Rh7AG293900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
32025297 .. 32056145
30849 bp
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UTR
Exon/CDS
Intron
Rh7AG293900.1

Sequence Viewer

Length: 201 bp
ATGGGAAGTCGGGTCGGACCTCGTCATCCACGCTCAGATGACCTCGGAGCTCTGGTGATGGTGCTGCAAAATTTATGTTTTTATGATTGGACTAAAATGCCCTCAATTTTAACACTGTTTCCTCTTGTTTATTGTGGAATTCCATTTGAATTCCACCGAAATGTGTTTTATTATGTGAAGGGATTGGAGATTCATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

7.74

Weight (kDa)

7.84

Isoelectric Point (pI)

58.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 3 cut(s) 70, 138, 149
AgsI TTSAA 1 cut(s) 149
AluBI AGCT 1 cut(s) 50
AluI AGCT 1 cut(s) 50
Alw21I GWGCWC 1 cut(s) 52
ApeKI GCWGC 1 cut(s) 64
ApoI RAATTY 3 cut(s) 70, 138, 149
AspS9I GGNCC 1 cut(s) 17
AsuHPI GGTGA 1 cut(s) 67
AvaII GGWCC 1 cut(s) 17
BanII GRGCYC 1 cut(s) 52
Bbv12I GWGCWC 1 cut(s) 52
BbvI GCAGC 1 cut(s) 51
BccI CCATC 1 cut(s) 52
BisI GCNGC 1 cut(s) 65
BlsI GCNGC 1 cut(s) 66
Bme18I GGWCC 1 cut(s) 17
BmgT120I GGNCC 1 cut(s) 17
BsaJI CCNNGG 1 cut(s) 43
BsaXI ACNNNNNCTCC 2 cut(s) 39, 69
BseDI CCNNGG 1 cut(s) 43
BseGI GGATG 1 cut(s) 25
BseMII CTCAG 1 cut(s) 48
BseXI GCAGC 1 cut(s) 51
BsiHKAI GWGCWC 1 cut(s) 52
Bsp1286I GDGCHC 1 cut(s) 52
BspCNI CTCAG 1 cut(s) 47
BssECI CCNNGG 1 cut(s) 43
Bst4CI ACNGT 1 cut(s) 117
BstDEI CTNAG 1 cut(s) 34
BstF5I GGATG 1 cut(s) 25
BstV1I GCAGC 1 cut(s) 51
BtsCI GGATG 1 cut(s) 25
BtsIMutI CAGTG 1 cut(s) 113
Cfr13I GGNCC 1 cut(s) 17
CviJI RGCY 1 cut(s) 50
CviKI_1 RGCY 1 cut(s) 50
DdeI CTNAG 1 cut(s) 34
Ecl136II GAGCTC 1 cut(s) 50
Eco24I GRGCYC 1 cut(s) 52
Eco47I GGWCC 1 cut(s) 17
Eco53kI GAGCTC 1 cut(s) 50
EcoICRI GAGCTC 1 cut(s) 50
EcoRI GAATTC 2 cut(s) 138, 149
EcoT38I GRGCYC 1 cut(s) 52
FaiI YATR 3 cut(s) 76, 84, 174
Fnu4HI GCNGC 1 cut(s) 65
FokI GGATG 1 cut(s) 12
FriOI GRGCYC 1 cut(s) 52
Fsp4HI GCNGC 1 cut(s) 65
GluI GCNGC 1 cut(s) 65
HinfI GANTC 1 cut(s) 190
HphI GGTGA 1 cut(s) 67
Hpy188I TCNGA 3 cut(s) 17, 37, 47
HpyAV CCTTC 1 cut(s) 172
HpyCH4III ACNGT 1 cut(s) 117
HpyCH4V TGCA 1 cut(s) 67
HpyF3I CTNAG 1 cut(s) 34
LmnI GCTCC 1 cut(s) 47
LpnPI CCDG 1 cut(s) 38
Lsp1109I GCAGC 1 cut(s) 51
MhlI GDGCHC 1 cut(s) 52
MluCI AATT 4 cut(s) 70, 105, 138, 149
MnlI CCTC 4 cut(s) 30, 53, 112, 132
MseI TTAA 1 cut(s) 110
MslI CAYNNNNRTG 1 cut(s) 159
PfeI GAWTC 1 cut(s) 190
PflFI GACNNNGTC 1 cut(s) 21
PkrI GCNGC 1 cut(s) 66
Psp124BI GAGCTC 1 cut(s) 52
PspPI GGNCC 1 cut(s) 17
PsyI GACNNNGTC 1 cut(s) 21
RseI CAYNNNNRTG 1 cut(s) 159
SacI GAGCTC 1 cut(s) 52
SaqAI TTAA 1 cut(s) 110
SatI GCNGC 1 cut(s) 65
Sau96I GGNCC 1 cut(s) 17
SduI GDGCHC 1 cut(s) 52
SetI ASST 3 cut(s) 22, 45, 52
SgeI CNNG 6 cut(s) 23, 33, 42, 56, 65, 137
SinI GGWCC 1 cut(s) 17
SmiMI CAYNNNNRTG 1 cut(s) 159
Sse9I AATT 4 cut(s) 70, 105, 138, 149
SstI GAGCTC 1 cut(s) 52
TaaI ACNGT 1 cut(s) 117
TasI AATT 4 cut(s) 70, 105, 138, 149
TfiI GAWTC 1 cut(s) 190
Tru1I TTAA 1 cut(s) 110
Tru9I TTAA 1 cut(s) 110
TscAI CASTG 1 cut(s) 120
TseI GCWGC 1 cut(s) 64
TspDTI ATGAA 1 cut(s) 182
TspRI CASTG 1 cut(s) 120
Tth111I GACNNNGTC 1 cut(s) 21
VpaK11BI GGWCC 1 cut(s) 17
XapI RAATTY 3 cut(s) 70, 138, 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.