705, 2231
TauI	GCSGC	5 cut(s)	49, 67, 232, 235, 2556
TscAI	CASTG	5 cut(s)	1688, 1816, 1898, 1953, 2305
TseFI	GTSAC	2 cut(s)	391, 1685
TseI	GCWGC	4 cut(s)	2044, 2315, 2490, 2633
Tsp45I	GTSAC	2 cut(s)	391, 1685
TspDTI	ATGAA	7 cut(s)	924, 1047, 1592, 1926, 2283, 2319, 2643
TspGWI	ACGGA	3 cut(s)	97, 233, 2162
TspRI	CASTG	5 cut(s)	1688, 1816, 1898, 1953, 2305
Vha464I	CTTAAG	1 cut(s)	1630
VneI	GTGCAC	2 cut(s)	1845, 2193
VpaK11BI	GGWCC	3 cut(s)	804, 1301, 2639
VspI	ATTAAT	1 cut(s)	1986
XagI	CCTNNNNNAGG	1 cut(s)	2634
XapI	RAATTY	5 cut(s)	1444, 1753, 2140, 2279, 2452
XbaI	TCTAGA	1 cut(s)	1568
XceI	RCATGY	1 cut(s)	1821
XhoI	CTCGAG	1 cut(s)	1233
XmnI	GAANNNNTTC	1 cut(s)	1182
XspI	CTAG	3 cut(s)	1128, 1569, 2204
ZrmI	AGTACT	1 cut(s)	1707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.