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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G52343 |
| fragaria_vesca | FvH4_6g31220 FvH4_6g31220 |
| malus_domestica | MD17G1194800.v1.1 |
| prunus_persica | Prupe.3G070800_v2.0.a1 |
| pyrus_communis | pycom17g20060 |
| rosa_chinensis | RchiOBHm_Chr2g0137891 |
| rosa_laevigata | RLG00000019688 |
| rosa_multiflora | Rmu_sc0002170.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00106670 |
| rosa_rugosa | Rorug02G0348000 |
| rosa_samantha | Rh2AG394400 Rh2BG401600 Rh2CG381100 Rh2DG416400 |
| rosa_wichuraiana | Rw2G032260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 544 |
| AccI | GTMKAC | 2 cut(s) | 5, 996 |
| AciI | CCGC | 3 cut(s) | 320, 983, 1220 |
| AclWI | GGATC | 4 cut(s) | 82, 87, 100, 366 |
| AcsI | RAATTY | 2 cut(s) | 246, 872 |
| AcuI | CTGAAG | 1 cut(s) | 592 |
| AfaI | GTAC | 2 cut(s) | 184, 605 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 97, 726, 1081 |
| AgeI | ACCGGT | 1 cut(s) | 8 |
| AgsI | TTSAA | 4 cut(s) | 193, 252, 269, 1166 |
| AluBI | AGCT | 6 cut(s) | 236, 467, 688, 1025, 1276, 1313 |
| AluI | AGCT | 6 cut(s) | 236, 467, 688, 1025, 1276, 1313 |
| AlwI | GGATC | 4 cut(s) | 82, 87, 100, 366 |
| Ama87I | CYCGRG | 1 cut(s) | 544 |
| AoxI | GGCC | 3 cut(s) | 87, 540, 548 |
| ApeKI | GCWGC | 1 cut(s) | 812 |
| ApoI | RAATTY | 2 cut(s) | 246, 872 |
| AsiGI | ACCGGT | 1 cut(s) | 8 |
| AspS9I | GGNCC | 2 cut(s) | 88, 384 |
| AsuC2I | CCSGG | 1 cut(s) | 940 |
| AsuII | TTCGAA | 2 cut(s) | 338, 401 |
| AsuNHI | GCTAGC | 1 cut(s) | 236 |
| AvaI | CYCGRG | 1 cut(s) | 544 |
| AvaII | GGWCC | 1 cut(s) | 384 |
| BbvI | GCAGC | 1 cut(s) | 799 |
| BccI | CCATC | 6 cut(s) | 16, 287, 583, 790, 886, 1228 |
| BclI | TGATCA | 2 cut(s) | 1174, 1270 |
| BcnI | CCSGG | 1 cut(s) | 940 |
| BfaI | CTAG | 2 cut(s) | 237, 1065 |
| BfmI | CTRYAG | 1 cut(s) | 993 |
| BisI | GCNGC | 1 cut(s) | 813 |
| BlsI | GCNGC | 1 cut(s) | 814 |
| Bme1390I | CCNGG | 1 cut(s) | 940 |
| Bme18I | GGWCC | 1 cut(s) | 384 |
| BmeT110I | CYCGRG | 1 cut(s) | 544 |
| BmgT120I | GGNCC | 2 cut(s) | 88, 384 |
| BmrFI | CCNGG | 1 cut(s) | 940 |
| BmtI | GCTAGC | 1 cut(s) | 240 |
| BpmI | CTGGAG | 2 cut(s) | 696, 1284 |
| Bpu10I | CCTNAGC | 1 cut(s) | 801 |
| Bpu14I | TTCGAA | 2 cut(s) | 338, 401 |
| BpuMI | CCSGG | 1 cut(s) | 940 |
| BsaBI | GATNNNNATC | 1 cut(s) | 896 |
| BsaWI | WCCGGW | 1 cut(s) | 8 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 97, 726, 1081 |
| Bse118I | RCCGGY | 1 cut(s) | 8 |
| Bse3DI | GCAATG | 1 cut(s) | 218 |
| Bse8I | GATNNNNATC | 1 cut(s) | 896 |
| BseGI | GGATG | 4 cut(s) | 202, 298, 958, 1075 |
| BseJI | GATNNNNATC | 1 cut(s) | 896 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 97, 726, 1081 |
| BseMI | GCAATG | 1 cut(s) | 218 |
| BseMII | CTCAG | 5 cut(s) | 380, 540, 961, 1001, 1080 |
| BseXI | GCAGC | 1 cut(s) | 799 |
| Bsh1285I | CGRYCG | 1 cut(s) | 9 |
| BshFI | GGCC | 3 cut(s) | 89, 542, 550 |
| BshTI | ACCGGT | 1 cut(s) | 8 |
| BsiEI | CGRYCG | 1 cut(s) | 9 |
| BsiHKCI | CYCGRG | 1 cut(s) | 544 |
| BsiSI | CCGG | 2 cut(s) | 9, 940 |
| BslFI | GGGAC | 2 cut(s) | 675, 940 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 97, 726, 1081 |
| BsmFI | GGGAC | 2 cut(s) | 675, 940 |
| BsnI | GGCC | 3 cut(s) | 89, 542, 550 |
| BsoBI | CYCGRG | 1 cut(s) | 544 |
| Bsp119I | TTCGAA | 2 cut(s) | 338, 401 |
| Bsp143I | GATC | 6 cut(s) | 74, 79, 105, 358, 1174, 1270 |
| BspACI | CCGC | 3 cut(s) | 320, 983, 1220 |
| BspANI | GGCC | 3 cut(s) | 89, 542, 550 |
| BspCNI | CTCAG | 5 cut(s) | 379, 539, 960, 1002, 1081 |
| BspOI | GCTAGC | 1 cut(s) | 240 |
| BspPI | GGATC | 4 cut(s) | 82, 87, 100, 366 |
| BspT104I | TTCGAA | 2 cut(s) | 338, 401 |
| BsrDI | GCAATG | 1 cut(s) | 218 |
| BsrFI | RCCGGY | 1 cut(s) | 8 |
| BssAI | RCCGGY | 1 cut(s) | 8 |
| BssMI | GATC | 6 cut(s) | 74, 79, 105, 358, 1174, 1270 |
| Bst4CI | ACNGT | 5 cut(s) | 206, 583, 668, 994, 1210 |
| Bst6I | CTCTTC | 1 cut(s) | 853 |
| BstBI | TTCGAA | 2 cut(s) | 338, 401 |
| BstC8I | GCNNGC | 3 cut(s) | 238, 374, 1278 |
| BstDEI | CTNAG | 9 cut(s) | 273, 366, 526, 801, 947, 1010, 1089, 1183, 1353 |
| BstEII | GGTNACC | 1 cut(s) | 934 |
| BstF5I | GGATG | 4 cut(s) | 202, 298, 958, 1075 |
| BstKTI | GATC | 6 cut(s) | 77, 82, 108, 361, 1177, 1273 |
| BstMBI | GATC | 6 cut(s) | 74, 79, 105, 358, 1174, 1270 |
| BstMCI | CGRYCG | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1031 |
| BstPI | GGTNACC | 1 cut(s) | 934 |
| BstSCI | CCNGG | 1 cut(s) | 938 |
| BstSFI | CTRYAG | 1 cut(s) | 993 |
| BstV1I | GCAGC | 1 cut(s) | 799 |
| BstX2I | RGATCY | 1 cut(s) | 105 |
| BstYI | RGATCY | 1 cut(s) | 105 |
| BsuRI | GGCC | 3 cut(s) | 89, 542, 550 |
| BtsCI | GGATG | 4 cut(s) | 202, 298, 958, 1075 |
| BtsI | GCAGTG | 1 cut(s) | 840 |
| BtsIMutI | CAGTG | 3 cut(s) | 831, 840, 990 |
| Cac8I | GCNNGC | 3 cut(s) | 238, 374, 1278 |
| Cfr10I | RCCGGY | 1 cut(s) | 8 |
| Cfr13I | GGNCC | 2 cut(s) | 88, 384 |
| CseI | GACGC | 1 cut(s) | 838 |
| Csp6I | GTAC | 2 cut(s) | 183, 604 |
| CspAI | ACCGGT | 1 cut(s) | 8 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 994, 1029 |
| CviAII | CATG | 6 cut(s) | 85, 439, 517, 769, 1076, 1157 |
| CviQI | GTAC | 2 cut(s) | 183, 604 |
| DdeI | CTNAG | 9 cut(s) | 273, 366, 526, 801, 947, 1010, 1089, 1183, 1353 |
| DpnI | GATC | 6 cut(s) | 76, 81, 107, 360, 1176, 1272 |
| DpnII | GATC | 6 cut(s) | 74, 79, 105, 358, 1174, 1270 |
| Eam1104I | CTCTTC | 1 cut(s) | 853 |
| EarI | CTCTTC | 1 cut(s) | 853 |
| Eco147I | AGGCCT | 1 cut(s) | 550 |
| Eco47I | GGWCC | 1 cut(s) | 384 |
| Eco57I | CTGAAG | 1 cut(s) | 592 |
| Eco88I | CYCGRG | 1 cut(s) | 544 |
| Eco91I | GGTNACC | 1 cut(s) | 934 |
| EcoO65I | GGTNACC | 1 cut(s) | 934 |
| FaeI | CATG | 6 cut(s) | 88, 442, 520, 772, 1079, 1160 |
| FaqI | GGGAC | 2 cut(s) | 675, 940 |
| FatI | CATG | 6 cut(s) | 84, 438, 516, 768, 1075, 1156 |
| FbaI | TGATCA | 2 cut(s) | 1174, 1270 |
| FblI | GTMKAC | 2 cut(s) | 5, 996 |
| Fnu4HI | GCNGC | 1 cut(s) | 813 |
| FokI | GGATG | 4 cut(s) | 209, 305, 965, 1082 |
| Fsp4HI | GCNGC | 1 cut(s) | 813 |
| FspBI | CTAG | 2 cut(s) | 237, 1065 |
| GluI | GCNGC | 1 cut(s) | 813 |
| GsuI | CTGGAG | 2 cut(s) | 696, 1284 |
| HaeIII | GGCC | 3 cut(s) | 89, 542, 550 |
| HapII | CCGG | 2 cut(s) | 9, 940 |
| HgaI | GACGC | 1 cut(s) | 838 |
| Hin1II | CATG | 6 cut(s) | 88, 442, 520, 772, 1079, 1160 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HindIII | AAGCTT | 1 cut(s) | 686 |
| HinfI | GANTC | 4 cut(s) | 428, 1079, 1085, 1129 |
| HpaII | CCGG | 2 cut(s) | 9, 940 |
| Hpy166II | GTNNAC | 5 cut(s) | 6, 523, 604, 760, 997 |
| Hpy188III | TCNNGA | 3 cut(s) | 650, 1104, 1263 |
| Hpy8I | GTNNAC | 5 cut(s) | 6, 523, 604, 760, 997 |
| HpyAV | CCTTC | 3 cut(s) | 203, 1160, 1240 |
| HpyCH4III | ACNGT | 5 cut(s) | 206, 583, 668, 994, 1210 |
| HpyCH4IV | ACGT | 1 cut(s) | 489 |
| HpyCH4V | TGCA | 4 cut(s) | 65, 223, 420, 1258 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1031 |
| HpyF3I | CTNAG | 9 cut(s) | 273, 366, 526, 801, 947, 1010, 1089, 1183, 1353 |
| HpySE526I | ACGT | 1 cut(s) | 489 |
| Hsp92II | CATG | 6 cut(s) | 88, 442, 520, 772, 1079, 1160 |
| Ksp22I | TGATCA | 2 cut(s) | 1174, 1270 |
| Kzo9I | GATC | 6 cut(s) | 74, 79, 105, 358, 1174, 1270 |
| LmnI | GCTCC | 2 cut(s) | 677, 765 |
| Lsp1109I | GCAGC | 1 cut(s) | 799 |
| MaeI | CTAG | 2 cut(s) | 237, 1065 |
| MaeII | ACGT | 1 cut(s) | 489 |
| MaeIII | GTNAC | 6 cut(s) | 342, 577, 826, 934, 1123, 1342 |
| MalI | GATC | 6 cut(s) | 76, 81, 107, 360, 1176, 1272 |
| MboI | GATC | 6 cut(s) | 74, 79, 105, 358, 1174, 1270 |
| MboII | GAAGA | 8 cut(s) | 26, 56, 63, 66, 69, 635, 638, 870 |
| MflI | RGATCY | 1 cut(s) | 105 |
| MluCI | AATT | 9 cut(s) | 32, 60, 246, 388, 444, 773, 872, 1202, 1283 |
| MlyI | GAGTC | 2 cut(s) | 1088, 1123 |
| MmeI | TCCRAC | 1 cut(s) | 1062 |
| MseI | TTAA | 4 cut(s) | 410, 684, 1188, 1205 |
| MspA1I | CMGCKG | 1 cut(s) | 320 |
| MspI | CCGG | 2 cut(s) | 9, 940 |
| MspR9I | CCNGG | 1 cut(s) | 940 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1031 |
| NciI | CCSGG | 1 cut(s) | 940 |
| NdeII | GATC | 6 cut(s) | 74, 79, 105, 358, 1174, 1270 |
| NheI | GCTAGC | 1 cut(s) | 236 |
| NlaIII | CATG | 6 cut(s) | 88, 442, 520, 772, 1079, 1160 |
| NmuCI | GTSAC | 5 cut(s) | 342, 826, 934, 1123, 1342 |
| NspV | TTCGAA | 2 cut(s) | 338, 401 |
| PaeR7I | CTCGAG | 1 cut(s) | 544 |
| PceI | AGGCCT | 1 cut(s) | 550 |
| PfeI | GAWTC | 2 cut(s) | 428, 1085 |
| PinAI | ACCGGT | 1 cut(s) | 8 |
| PkrI | GCNGC | 1 cut(s) | 814 |
| PleI | GAGTC | 2 cut(s) | 1087, 1123 |
| PpsI | GAGTC | 2 cut(s) | 1087, 1123 |
| PspEI | GGTNACC | 1 cut(s) | 934 |
| PspPI | GGNCC | 2 cut(s) | 88, 384 |
| PspXI | VCTCGAGB | 1 cut(s) | 544 |
| PsuI | RGATCY | 1 cut(s) | 105 |
| RsaI | GTAC | 2 cut(s) | 184, 605 |
| RsaNI | GTAC | 2 cut(s) | 183, 604 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| SaqAI | TTAA | 4 cut(s) | 410, 684, 1188, 1205 |
| SatI | GCNGC | 1 cut(s) | 813 |
| Sau3AI | GATC | 6 cut(s) | 74, 79, 105, 358, 1174, 1270 |
| Sau96I | GGNCC | 2 cut(s) | 88, 384 |
| SchI | GAGTC | 2 cut(s) | 1088, 1123 |
| ScrFI | CCNGG | 1 cut(s) | 940 |
| SfcI | CTRYAG | 1 cut(s) | 993 |
| Sfr274I | CTCGAG | 1 cut(s) | 544 |
| SfuI | TTCGAA | 2 cut(s) | 338, 401 |
| SinI | GGWCC | 1 cut(s) | 384 |
| SlaI | CTCGAG | 1 cut(s) | 544 |
| SmlI | CTYRAG | 1 cut(s) | 544 |
| SmoI | CTYRAG | 1 cut(s) | 544 |
| Sse9I | AATT | 9 cut(s) | 32, 60, 246, 388, 444, 773, 872, 1202, 1283 |
| SseBI | AGGCCT | 1 cut(s) | 550 |
| SsiI | CCGC | 3 cut(s) | 320, 983, 1220 |
| SspMI | CTAG | 2 cut(s) | 237, 1065 |
| StuI | AGGCCT | 1 cut(s) | 550 |
| StyD4I | CCNGG | 1 cut(s) | 938 |
| TaaI | ACNGT | 5 cut(s) | 206, 583, 668, 994, 1210 |
| TaiI | ACGT | 1 cut(s) | 492 |
| TaqI | TCGA | 6 cut(s) | 5, 215, 338, 401, 545, 784 |
| TasI | AATT | 9 cut(s) | 32, 60, 246, 388, 444, 773, 872, 1202, 1283 |
| TatI | WGTACW | 1 cut(s) | 603 |
| TfiI | GAWTC | 2 cut(s) | 428, 1085 |
| Tru1I | TTAA | 4 cut(s) | 410, 684, 1188, 1205 |
| Tru9I | TTAA | 4 cut(s) | 410, 684, 1188, 1205 |
| TscAI | CASTG | 3 cut(s) | 831, 847, 997 |
| TseFI | GTSAC | 5 cut(s) | 342, 826, 934, 1123, 1342 |
| TseI | GCWGC | 1 cut(s) | 812 |
| Tsp45I | GTSAC | 5 cut(s) | 342, 826, 934, 1123, 1342 |
| TspDTI | ATGAA | 3 cut(s) | 527, 724, 885 |
| TspGWI | ACGGA | 1 cut(s) | 371 |
| TspRI | CASTG | 3 cut(s) | 831, 847, 997 |
| VpaK11BI | GGWCC | 1 cut(s) | 384 |
| XapI | RAATTY | 2 cut(s) | 246, 872 |
| XhoI | CTCGAG | 1 cut(s) | 544 |
| XmiI | GTMKAC | 2 cut(s) | 5, 996 |
| XspI | CTAG | 2 cut(s) | 237, 1065 |