Rh2AG222500

Receptor-like cytosolic serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
23559628 .. 23563308
3681 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG222500.1

Sequence Viewer

Length: 1179 bp
ATGAACATTGTTATTGATTTTACAGAGTCAGTGAGCGAAACGAAAGGAAACGAAGAGATAGGAAACGCAGAGATAGAAAACGCAGATGCAGAGATGGAATCCCAAGGTGATGACCTGAAGAAGGGAGAGTCGTGCGAGGGGGAGCCTTCACCGAGGGGTGTACTGGAAGCCCCCGGGACGGACTCGGACTGTAGCAGCAGCTGTGCATCGTCTTCTTGTTCTGATAGACCACCGCTTGGTCATCAGCGCACGCTAATGCGTGACATCAGCAATGGATTGCAATGGACCAAGGGGAAGGAGATGTTTGATGCCTTGAAGAAGAAGTCAGCCAGGAGATTCTCCACAATTCCATTGCTGGGTACTAGCTATGAATTGTCCAGGAGGAACTTGAGGAGGAGATTGGCCAGGATTTGGAGCACCGATGATGGGGAGGAGGATGAAGAGGGAGTTGATTGCGAGGGATATCTGGCGATGAAACCGTCTTGGAGGAACTTTGATTATGCAGAGCTTGCTGTTGCTACTGGCAATTTCAAGCCTGAGAACTTAATTGGGAAAGGTGGGCAAGCAGAAGTGTACAAGGGAATCTTAAACAATGGTGAAGTTGTAGCTGTAAAGAGGCTAATGAAGAAAGAAAAAGAAACTGAAAACTTGGACAGAGTTGGTGATTTCTTAGCAGAGCTTGGGGTTATTGCTCACATTAGCCACCCGAATGCTGCTAAATTGCTCGGATTTGGCATCGATGGTGGTTTGCACCTAGTTCTCCAGTTTTCACCACATGGCAGCTTAGCTTCTCTACTATTTGGTTCAGAAAAAGTTATGGAATGGAAAATAAGGTTTAAGGTAGCACTTGGGGTAGCAGAAGGGTTACAATATCTCCATCATGATTGCCACAGGCGCGTCATTCATCGCGACATCAAGGCCTCCAATATATTACTGTCTGAAGATTATGAGGCTCAGATATCTGATTTCGGACTAGCAAAGTGGCTCCCCGAAAAATGGACTCATCATGTTGTATTCCCTATTGAAGGCACATTCGGATATTTGTCTCCAGAGTACTTTATGCATGGAATCGTCGACGAGAAGACTGATGTATTTGCATATGGAGTTTTATTACTGGAGATCATAACAGGTCGTCGTGCGGTTGATAACACTCAACAAAGCCTTGTGATATGGGTATGA

Protein Analysis

392

Amino Acids

43.65

Weight (kDa)

5.29

Isoelectric Point (pI)

43.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 179 - 385 1.9e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 181 - 387 1.9e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 236, 411
AccI GTMKAC 1 cut(s) 1074
AccII CGCG 2 cut(s) 897, 909
AciI CCGC 2 cut(s) 233, 1139
AcoI YGGCCR 1 cut(s) 402
AcuI CTGAAG 2 cut(s) 137, 960
AfaI GTAC 4 cut(s) 162, 361, 575, 1055
AfiI CCNNNNNNNGG 8 cut(s) 121, 178, 236, 356, 411, 426, 996, 1025
AgsI TTSAA 3 cut(s) 316, 532, 1025
AjnI CCWGG 3 cut(s) 329, 377, 404
AluBI AGCT 7 cut(s) 201, 366, 508, 608, 679, 783, 788
AluI AGCT 7 cut(s) 201, 366, 508, 608, 679, 783, 788
Alw21I GWGCWC 1 cut(s) 419
Alw26I GTCTC 1 cut(s) 1050
AlwNI CAGNNNCTG 1 cut(s) 201
Ama87I CYCGRG 1 cut(s) 173
AoxI GGCC 2 cut(s) 402, 918
ApeKI GCWGC 4 cut(s) 195, 198, 713, 780
AspLEI GCGC 2 cut(s) 249, 897
AspS9I GGNCC 1 cut(s) 285
AsuC2I CCSGG 2 cut(s) 174, 175
AsuHPI GGTGA 5 cut(s) 119, 141, 608, 674, 762
AvaI CYCGRG 1 cut(s) 173
AvaII GGWCC 1 cut(s) 285
BalI TGGCCA 1 cut(s) 404
BbsI GAAGAC 2 cut(s) 204, 1088
Bbv12I GWGCWC 1 cut(s) 419
BbvI GCAGC 4 cut(s) 207, 210, 700, 792
BccI CCATC 4 cut(s) 88, 419, 734, 885
BciT130I CCWGG 3 cut(s) 331, 379, 406
BcnI CCSGG 2 cut(s) 174, 175
BcoDI GTCTC 1 cut(s) 1050
BfaI CTAG 3 cut(s) 363, 755, 974
BfmI CTRYAG 1 cut(s) 190
BisI GCNGC 4 cut(s) 196, 199, 714, 781
BlpI GCTNAGC 1 cut(s) 784
BlsI GCNGC 4 cut(s) 197, 200, 715, 782
BmcAI AGTACT 1 cut(s) 1055
Bme1390I CCNGG 5 cut(s) 174, 175, 331, 379, 406
Bme18I GGWCC 1 cut(s) 285
BmeT110I CYCGRG 1 cut(s) 173
BmgT120I GGNCC 1 cut(s) 285
BmiI GGNNCC 2 cut(s) 144, 986
BmrFI CCNGG 5 cut(s) 174, 175, 331, 379, 406
BmsI GCATC 4 cut(s) 76, 215, 298, 744
BpiI GAAGAC 2 cut(s) 204, 1088
BpmI CTGGAG 3 cut(s) 746, 1032, 1136
Bpu1102I GCTNAGC 1 cut(s) 784
BpuEI CTTGAG 1 cut(s) 409
BpuMI CCSGG 2 cut(s) 174, 175
Bsa29I ATCGAT 1 cut(s) 738
BsaJI CCNNGG 5 cut(s) 103, 152, 172, 173, 288
BsaXI ACNNNNNCTCC 2 cut(s) 858, 888
Bsc4I CCNNNNNNNGG 8 cut(s) 121, 178, 236, 356, 411, 426, 996, 1025
Bse1I ACTGG 4 cut(s) 168, 526, 763, 1119
Bse3DI GCAATG 3 cut(s) 277, 287, 350
BseBI CCWGG 3 cut(s) 331, 379, 406
BseCI ATCGAT 1 cut(s) 738
BseDI CCNNGG 5 cut(s) 103, 152, 172, 173, 288
BseGI GGATG 1 cut(s) 442
BseLI CCNNNNNNNGG 8 cut(s) 121, 178, 236, 356, 411, 426, 996, 1025
BseMI GCAATG 3 cut(s) 277, 287, 350
BseMII CTCAG 2 cut(s) 528, 968
BseNI ACTGG 4 cut(s) 168, 526, 763, 1119
BseRI GAGGAG 3 cut(s) 406, 409, 446
BseXI GCAGC 4 cut(s) 207, 210, 700, 792
BseYI CCCAGC 1 cut(s) 355
Bsh1236I CGCG 2 cut(s) 897, 909
BshFI GGCC 2 cut(s) 404, 920
BshVI ATCGAT 1 cut(s) 738
BsiHKAI GWGCWC 1 cut(s) 419
BsiHKCI CYCGRG 1 cut(s) 173
BsiSI CCGG 1 cut(s) 174
BslFI GGGAC 1 cut(s) 190
BslI CCNNNNNNNGG 8 cut(s) 121, 178, 236, 356, 411, 426, 996, 1025
BsmAI GTCTC 1 cut(s) 1050
BsmFI GGGAC 1 cut(s) 190
BsmI GAATGC 1 cut(s) 715
BsnI GGCC 2 cut(s) 404, 920
BsoBI CYCGRG 1 cut(s) 173
Bsp1286I GDGCHC 1 cut(s) 419
Bsp1407I TGTACA 1 cut(s) 573
Bsp143I GATC 1 cut(s) 1119
Bsp1720I GCTNAGC 1 cut(s) 784
Bsp68I TCGCGA 1 cut(s) 909
BspACI CCGC 2 cut(s) 233, 1139
BspANI GGCC 2 cut(s) 404, 920
BspCNI CTCAG 2 cut(s) 529, 967
BspDI ATCGAT 1 cut(s) 738
BspFNI CGCG 2 cut(s) 897, 909
BspHI TCATGA 1 cut(s) 880
BspLI GGNNCC 2 cut(s) 144, 986
BsrDI GCAATG 3 cut(s) 277, 287, 350
BsrGI TGTACA 1 cut(s) 573
BsrI ACTGG 4 cut(s) 168, 526, 763, 1119
BssECI CCNNGG 5 cut(s) 103, 152, 172, 173, 288
BssMI GATC 1 cut(s) 1119
BssT1I CCWWGG 2 cut(s) 103, 288
Bst2UI CCWGG 3 cut(s) 331, 379, 406
Bst4CI ACNGT 3 cut(s) 191, 480, 936
Bst6I CTCTTC 2 cut(s) 48, 435
BstAPI GCANNNNNTGC 1 cut(s) 509
BstAUI TGTACA 1 cut(s) 573
BstC8I GCNNGC 3 cut(s) 251, 510, 564
BstDEI CTNAG 4 cut(s) 537, 670, 784, 954
BstENI CCTNNNNNAGG 2 cut(s) 119, 1023
BstF5I GGATG 1 cut(s) 442
BstFNI CGCG 2 cut(s) 897, 909
BstHHI GCGC 2 cut(s) 249, 897
BstKTI GATC 1 cut(s) 1122
BstMAI GTCTC 1 cut(s) 1050
BstMBI GATC 1 cut(s) 1119
BstMWI GCNNNNNNNGC 2 cut(s) 509, 894
BstNI CCWGG 3 cut(s) 331, 379, 406
BstSCI CCNGG 5 cut(s) 172, 173, 329, 377, 404
BstSFI CTRYAG 1 cut(s) 190
BstUI CGCG 2 cut(s) 897, 909
BstV1I GCAGC 4 cut(s) 207, 210, 700, 792
BstV2I GAAGAC 2 cut(s) 204, 1088
Bsu15I ATCGAT 1 cut(s) 738
BsuRI GGCC 2 cut(s) 404, 920
BsuTUI ATCGAT 1 cut(s) 738
BtgZI GCGATG 2 cut(s) 485, 890
BtsCI GGATG 1 cut(s) 442
BtsIMutI CAGTG 1 cut(s) 36
BtuMI TCGCGA 1 cut(s) 909
Cac8I GCNNGC 3 cut(s) 251, 510, 564
CaiI CAGNNNCTG 1 cut(s) 201
CciI TCATGA 1 cut(s) 880
CfoI GCGC 2 cut(s) 249, 897
Cfr13I GGNCC 1 cut(s) 285
Cfr9I CCCGGG 1 cut(s) 173
ClaI ATCGAT 1 cut(s) 738
CseI GACGC 1 cut(s) 886
Csp6I GTAC 4 cut(s) 161, 360, 574, 1054
CviAII CATG 4 cut(s) 776, 881, 1007, 1064
CviQI GTAC 4 cut(s) 161, 360, 574, 1054
DdeI CTNAG 4 cut(s) 537, 670, 784, 954
DpnI GATC 1 cut(s) 1121
DpnII GATC 1 cut(s) 1119
EaeI YGGCCR 1 cut(s) 402
Eam1104I CTCTTC 2 cut(s) 48, 435
EarI CTCTTC 2 cut(s) 48, 435
Eco130I CCWWGG 2 cut(s) 103, 288
Eco147I AGGCCT 1 cut(s) 920
Eco32I GATATC 2 cut(s) 464, 960
Eco47I GGWCC 1 cut(s) 285
Eco57I CTGAAG 2 cut(s) 137, 960
Eco88I CYCGRG 1 cut(s) 173
EcoNI CCTNNNNNAGG 2 cut(s) 119, 1023
EcoRII CCWGG 3 cut(s) 329, 377, 404
EcoRV GATATC 2 cut(s) 464, 960
EcoT14I CCWWGG 2 cut(s) 103, 288
EcoT22I ATGCAT 1 cut(s) 1065
ErhI CCWWGG 2 cut(s) 103, 288
FaeI CATG 4 cut(s) 779, 884, 1010, 1067
FalI AAGNNNNNCTT 2 cut(s) 569, 601
FaqI GGGAC 1 cut(s) 190
FatI CATG 4 cut(s) 775, 880, 1006, 1063
FauNDI CATATG 1 cut(s) 1099
FblI GTMKAC 1 cut(s) 1074
Fnu4HI GCNGC 4 cut(s) 196, 199, 714, 781
FokI GGATG 1 cut(s) 449
Fsp4HI GCNGC 4 cut(s) 196, 199, 714, 781
FspBI CTAG 3 cut(s) 363, 755, 974
GlaI GCGC 2 cut(s) 248, 896
GluI GCNGC 4 cut(s) 196, 199, 714, 781
GsaI CCCAGC 1 cut(s) 359
GsuI CTGGAG 3 cut(s) 746, 1032, 1136
HaeIII GGCC 2 cut(s) 404, 920
HapII CCGG 1 cut(s) 174
HgaI GACGC 1 cut(s) 886
HhaI GCGC 2 cut(s) 249, 897
Hin1II CATG 4 cut(s) 779, 884, 1010, 1067
Hin6I GCGC 2 cut(s) 247, 895
HinP1I GCGC 2 cut(s) 247, 895
HincII GTYRAC 1 cut(s) 1075
HindII GTYRAC 1 cut(s) 1075
HinfI GANTC 8 cut(s) 26, 98, 128, 182, 336, 582, 1000, 1068
HpaII CCGG 1 cut(s) 174
HphI GGTGA 5 cut(s) 119, 141, 608, 674, 762
Hpy166II GTNNAC 3 cut(s) 161, 574, 1075
Hpy188I TCNGA 9 cut(s) 187, 223, 728, 808, 940, 957, 964, 971, 1037
Hpy188III TCNNGA 3 cut(s) 881, 908, 1049
Hpy8I GTNNAC 3 cut(s) 161, 574, 1075
Hpy99I CGWCG 3 cut(s) 1076, 1079, 1137
HpyAV CCTTC 5 cut(s) 115, 156, 289, 854, 1019
HpyCH4III ACNGT 3 cut(s) 191, 480, 936
HpyCH4V TGCA 7 cut(s) 89, 206, 280, 503, 751, 1063, 1097
HpyF10VI GCNNNNNNNGC 2 cut(s) 509, 894
HpyF3I CTNAG 4 cut(s) 537, 670, 784, 954
Hsp92II CATG 4 cut(s) 779, 884, 1010, 1067
HspAI GCGC 2 cut(s) 247, 895
Kzo9I GATC 1 cut(s) 1119
LmnI GCTCC 3 cut(s) 142, 414, 990
Lsp1109I GCAGC 4 cut(s) 207, 210, 700, 792
LweI GCATC 4 cut(s) 76, 215, 298, 744
MaeI CTAG 3 cut(s) 363, 755, 974
MaeIII GTNAC 2 cut(s) 260, 864
MalI GATC 1 cut(s) 1121
MboI GATC 1 cut(s) 1119
MboII GAAGA 9 cut(s) 65, 130, 204, 328, 331, 452, 637, 953, 1093
MhlI GDGCHC 1 cut(s) 419
MlsI TGGCCA 1 cut(s) 404
MluCI AATT 5 cut(s) 345, 371, 526, 546, 719
MluNI TGGCCA 1 cut(s) 404
MlyI GAGTC 4 cut(s) 35, 137, 176, 994
Mox20I TGGCCA 1 cut(s) 404
Mph1103I ATGCAT 1 cut(s) 1065
MscI TGGCCA 1 cut(s) 404
MseI TTAA 3 cut(s) 545, 587, 837
MslI CAYNNNNRTG 2 cut(s) 254, 708
Msp20I TGGCCA 1 cut(s) 404
MspA1I CMGCKG 1 cut(s) 201
MspI CCGG 1 cut(s) 174
MspR9I CCNGG 5 cut(s) 174, 175, 331, 379, 406
Mva1269I GAATGC 1 cut(s) 715
MvaI CCWGG 3 cut(s) 331, 379, 406
MvnI CGCG 2 cut(s) 897, 909
MwoI GCNNNNNNNGC 2 cut(s) 509, 894
NciI CCSGG 2 cut(s) 174, 175
NdeI CATATG 1 cut(s) 1099
NdeII GATC 1 cut(s) 1119
NlaIII CATG 4 cut(s) 779, 884, 1010, 1067
NlaIV GGNNCC 2 cut(s) 144, 986
NmuCI GTSAC 1 cut(s) 260
NruI TCGCGA 1 cut(s) 909
NsiI ATGCAT 1 cut(s) 1065
PagI TCATGA 1 cut(s) 880
PceI AGGCCT 1 cut(s) 920
PctI GAATGC 1 cut(s) 715
PfeI GAWTC 4 cut(s) 98, 336, 582, 1068
PflMI CCANNNNNTGG 2 cut(s) 236, 411
PfoI TCCNGGA 1 cut(s) 377
PkrI GCNGC 4 cut(s) 197, 200, 715, 782
PleI GAGTC 4 cut(s) 34, 136, 176, 994
PpsI GAGTC 4 cut(s) 34, 136, 176, 994
Psp6I CCWGG 3 cut(s) 329, 377, 404
PspFI CCCAGC 1 cut(s) 355
PspGI CCWGG 3 cut(s) 329, 377, 404
PspN4I GGNNCC 2 cut(s) 144, 986
PspPI GGNCC 1 cut(s) 285
PstNI CAGNNNCTG 1 cut(s) 201
PvuII CAGCTG 1 cut(s) 201
RruI TCGCGA 1 cut(s) 909
RsaI GTAC 4 cut(s) 162, 361, 575, 1055
RsaNI GTAC 4 cut(s) 161, 360, 574, 1054
RseI CAYNNNNRTG 2 cut(s) 254, 708
SalI GTCGAC 1 cut(s) 1073
SaqAI TTAA 3 cut(s) 545, 587, 837
SatI GCNGC 4 cut(s) 196, 199, 714, 781
Sau3AI GATC 1 cut(s) 1119
Sau96I GGNCC 1 cut(s) 285
ScaI AGTACT 1 cut(s) 1055
SchI GAGTC 4 cut(s) 35, 137, 176, 994
ScrFI CCNGG 5 cut(s) 174, 175, 331, 379, 406
SduI GDGCHC 1 cut(s) 419
SfaNI GCATC 4 cut(s) 76, 215, 298, 744
SfcI CTRYAG 1 cut(s) 190
SgrDI CGTCGACG 1 cut(s) 1073
SinI GGWCC 1 cut(s) 285
SmaI CCCGGG 1 cut(s) 175
SmiMI CAYNNNNRTG 2 cut(s) 254, 708
SmlI CTYRAG 1 cut(s) 388
SmoI CTYRAG 1 cut(s) 388
Sse9I AATT 5 cut(s) 345, 371, 526, 546, 719
SseBI AGGCCT 1 cut(s) 920
SsiI CCGC 2 cut(s) 233, 1139
SspMI CTAG 3 cut(s) 363, 755, 974
StuI AGGCCT 1 cut(s) 920
StyD4I CCNGG 5 cut(s) 172, 173, 329, 377, 404
StyI CCWWGG 2 cut(s) 103, 288
TaaI ACNGT 3 cut(s) 191, 480, 936
TaqI TCGA 2 cut(s) 738, 1074
TasI AATT 5 cut(s) 345, 371, 526, 546, 719
TatI WGTACW 3 cut(s) 160, 573, 1053
TfiI GAWTC 4 cut(s) 98, 336, 582, 1068
Tru1I TTAA 3 cut(s) 545, 587, 837
Tru9I TTAA 3 cut(s) 545, 587, 837
TscAI CASTG 1 cut(s) 36
TseFI GTSAC 1 cut(s) 260
TseI GCWGC 4 cut(s) 195, 198, 713, 780
Tsp45I GTSAC 1 cut(s) 260
TspDTI ATGAA 6 cut(s) 17, 384, 453, 488, 638, 893
TspGWI ACGGA 1 cut(s) 194
TspMI CCCGGG 1 cut(s) 173
TspRI CASTG 1 cut(s) 36
Van91I CCANNNNNTGG 2 cut(s) 236, 411
VpaK11BI GGWCC 1 cut(s) 285
XagI CCTNNNNNAGG 2 cut(s) 119, 1023
XmaI CCCGGG 1 cut(s) 173
XmiI GTMKAC 1 cut(s) 1074
XspI CTAG 3 cut(s) 363, 755, 974
ZrmI AGTACT 1 cut(s) 1055
Zsp2I ATGCAT 1 cut(s) 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.