Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0014597

Physical Location & Seq

Genomic Coordinates Forward (+)

60332115 .. 60336296

Gene Structure 4182 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020033

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGTGTTGCATGCTATGGAGGTTGATACTGATCGCAGTGAACATCAGTATGAAGAAGAATATGAATTGCTTGATCTTGGCTCAGTTTCCGATACCAGCAAACGCACCATATGTTCTTTCTGGTTTAGACACAATGCATCCGGTACTGATTATAAATGACAAATTGAAGTTGATCATATCATCCCCATCTACCCAAATTGTAAATTTCTTTGATCACCTTCTCCGGCAATGTACTCTACCTGAACACTGTAAACAAGTTCACACTCAAATTGTTACAACAGGCAGGTGTCAATCAGCGTTCCTGGCTGCCCGACTCGTAAATGTTTATGCACATCTTGGGCTTGTTGTTGATGCCCAGAAAGTTTTTGACACCACCCCGTTTCAAGGTACATCAAACATGCTCTTGTGGAATTCAATTCTTAGAGCAAATGTGTCTCATGGGTTTTATGAAAAAGCACTCAAACTATATGATAAAATGCGAAGACTTGGAGTTTGGGCTGATGGGTTTACTCTTCCCCTGGTTATTAGGGCCTGTGCATTTATGGGTAGGTTTAGGCTATGCAAGAATGTACATAGTCATGTTTTACAAATGGGTTTTCAAAATCATCTCCATGTTGTCAATGAGTTGATGGGAATGTATGGGAAACTTGGTAAAATGGACTGTGCCCGCCATCTGTTTGATAAAATGAGCGTGAGAAGCTATGTTTCTTGGAATACTCTGGTTTCTAGTTATGCCTTTAACTATGATTCTGATGGTGCATCTGAGATTTTTAATAGGATGGAGTTAGATGGGTTGGAGCCAAACCCTGTGACTTGGACATCATTATTGTCAAGTCATGCTCGTTGTGGCCGCAATGAGAAGACCATGGAGTTGTTTGGTATGATGAGGGTTAGAGGAATTGAGACAACTGCTGAAGCGCTTGCTGTGGTGTTATCTGTATGTGCTGATGTGGCTGTGGTTGACAAGGGTAAGAAGATTCATGGATATGTTGTTAGAGGTGGTTTCGAAGAGTACTTGTTTGTGAAAAATGCACTAATATGCATGTATGGAAAATGTGGAGATGTAGAAAATGCATACAAATTATTTTTGGTGATGGAAAGCAAAAACCTAGTGAGTTGGAATGCTTTGATCTCATCATATGCTGAATCTGGTTTGTGTGATGAGGCTTTTGCAATATTTTCCCAGCTAGATGCTCATCCAGTTATAACACCTAATATCATAAGTTGGAGTGCTGTTATTCAAGGGTTCTTGTCCACTGGACAAGGAGAGAAGTCTCTGGAACTCTTTCGGCAGATGCAGAGAGCAGGAGTACTGCCCAATTGTGTCACTATATCCAGTGTATTATCTGTTTGTGCAGAATTAGCAGCAATTAATCTTGGCAGGGAAATTCATGGTCATGTGGTAAGGGCTTTGATGGATAGCAACATTTTGGTTGGAAATGGCTTGATCAATATGTACACAAAATGTGGAAGTTTTGAGGAAGGGCATAGAGTATTTGAGAATATTGACAGTAAGGACTTGATTTCGTGGAACACAATGATTGCTGGTTATGGGATGCATGGACTCGGTGAGAATGCTCTAAGAATTTTTCATAGGATGGTCAAGACGGGATTCAAGCCAGACAATGTAACATTCATCGCAGTTCTTTCGGCTTGTAGTCATGCTGGGCTAGTTACCGAGGGTCGCCTCCTTTTTGATCAAATGATTGAAGTTTATGGTGTAAAACCCCAAATGGAGCACTATGCATGCATGGTTGACCTTCTTGGCCGTTCAGGGTTATTGCAAGAAGGAAGCAACATTGTGAAAAACATGCCAATGAAACCCAATGCTTGTGTCTGGAGCGCTCTTCTCAACTCTTGTAGGATGCACAAAAATACAGATATTGCAGAAGAAACTGCCACCCATATATTCAATATCAACTCGGAAATGGCCGGGAGCTACATGTTGATGTCAAATATTTATGCTGCTAGCGGGAGATGGGAGGACTCGGCAAAAGTGAGAATCTCAGCGAAGGCAAAGGGTTTAAGGAAAATCCGGGGGCAAAGCTGGATTCAGGTTAAGAATAAGGTTTTTATATTCTCAGCAGGGAATACCATGCAAGCAGGCTTGGAGTTAATTCATGGTATCCTTTATGACTTGGCACTTCAAATGGAAATTTCCTCGAACGGATCCAATATGATGAATGGGATTGCATGGAATCAGAATGGAAAATGGGACCAAACTATTGGAACCTGCTTTATTTTCAAAGAAGGTGCTAGTTCTGTAATTCATGAAGAAACAGGATTGTCGGCAAATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0023052 GO:0031930 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

767

Amino Acids

85.12

Weight (kDa)

8.34

Isoelectric Point (pI)

40.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	136 - 164	7.5e-06	PPR repeat
PPR_2	PF13041	234 - 280	7.1e-08	PPR repeat family
PPR_2	PF13041	404 - 452	4.5e-10	PPR repeat family
PPR_2	PF13041	506 - 553	1.9e-11	PPR repeat family
PPR	PF01535	508 - 537	4.6e-07	PPR repeat
E_motif	PF20431	623 - 685	5.1e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014597)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17630 AT1G17630
fragaria_vesca	FvH4_6g33510
malus_domestica	MD17G1187400.v1.1
prunus_persica	Prupe.3G049200_v2.0.a1
pyrus_communis	pycom17g19640
rosa_laevigata	RLG00000020033
rosa_multiflora	Rmu_co8432359.1_g000001 Rmu_sc0003507.1_g000019 Rmu_sc0024801.1_g000002
rosa_roxburghii	Rroxscaffold_2G00101870 Rroxscaffold_2G00101920
rosa_rugosa	Rorug02G0380900
rosa_samantha	Rh2AG434000 Rh2CG419700 Rh2DG452100
rosa_wichuraiana	Rw2G035380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	152, 1205
AarI	CACCTGC	1 cut(s)	273
Acc36I	ACCTGC	2 cut(s)	273, 2240
AciI	CCGC	3 cut(s)	667, 850, 1971
AclWI	GGATC	2 cut(s)	2163, 2176
AcoI	YGGCCR	3 cut(s)	847, 1765, 1929
AcsI	RAATTY	5 cut(s)	202, 409, 1386, 1584, 2154
AcuI	CTGAAG	1 cut(s)	933
AfaI	GTAC	7 cut(s)	144, 232, 388, 570, 1013, 1311, 1457
AfeI	AGCGCT	2 cut(s)	918, 1843
AfiI	CCNNNNNNNGG	1 cut(s)	383
AflIII	ACRYGT	1 cut(s)	1941
AjnI	CCWGG	2 cut(s)	300, 516
AluBI	AGCT	4 cut(s)	699, 1186, 1938, 2046
AluI	AGCT	4 cut(s)	699, 1186, 1938, 2046
Alw21I	GWGCWC	1 cut(s)	1740
Alw26I	GTCTC	3 cut(s)	438, 896, 1278
AlwI	GGATC	2 cut(s)	2163, 2176
Aor51HI	AGCGCT	2 cut(s)	918, 1843
AoxI	GGCC	4 cut(s)	528, 847, 1765, 1929
ApeKI	GCWGC	3 cut(s)	305, 1364, 1964
ApoI	RAATTY	5 cut(s)	202, 409, 1386, 1584, 2154
ArsI	GACNNNNNNTTYG	2 cut(s)	474, 506
AseI	ATTAAT	1 cut(s)	1371
Asp700I	GAANNNNTTC	1 cut(s)	1284
AspLEI	GCGC	2 cut(s)	919, 1844
AspS9I	GGNCC	2 cut(s)	528, 2215
AsuC2I	CCSGG	2 cut(s)	1933, 2036
AsuHPI	GGTGA	3 cut(s)	206, 1102, 1580
AsuII	TTCGAA	1 cut(s)	1005
AsuNHI	GCTAGC	1 cut(s)	1967
AvaII	GGWCC	1 cut(s)	2215
BaeGI	GKGCMC	1 cut(s)	667
BamHI	GGATCC	1 cut(s)	2168
BbsI	GAAGAC	2 cut(s)	487, 866
Bbv12I	GWGCWC	1 cut(s)	1740
BbvI	GCAGC	3 cut(s)	292, 1376, 1951
BceAI	ACGGC	1 cut(s)	1752
BcgI	CGANNNNNNTGC	2 cut(s)	1629, 1663
BciT130I	CCWGG	2 cut(s)	302, 518
BciVI	GTATCC	1 cut(s)	2135
BclI	TGATCA	4 cut(s)	171, 211, 1446, 1696
BcnI	CCSGG	2 cut(s)	1933, 2036
BcoDI	GTCTC	3 cut(s)	438, 896, 1278
BfaI	CTAG	6 cut(s)	726, 1109, 1187, 1670, 1968, 2256
BfoI	RGCGCY	2 cut(s)	920, 1845
BfuAI	ACCTGC	2 cut(s)	273, 2240
BfuI	GTATCC	1 cut(s)	2135
BisI	GCNGC	4 cut(s)	306, 850, 1365, 1965
BlsI	GCNGC	4 cut(s)	307, 851, 1366, 1966
BmcAI	AGTACT	2 cut(s)	1013, 1311
Bme1390I	CCNGG	4 cut(s)	302, 518, 1933, 2036
Bme18I	GGWCC	1 cut(s)	2215
BmgT120I	GGNCC	2 cut(s)	528, 2215
BmiI	GGNNCC	4 cut(s)	798, 2170, 2216, 2230
BmrFI	CCNGG	4 cut(s)	302, 518, 1933, 2036
BmsI	GCATC	7 cut(s)	145, 340, 767, 1180, 1284, 1545, 1854
BmtI	GCTAGC	1 cut(s)	1971
BpiI	GAAGAC	2 cut(s)	487, 866
BpmI	CTGGAG	1 cut(s)	1858
Bpu14I	TTCGAA	1 cut(s)	1005
BpuMI	CCSGG	2 cut(s)	1933, 2036
BsaBI	GATNNNNATC	2 cut(s)	29, 1194
BsaJI	CCNNGG	4 cut(s)	516, 864, 1677, 2035
BsaWI	WCCGGW	1 cut(s)	139
Bsc4I	CCNNNNNNNGG	1 cut(s)	383
Bse1I	ACTGG	3 cut(s)	1199, 1261, 1335
Bse3DI	GCAATG	2 cut(s)	233, 859
Bse8I	GATNNNNATC	2 cut(s)	29, 1194
BseBI	CCWGG	2 cut(s)	302, 518
BseDI	CCNNGG	4 cut(s)	516, 864, 1677, 2035
BseGI	GGATG	7 cut(s)	136, 179, 783, 1195, 1560, 1602, 1869
BseJI	GATNNNNATC	2 cut(s)	29, 1194
BseLI	CCNNNNNNNGG	1 cut(s)	383
BseMI	GCAATG	2 cut(s)	233, 859
BseMII	CTCAG	4 cut(s)	95, 753, 2019, 2094
BseNI	ACTGG	3 cut(s)	1199, 1261, 1335
BseSI	GKGCMC	1 cut(s)	667
BseXI	GCAGC	3 cut(s)	292, 1376, 1951
BseYI	CCCAGC	2 cut(s)	1182, 1664
BsgI	GTGCAG	1 cut(s)	1374
BshFI	GGCC	4 cut(s)	530, 849, 1767, 1931
BsiHKAI	GWGCWC	1 cut(s)	1740
BsiSI	CCGG	4 cut(s)	140, 223, 1932, 2035
BslFI	GGGAC	1 cut(s)	2228
BslI	CCNNNNNNNGG	1 cut(s)	383
BsmAI	GTCTC	3 cut(s)	438, 896, 1278
BsmFI	GGGAC	1 cut(s)	2228
BsmI	GAATGC	2 cut(s)	1126, 1579
BsnI	GGCC	4 cut(s)	530, 849, 1767, 1931
Bsp119I	TTCGAA	1 cut(s)	1005
Bsp1286I	GDGCHC	2 cut(s)	667, 1740
Bsp1407I	TGTACA	2 cut(s)	568, 1455
Bsp143I	GATC	8 cut(s)	30, 72, 171, 211, 1128, 1446, 1696, 2168
Bsp19I	CCATGG	1 cut(s)	864
BspACI	CCGC	3 cut(s)	667, 850, 1971
BspANI	GGCC	4 cut(s)	530, 849, 1767, 1931
BspCNI	CTCAG	4 cut(s)	94, 754, 2018, 2093
BspHI	TCATGA	1 cut(s)	2269
BspLI	GGNNCC	4 cut(s)	798, 2170, 2216, 2230
BspMI	ACCTGC	2 cut(s)	273, 2240
BspOI	GCTAGC	1 cut(s)	1971
BspPI	GGATC	2 cut(s)	2163, 2176
BspQI	GCTCTTC	1 cut(s)	1851
BspT104I	TTCGAA	1 cut(s)	1005
BsrDI	GCAATG	2 cut(s)	233, 859
BsrGI	TGTACA	2 cut(s)	568, 1455
BsrI	ACTGG	3 cut(s)	1199, 1261, 1335
BssECI	CCNNGG	4 cut(s)	516, 864, 1677, 2035
BssMI	GATC	8 cut(s)	30, 72, 171, 211, 1128, 1446, 1696, 2168
BssT1I	CCWWGG	1 cut(s)	864
Bst2UI	CCWGG	2 cut(s)	302, 518
Bst4CI	ACNGT	3 cut(s)	248, 662, 1511
Bst6I	CTCTTC	3 cut(s)	516, 1002, 1851
BstAUI	TGTACA	2 cut(s)	568, 1455
BstBI	TTCGAA	1 cut(s)	1005
BstC8I	GCNNGC	7 cut(s)	11, 667, 921, 1747, 1969, 2100, 2104
BstDEI	CTNAG	6 cut(s)	81, 419, 762, 1580, 2005, 2080
BstDSI	CCRYGG	1 cut(s)	864
BstF5I	GGATG	7 cut(s)	136, 179, 783, 1195, 1560, 1602, 1869
BstH2I	RGCGCY	2 cut(s)	920, 1845
BstHHI	GCGC	2 cut(s)	919, 1844
BstKTI	GATC	8 cut(s)	33, 75, 174, 214, 1131, 1449, 1699, 2171
BstMAI	GTCTC	3 cut(s)	438, 896, 1278
BstMBI	GATC	8 cut(s)	30, 72, 171, 211, 1128, 1446, 1696, 2168
BstMWI	GCNNNNNNNGC	4 cut(s)	302, 696, 950, 1361
BstNI	CCWGG	2 cut(s)	302, 518
BstNSI	RCATGY	6 cut(s)	13, 400, 1045, 1749, 1813, 1945
BstSCI	CCNGG	4 cut(s)	300, 516, 1931, 2034
BstSLI	GKGCMC	1 cut(s)	667
BstV1I	GCAGC	3 cut(s)	292, 1376, 1951
BstV2I	GAAGAC	2 cut(s)	487, 866
BstX2I	RGATCY	1 cut(s)	2168
BstXI	CCANNNNNNTGG	1 cut(s)	2225
BstYI	RGATCY	1 cut(s)	2168
BsuI	GTATCC	1 cut(s)	2135
BsuRI	GGCC	4 cut(s)	530, 849, 1767, 1931
BtgI	CCRYGG	1 cut(s)	864
BtgZI	GCGATG	1 cut(s)	1621
BtsCI	GGATG	7 cut(s)	136, 179, 783, 1195, 1560, 1602, 1869
BtsI	GCAGTG	1 cut(s)	42
BtsIMutI	CAGTG	4 cut(s)	42, 244, 1254, 1342
BveI	ACCTGC	2 cut(s)	273, 2240
Cac8I	GCNNGC	7 cut(s)	11, 667, 921, 1747, 1969, 2100, 2104
CciI	TCATGA	1 cut(s)	2269
CfoI	GCGC	2 cut(s)	919, 1844
Cfr13I	GGNCC	2 cut(s)	528, 2215
Csp6I	GTAC	7 cut(s)	143, 231, 387, 569, 1012, 1310, 1456
CviQI	GTAC	7 cut(s)	143, 231, 387, 569, 1012, 1310, 1456
DdeI	CTNAG	6 cut(s)	81, 419, 762, 1580, 2005, 2080
DpnI	GATC	8 cut(s)	32, 74, 173, 213, 1130, 1448, 1698, 2170
DpnII	GATC	8 cut(s)	30, 72, 171, 211, 1128, 1446, 1696, 2168
EaeI	YGGCCR	3 cut(s)	847, 1765, 1929
Eam1104I	CTCTTC	3 cut(s)	516, 1002, 1851
EarI	CTCTTC	3 cut(s)	516, 1002, 1851
Eco130I	CCWWGG	1 cut(s)	864
Eco47I	GGWCC	1 cut(s)	2215
Eco47III	AGCGCT	2 cut(s)	918, 1843
Eco57I	CTGAAG	1 cut(s)	933
EcoO109I	RGGNCCY	1 cut(s)	528
EcoRI	GAATTC	1 cut(s)	409
EcoRII	CCWGG	2 cut(s)	300, 516
EcoT14I	CCWWGG	1 cut(s)	864
EcoT22I	ATGCAT	7 cut(s)	138, 1043, 1075, 1560, 1747, 1751, 2299
ErhI	CCWWGG	1 cut(s)	864
FaqI	GGGAC	1 cut(s)	2228
FauI	CCCGC	2 cut(s)	674, 1964
FauNDI	CATATG	2 cut(s)	109, 1138
FbaI	TGATCA	4 cut(s)	171, 211, 1446, 1696
Fnu4HI	GCNGC	4 cut(s)	306, 850, 1365, 1965
FokI	GGATG	7 cut(s)	123, 166, 790, 1182, 1567, 1609, 1876
Fsp4HI	GCNGC	4 cut(s)	306, 850, 1365, 1965
FspBI	CTAG	6 cut(s)	726, 1109, 1187, 1670, 1968, 2256
GlaI	GCGC	2 cut(s)	918, 1843
GluI	GCNGC	4 cut(s)	306, 850, 1365, 1965
GsaI	CCCAGC	2 cut(s)	1186, 1668
GsuI	CTGGAG	1 cut(s)	1858
HaeII	RGCGCY	2 cut(s)	920, 1845
HaeIII	GGCC	4 cut(s)	530, 849, 1767, 1931
HapII	CCGG	4 cut(s)	140, 223, 1932, 2035
HhaI	GCGC	2 cut(s)	919, 1844
Hin6I	GCGC	2 cut(s)	917, 1842
HinP1I	GCGC	2 cut(s)	917, 1842
HincII	GTYRAC	2 cut(s)	961, 1756
HindII	GTYRAC	2 cut(s)	961, 1756
HpaII	CCGG	4 cut(s)	140, 223, 1932, 2035
HphI	GGTGA	3 cut(s)	206, 1102, 1580
Hpy166II	GTNNAC	8 cut(s)	40, 251, 259, 507, 961, 1254, 1458, 1756
Hpy188I	TCNGA	5 cut(s)	90, 751, 763, 1924, 2202
Hpy188III	TCNNGA	4 cut(s)	1277, 1603, 1837, 2270
Hpy8I	GTNNAC	8 cut(s)	40, 251, 259, 507, 961, 1254, 1458, 1756
HpyAV	CCTTC	6 cut(s)	227, 1475, 1769, 1781, 2005, 2243
HpyCH4III	ACNGT	3 cut(s)	248, 662, 1511
HpyF10VI	GCNNNNNNNGC	4 cut(s)	302, 696, 950, 1361
HpyF3I	CTNAG	6 cut(s)	81, 419, 762, 1580, 2005, 2080
HspAI	GCGC	2 cut(s)	917, 1842
Ksp22I	TGATCA	4 cut(s)	171, 211, 1446, 1696
Kzo9I	GATC	8 cut(s)	30, 72, 171, 211, 1128, 1446, 1696, 2168
LguI	GCTCTTC	1 cut(s)	1851
LmnI	GCTCC	4 cut(s)	796, 1735, 1839, 1935
Lsp1109I	GCAGC	3 cut(s)	292, 1376, 1951
LweI	GCATC	7 cut(s)	145, 340, 767, 1180, 1284, 1545, 1854
MaeI	CTAG	6 cut(s)	726, 1109, 1187, 1670, 1968, 2256
MaeIII	GTNAC	5 cut(s)	271, 808, 1324, 1627, 1672
MalI	GATC	8 cut(s)	32, 74, 173, 213, 1130, 1448, 1698, 2170
MboI	GATC	8 cut(s)	30, 72, 171, 211, 1128, 1446, 1696, 2168
MfeI	CAATTG	1 cut(s)	1318
MflI	RGATCY	1 cut(s)	2168
MhlI	GDGCHC	2 cut(s)	667, 1740
MlyI	GAGTC	3 cut(s)	306, 1557, 1979
MmeI	TCCRAC	4 cut(s)	774, 1097, 1205, 1414
Mph1103I	ATGCAT	7 cut(s)	138, 1043, 1075, 1560, 1747, 1751, 2299
MroXI	GAANNNNTTC	1 cut(s)	1284
MseI	TTAA	6 cut(s)	738, 771, 1371, 2024, 2058, 2114
MslI	CAYNNNNRTG	8 cut(s)	47, 576, 609, 984, 1036, 1395, 1814, 1946
MspI	CCGG	4 cut(s)	140, 223, 1932, 2035
MspR9I	CCNGG	4 cut(s)	302, 518, 1933, 2036
MunI	CAATTG	1 cut(s)	1318
Mva1269I	GAATGC	2 cut(s)	1126, 1579
MvaI	CCWGG	2 cut(s)	302, 518
MwoI	GCNNNNNNNGC	4 cut(s)	302, 696, 950, 1361
NciI	CCSGG	2 cut(s)	1933, 2036
NcoI	CCATGG	1 cut(s)	864
NdeI	CATATG	2 cut(s)	109, 1138
NdeII	GATC	8 cut(s)	30, 72, 171, 211, 1128, 1446, 1696, 2168
NheI	GCTAGC	1 cut(s)	1967
NlaIV	GGNNCC	4 cut(s)	798, 2170, 2216, 2230
NmeAIII	GCCGAG	1 cut(s)	1967
NmuCI	GTSAC	2 cut(s)	808, 1324
NsiI	ATGCAT	7 cut(s)	138, 1043, 1075, 1560, 1747, 1751, 2299
NspI	RCATGY	6 cut(s)	13, 400, 1045, 1749, 1813, 1945
NspV	TTCGAA	1 cut(s)	1005
PaeI	GCATGC	2 cut(s)	13, 1749
PagI	TCATGA	1 cut(s)	2269
PaqCI	CACCTGC	1 cut(s)	273
PciI	ACATGT	1 cut(s)	1941
PciSI	GCTCTTC	1 cut(s)	1851
PctI	GAATGC	2 cut(s)	1126, 1579
PdmI	GAANNNNTTC	1 cut(s)	1284
PfeI	GAWTC	7 cut(s)	746, 976, 1145, 1611, 2001, 2050, 2197
PkrI	GCNGC	4 cut(s)	307, 851, 1366, 1966
PleI	GAGTC	3 cut(s)	306, 1557, 1979
PpsI	GAGTC	3 cut(s)	306, 1557, 1979
PscI	ACATGT	1 cut(s)	1941
PshBI	ATTAAT	1 cut(s)	1371
PsiI	TTATAA	2 cut(s)	152, 1205
Psp6I	CCWGG	2 cut(s)	300, 516
PspFI	CCCAGC	2 cut(s)	1182, 1664
PspGI	CCWGG	2 cut(s)	300, 516
PspN4I	GGNNCC	4 cut(s)	798, 2170, 2216, 2230
PspPI	GGNCC	2 cut(s)	528, 2215
PsuI	RGATCY	1 cut(s)	2168
RsaI	GTAC	7 cut(s)	144, 232, 388, 570, 1013, 1311, 1457
RsaNI	GTAC	7 cut(s)	143, 231, 387, 569, 1012, 1310, 1456
RseI	CAYNNNNRTG	8 cut(s)	47, 576, 609, 984, 1036, 1395, 1814, 1946
SapI	GCTCTTC	1 cut(s)	1851
SaqAI	TTAA	6 cut(s)	738, 771, 1371, 2024, 2058, 2114
SatI	GCNGC	4 cut(s)	306, 850, 1365, 1965
Sau3AI	GATC	8 cut(s)	30, 72, 171, 211, 1128, 1446, 1696, 2168
Sau96I	GGNCC	2 cut(s)	528, 2215
ScaI	AGTACT	2 cut(s)	1013, 1311
SchI	GAGTC	3 cut(s)	306, 1557, 1979
ScrFI	CCNGG	4 cut(s)	302, 518, 1933, 2036
SduI	GDGCHC	2 cut(s)	667, 1740
SfaNI	GCATC	7 cut(s)	145, 340, 767, 1180, 1284, 1545, 1854
SfuI	TTCGAA	1 cut(s)	1005
SinI	GGWCC	1 cut(s)	2215
SmiMI	CAYNNNNRTG	8 cut(s)	47, 576, 609, 984, 1036, 1395, 1814, 1946
SphI	GCATGC	2 cut(s)	13, 1749
SsiI	CCGC	3 cut(s)	667, 850, 1971
SspI	AATATT	3 cut(s)	1176, 1504, 1957
SspMI	CTAG	6 cut(s)	726, 1109, 1187, 1670, 1968, 2256
StyD4I	CCNGG	4 cut(s)	300, 516, 1931, 2034
StyI	CCWWGG	1 cut(s)	864
TaaI	ACNGT	3 cut(s)	248, 662, 1511
TaqI	TCGA	2 cut(s)	1005, 2162
TatI	WGTACW	5 cut(s)	230, 568, 1011, 1309, 1455
TauI	GCSGC	1 cut(s)	852
TfiI	GAWTC	7 cut(s)	746, 976, 1145, 1611, 2001, 2050, 2197
Tru1I	TTAA	6 cut(s)	738, 771, 1371, 2024, 2058, 2114
Tru9I	TTAA	6 cut(s)	738, 771, 1371, 2024, 2058, 2114
TscAI	CASTG	4 cut(s)	42, 251, 1261, 1342
TseFI	GTSAC	2 cut(s)	808, 1324
TseI	GCWGC	3 cut(s)	305, 1364, 1964
Tsp45I	GTSAC	2 cut(s)	808, 1324
TspGWI	ACGGA	1 cut(s)	2181
TspRI	CASTG	4 cut(s)	42, 251, 1261, 1342
VpaK11BI	GGWCC	1 cut(s)	2215
VspI	ATTAAT	1 cut(s)	1371
XapI	RAATTY	5 cut(s)	202, 409, 1386, 1584, 2154
XceI	RCATGY	6 cut(s)	13, 400, 1045, 1749, 1813, 1945
XmnI	GAANNNNTTC	1 cut(s)	1284
XspI	CTAG	6 cut(s)	726, 1109, 1187, 1670, 1968, 2256
ZrmI	AGTACT	2 cut(s)	1013, 1311
Zsp2I	ATGCAT	7 cut(s)	138, 1043, 1075, 1560, 1747, 1751, 2299

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.