Rmu_sc0003994.1_g000009

Receptor-like cytosolic serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003994.1
Physical Location & Seq
Reverse (-)
59134 .. 61229
2096 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003994.1_g000009.1.cds

Sequence Viewer

Length: 1212 bp
atggcggtggaagagtcagtgagcgaaacgaaaggaaacgaagagataggaaacgcagagatagaaaacgcagatgcagagatggaatcccaaggtgatgacctgaagaagggagagtcgtgcgagggggagccttcaccgaggggtgtactggaagcccccgggacggactcggactgtagcagcagctgtgcatcgtcttcttgttctgatagaccaccgcttggtcatcagcgcacgctaatgcgtgacatcagcaatggattgcaatggaccaaggggaaggagatgtttgatgccttgaagaagaagtcagccaggagattctccacaattccattgctgggtactagctatgaattgtccaggaggaacttgaggaggagattggccaggatttggagcaccgatgatggggaggaggatgaagagggagttgattgcgagggatatctggcgatgaaaccgtcttggaggaactttgattatgcagagcttgctgttgctactggcaatttcaagcccggttcagaaaaatttatggaatggaaaataaggtttaaggtagcacttggggtagcagaagggttacaatatctccatcatgattgccacaggcgagtcattcatagagacatcaaggcctccaatatattactgtctgaagattatgaggctcagatatctgatttcggactagcaaagtggctccccgaaaaatggactcatcatgtagtattccctattgaaggcacattcggatatttgtctccagagtactttatgcatggaatcgtcgacgagaagactgatgtatttgcatatggagttttattactggagatcataacaggtcgtcgtgcagttgataacactcaacaaagccttgtgatatgggcaaaaccacttctggattcgggcaatgtcaaggaactagcagatcctcgattagaagatgactatgatccggtcgagatgaaaagagccatgtcagcagcttcaatgtgcattcgtcaccaatccaccaagcgtccatacatgactcgggtagtgaaagtactcgagggggaggatggacttggagaacaattgaaacaaaagtctacacaagtgagatcactcgtcttggatgcttgtgacttggaagattatacttgttctaactatctcagcgacctaactcgccatcggcaactagtaatggatcagtag

Protein Analysis

403

Amino Acids

45.53

Weight (kDa)

5.12

Isoelectric Point (pI)

50.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 224, 399
AccI GTMKAC 2 cut(s) 798, 1103
AciI CCGC 2 cut(s) 5, 221
AclWI GGATC 2 cut(s) 935, 959
AcoI YGGCCR 1 cut(s) 390
AcsI RAATTY 1 cut(s) 536
AcuI CTGAAG 2 cut(s) 125, 684
AfaI GTAC 4 cut(s) 150, 349, 779, 1059
AfiI CCNNNNNNNGG 8 cut(s) 109, 166, 224, 344, 399, 414, 720, 749
AgsI TTSAA 5 cut(s) 304, 520, 749, 1002, 1093
AhlI ACTAGT 1 cut(s) 1195
AjnI CCWGG 3 cut(s) 317, 365, 392
AluBI AGCT 4 cut(s) 189, 354, 496, 998
AluI AGCT 4 cut(s) 189, 354, 496, 998
Alw21I GWGCWC 1 cut(s) 407
Alw26I GTCTC 2 cut(s) 627, 774
AlwI GGATC 2 cut(s) 935, 959
AlwNI CAGNNNCTG 1 cut(s) 189
Ama87I CYCGRG 3 cut(s) 161, 1044, 1061
AoxI GGCC 2 cut(s) 390, 642
ApeKI GCWGC 3 cut(s) 183, 186, 995
ApoI RAATTY 1 cut(s) 536
AspLEI GCGC 1 cut(s) 237
AspS9I GGNCC 1 cut(s) 273
AsuC2I CCSGG 3 cut(s) 162, 163, 525
AsuHPI GGTGA 3 cut(s) 107, 129, 1007
AvaI CYCGRG 3 cut(s) 161, 1044, 1061
AvaII GGWCC 1 cut(s) 273
BalI TGGCCA 1 cut(s) 392
BbsI GAAGAC 2 cut(s) 192, 812
Bbv12I GWGCWC 1 cut(s) 407
BbvI GCAGC 3 cut(s) 195, 198, 1007
BccI CCATC 5 cut(s) 76, 407, 609, 1067, 1194
BciT130I CCWGG 3 cut(s) 319, 367, 394
BcnI CCSGG 3 cut(s) 162, 163, 525
BcoDI GTCTC 2 cut(s) 627, 774
BcuI ACTAGT 1 cut(s) 1195
BfaI CTAG 4 cut(s) 351, 698, 935, 1196
BfmI CTRYAG 1 cut(s) 178
BisI GCNGC 3 cut(s) 184, 187, 996
BlsI GCNGC 3 cut(s) 185, 188, 997
BmcAI AGTACT 2 cut(s) 779, 1059
Bme1390I CCNGG 6 cut(s) 162, 163, 319, 367, 394, 525
Bme18I GGWCC 1 cut(s) 273
BmeT110I CYCGRG 3 cut(s) 161, 1044, 1061
BmgT120I GGNCC 1 cut(s) 273
BmiI GGNNCC 2 cut(s) 132, 710
BmrFI CCNGG 6 cut(s) 162, 163, 319, 367, 394, 525
BmsI GCATC 4 cut(s) 64, 203, 286, 1120
BpiI GAAGAC 2 cut(s) 192, 812
BpmI CTGGAG 2 cut(s) 756, 860
BpuEI CTTGAG 1 cut(s) 397
BpuMI CCSGG 3 cut(s) 162, 163, 525
BsaJI CCNNGG 5 cut(s) 91, 140, 160, 161, 276
BsaWI WCCGGW 1 cut(s) 967
BsaXI ACNNNNNCTCC 2 cut(s) 582, 612
Bsc4I CCNNNNNNNGG 8 cut(s) 109, 166, 224, 344, 399, 414, 720, 749
Bse1I ACTGG 3 cut(s) 156, 514, 843
Bse3DI GCAATG 4 cut(s) 265, 275, 338, 928
BseBI CCWGG 3 cut(s) 319, 367, 394
BseDI CCNNGG 5 cut(s) 91, 140, 160, 161, 276
BseGI GGATG 3 cut(s) 430, 1078, 1135
BseLI CCNNNNNNNGG 8 cut(s) 109, 166, 224, 344, 399, 414, 720, 749
BseMI GCAATG 4 cut(s) 265, 275, 338, 928
BseMII CTCAG 2 cut(s) 692, 1183
BseNI ACTGG 3 cut(s) 156, 514, 843
BseRI GAGGAG 3 cut(s) 394, 397, 434
BseXI GCAGC 3 cut(s) 195, 198, 1007
BseYI CCCAGC 1 cut(s) 343
BsgI GTGCAG 1 cut(s) 882
Bsh1285I CGRYCG 1 cut(s) 972
BshFI GGCC 2 cut(s) 392, 644
BsiEI CGRYCG 1 cut(s) 972
BsiHKAI GWGCWC 1 cut(s) 407
BsiHKCI CYCGRG 3 cut(s) 161, 1044, 1061
BsiSI CCGG 3 cut(s) 162, 525, 968
BslFI GGGAC 1 cut(s) 178
BslI CCNNNNNNNGG 8 cut(s) 109, 166, 224, 344, 399, 414, 720, 749
BsmAI GTCTC 2 cut(s) 627, 774
BsmFI GGGAC 1 cut(s) 178
BsmI GAATGC 1 cut(s) 1008
BsnI GGCC 2 cut(s) 392, 644
BsoBI CYCGRG 3 cut(s) 161, 1044, 1061
Bsp1286I GDGCHC 1 cut(s) 407
Bsp143I GATC 5 cut(s) 843, 940, 964, 1115, 1204
BspACI CCGC 2 cut(s) 5, 221
BspANI GGCC 2 cut(s) 392, 644
BspCNI CTCAG 2 cut(s) 691, 1182
BspHI TCATGA 1 cut(s) 604
BspLI GGNNCC 2 cut(s) 132, 710
BspPI GGATC 2 cut(s) 935, 959
BsrDI GCAATG 4 cut(s) 265, 275, 338, 928
BsrI ACTGG 3 cut(s) 156, 514, 843
BssECI CCNNGG 5 cut(s) 91, 140, 160, 161, 276
BssMI GATC 5 cut(s) 843, 940, 964, 1115, 1204
BssT1I CCWWGG 2 cut(s) 91, 276
Bst2UI CCWGG 3 cut(s) 319, 367, 394
Bst4CI ACNGT 3 cut(s) 179, 468, 660
Bst6I CTCTTC 3 cut(s) 6, 36, 423
BstAPI GCANNNNNTGC 1 cut(s) 497
BstC8I GCNNGC 2 cut(s) 239, 498
BstDEI CTNAG 2 cut(s) 678, 1169
BstENI CCTNNNNNAGG 2 cut(s) 107, 747
BstF5I GGATG 3 cut(s) 430, 1078, 1135
BstHHI GCGC 1 cut(s) 237
BstKTI GATC 5 cut(s) 846, 943, 967, 1118, 1207
BstMAI GTCTC 2 cut(s) 627, 774
BstMBI GATC 5 cut(s) 843, 940, 964, 1115, 1204
BstMCI CGRYCG 1 cut(s) 972
BstMWI GCNNNNNNNGC 2 cut(s) 497, 992
BstNI CCWGG 3 cut(s) 319, 367, 394
BstSCI CCNGG 6 cut(s) 160, 161, 317, 365, 392, 523
BstSFI CTRYAG 1 cut(s) 178
BstV1I GCAGC 3 cut(s) 195, 198, 1007
BstV2I GAAGAC 2 cut(s) 192, 812
BstX2I RGATCY 1 cut(s) 940
BstYI RGATCY 1 cut(s) 940
BsuRI GGCC 2 cut(s) 392, 644
BtgZI GCGATG 1 cut(s) 473
BtsCI GGATG 3 cut(s) 430, 1078, 1135
BtsIMutI CAGTG 1 cut(s) 24
Cac8I GCNNGC 2 cut(s) 239, 498
CaiI CAGNNNCTG 1 cut(s) 189
CciI TCATGA 1 cut(s) 604
CfoI GCGC 1 cut(s) 237
Cfr13I GGNCC 1 cut(s) 273
Cfr9I CCCGGG 1 cut(s) 161
CseI GACGC 1 cut(s) 1019
Csp6I GTAC 4 cut(s) 149, 348, 778, 1058
CviAII CATG 5 cut(s) 605, 731, 788, 988, 1039
CviQI GTAC 4 cut(s) 149, 348, 778, 1058
DdeI CTNAG 2 cut(s) 678, 1169
DpnI GATC 5 cut(s) 845, 942, 966, 1117, 1206
DpnII GATC 5 cut(s) 843, 940, 964, 1115, 1204
EaeI YGGCCR 1 cut(s) 390
Eam1104I CTCTTC 3 cut(s) 6, 36, 423
EarI CTCTTC 3 cut(s) 6, 36, 423
Eco130I CCWWGG 2 cut(s) 91, 276
Eco147I AGGCCT 1 cut(s) 644
Eco32I GATATC 2 cut(s) 452, 684
Eco47I GGWCC 1 cut(s) 273
Eco57I CTGAAG 2 cut(s) 125, 684
Eco88I CYCGRG 3 cut(s) 161, 1044, 1061
EcoNI CCTNNNNNAGG 2 cut(s) 107, 747
EcoRII CCWGG 3 cut(s) 317, 365, 392
EcoRV GATATC 2 cut(s) 452, 684
EcoT14I CCWWGG 2 cut(s) 91, 276
EcoT22I ATGCAT 1 cut(s) 789
ErhI CCWWGG 2 cut(s) 91, 276
FaeI CATG 5 cut(s) 608, 734, 791, 991, 1042
FaqI GGGAC 1 cut(s) 178
FatI CATG 5 cut(s) 604, 730, 787, 987, 1038
FauNDI CATATG 1 cut(s) 823
FblI GTMKAC 2 cut(s) 798, 1103
Fnu4HI GCNGC 3 cut(s) 184, 187, 996
FokI GGATG 3 cut(s) 437, 1085, 1142
Fsp4HI GCNGC 3 cut(s) 184, 187, 996
FspBI CTAG 4 cut(s) 351, 698, 935, 1196
GlaI GCGC 1 cut(s) 236
GluI GCNGC 3 cut(s) 184, 187, 996
GsaI CCCAGC 1 cut(s) 347
GsuI CTGGAG 2 cut(s) 756, 860
HaeIII GGCC 2 cut(s) 392, 644
HapII CCGG 3 cut(s) 162, 525, 968
HgaI GACGC 1 cut(s) 1019
HhaI GCGC 1 cut(s) 237
Hin1II CATG 5 cut(s) 608, 734, 791, 991, 1042
Hin6I GCGC 1 cut(s) 235
HinP1I GCGC 1 cut(s) 235
HincII GTYRAC 1 cut(s) 799
HindII GTYRAC 1 cut(s) 799
HpaII CCGG 3 cut(s) 162, 525, 968
HphI GGTGA 3 cut(s) 107, 129, 1007
Hpy166II GTNNAC 3 cut(s) 149, 799, 1104
Hpy188I TCNGA 8 cut(s) 175, 211, 532, 664, 681, 688, 695, 761
Hpy188III TCNNGA 4 cut(s) 605, 773, 911, 973
Hpy8I GTNNAC 3 cut(s) 149, 799, 1104
Hpy99I CGWCG 3 cut(s) 800, 803, 861
HpyAV CCTTC 5 cut(s) 103, 144, 277, 578, 743
HpyCH4III ACNGT 3 cut(s) 179, 468, 660
HpyCH4V TGCA 8 cut(s) 77, 194, 268, 491, 787, 821, 863, 1008
HpyF10VI GCNNNNNNNGC 2 cut(s) 497, 992
HpyF3I CTNAG 2 cut(s) 678, 1169
Hsp92II CATG 5 cut(s) 608, 734, 791, 991, 1042
HspAI GCGC 1 cut(s) 235
Kzo9I GATC 5 cut(s) 843, 940, 964, 1115, 1204
LmnI GCTCC 3 cut(s) 130, 402, 714
Lsp1109I GCAGC 3 cut(s) 195, 198, 1007
LweI GCATC 4 cut(s) 64, 203, 286, 1120
MaeI CTAG 4 cut(s) 351, 698, 935, 1196
MaeIII GTNAC 4 cut(s) 248, 588, 1013, 1136
MalI GATC 5 cut(s) 845, 942, 966, 1117, 1206
MboI GATC 5 cut(s) 843, 940, 964, 1115, 1204
MfeI CAATTG 1 cut(s) 1088
MflI RGATCY 1 cut(s) 940
MhlI GDGCHC 1 cut(s) 407
MlsI TGGCCA 1 cut(s) 392
MluCI AATT 5 cut(s) 333, 359, 514, 536, 1088
MluNI TGGCCA 1 cut(s) 392
MlyI GAGTC 6 cut(s) 23, 125, 164, 630, 718, 1036
Mox20I TGGCCA 1 cut(s) 392
Mph1103I ATGCAT 1 cut(s) 789
MscI TGGCCA 1 cut(s) 392
MseI TTAA 1 cut(s) 561
MslI CAYNNNNRTG 1 cut(s) 242
Msp20I TGGCCA 1 cut(s) 392
MspA1I CMGCKG 1 cut(s) 189
MspI CCGG 3 cut(s) 162, 525, 968
MspR9I CCNGG 6 cut(s) 162, 163, 319, 367, 394, 525
MunI CAATTG 1 cut(s) 1088
Mva1269I GAATGC 1 cut(s) 1008
MvaI CCWGG 3 cut(s) 319, 367, 394
MwoI GCNNNNNNNGC 2 cut(s) 497, 992
NciI CCSGG 3 cut(s) 162, 163, 525
NdeI CATATG 1 cut(s) 823
NdeII GATC 5 cut(s) 843, 940, 964, 1115, 1204
NlaIII CATG 5 cut(s) 608, 734, 791, 991, 1042
NlaIV GGNNCC 2 cut(s) 132, 710
NmuCI GTSAC 3 cut(s) 248, 1013, 1136
NsiI ATGCAT 1 cut(s) 789
PaeR7I CTCGAG 1 cut(s) 1061
PagI TCATGA 1 cut(s) 604
PceI AGGCCT 1 cut(s) 644
PctI GAATGC 1 cut(s) 1008
PfeI GAWTC 4 cut(s) 86, 324, 792, 914
PflMI CCANNNNNTGG 2 cut(s) 224, 399
PfoI TCCNGGA 1 cut(s) 365
PkrI GCNGC 3 cut(s) 185, 188, 997
PleI GAGTC 6 cut(s) 22, 124, 164, 629, 718, 1036
PpsI GAGTC 6 cut(s) 22, 124, 164, 629, 718, 1036
Psp6I CCWGG 3 cut(s) 317, 365, 392
PspFI CCCAGC 1 cut(s) 343
PspGI CCWGG 3 cut(s) 317, 365, 392
PspN4I GGNNCC 2 cut(s) 132, 710
PspPI GGNCC 1 cut(s) 273
PspXI VCTCGAGB 1 cut(s) 1061
PstNI CAGNNNCTG 1 cut(s) 189
PsuI RGATCY 1 cut(s) 940
PvuII CAGCTG 1 cut(s) 189
RsaI GTAC 4 cut(s) 150, 349, 779, 1059
RsaNI GTAC 4 cut(s) 149, 348, 778, 1058
RseI CAYNNNNRTG 1 cut(s) 242
SalI GTCGAC 1 cut(s) 797
SaqAI TTAA 1 cut(s) 561
SatI GCNGC 3 cut(s) 184, 187, 996
Sau3AI GATC 5 cut(s) 843, 940, 964, 1115, 1204
Sau96I GGNCC 1 cut(s) 273
ScaI AGTACT 2 cut(s) 779, 1059
SchI GAGTC 6 cut(s) 23, 125, 164, 630, 718, 1036
ScrFI CCNGG 6 cut(s) 162, 163, 319, 367, 394, 525
SduI GDGCHC 1 cut(s) 407
SfaNI GCATC 4 cut(s) 64, 203, 286, 1120
SfcI CTRYAG 1 cut(s) 178
Sfr274I CTCGAG 1 cut(s) 1061
SgrDI CGTCGACG 1 cut(s) 797
SinI GGWCC 1 cut(s) 273
SlaI CTCGAG 1 cut(s) 1061
SmaI CCCGGG 1 cut(s) 163
SmiMI CAYNNNNRTG 1 cut(s) 242
SmlI CTYRAG 2 cut(s) 376, 1061
SmoI CTYRAG 2 cut(s) 376, 1061
SpeI ACTAGT 1 cut(s) 1195
Sse9I AATT 5 cut(s) 333, 359, 514, 536, 1088
SseBI AGGCCT 1 cut(s) 644
SsiI CCGC 2 cut(s) 5, 221
SspMI CTAG 4 cut(s) 351, 698, 935, 1196
StuI AGGCCT 1 cut(s) 644
StyD4I CCNGG 6 cut(s) 160, 161, 317, 365, 392, 523
StyI CCWWGG 2 cut(s) 91, 276
TaaI ACNGT 3 cut(s) 179, 468, 660
TaqI TCGA 4 cut(s) 798, 946, 972, 1062
TasI AATT 5 cut(s) 333, 359, 514, 536, 1088
TatI WGTACW 3 cut(s) 148, 777, 1057
TfiI GAWTC 4 cut(s) 86, 324, 792, 914
Tru1I TTAA 1 cut(s) 561
Tru9I TTAA 1 cut(s) 561
TscAI CASTG 1 cut(s) 24
TseFI GTSAC 3 cut(s) 248, 1013, 1136
TseI GCWGC 3 cut(s) 183, 186, 995
Tsp45I GTSAC 3 cut(s) 248, 1013, 1136
TspDTI ATGAA 5 cut(s) 372, 441, 476, 617, 992
TspGWI ACGGA 1 cut(s) 182
TspMI CCCGGG 1 cut(s) 161
TspRI CASTG 1 cut(s) 24
Van91I CCANNNNNTGG 2 cut(s) 224, 399
VpaK11BI GGWCC 1 cut(s) 273
XagI CCTNNNNNAGG 2 cut(s) 107, 747
XapI RAATTY 1 cut(s) 536
XhoI CTCGAG 1 cut(s) 1061
XmaI CCCGGG 1 cut(s) 161
XmiI GTMKAC 2 cut(s) 798, 1103
XspI CTAG 4 cut(s) 351, 698, 935, 1196
ZrmI AGTACT 2 cut(s) 779, 1059
Zsp2I ATGCAT 1 cut(s) 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.