Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom04g15650 |
| rosa_chinensis | RchiOBHm_Chr2g0124801 RchiOBHm_Chr2g0133051 |
| rosa_laevigata | RLG00000007734 RLG00000013906 RLG00000018210 RLG00000019634 RLG00000030079 RLG00000036894 |
| rosa_multiflora | Rmu_sc0000409.1_g000001 Rmu_sc0001929.1_g000002 |
| rosa_rugosa | Rorug07G0325000 |
| rosa_samantha | Rh2CG331800 Rh6DG454600 Rh7AG293900 |
| rosa_wichuraiana | Rw1G007500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 331 |
| Acc36I | ACCTGC | 1 cut(s) | 331 |
| AcsI | RAATTY | 4 cut(s) | 338, 416, 537, 548 |
| AcuI | CTGAAG | 1 cut(s) | 305 |
| AfaI | GTAC | 2 cut(s) | 24, 381 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 208 |
| AgsI | TTSAA | 6 cut(s) | 17, 61, 206, 367, 416, 548 |
| AjnI | CCWGG | 1 cut(s) | 468 |
| AluBI | AGCT | 1 cut(s) | 399 |
| AluI | AGCT | 1 cut(s) | 399 |
| Alw26I | GTCTC | 1 cut(s) | 82 |
| ApoI | RAATTY | 4 cut(s) | 338, 416, 537, 548 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 362 |
| AsuHPI | GGTGA | 5 cut(s) | 85, 169, 224, 275, 312 |
| BanII | GRGCYC | 1 cut(s) | 251 |
| BccI | CCATC | 1 cut(s) | 113 |
| BciT130I | CCWGG | 1 cut(s) | 470 |
| BclI | TGATCA | 1 cut(s) | 454 |
| BcoDI | GTCTC | 1 cut(s) | 82 |
| BfaI | CTAG | 1 cut(s) | 396 |
| BfuAI | ACCTGC | 1 cut(s) | 331 |
| BmcAI | AGTACT | 1 cut(s) | 24 |
| Bme1390I | CCNGG | 1 cut(s) | 470 |
| BmrFI | CCNGG | 1 cut(s) | 470 |
| BmsI | GCATC | 2 cut(s) | 34, 267 |
| BpuEI | CTTGAG | 1 cut(s) | 235 |
| BsaI | GGTCTC | 1 cut(s) | 82 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 208 |
| Bse1I | ACTGG | 2 cut(s) | 319, 560 |
| BseBI | CCWGG | 1 cut(s) | 470 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 208 |
| BseMII | CTCAG | 1 cut(s) | 207 |
| BseNI | ACTGG | 2 cut(s) | 319, 560 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 208 |
| BsmAI | GTCTC | 1 cut(s) | 82 |
| Bso31I | GGTCTC | 1 cut(s) | 82 |
| Bsp1286I | GDGCHC | 1 cut(s) | 251 |
| Bsp143I | GATC | 2 cut(s) | 225, 454 |
| BspCNI | CTCAG | 1 cut(s) | 208 |
| BspHI | TCATGA | 1 cut(s) | 483 |
| BspMI | ACCTGC | 1 cut(s) | 331 |
| BspTNI | GGTCTC | 1 cut(s) | 82 |
| BsrI | ACTGG | 2 cut(s) | 319, 560 |
| BssMI | GATC | 2 cut(s) | 225, 454 |
| Bst2UI | CCWGG | 1 cut(s) | 470 |
| Bst4CI | ACNGT | 1 cut(s) | 96 |
| Bst6I | CTCTTC | 1 cut(s) | 348 |
| BstDEI | CTNAG | 2 cut(s) | 50, 216 |
| BstEII | GGTNACC | 1 cut(s) | 157 |
| BstKTI | GATC | 2 cut(s) | 228, 457 |
| BstMAI | GTCTC | 1 cut(s) | 82 |
| BstMBI | GATC | 2 cut(s) | 225, 454 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 286 |
| BstNI | CCWGG | 1 cut(s) | 470 |
| BstNSI | RCATGY | 2 cut(s) | 138, 293 |
| BstPI | GGTNACC | 1 cut(s) | 157 |
| BstSCI | CCNGG | 1 cut(s) | 468 |
| BtsI | GCAGTG | 1 cut(s) | 178 |
| BtsIMutI | CAGTG | 2 cut(s) | 178, 553 |
| BveI | ACCTGC | 1 cut(s) | 331 |
| CciI | TCATGA | 1 cut(s) | 483 |
| CsiI | ACCWGGT | 1 cut(s) | 468 |
| Csp6I | GTAC | 2 cut(s) | 23, 380 |
| CviAII | CATG | 4 cut(s) | 125, 135, 290, 484 |
| CviJI | RGCY | 4 cut(s) | 188, 249, 362, 399 |
| CviKI_1 | RGCY | 4 cut(s) | 188, 249, 362, 399 |
| CviQI | GTAC | 2 cut(s) | 23, 380 |
| DdeI | CTNAG | 2 cut(s) | 50, 216 |
| DpnI | GATC | 2 cut(s) | 227, 456 |
| DpnII | GATC | 2 cut(s) | 225, 454 |
| Eam1104I | CTCTTC | 1 cut(s) | 348 |
| EarI | CTCTTC | 1 cut(s) | 348 |
| Eco24I | GRGCYC | 1 cut(s) | 251 |
| Eco31I | GGTCTC | 1 cut(s) | 82 |
| Eco32I | GATATC | 2 cut(s) | 258, 510 |
| Eco57I | CTGAAG | 1 cut(s) | 305 |
| Eco91I | GGTNACC | 1 cut(s) | 157 |
| EcoO65I | GGTNACC | 1 cut(s) | 157 |
| EcoRI | GAATTC | 1 cut(s) | 548 |
| EcoRII | CCWGG | 1 cut(s) | 468 |
| EcoRV | GATATC | 2 cut(s) | 258, 510 |
| EcoT38I | GRGCYC | 1 cut(s) | 251 |
| FaeI | CATG | 4 cut(s) | 128, 138, 293, 487 |
| FaiI | YATR | 7 cut(s) | 126, 136, 291, 453, 485, 497, 573 |
| FatI | CATG | 4 cut(s) | 124, 134, 289, 483 |
| FbaI | TGATCA | 1 cut(s) | 454 |
| FriOI | GRGCYC | 1 cut(s) | 251 |
| FspBI | CTAG | 1 cut(s) | 396 |
| Hin1II | CATG | 4 cut(s) | 128, 138, 293, 487 |
| HinfI | GANTC | 1 cut(s) | 480 |
| HphI | GGTGA | 5 cut(s) | 85, 169, 224, 275, 312 |
| Hpy166II | GTNNAC | 1 cut(s) | 320 |
| Hpy188I | TCNGA | 2 cut(s) | 285, 310 |
| Hpy188III | TCNNGA | 4 cut(s) | 274, 458, 484, 505 |
| Hpy8I | GTNNAC | 1 cut(s) | 320 |
| HpyAV | CCTTC | 1 cut(s) | 373 |
| HpyCH4III | ACNGT | 1 cut(s) | 96 |
| HpyCH4V | TGCA | 1 cut(s) | 47 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 286 |
| HpyF3I | CTNAG | 2 cut(s) | 50, 216 |
| Hsp92II | CATG | 4 cut(s) | 128, 138, 293, 487 |
| Ksp22I | TGATCA | 1 cut(s) | 454 |
| Kzo9I | GATC | 2 cut(s) | 225, 454 |
| LpnPI | CCDG | 8 cut(s) | 140, 246, 287, 300, 336, 455, 482, 541 |
| LweI | GCATC | 2 cut(s) | 34, 267 |
| MabI | ACCWGGT | 1 cut(s) | 468 |
| MaeI | CTAG | 1 cut(s) | 396 |
| MaeIII | GTNAC | 2 cut(s) | 157, 292 |
| MalI | GATC | 2 cut(s) | 227, 456 |
| MboI | GATC | 2 cut(s) | 225, 454 |
| MboII | GAAGA | 2 cut(s) | 88, 365 |
| MhlI | GDGCHC | 1 cut(s) | 251 |
| MluCI | AATT | 5 cut(s) | 338, 367, 416, 537, 548 |
| MmeI | TCCRAC | 1 cut(s) | 454 |
| MnlI | CCTC | 4 cut(s) | 211, 238, 245, 531 |
| MroXI | GAANNNNTTC | 1 cut(s) | 362 |
| MseI | TTAA | 1 cut(s) | 27 |
| MslI | CAYNNNNRTG | 1 cut(s) | 558 |
| MspR9I | CCNGG | 1 cut(s) | 470 |
| MvaI | CCWGG | 1 cut(s) | 470 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 286 |
| NdeII | GATC | 2 cut(s) | 225, 454 |
| NlaIII | CATG | 4 cut(s) | 128, 138, 293, 487 |
| NmuCI | GTSAC | 2 cut(s) | 157, 292 |
| NspI | RCATGY | 2 cut(s) | 138, 293 |
| PagI | TCATGA | 1 cut(s) | 483 |
| PaqCI | CACCTGC | 1 cut(s) | 331 |
| PdmI | GAANNNNTTC | 1 cut(s) | 362 |
| PfeI | GAWTC | 1 cut(s) | 480 |
| Psp6I | CCWGG | 1 cut(s) | 468 |
| PspEI | GGTNACC | 1 cut(s) | 157 |
| PspGI | CCWGG | 1 cut(s) | 468 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 94, 126 |
| RsaI | GTAC | 2 cut(s) | 24, 381 |
| RsaNI | GTAC | 2 cut(s) | 23, 380 |
| RseI | CAYNNNNRTG | 1 cut(s) | 558 |
| SaqAI | TTAA | 1 cut(s) | 27 |
| Sau3AI | GATC | 2 cut(s) | 225, 454 |
| ScaI | AGTACT | 1 cut(s) | 24 |
| ScrFI | CCNGG | 1 cut(s) | 470 |
| SduI | GDGCHC | 1 cut(s) | 251 |
| SetI | ASST | 8 cut(s) | 204, 237, 265, 325, 381, 401, 471, 518 |
| SexAI | ACCWGGT | 1 cut(s) | 468 |
| SfaNI | GCATC | 2 cut(s) | 34, 267 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 558 |
| SmlI | CTYRAG | 1 cut(s) | 250 |
| SmoI | CTYRAG | 1 cut(s) | 250 |
| Sse9I | AATT | 5 cut(s) | 338, 367, 416, 537, 548 |
| SspMI | CTAG | 1 cut(s) | 396 |
| StyD4I | CCNGG | 1 cut(s) | 468 |
| TaaI | ACNGT | 1 cut(s) | 96 |
| TasI | AATT | 5 cut(s) | 338, 367, 416, 537, 548 |
| TatI | WGTACW | 1 cut(s) | 22 |
| TfiI | GAWTC | 1 cut(s) | 480 |
| Tru1I | TTAA | 1 cut(s) | 27 |
| Tru9I | TTAA | 1 cut(s) | 27 |
| TscAI | CASTG | 2 cut(s) | 178, 560 |
| TseFI | GTSAC | 2 cut(s) | 157, 292 |
| Tsp45I | GTSAC | 2 cut(s) | 157, 292 |
| TspDTI | ATGAA | 7 cut(s) | 17, 102, 345, 472, 500, 512, 531 |
| TspRI | CASTG | 2 cut(s) | 178, 560 |
| XapI | RAATTY | 4 cut(s) | 338, 416, 537, 548 |
| XceI | RCATGY | 2 cut(s) | 138, 293 |
| XmnI | GAANNNNTTC | 1 cut(s) | 362 |
| XspI | CTAG | 1 cut(s) | 396 |
| ZrmI | AGTACT | 1 cut(s) | 24 |