RLG00000017857

Receptor-like cytosolic serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
22377763 .. 22380431
2669 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017857

Sequence Viewer

Length: 1476 bp
ATGGCGGTGGAAGAGTCAGTGAGCGAAACGAAAGGAAACGAAGAGATAGGAAACGCAGAGATAGAAAACGCAGATGCAGAGATGGAATCCCAAGGTGATGACCTGAAGAAGGGAGAGTCGTGCGAGGGGGAGCCTTCACCGAGGGGTGTATTGGAAGCCCCCGGTACGGACTCGGACTGTAGCAGCAGCTGTGCATCGTCTTCTTGTTCTGATAGACCGCCGCTTGGTCATCAGCGCACTCTAATGCGTGACATCAGCAATGGATTGCAATGGACCAAGGGGAAGGAGATGTTTGATGCCTTGAAGAAGAAGTCAGCCAGGAGATTCTCCACAATTCCATTGCTGGGTACTAGCTATGAATTGTCCAGGAGGAACTTGAGGAGGAGATTGGCCAGGATTTGGAGCACCGACGATGGGGAGGAGGATGAAGAGGGAGTTGATTGCGAGGGATATCTGGCGATGAAACCGTCTTGGAGGAACTTTGATTATGCAGAGCTTGCTGTTGCTACTGGCAATTTCAAGCCTGAGAACTTAATTGGGAAAGGTGGGCAAGCAGAAGTTTACAAGGGAATCTTAAACAATGGTGAAGTTGTAGCTGTAAAGAGGCTAATGAAGAAAGAAAAAGAGACTGAAAACTTGGACAGAGTTGGTGATTTCTTAGCCGAGCTTGGGGTTATTGCTCACATTAGCCACCCGAATGCTGCTAAATTGCTCGGATTTGGCATCGACGGTGGTTTGCACCTAGTTCTCCAGTTTTCACCACATGGCAGCTTAGCTTCTCTACTGTTTGGTTCAGAAAAAGTTATGGAATGGAAAATAAGGTTTAAGGTAGCACTTGGGGTAGCAGAAGGGTTACAATATCTCCATCATGATTGCCACAGGCGCGTCATTCATAGAGACATCAAGGCCTCCAATATATTACTGTCTGAAGATTATGAGGCTCAGATATCTGATTTCGGACTAGCAAAGTGGCTCCCCGAAAAATGGACTCATCATGTTGTATTCCCTATTGAAGGCACATTCGGATATTTGTCTCCAGAGTACTTTATGCATGGAATCGTCGACGAGAAGACTGATGTATTTGCATATGGAGTTTTATTACTGGAGATCATAACAGGTCGTCGTGCAGTTGATAACACTCAACAAAGCCTTGTGATATGGGCAAAACCACTTCTGGATTCGGGCAATGTCAAGGAACTAGCAGATCCTCGATTAGAAGATAACTATGATCCTGTAGAGATGAAAAGAGCCATGTCGGCAGCTTCAATGTGCATTCGTCACCAATCCACCAAGCGTCCATACATGACTCGGGTAGTGAAAGTACTCGAGGGGGAGGATGGACCTGGAGAACAATTGAAACAAAAGTCTACACAAGTGAGATCACTCGTCTTGGATGCTTGTGACTTGGAAGATTATACTTGTTCTAACTATCTCAGCGACCTAACTCGCCATCGGCAACTAGTAATGGATCAATAG

Protein Analysis

492

Amino Acids

54.86

Weight (kDa)

5.35

Isoelectric Point (pI)

45.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 175 - 437 6.4e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 177 - 441 1.8e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 399
AccI GTMKAC 2 cut(s) 1062, 1367
AccII CGCG 1 cut(s) 885
AciI CCGC 3 cut(s) 5, 218, 221
AclWI GGATC 2 cut(s) 1199, 1223
AcoI YGGCCR 1 cut(s) 390
AcuI CTGAAG 2 cut(s) 125, 948
AfaI GTAC 4 cut(s) 166, 349, 1043, 1323
AfiI CCNNNNNNNGG 9 cut(s) 109, 166, 224, 344, 399, 414, 669, 984, 1013
AgsI TTSAA 5 cut(s) 304, 520, 1013, 1266, 1357
AhlI ACTAGT 1 cut(s) 1459
AjnI CCWGG 4 cut(s) 317, 365, 392, 1342
AluBI AGCT 8 cut(s) 189, 354, 496, 596, 667, 771, 776, 1262
AluI AGCT 8 cut(s) 189, 354, 496, 596, 667, 771, 776, 1262
Alw21I GWGCWC 1 cut(s) 407
Alw26I GTCTC 3 cut(s) 620, 891, 1038
AlwI GGATC 2 cut(s) 1199, 1223
AlwNI CAGNNNCTG 1 cut(s) 189
Ama87I CYCGRG 2 cut(s) 1308, 1325
AoxI GGCC 2 cut(s) 390, 906
ApeKI GCWGC 5 cut(s) 183, 186, 701, 768, 1259
AspLEI GCGC 2 cut(s) 237, 885
AspS9I GGNCC 2 cut(s) 273, 1340
AsuC2I CCSGG 1 cut(s) 162
AsuHPI GGTGA 6 cut(s) 107, 129, 596, 662, 750, 1271
AvaI CYCGRG 2 cut(s) 1308, 1325
AvaII GGWCC 2 cut(s) 273, 1340
BalI TGGCCA 1 cut(s) 392
BbsI GAAGAC 2 cut(s) 192, 1076
Bbv12I GWGCWC 1 cut(s) 407
BbvI GCAGC 5 cut(s) 195, 198, 688, 780, 1271
BccI CCATC 5 cut(s) 76, 407, 873, 1331, 1458
BciT130I CCWGG 4 cut(s) 319, 367, 394, 1344
BcnI CCSGG 1 cut(s) 162
BcoDI GTCTC 3 cut(s) 620, 891, 1038
BcuI ACTAGT 1 cut(s) 1459
BfaI CTAG 5 cut(s) 351, 743, 962, 1199, 1460
BfmI CTRYAG 2 cut(s) 178, 1233
BglI GCCNNNNNGGC 1 cut(s) 1256
BisI GCNGC 6 cut(s) 184, 187, 221, 702, 769, 1260
BlpI GCTNAGC 1 cut(s) 772
BlsI GCNGC 6 cut(s) 185, 188, 222, 703, 770, 1261
BmcAI AGTACT 2 cut(s) 1043, 1323
Bme1390I CCNGG 5 cut(s) 162, 319, 367, 394, 1344
Bme18I GGWCC 2 cut(s) 273, 1340
BmeT110I CYCGRG 2 cut(s) 1308, 1325
BmgT120I GGNCC 2 cut(s) 273, 1340
BmiI GGNNCC 2 cut(s) 132, 974
BmrFI CCNGG 5 cut(s) 162, 319, 367, 394, 1344
BmsI GCATC 5 cut(s) 64, 203, 286, 732, 1384
BpiI GAAGAC 2 cut(s) 192, 1076
BpmI CTGGAG 4 cut(s) 734, 1020, 1124, 1365
Bpu1102I GCTNAGC 1 cut(s) 772
BpuEI CTTGAG 1 cut(s) 397
BpuMI CCSGG 1 cut(s) 162
BsaJI CCNNGG 4 cut(s) 91, 140, 160, 276
BsaXI ACNNNNNCTCC 2 cut(s) 846, 876
Bsc4I CCNNNNNNNGG 9 cut(s) 109, 166, 224, 344, 399, 414, 669, 984, 1013
Bse1I ACTGG 3 cut(s) 514, 751, 1107
Bse3DI GCAATG 4 cut(s) 265, 275, 338, 1192
BseBI CCWGG 4 cut(s) 319, 367, 394, 1344
BseDI CCNNGG 4 cut(s) 91, 140, 160, 276
BseGI GGATG 3 cut(s) 430, 1342, 1399
BseLI CCNNNNNNNGG 9 cut(s) 109, 166, 224, 344, 399, 414, 669, 984, 1013
BseMI GCAATG 4 cut(s) 265, 275, 338, 1192
BseMII CTCAG 3 cut(s) 516, 956, 1447
BseNI ACTGG 3 cut(s) 514, 751, 1107
BseRI GAGGAG 3 cut(s) 394, 397, 434
BseXI GCAGC 5 cut(s) 195, 198, 688, 780, 1271
BseYI CCCAGC 1 cut(s) 343
BsgI GTGCAG 1 cut(s) 1146
Bsh1236I CGCG 1 cut(s) 885
BshFI GGCC 2 cut(s) 392, 908
BsiHKAI GWGCWC 1 cut(s) 407
BsiHKCI CYCGRG 2 cut(s) 1308, 1325
BsiSI CCGG 1 cut(s) 162
BslI CCNNNNNNNGG 9 cut(s) 109, 166, 224, 344, 399, 414, 669, 984, 1013
BsmAI GTCTC 3 cut(s) 620, 891, 1038
BsmI GAATGC 2 cut(s) 703, 1272
BsnI GGCC 2 cut(s) 392, 908
BsoBI CYCGRG 2 cut(s) 1308, 1325
Bsp1286I GDGCHC 1 cut(s) 407
Bsp143I GATC 5 cut(s) 1107, 1204, 1228, 1379, 1468
Bsp1720I GCTNAGC 1 cut(s) 772
BspACI CCGC 3 cut(s) 5, 218, 221
BspANI GGCC 2 cut(s) 392, 908
BspCNI CTCAG 3 cut(s) 517, 955, 1446
BspFNI CGCG 1 cut(s) 885
BspHI TCATGA 1 cut(s) 868
BspLI GGNNCC 2 cut(s) 132, 974
BspPI GGATC 2 cut(s) 1199, 1223
BsrDI GCAATG 4 cut(s) 265, 275, 338, 1192
BsrI ACTGG 3 cut(s) 514, 751, 1107
BssECI CCNNGG 4 cut(s) 91, 140, 160, 276
BssMI GATC 5 cut(s) 1107, 1204, 1228, 1379, 1468
BssT1I CCWWGG 2 cut(s) 91, 276
Bst2UI CCWGG 4 cut(s) 319, 367, 394, 1344
Bst4CI ACNGT 5 cut(s) 179, 468, 731, 786, 924
Bst6I CTCTTC 3 cut(s) 6, 36, 423
BstAPI GCANNNNNTGC 1 cut(s) 497
BstC8I GCNNGC 2 cut(s) 498, 552
BstDEI CTNAG 5 cut(s) 525, 658, 772, 942, 1433
BstENI CCTNNNNNAGG 2 cut(s) 107, 1011
BstF5I GGATG 3 cut(s) 430, 1342, 1399
BstFNI CGCG 1 cut(s) 885
BstHHI GCGC 2 cut(s) 237, 885
BstKTI GATC 5 cut(s) 1110, 1207, 1231, 1382, 1471
BstMAI GTCTC 3 cut(s) 620, 891, 1038
BstMBI GATC 5 cut(s) 1107, 1204, 1228, 1379, 1468
BstMWI GCNNNNNNNGC 3 cut(s) 497, 882, 1256
BstNI CCWGG 4 cut(s) 319, 367, 394, 1344
BstSCI CCNGG 5 cut(s) 160, 317, 365, 392, 1342
BstSFI CTRYAG 2 cut(s) 178, 1233
BstUI CGCG 1 cut(s) 885
BstV1I GCAGC 5 cut(s) 195, 198, 688, 780, 1271
BstV2I GAAGAC 2 cut(s) 192, 1076
BstX2I RGATCY 1 cut(s) 1204
BstYI RGATCY 1 cut(s) 1204
BsuRI GGCC 2 cut(s) 392, 908
BtgZI GCGATG 1 cut(s) 473
BtsCI GGATG 3 cut(s) 430, 1342, 1399
BtsIMutI CAGTG 1 cut(s) 24
Cac8I GCNNGC 2 cut(s) 498, 552
CaiI CAGNNNCTG 1 cut(s) 189
CciI TCATGA 1 cut(s) 868
CfoI GCGC 2 cut(s) 237, 885
Cfr13I GGNCC 2 cut(s) 273, 1340
CseI GACGC 2 cut(s) 874, 1283
Csp6I GTAC 4 cut(s) 165, 348, 1042, 1322
CviAII CATG 6 cut(s) 764, 869, 995, 1052, 1252, 1303
CviQI GTAC 4 cut(s) 165, 348, 1042, 1322
DdeI CTNAG 5 cut(s) 525, 658, 772, 942, 1433
DpnI GATC 5 cut(s) 1109, 1206, 1230, 1381, 1470
DpnII GATC 5 cut(s) 1107, 1204, 1228, 1379, 1468
EaeI YGGCCR 1 cut(s) 390
Eam1104I CTCTTC 3 cut(s) 6, 36, 423
EarI CTCTTC 3 cut(s) 6, 36, 423
Eco130I CCWWGG 2 cut(s) 91, 276
Eco147I AGGCCT 1 cut(s) 908
Eco32I GATATC 2 cut(s) 452, 948
Eco47I GGWCC 2 cut(s) 273, 1340
Eco57I CTGAAG 2 cut(s) 125, 948
Eco88I CYCGRG 2 cut(s) 1308, 1325
EcoNI CCTNNNNNAGG 2 cut(s) 107, 1011
EcoRII CCWGG 4 cut(s) 317, 365, 392, 1342
EcoRV GATATC 2 cut(s) 452, 948
EcoT14I CCWWGG 2 cut(s) 91, 276
EcoT22I ATGCAT 1 cut(s) 1053
ErhI CCWWGG 2 cut(s) 91, 276
FaeI CATG 6 cut(s) 767, 872, 998, 1055, 1255, 1306
FalI AAGNNNNNCTT 2 cut(s) 557, 589
FatI CATG 6 cut(s) 763, 868, 994, 1051, 1251, 1302
FauNDI CATATG 1 cut(s) 1087
FblI GTMKAC 2 cut(s) 1062, 1367
Fnu4HI GCNGC 6 cut(s) 184, 187, 221, 702, 769, 1260
FokI GGATG 3 cut(s) 437, 1349, 1406
Fsp4HI GCNGC 6 cut(s) 184, 187, 221, 702, 769, 1260
FspBI CTAG 5 cut(s) 351, 743, 962, 1199, 1460
GlaI GCGC 2 cut(s) 236, 884
GluI GCNGC 6 cut(s) 184, 187, 221, 702, 769, 1260
GsaI CCCAGC 1 cut(s) 347
GsuI CTGGAG 4 cut(s) 734, 1020, 1124, 1365
HaeIII GGCC 2 cut(s) 392, 908
HapII CCGG 1 cut(s) 162
HgaI GACGC 2 cut(s) 874, 1283
HhaI GCGC 2 cut(s) 237, 885
Hin1II CATG 6 cut(s) 767, 872, 998, 1055, 1255, 1306
Hin6I GCGC 2 cut(s) 235, 883
HinP1I GCGC 2 cut(s) 235, 883
HincII GTYRAC 1 cut(s) 1063
HindII GTYRAC 1 cut(s) 1063
HpaII CCGG 1 cut(s) 162
HphI GGTGA 6 cut(s) 107, 129, 596, 662, 750, 1271
Hpy166II GTNNAC 3 cut(s) 562, 1063, 1368
Hpy188I TCNGA 9 cut(s) 175, 211, 716, 796, 928, 945, 952, 959, 1025
Hpy188III TCNNGA 3 cut(s) 869, 1037, 1175
Hpy8I GTNNAC 3 cut(s) 562, 1063, 1368
Hpy99I CGWCG 5 cut(s) 413, 731, 1064, 1067, 1125
HpyAV CCTTC 5 cut(s) 103, 144, 277, 842, 1007
HpyCH4III ACNGT 5 cut(s) 179, 468, 731, 786, 924
HpyCH4V TGCA 9 cut(s) 77, 194, 268, 491, 739, 1051, 1085, 1127, 1272
HpyF10VI GCNNNNNNNGC 3 cut(s) 497, 882, 1256
HpyF3I CTNAG 5 cut(s) 525, 658, 772, 942, 1433
Hsp92II CATG 6 cut(s) 767, 872, 998, 1055, 1255, 1306
HspAI GCGC 2 cut(s) 235, 883
Kzo9I GATC 5 cut(s) 1107, 1204, 1228, 1379, 1468
LmnI GCTCC 3 cut(s) 130, 402, 978
Lsp1109I GCAGC 5 cut(s) 195, 198, 688, 780, 1271
LweI GCATC 5 cut(s) 64, 203, 286, 732, 1384
MaeI CTAG 5 cut(s) 351, 743, 962, 1199, 1460
MaeIII GTNAC 4 cut(s) 248, 852, 1277, 1400
MalI GATC 5 cut(s) 1109, 1206, 1230, 1381, 1470
MboI GATC 5 cut(s) 1107, 1204, 1228, 1379, 1468
MfeI CAATTG 1 cut(s) 1352
MflI RGATCY 1 cut(s) 1204
MhlI GDGCHC 1 cut(s) 407
MlsI TGGCCA 1 cut(s) 392
MluCI AATT 6 cut(s) 333, 359, 514, 534, 707, 1352
MluNI TGGCCA 1 cut(s) 392
MlyI GAGTC 5 cut(s) 23, 125, 164, 982, 1300
Mox20I TGGCCA 1 cut(s) 392
Mph1103I ATGCAT 1 cut(s) 1053
MscI TGGCCA 1 cut(s) 392
MseI TTAA 3 cut(s) 533, 575, 825
MslI CAYNNNNRTG 2 cut(s) 242, 696
Msp20I TGGCCA 1 cut(s) 392
MspA1I CMGCKG 1 cut(s) 189
MspI CCGG 1 cut(s) 162
MspR9I CCNGG 5 cut(s) 162, 319, 367, 394, 1344
MunI CAATTG 1 cut(s) 1352
Mva1269I GAATGC 2 cut(s) 703, 1272
MvaI CCWGG 4 cut(s) 319, 367, 394, 1344
MvnI CGCG 1 cut(s) 885
MwoI GCNNNNNNNGC 3 cut(s) 497, 882, 1256
NciI CCSGG 1 cut(s) 162
NdeI CATATG 1 cut(s) 1087
NdeII GATC 5 cut(s) 1107, 1204, 1228, 1379, 1468
NlaIII CATG 6 cut(s) 767, 872, 998, 1055, 1255, 1306
NlaIV GGNNCC 2 cut(s) 132, 974
NmeAIII GCCGAG 1 cut(s) 688
NmuCI GTSAC 3 cut(s) 248, 1277, 1400
NsiI ATGCAT 1 cut(s) 1053
PaeR7I CTCGAG 1 cut(s) 1325
PagI TCATGA 1 cut(s) 868
PceI AGGCCT 1 cut(s) 908
PctI GAATGC 2 cut(s) 703, 1272
PfeI GAWTC 5 cut(s) 86, 324, 570, 1056, 1178
PflMI CCANNNNNTGG 1 cut(s) 399
PfoI TCCNGGA 1 cut(s) 365
PkrI GCNGC 6 cut(s) 185, 188, 222, 703, 770, 1261
PleI GAGTC 5 cut(s) 22, 124, 164, 982, 1300
PpsI GAGTC 5 cut(s) 22, 124, 164, 982, 1300
Psp6I CCWGG 4 cut(s) 317, 365, 392, 1342
PspFI CCCAGC 1 cut(s) 343
PspGI CCWGG 4 cut(s) 317, 365, 392, 1342
PspN4I GGNNCC 2 cut(s) 132, 974
PspPI GGNCC 2 cut(s) 273, 1340
PspXI VCTCGAGB 1 cut(s) 1325
PstNI CAGNNNCTG 1 cut(s) 189
PsuI RGATCY 1 cut(s) 1204
PvuII CAGCTG 1 cut(s) 189
RsaI GTAC 4 cut(s) 166, 349, 1043, 1323
RsaNI GTAC 4 cut(s) 165, 348, 1042, 1322
RseI CAYNNNNRTG 2 cut(s) 242, 696
SalI GTCGAC 1 cut(s) 1061
SaqAI TTAA 3 cut(s) 533, 575, 825
SatI GCNGC 6 cut(s) 184, 187, 221, 702, 769, 1260
Sau3AI GATC 5 cut(s) 1107, 1204, 1228, 1379, 1468
Sau96I GGNCC 2 cut(s) 273, 1340
ScaI AGTACT 2 cut(s) 1043, 1323
SchI GAGTC 5 cut(s) 23, 125, 164, 982, 1300
ScrFI CCNGG 5 cut(s) 162, 319, 367, 394, 1344
SduI GDGCHC 1 cut(s) 407
SfaNI GCATC 5 cut(s) 64, 203, 286, 732, 1384
SfcI CTRYAG 2 cut(s) 178, 1233
Sfr274I CTCGAG 1 cut(s) 1325
SgrDI CGTCGACG 1 cut(s) 1061
SinI GGWCC 2 cut(s) 273, 1340
SlaI CTCGAG 1 cut(s) 1325
SmiMI CAYNNNNRTG 2 cut(s) 242, 696
SmlI CTYRAG 2 cut(s) 376, 1325
SmoI CTYRAG 2 cut(s) 376, 1325
SpeI ACTAGT 1 cut(s) 1459
Sse9I AATT 6 cut(s) 333, 359, 514, 534, 707, 1352
SseBI AGGCCT 1 cut(s) 908
SsiI CCGC 3 cut(s) 5, 218, 221
SspMI CTAG 5 cut(s) 351, 743, 962, 1199, 1460
StuI AGGCCT 1 cut(s) 908
StyD4I CCNGG 5 cut(s) 160, 317, 365, 392, 1342
StyI CCWWGG 2 cut(s) 91, 276
TaaI ACNGT 5 cut(s) 179, 468, 731, 786, 924
TaqI TCGA 4 cut(s) 726, 1062, 1210, 1326
TasI AATT 6 cut(s) 333, 359, 514, 534, 707, 1352
TatI WGTACW 2 cut(s) 1041, 1321
TauI GCSGC 1 cut(s) 223
TfiI GAWTC 5 cut(s) 86, 324, 570, 1056, 1178
Tru1I TTAA 3 cut(s) 533, 575, 825
Tru9I TTAA 3 cut(s) 533, 575, 825
TscAI CASTG 1 cut(s) 24
TseFI GTSAC 3 cut(s) 248, 1277, 1400
TseI GCWGC 5 cut(s) 183, 186, 701, 768, 1259
Tsp45I GTSAC 3 cut(s) 248, 1277, 1400
TspDTI ATGAA 6 cut(s) 372, 441, 476, 626, 881, 1256
TspGWI ACGGA 1 cut(s) 182
TspRI CASTG 1 cut(s) 24
Van91I CCANNNNNTGG 1 cut(s) 399
VpaK11BI GGWCC 2 cut(s) 273, 1340
XagI CCTNNNNNAGG 2 cut(s) 107, 1011
XhoI CTCGAG 1 cut(s) 1325
XmiI GTMKAC 2 cut(s) 1062, 1367
XspI CTAG 5 cut(s) 351, 743, 962, 1199, 1460
ZrmI AGTACT 2 cut(s) 1043, 1323
Zsp2I ATGCAT 1 cut(s) 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.