Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0014597

Physical Location & Seq

Genomic Coordinates Forward (+)

57350179 .. 57352263

Gene Structure 2085 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG419700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGAATACATATCGTCATATTTACCCGAGCCAGATCATATCATCCCCATCCGTTACTAACCAAATTGTAAATTTCTTTGATCACCTTCTCCGGCAATGTACCCTACCTGAACACTGTAAACAAGTTCACACTCAAATTGTTACGACAGGCGGGTGTCAATCAGCGTTCTTGGCAGCCCGACTCATTAATGTTTATGCACGTCTTGGGCTAGTTGTTGATGCCCAGAAAGTCTTTGACTCCACCCAGTTTCAAGGCACATCCAACATGCTCTTGTGGAATGCAGTTCTTAGAGCGAATGTGTCTCATGGATTTTATGAAAAAGCACTTCAAATATATGATAAAATGCGAAGACTTGGAGTTTGGGCTGATGGGTTTACTCTTCCCCTGGTTATTAGGGCCTGTGCATTTATGGGTAGATTTAGGCTATGCAAGAATGTGCATAGTCATGTTTTACAAATGGGTTTTCAAAATCATCTCCATGTTGTCAATGAGTTGATGGGAATGTATGGGAAACTTGGTAACATGGACTATGCCCGCCAACTGTTTGATAAAATGAGCGTGAGAAGCTATGTTTCTTGGAATACTCTGGTTTCTAGCTATGCCTTTAACTATGATTGTGATGGTGCATCTGAGATTTTTAATAGGATGGAGTTAGATGGGTTGGAGCCAAACCCTGTGACTTGGACGTCATTATTGTCAAGTCATGCTCGTTGCGGCCGCAGTGAGAAGACCATGGAGTTGTTTGGTATGATGAGGGTTAGAGGAATTGAGACAACTGCTGAAGCGCTTGCTGTGGTGTTAGCTGTATGTGCTGATGTGGCTGTGGTTGACAAGGGTAAGAAGATTCATGGATATGTTGTTAGAGGTGGTTTCGAAGAGTACTTGTTTGTGAAAAATGCACTAATATGCATGTATGGAAAATGTGGAGATGTAGAAAATGCATACAAGTTATTTTTGGTGATGCAAAGCAAAAACCTAGTGAGTTGGAATGCTTTGATCTCATCATATGCTGAATCTGGTTTGTGTGATGAGGCTTTTGCAATATTTTCCCAGCTAGATGCTCATCCAGTTATGACACCTAATATCATAAGTTGGAGTGCTGTTATTCAAGGGTTCTCGTCCACTGGACAAGGAGAGAAGTCTCTGGAACTCTTTCGGCAGATGCAGAGAGCAGGAGTACTGCCCAATTGTGTCACTATATCCAGCGTATTATCTGTTTGTGCAGAATTAGCAGCAATTAATCTTGGCAGGGAAATTCATGGTCATGTGGTAAGGGCTTTGATGGATAGCAACATTTTGGTTGGAAATGGCTTGATCAATGTGTACACAAAATGTGGAAGTTTTGAGGAAGGGCATAGAGTATTTGAGAATATTGACAGTAAGGACTTGATTTCGTGGAACACAATGATTGCTGGTTATGGGATGCATGGACTCGGTGAGAATGCTCTAAGAATTTTTCATAGGATGGTCAAGATGGGATTCAAGCCAGACAATGTAACATTCATCGCTGTTCTTTCTGCTTGTAGTCATGCTGGGCTAGTTACCGAGGGTCGCCTCCTTTTTGATCAAATGATTGGAGTTTATGGTGTAAAACCACAAATGGAGCACTATGCATGCATGGTTGACCTTCTTGGCCGTGCTGGGTTATTGCAAGAAGGAAGCAACATTGTGAAAAACATGCCAATGAAACCCAATGCTTGTGTCTGGAGCGCTCTTCTCAACTCTTGTAGGATGCACAAAAATACAGATATTGCAGAAGAAACTGCCACCCATATATTCAATATGAACTCGGAAATGGCCGGGAGCTACATGTTGATGTCAAATATTTATGCTGCTAGCGGGAGATGGGAGGACTCGGCAAAAGTGAGGATCTCAGCTAAGGCAAAGGGTTTAAGGAAAATCCGGGGGCAAAGCTGGATTCAGGTTAAGAATAAGGTTTTTATATTCTCAGCAGGGAATACCATGCAAGCAGGCTTGGAGTTAATTCATGGTATCCTTTATGACTTGGCACTTCAAATGGAAAGTGAGGGATATGTACCTAATAAGGAAGTCATTCAAGAGAATATTGACAAAGAACTGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0023052 GO:0031930 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

694

Amino Acids

77.35

Weight (kDa)

7.82

Isoelectric Point (pI)

43.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	190 - 236	9.9e-08	PPR repeat family
PPR	PF01535	226 - 256	4.4e-06	PPR repeat
PPR_2	PF13041	360 - 408	6.1e-10	PPR repeat family
PPR	PF01535	363 - 393	7.5e-06	PPR repeat
PPR_2	PF13041	462 - 509	1.1e-11	PPR repeat family
PPR	PF01535	464 - 494	6.7e-08	PPR repeat
E_motif	PF20431	579 - 641	3.2e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014597)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17630 AT1G17630
fragaria_vesca	FvH4_6g33510
malus_domestica	MD17G1187400.v1.1
prunus_persica	Prupe.3G049200_v2.0.a1
pyrus_communis	pycom17g19640
rosa_laevigata	RLG00000020033
rosa_multiflora	Rmu_co8432359.1_g000001 Rmu_sc0003507.1_g000019 Rmu_sc0024801.1_g000002
rosa_roxburghii	Rroxscaffold_2G00101870 Rroxscaffold_2G00101920
rosa_rugosa	Rorug02G0380900
rosa_samantha	Rh2AG434000 Rh2CG419700 Rh2DG452100
rosa_wichuraiana	Rw2G035380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	685
AatII	GACGTC	1 cut(s)	689
AciI	CCGC	5 cut(s)	150, 535, 714, 718, 1839
AclWI	GGATC	1 cut(s)	1877
AcoI	YGGCCR	3 cut(s)	715, 1633, 1797
AcsI	RAATTY	3 cut(s)	70, 1254, 1452
AcuI	CTGAAG	1 cut(s)	801
AcyI	GRCGYC	1 cut(s)	686
AfaI	GTAC	5 cut(s)	100, 881, 1179, 1325, 2037
AfeI	AGCGCT	2 cut(s)	786, 1711
AflIII	ACRYGT	1 cut(s)	1809
AgsI	TTSAA	8 cut(s)	251, 329, 467, 1109, 1483, 1780, 2015, 2057
AjiI	CACGTC	1 cut(s)	200
AjnI	CCWGG	1 cut(s)	384
AluBI	AGCT	7 cut(s)	567, 597, 803, 1054, 1806, 1877, 1914
AluI	AGCT	7 cut(s)	567, 597, 803, 1054, 1806, 1877, 1914
Alw21I	GWGCWC	1 cut(s)	1608
Alw26I	GTCTC	3 cut(s)	306, 764, 1146
AlwI	GGATC	1 cut(s)	1877
Ama87I	CYCGRG	1 cut(s)	25
Aor51HI	AGCGCT	2 cut(s)	786, 1711
AoxI	GGCC	4 cut(s)	396, 715, 1633, 1797
ApeKI	GCWGC	3 cut(s)	173, 1232, 1832
ApoI	RAATTY	3 cut(s)	70, 1254, 1452
ArsI	GACNNNNNNTTYG	2 cut(s)	342, 374
AseI	ATTAAT	2 cut(s)	186, 1239
Asp700I	GAANNNNTTC	2 cut(s)	1152, 2052
AspLEI	GCGC	2 cut(s)	787, 1712
AspS9I	GGNCC	1 cut(s)	396
AsuC2I	CCSGG	2 cut(s)	1801, 1904
AsuHPI	GGTGA	3 cut(s)	74, 970, 1448
AsuII	TTCGAA	1 cut(s)	873
AsuNHI	GCTAGC	1 cut(s)	1835
AvaI	CYCGRG	1 cut(s)	25
BbsI	GAAGAC	2 cut(s)	355, 734
Bbv12I	GWGCWC	1 cut(s)	1608
BbvI	GCAGC	3 cut(s)	185, 1244, 1819
BceAI	ACGGC	1 cut(s)	1620
BciT130I	CCWGG	1 cut(s)	386
BciVI	GTATCC	1 cut(s)	2003
BclI	TGATCA	3 cut(s)	79, 1314, 1564
BcnI	CCSGG	2 cut(s)	1801, 1904
BcoDI	GTCTC	3 cut(s)	306, 764, 1146
BfaI	CTAG	6 cut(s)	209, 594, 977, 1055, 1538, 1836
BfoI	RGCGCY	2 cut(s)	788, 1713
BfuI	GTATCC	1 cut(s)	2003
BisI	GCNGC	5 cut(s)	174, 715, 718, 1233, 1833
BlsI	GCNGC	5 cut(s)	175, 716, 719, 1234, 1834
BmcAI	AGTACT	2 cut(s)	881, 1179
Bme1390I	CCNGG	3 cut(s)	386, 1801, 1904
BmeT110I	CYCGRG	1 cut(s)	25
BmgBI	CACGTC	1 cut(s)	200
BmgT120I	GGNCC	1 cut(s)	396
BmiI	GGNNCC	1 cut(s)	666
BmrFI	CCNGG	3 cut(s)	386, 1801, 1904
BmrI	ACTGGG	1 cut(s)	238
BmsI	GCATC	7 cut(s)	208, 635, 951, 1048, 1152, 1413, 1722
BmtI	GCTAGC	1 cut(s)	1839
BmuI	ACTGGG	1 cut(s)	238
BpiI	GAAGAC	2 cut(s)	355, 734
BpmI	CTGGAG	1 cut(s)	1726
Bpu10I	CCTNAGC	1 cut(s)	1878
Bpu14I	TTCGAA	1 cut(s)	873
BpuMI	CCSGG	2 cut(s)	1801, 1904
BsaBI	GATNNNNATC	1 cut(s)	1062
BsaHI	GRCGYC	1 cut(s)	686
BsaJI	CCNNGG	4 cut(s)	384, 732, 1545, 1903
Bse1I	ACTGG	4 cut(s)	244, 1067, 1129, 2082
Bse3DI	GCAATG	1 cut(s)	101
Bse8I	GATNNNNATC	1 cut(s)	1062
BseBI	CCWGG	1 cut(s)	386
BseDI	CCNNGG	4 cut(s)	384, 732, 1545, 1903
BseGI	GGATG	8 cut(s)	41, 47, 257, 651, 1063, 1428, 1470, 1737
BseJI	GATNNNNATC	1 cut(s)	1062
BseMI	GCAATG	1 cut(s)	101
BseMII	CTCAG	3 cut(s)	621, 1887, 1962
BseNI	ACTGG	4 cut(s)	244, 1067, 1129, 2082
BseX3I	CGGCCG	1 cut(s)	715
BseXI	GCAGC	3 cut(s)	185, 1244, 1819
BseYI	CCCAGC	3 cut(s)	1050, 1532, 1640
BsgI	GTGCAG	1 cut(s)	1242
Bsh1285I	CGRYCG	1 cut(s)	718
BshFI	GGCC	4 cut(s)	398, 717, 1635, 1799
BsiEI	CGRYCG	1 cut(s)	718
BsiHKAI	GWGCWC	1 cut(s)	1608
BsiHKCI	CYCGRG	1 cut(s)	25
BsiSI	CCGG	3 cut(s)	91, 1800, 1903
BsmAI	GTCTC	3 cut(s)	306, 764, 1146
BsmI	GAATGC	3 cut(s)	283, 994, 1447
BsnI	GGCC	4 cut(s)	398, 717, 1635, 1799
BsoBI	CYCGRG	1 cut(s)	25
Bsp119I	TTCGAA	1 cut(s)	873
Bsp1286I	GDGCHC	1 cut(s)	1608
Bsp1407I	TGTACA	1 cut(s)	1323
Bsp143I	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
Bsp19I	CCATGG	1 cut(s)	732
BspACI	CCGC	5 cut(s)	150, 535, 714, 718, 1839
BspANI	GGCC	4 cut(s)	398, 717, 1635, 1799
BspCNI	CTCAG	3 cut(s)	622, 1886, 1961
BspLI	GGNNCC	1 cut(s)	666
BspOI	GCTAGC	1 cut(s)	1839
BspPI	GGATC	1 cut(s)	1877
BspQI	GCTCTTC	1 cut(s)	1719
BspT104I	TTCGAA	1 cut(s)	873
BsrDI	GCAATG	1 cut(s)	101
BsrGI	TGTACA	1 cut(s)	1323
BsrI	ACTGG	4 cut(s)	244, 1067, 1129, 2082
BssECI	CCNNGG	4 cut(s)	384, 732, 1545, 1903
BssMI	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
BssNI	GRCGYC	1 cut(s)	686
BssT1I	CCWWGG	1 cut(s)	732
Bst2UI	CCWGG	1 cut(s)	386
Bst4CI	ACNGT	3 cut(s)	116, 543, 1379
Bst6I	CTCTTC	3 cut(s)	384, 870, 1719
BstACI	GRCGYC	1 cut(s)	686
BstAUI	TGTACA	1 cut(s)	1323
BstBI	TTCGAA	1 cut(s)	873
BstC8I	GCNNGC	6 cut(s)	535, 789, 1615, 1837, 1968, 1972
BstDEI	CTNAG	6 cut(s)	287, 630, 1448, 1873, 1878, 1948
BstDSI	CCRYGG	1 cut(s)	732
BstF5I	GGATG	8 cut(s)	41, 47, 257, 651, 1063, 1428, 1470, 1737
BstH2I	RGCGCY	2 cut(s)	788, 1713
BstHHI	GCGC	2 cut(s)	787, 1712
BstKTI	GATC	6 cut(s)	36, 82, 999, 1317, 1567, 1872
BstMAI	GTCTC	3 cut(s)	306, 764, 1146
BstMBI	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
BstMCI	CGRYCG	1 cut(s)	718
BstMWI	GCNNNNNNNGC	5 cut(s)	170, 564, 809, 818, 1229
BstNI	CCWGG	1 cut(s)	386
BstNSI	RCATGY	5 cut(s)	268, 913, 1617, 1681, 1813
BstSCI	CCNGG	3 cut(s)	384, 1799, 1902
BstV1I	GCAGC	3 cut(s)	185, 1244, 1819
BstV2I	GAAGAC	2 cut(s)	355, 734
BstX2I	RGATCY	1 cut(s)	1869
BstYI	RGATCY	1 cut(s)	1869
BstZI	CGGCCG	1 cut(s)	715
BsuI	GTATCC	1 cut(s)	2003
BsuRI	GGCC	4 cut(s)	398, 717, 1635, 1799
BtgI	CCRYGG	1 cut(s)	732
BtgZI	GCGATG	1 cut(s)	1489
BtrI	CACGTC	1 cut(s)	200
BtsCI	GGATG	8 cut(s)	41, 47, 257, 651, 1063, 1428, 1470, 1737
BtsI	GCAGTG	1 cut(s)	727
BtsIMutI	CAGTG	3 cut(s)	112, 727, 1122
Cac8I	GCNNGC	6 cut(s)	535, 789, 1615, 1837, 1968, 1972
CciNI	GCGGCCGC	1 cut(s)	715
CfoI	GCGC	2 cut(s)	787, 1712
Cfr13I	GGNCC	1 cut(s)	396
Csp6I	GTAC	5 cut(s)	99, 880, 1178, 1324, 2036
CviQI	GTAC	5 cut(s)	99, 880, 1178, 1324, 2036
DdeI	CTNAG	6 cut(s)	287, 630, 1448, 1873, 1878, 1948
DpnI	GATC	6 cut(s)	35, 81, 998, 1316, 1566, 1871
DpnII	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
DrdI	GACNNNNNNGTC	1 cut(s)	685
DseDI	GACNNNNNNGTC	1 cut(s)	685
EaeI	YGGCCR	3 cut(s)	715, 1633, 1797
EagI	CGGCCG	1 cut(s)	715
Eam1104I	CTCTTC	3 cut(s)	384, 870, 1719
EarI	CTCTTC	3 cut(s)	384, 870, 1719
EclXI	CGGCCG	1 cut(s)	715
Eco130I	CCWWGG	1 cut(s)	732
Eco47III	AGCGCT	2 cut(s)	786, 1711
Eco52I	CGGCCG	1 cut(s)	715
Eco57I	CTGAAG	1 cut(s)	801
Eco88I	CYCGRG	1 cut(s)	25
EcoO109I	RGGNCCY	1 cut(s)	396
EcoRII	CCWGG	1 cut(s)	384
EcoT14I	CCWWGG	1 cut(s)	732
EcoT22I	ATGCAT	5 cut(s)	911, 943, 1428, 1615, 1619
ErhI	CCWWGG	1 cut(s)	732
FauI	CCCGC	3 cut(s)	143, 542, 1832
FauNDI	CATATG	1 cut(s)	1006
FbaI	TGATCA	3 cut(s)	79, 1314, 1564
Fnu4HI	GCNGC	5 cut(s)	174, 715, 718, 1233, 1833
FokI	GGATG	8 cut(s)	28, 34, 244, 658, 1050, 1435, 1477, 1744
Fsp4HI	GCNGC	5 cut(s)	174, 715, 718, 1233, 1833
FspBI	CTAG	6 cut(s)	209, 594, 977, 1055, 1538, 1836
GlaI	GCGC	2 cut(s)	786, 1711
GluI	GCNGC	5 cut(s)	174, 715, 718, 1233, 1833
GsaI	CCCAGC	3 cut(s)	1054, 1536, 1644
GsuI	CTGGAG	1 cut(s)	1726
HaeII	RGCGCY	2 cut(s)	788, 1713
HaeIII	GGCC	4 cut(s)	398, 717, 1635, 1799
HapII	CCGG	3 cut(s)	91, 1800, 1903
HhaI	GCGC	2 cut(s)	787, 1712
Hin1I	GRCGYC	1 cut(s)	686
Hin6I	GCGC	2 cut(s)	785, 1710
HinP1I	GCGC	2 cut(s)	785, 1710
HincII	GTYRAC	2 cut(s)	829, 1624
HindII	GTYRAC	2 cut(s)	829, 1624
HinfI	GANTC	8 cut(s)	180, 236, 844, 1013, 1431, 1479, 1853, 1918
HpaII	CCGG	3 cut(s)	91, 1800, 1903
HphI	GGTGA	3 cut(s)	74, 970, 1448
Hpy166II	GTNNAC	8 cut(s)	119, 127, 375, 829, 1122, 1324, 1326, 1624
Hpy188I	TCNGA	2 cut(s)	631, 1792
Hpy188III	TCNNGA	4 cut(s)	1145, 1471, 1705, 2057
Hpy8I	GTNNAC	8 cut(s)	119, 127, 375, 829, 1122, 1324, 1326, 1624
HpyAV	CCTTC	4 cut(s)	95, 1343, 1637, 1649
HpyCH4III	ACNGT	3 cut(s)	116, 543, 1379
HpyCH4IV	ACGT	2 cut(s)	199, 686
HpyF10VI	GCNNNNNNNGC	5 cut(s)	170, 564, 809, 818, 1229
HpyF3I	CTNAG	6 cut(s)	287, 630, 1448, 1873, 1878, 1948
HpySE526I	ACGT	2 cut(s)	199, 686
Hsp92I	GRCGYC	1 cut(s)	686
HspAI	GCGC	2 cut(s)	785, 1710
Ksp22I	TGATCA	3 cut(s)	79, 1314, 1564
Kzo9I	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
LguI	GCTCTTC	1 cut(s)	1719
LmnI	GCTCC	4 cut(s)	664, 1603, 1707, 1803
Lsp1109I	GCAGC	3 cut(s)	185, 1244, 1819
LweI	GCATC	7 cut(s)	208, 635, 951, 1048, 1152, 1413, 1722
MaeI	CTAG	6 cut(s)	209, 594, 977, 1055, 1538, 1836
MaeII	ACGT	2 cut(s)	199, 686
MaeIII	GTNAC	7 cut(s)	52, 139, 518, 676, 1192, 1495, 1540
MalI	GATC	6 cut(s)	35, 81, 998, 1316, 1566, 1871
MboI	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
MboII	GAAGA	7 cut(s)	360, 371, 739, 853, 887, 1706, 1769
MfeI	CAATTG	1 cut(s)	1186
MflI	RGATCY	1 cut(s)	1869
MhlI	GDGCHC	1 cut(s)	1608
MlyI	GAGTC	4 cut(s)	174, 230, 1425, 1847
MmeI	TCCRAC	5 cut(s)	285, 642, 965, 1073, 1282
Mph1103I	ATGCAT	5 cut(s)	911, 943, 1428, 1615, 1619
MroXI	GAANNNNTTC	2 cut(s)	1152, 2052
MseI	TTAA	7 cut(s)	186, 606, 639, 1239, 1892, 1926, 1982
MslI	CAYNNNNRTG	7 cut(s)	444, 477, 852, 904, 1263, 1682, 1814
MspI	CCGG	3 cut(s)	91, 1800, 1903
MspR9I	CCNGG	3 cut(s)	386, 1801, 1904
MunI	CAATTG	1 cut(s)	1186
Mva1269I	GAATGC	3 cut(s)	283, 994, 1447
MvaI	CCWGG	1 cut(s)	386
MwoI	GCNNNNNNNGC	5 cut(s)	170, 564, 809, 818, 1229
NciI	CCSGG	2 cut(s)	1801, 1904
NcoI	CCATGG	1 cut(s)	732
NdeI	CATATG	1 cut(s)	1006
NdeII	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
NheI	GCTAGC	1 cut(s)	1835
NlaIV	GGNNCC	1 cut(s)	666
NmeAIII	GCCGAG	1 cut(s)	1835
NmuCI	GTSAC	2 cut(s)	676, 1192
NotI	GCGGCCGC	1 cut(s)	715
NsiI	ATGCAT	5 cut(s)	911, 943, 1428, 1615, 1619
NspI	RCATGY	5 cut(s)	268, 913, 1617, 1681, 1813
NspV	TTCGAA	1 cut(s)	873
PaeI	GCATGC	1 cut(s)	1617
PciI	ACATGT	1 cut(s)	1809
PciSI	GCTCTTC	1 cut(s)	1719
PctI	GAATGC	3 cut(s)	283, 994, 1447
PdmI	GAANNNNTTC	2 cut(s)	1152, 2052
PfeI	GAWTC	4 cut(s)	844, 1013, 1479, 1918
PkrI	GCNGC	5 cut(s)	175, 716, 719, 1234, 1834
PleI	GAGTC	4 cut(s)	174, 230, 1425, 1847
PpsI	GAGTC	4 cut(s)	174, 230, 1425, 1847
PscI	ACATGT	1 cut(s)	1809
PshBI	ATTAAT	2 cut(s)	186, 1239
Psp6I	CCWGG	1 cut(s)	384
PspFI	CCCAGC	3 cut(s)	1050, 1532, 1640
PspGI	CCWGG	1 cut(s)	384
PspN4I	GGNNCC	1 cut(s)	666
PspPI	GGNCC	1 cut(s)	396
PsuI	RGATCY	1 cut(s)	1869
RsaI	GTAC	5 cut(s)	100, 881, 1179, 1325, 2037
RsaNI	GTAC	5 cut(s)	99, 880, 1178, 1324, 2036
RseI	CAYNNNNRTG	7 cut(s)	444, 477, 852, 904, 1263, 1682, 1814
SapI	GCTCTTC	1 cut(s)	1719
SaqAI	TTAA	7 cut(s)	186, 606, 639, 1239, 1892, 1926, 1982
SatI	GCNGC	5 cut(s)	174, 715, 718, 1233, 1833
Sau3AI	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
Sau96I	GGNCC	1 cut(s)	396
ScaI	AGTACT	2 cut(s)	881, 1179
SchI	GAGTC	4 cut(s)	174, 230, 1425, 1847
ScrFI	CCNGG	3 cut(s)	386, 1801, 1904
SduI	GDGCHC	1 cut(s)	1608
SfaNI	GCATC	7 cut(s)	208, 635, 951, 1048, 1152, 1413, 1722
SfuI	TTCGAA	1 cut(s)	873
SmiMI	CAYNNNNRTG	7 cut(s)	444, 477, 852, 904, 1263, 1682, 1814
SphI	GCATGC	1 cut(s)	1617
SsiI	CCGC	5 cut(s)	150, 535, 714, 718, 1839
SspI	AATATT	4 cut(s)	1044, 1372, 1825, 2065
SspMI	CTAG	6 cut(s)	209, 594, 977, 1055, 1538, 1836
StyD4I	CCNGG	3 cut(s)	384, 1799, 1902
StyI	CCWWGG	1 cut(s)	732
TaaI	ACNGT	3 cut(s)	116, 543, 1379
TaiI	ACGT	2 cut(s)	202, 689
TaqI	TCGA	1 cut(s)	873
TatI	WGTACW	3 cut(s)	879, 1177, 1323
TauI	GCSGC	2 cut(s)	717, 720
TfiI	GAWTC	4 cut(s)	844, 1013, 1479, 1918
Tru1I	TTAA	7 cut(s)	186, 606, 639, 1239, 1892, 1926, 1982
Tru9I	TTAA	7 cut(s)	186, 606, 639, 1239, 1892, 1926, 1982
TscAI	CASTG	3 cut(s)	119, 727, 1129
TseFI	GTSAC	2 cut(s)	676, 1192
TseI	GCWGC	3 cut(s)	173, 1232, 1832
Tsp45I	GTSAC	2 cut(s)	676, 1192
TspDTI	ATGAA	9 cut(s)	17, 330, 836, 1247, 1448, 1492, 1700, 1799, 1976
TspGWI	ACGGA	1 cut(s)	40
TspRI	CASTG	3 cut(s)	119, 727, 1129
VspI	ATTAAT	2 cut(s)	186, 1239
XapI	RAATTY	3 cut(s)	70, 1254, 1452
XceI	RCATGY	5 cut(s)	268, 913, 1617, 1681, 1813
XmnI	GAANNNNTTC	2 cut(s)	1152, 2052
XspI	CTAG	6 cut(s)	209, 594, 977, 1055, 1538, 1836
ZraI	GACGTC	1 cut(s)	687
ZrmI	AGTACT	2 cut(s)	881, 1179
Zsp2I	ATGCAT	5 cut(s)	911, 943, 1428, 1615, 1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.