No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g28390 FvH4_6g28400 FvH4_6g28400 |
| malus_domestica | MD09G1226700.v1.1 |
| prunus_persica | Prupe.3G102000_v2.0.a1 Prupe.3G102000_v2.0.a1 Prupe.3G102000_v2.0.a1 Prupe.3G102000_v2.0.a1 Prupe.3G102000_v2.0.a1 Prupe.3G102000_v2.0.a1 |
| pyrus_communis | pycom09g14570 pycom17g22910 pycom17g22920 |
| rosa_chinensis | RchiOBHm_Chr2g0132501 RchiOBHm_Chr2g0132511 |
| rosa_laevigata | RLG00000019261 RLG00000019263 |
| rosa_roxburghii | Rroxscaffold_2G00111860 Rroxscaffold_2G00111870 |
| rosa_rugosa | Rorug02G0304900 Rorug02G0304900 Rorug02G0305100 |
| rosa_samantha | Rh2AG357700 Rh2AG357900 Rh2BG364300 Rh2CG341400 Rh2DG381000 |
| rosa_wichuraiana | Rw2G029110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 330 |
| AclWI | GGATC | 1 cut(s) | 178 |
| AcuI | CTGAAG | 1 cut(s) | 340 |
| AfaI | GTAC | 1 cut(s) | 147 |
| AgsI | TTSAA | 1 cut(s) | 382 |
| AluBI | AGCT | 2 cut(s) | 48, 318 |
| AluI | AGCT | 2 cut(s) | 48, 318 |
| Alw26I | GTCTC | 2 cut(s) | 154, 329 |
| AlwI | GGATC | 1 cut(s) | 178 |
| AoxI | GGCC | 1 cut(s) | 110 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 135 |
| AspS9I | GGNCC | 1 cut(s) | 111 |
| AsuC2I | CCSGG | 1 cut(s) | 288 |
| AsuHPI | GGTGA | 2 cut(s) | 169, 319 |
| BccI | CCATC | 2 cut(s) | 93, 122 |
| BcnI | CCSGG | 1 cut(s) | 288 |
| BcoDI | GTCTC | 2 cut(s) | 154, 329 |
| BfaI | CTAG | 1 cut(s) | 391 |
| Bme1390I | CCNGG | 1 cut(s) | 288 |
| BmgT120I | GGNCC | 1 cut(s) | 111 |
| BmrFI | CCNGG | 1 cut(s) | 288 |
| BpuEI | CTTGAG | 1 cut(s) | 91 |
| BpuMI | CCSGG | 1 cut(s) | 288 |
| BsaBI | GATNNNNATC | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 1 cut(s) | 286 |
| Bse8I | GATNNNNATC | 1 cut(s) | 99 |
| BseDI | CCNNGG | 1 cut(s) | 286 |
| BseGI | GGATG | 1 cut(s) | 114 |
| BseJI | GATNNNNATC | 1 cut(s) | 99 |
| BseYI | CCCAGC | 1 cut(s) | 314 |
| BshFI | GGCC | 1 cut(s) | 112 |
| BsiSI | CCGG | 1 cut(s) | 288 |
| BslFI | GGGAC | 1 cut(s) | 249 |
| BsmAI | GTCTC | 2 cut(s) | 154, 329 |
| BsmFI | GGGAC | 1 cut(s) | 249 |
| BsnI | GGCC | 1 cut(s) | 112 |
| Bsp143I | GATC | 2 cut(s) | 36, 170 |
| BspACI | CCGC | 1 cut(s) | 330 |
| BspANI | GGCC | 1 cut(s) | 112 |
| BspPI | GGATC | 1 cut(s) | 178 |
| BssECI | CCNNGG | 1 cut(s) | 286 |
| BssMI | GATC | 2 cut(s) | 36, 170 |
| Bst4CI | ACNGT | 2 cut(s) | 65, 157 |
| Bst6I | CTCTTC | 1 cut(s) | 293 |
| BstF5I | GGATG | 1 cut(s) | 114 |
| BstKTI | GATC | 2 cut(s) | 39, 173 |
| BstMAI | GTCTC | 2 cut(s) | 154, 329 |
| BstMBI | GATC | 2 cut(s) | 36, 170 |
| BstSCI | CCNGG | 1 cut(s) | 286 |
| BsuRI | GGCC | 1 cut(s) | 112 |
| BtgZI | GCGATG | 1 cut(s) | 266 |
| BtsCI | GGATG | 1 cut(s) | 114 |
| Cfr13I | GGNCC | 1 cut(s) | 111 |
| Csp6I | GTAC | 1 cut(s) | 146 |
| CviAII | CATG | 3 cut(s) | 21, 140, 340 |
| CviJI | RGCY | 3 cut(s) | 48, 112, 318 |
| CviKI_1 | RGCY | 3 cut(s) | 48, 112, 318 |
| CviQI | GTAC | 1 cut(s) | 146 |
| DpnI | GATC | 2 cut(s) | 38, 172 |
| DpnII | GATC | 2 cut(s) | 36, 170 |
| Eam1104I | CTCTTC | 1 cut(s) | 293 |
| EarI | CTCTTC | 1 cut(s) | 293 |
| Eco57I | CTGAAG | 1 cut(s) | 340 |
| FaeI | CATG | 3 cut(s) | 24, 143, 343 |
| FaiI | YATR | 5 cut(s) | 22, 141, 186, 261, 341 |
| FaqI | GGGAC | 1 cut(s) | 249 |
| FatI | CATG | 3 cut(s) | 20, 139, 339 |
| FokI | GGATG | 1 cut(s) | 101 |
| FspBI | CTAG | 1 cut(s) | 391 |
| GsaI | CCCAGC | 1 cut(s) | 318 |
| HaeIII | GGCC | 1 cut(s) | 112 |
| HapII | CCGG | 1 cut(s) | 288 |
| Hin1II | CATG | 3 cut(s) | 24, 143, 343 |
| HindIII | AAGCTT | 1 cut(s) | 46 |
| HpaII | CCGG | 1 cut(s) | 288 |
| HphI | GGTGA | 2 cut(s) | 169, 319 |
| Hpy166II | GTNNAC | 1 cut(s) | 146 |
| Hpy188I | TCNGA | 1 cut(s) | 175 |
| Hpy8I | GTNNAC | 1 cut(s) | 146 |
| HpyAV | CCTTC | 1 cut(s) | 388 |
| HpyCH4III | ACNGT | 2 cut(s) | 65, 157 |
| HpyCH4IV | ACGT | 1 cut(s) | 91 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 269, 308 |
| HpySE526I | ACGT | 1 cut(s) | 91 |
| Hsp92II | CATG | 3 cut(s) | 24, 143, 343 |
| Kzo9I | GATC | 2 cut(s) | 36, 170 |
| LpnPI | CCDG | 3 cut(s) | 237, 301, 328 |
| MaeI | CTAG | 1 cut(s) | 391 |
| MaeII | ACGT | 1 cut(s) | 91 |
| MalI | GATC | 2 cut(s) | 38, 172 |
| MboI | GATC | 2 cut(s) | 36, 170 |
| MboII | GAAGA | 3 cut(s) | 224, 310, 346 |
| MluCI | AATT | 3 cut(s) | 11, 132, 383 |
| MnlI | CCTC | 2 cut(s) | 116, 185 |
| MroXI | GAANNNNTTC | 1 cut(s) | 135 |
| MseI | TTAA | 1 cut(s) | 99 |
| MslI | CAYNNNNRTG | 1 cut(s) | 90 |
| MspI | CCGG | 1 cut(s) | 288 |
| MspR9I | CCNGG | 1 cut(s) | 288 |
| NciI | CCSGG | 1 cut(s) | 288 |
| NdeII | GATC | 2 cut(s) | 36, 170 |
| NlaIII | CATG | 3 cut(s) | 24, 143, 343 |
| PdmI | GAANNNNTTC | 1 cut(s) | 135 |
| PspFI | CCCAGC | 1 cut(s) | 314 |
| PspPI | GGNCC | 1 cut(s) | 111 |
| RsaI | GTAC | 1 cut(s) | 147 |
| RsaNI | GTAC | 1 cut(s) | 146 |
| RseI | CAYNNNNRTG | 1 cut(s) | 90 |
| SaqAI | TTAA | 1 cut(s) | 99 |
| Sau3AI | GATC | 2 cut(s) | 36, 170 |
| Sau96I | GGNCC | 1 cut(s) | 111 |
| ScrFI | CCNGG | 1 cut(s) | 288 |
| SetI | ASST | 3 cut(s) | 50, 94, 320 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 90 |
| SmlI | CTYRAG | 1 cut(s) | 106 |
| SmoI | CTYRAG | 1 cut(s) | 106 |
| Sse9I | AATT | 3 cut(s) | 11, 132, 383 |
| SsiI | CCGC | 1 cut(s) | 330 |
| SspMI | CTAG | 1 cut(s) | 391 |
| StyD4I | CCNGG | 1 cut(s) | 286 |
| TaaI | ACNGT | 2 cut(s) | 65, 157 |
| TaiI | ACGT | 1 cut(s) | 94 |
| TasI | AATT | 3 cut(s) | 11, 132, 383 |
| TatI | WGTACW | 1 cut(s) | 145 |
| Tru1I | TTAA | 1 cut(s) | 99 |
| Tru9I | TTAA | 1 cut(s) | 99 |
| TspDTI | ATGAA | 3 cut(s) | 17, 128, 201 |
| XmnI | GAANNNNTTC | 1 cut(s) | 135 |
| XspI | CTAG | 1 cut(s) | 391 |