Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0014597

Physical Location & Seq

Genomic Coordinates Forward (+)

65516662 .. 65518746

Gene Structure 2085 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG452100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGAATACATATCGTCATATTCACCCGGGCCAGATCATATCACCCCCATCCGCTACTACCCAAATTGTAAATTTCTTTGATCACCTTCTCCGGCAATGTACTCTACCTGAACACTGTAAACAAGTTCACACTCAAATTGTTACGATGGGCGGGTGTCAATCAGCATTCCTGGCTGCCCGACTCGTGAATGTTTATGGTCGTCTTGGGCTTGTTGTTGATGCCCAGAAAGTTTTTGACATCACCCCGTTTCAAGGTACATCAAACATGCTCTTGTGGAATTCAATTCTTAGAGCAAATGTGTCTCATGGGTTTTATGAAAAAGCACTCAAACTGTATGATAAAATGCGAAGACTTGGAGTTTGGGCTGATGGGTTTACTCTTCCCCTGGTTATTAGGGCCTGTGCATTTATGGGTAGATGTAGGCTATGCAAGAATGTGCATGGTCATGTTTTACAAATGGGTTTTCAAAATCATCTCCATGTTGTCAATGAGTTGATGGGAATGTATGGGAAACTTGGTAACATGGACTATGCCCGCCAACTGTTTGATAAAATGAGCGTGAGAAGCTATGTTTCTTGGAATACTCTGGTTTCTAGCTATGCCTTTAACTATGATTGTGATGGTGCGTCTGAGATTTTTAATAGGATGGAGTTAGATGGGTTGGAGCCAAACCCTGTGACTTGGACATCATTATTGTCAAGTCATGCTCGTTGTGGCCGCAGTGAGAAGACCATGGAGTTGTTTGGTATGATGAGGGTTAGAGGAATTGAGACAACTGCTGAAGCGCTTGCTGTGGTGTTATCTGTATGTGCTGATGTGGCTGTGGTTGACAAGGGTAAGAAGATTCATGGATATGTTGTTAGAGGTGGTTTCGAAGAGTACTTGTTTGTGAAAAATTCACTAATATGCATGTATGGAAAATGTGGAGATGTAGAAAATGCATACAAGTTATTTTTGGTGATGGAAAGCAAAAACCTAGTGAGTTGGAATGCTTTGATCTCATCATATGCTGAATCTGGTTTGTGTGATGAGGCTTTTGCAATATTTTCCCAGCTAGATGCTCATCCAGTTATGACACCTAATATCATAAGTTGGAGTGCTGTTATTCAAGGGTTCTCGTCCACTGGACAAGGAGAGAAGTCTCTGGAACTCTTTCGGCAGATGCAGAGAGCAGGAGTACTGCCCAATTGTGTCACTATATCCAGCGTATTATCTGTTTGTGCAGAATTAGCAGCAATTAATCTTGGCAGGGAAATTCATGGTCATGTGGTAAGGGCTTTGATGGATAGCAACATTTTGGTTGGAAATGGCTTGATCAATATGTATACAAAATGTGGAGGTTTTGAGGAAGGGCATAGAGTATTTGAAAATATTGACAGTAAGGACTTGATTTCATGGAACACAATGATTGCTGGTTATGGGATGCATGGACTCGGTGAGAATGCTCTAAGAATTTTTCATAGGATGGTCAAGACGGGATTCAAGCCAGACAATGTAACATTCATCGCAGTTCTTTCTGCTTGTAGTCATGCTGGGCTAGTTACCGAGGGTCGCCTCCTTTTTGATCAAATGATTGGAGTTTATGGTGTAAAACCCCAAATGGAGCACTATGCATGCATGGTTGACCTTCTTGGCCGTGCGGGGTTATTGCAAGAAGGAAGCAACATTGTGAAAAACATGCCAATGAAACCCAATGCTTGTGTCTGGAGCGCTCTTCTCAACTCTTGTAGGATGCACAAAAATACAGATATTGCAGAAGAAACTGCCACCCATATATTCAATATGAACTCGGAAATGGCCGGGAGCTACATGTTGATGTCAAATATTTATGCTGCTAGCGGGAGATGGGAGGACTCGGCAAAAGTGAGGATCTCAGCGAAGGCAAAGGGTTTAAGGAAAATCCGGGGGCAAAGCTGGATTCAGGTTAAGAATAAGATTTTTATATTCTCAGCAGGGAATACCATGCAAGCAGGCTTGGAGTTAATTCATGGTATCCTTTATGACTTGGCACTTCAAATGGAAAGTGAGGGATATGTACCTAATAAGGAAGTCATTCAAGAGAATATTGACAAAGAACTGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0023052 GO:0031930 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

694

Amino Acids

77.24

Weight (kDa)

7.81

Isoelectric Point (pI)

42.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	92 - 120	6.7e-06	PPR repeat
PPR_2	PF13041	190 - 236	9.9e-08	PPR repeat family
PPR	PF01535	226 - 256	4.4e-06	PPR repeat
PPR_2	PF13041	360 - 408	6.1e-10	PPR repeat family
PPR	PF01535	363 - 393	7.5e-06	PPR repeat
PPR_2	PF13041	462 - 509	1.7e-11	PPR repeat family
PPR	PF01535	464 - 493	4.1e-07	PPR repeat
E_motif	PF20431	579 - 641	3.2e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014597)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17630 AT1G17630
fragaria_vesca	FvH4_6g33510
malus_domestica	MD17G1187400.v1.1
prunus_persica	Prupe.3G049200_v2.0.a1
pyrus_communis	pycom17g19640
rosa_laevigata	RLG00000020033
rosa_multiflora	Rmu_co8432359.1_g000001 Rmu_sc0003507.1_g000019 Rmu_sc0024801.1_g000002
rosa_roxburghii	Rroxscaffold_2G00101870 Rroxscaffold_2G00101920
rosa_rugosa	Rorug02G0380900
rosa_samantha	Rh2AG434000 Rh2CG419700 Rh2DG452100
rosa_wichuraiana	Rw2G035380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1325
AciI	CCGC	6 cut(s)	51, 150, 535, 718, 1640, 1839
AclWI	GGATC	1 cut(s)	1877
AcoI	YGGCCR	3 cut(s)	715, 1633, 1797
AcsI	RAATTY	5 cut(s)	70, 277, 895, 1254, 1452
AcuI	CTGAAG	1 cut(s)	801
AfaI	GTAC	5 cut(s)	100, 256, 881, 1179, 2037
AfeI	AGCGCT	2 cut(s)	786, 1711
AfiI	CCNNNNNNNGG	1 cut(s)	251
AflIII	ACRYGT	1 cut(s)	1809
AgsI	TTSAA	9 cut(s)	251, 282, 467, 1109, 1367, 1483, 1780, 2015, 2057
AjnI	CCWGG	2 cut(s)	168, 384
AluBI	AGCT	5 cut(s)	567, 597, 1054, 1806, 1914
AluI	AGCT	5 cut(s)	567, 597, 1054, 1806, 1914
Alw21I	GWGCWC	1 cut(s)	1608
Alw26I	GTCTC	3 cut(s)	306, 764, 1146
AlwI	GGATC	1 cut(s)	1877
Ama87I	CYCGRG	1 cut(s)	25
Aor51HI	AGCGCT	2 cut(s)	786, 1711
AoxI	GGCC	5 cut(s)	28, 396, 715, 1633, 1797
ApeKI	GCWGC	3 cut(s)	173, 1232, 1832
ApoI	RAATTY	5 cut(s)	70, 277, 895, 1254, 1452
ArsI	GACNNNNNNTTYG	2 cut(s)	342, 374
AseI	ATTAAT	1 cut(s)	1239
Asp700I	GAANNNNTTC	2 cut(s)	1152, 2052
AspLEI	GCGC	2 cut(s)	787, 1712
AspS9I	GGNCC	2 cut(s)	28, 396
AsuC2I	CCSGG	4 cut(s)	26, 27, 1801, 1904
AsuHPI	GGTGA	6 cut(s)	14, 33, 74, 232, 970, 1448
AsuII	TTCGAA	1 cut(s)	873
AsuNHI	GCTAGC	1 cut(s)	1835
AvaI	CYCGRG	1 cut(s)	25
BauI	CACGAG	1 cut(s)	182
BbsI	GAAGAC	2 cut(s)	355, 734
Bbv12I	GWGCWC	1 cut(s)	1608
BbvI	GCAGC	3 cut(s)	160, 1244, 1819
BceAI	ACGGC	1 cut(s)	1620
BciT130I	CCWGG	2 cut(s)	170, 386
BciVI	GTATCC	1 cut(s)	2003
BclI	TGATCA	3 cut(s)	79, 1314, 1564
BcnI	CCSGG	4 cut(s)	26, 27, 1801, 1904
BcoDI	GTCTC	3 cut(s)	306, 764, 1146
BfaI	CTAG	5 cut(s)	594, 977, 1055, 1538, 1836
BfoI	RGCGCY	2 cut(s)	788, 1713
BfuI	GTATCC	1 cut(s)	2003
BisI	GCNGC	4 cut(s)	174, 718, 1233, 1833
BlsI	GCNGC	4 cut(s)	175, 719, 1234, 1834
BmcAI	AGTACT	2 cut(s)	881, 1179
Bme1390I	CCNGG	6 cut(s)	26, 27, 170, 386, 1801, 1904
BmeT110I	CYCGRG	1 cut(s)	25
BmgT120I	GGNCC	2 cut(s)	28, 396
BmiI	GGNNCC	1 cut(s)	666
BmrFI	CCNGG	6 cut(s)	26, 27, 170, 386, 1801, 1904
BmsI	GCATC	5 cut(s)	208, 1048, 1152, 1413, 1722
BmtI	GCTAGC	1 cut(s)	1839
BpiI	GAAGAC	2 cut(s)	355, 734
BpmI	CTGGAG	1 cut(s)	1726
Bpu14I	TTCGAA	1 cut(s)	873
BpuMI	CCSGG	4 cut(s)	26, 27, 1801, 1904
BsaBI	GATNNNNATC	1 cut(s)	1062
BsaJI	CCNNGG	5 cut(s)	25, 384, 732, 1545, 1903
Bsc4I	CCNNNNNNNGG	1 cut(s)	251
Bse1I	ACTGG	3 cut(s)	1067, 1129, 2082
Bse3DI	GCAATG	1 cut(s)	101
Bse8I	GATNNNNATC	1 cut(s)	1062
BseBI	CCWGG	2 cut(s)	170, 386
BseDI	CCNNGG	5 cut(s)	25, 384, 732, 1545, 1903
BseGI	GGATG	6 cut(s)	47, 651, 1063, 1428, 1470, 1737
BseJI	GATNNNNATC	1 cut(s)	1062
BseLI	CCNNNNNNNGG	1 cut(s)	251
BseMI	GCAATG	1 cut(s)	101
BseMII	CTCAG	3 cut(s)	621, 1887, 1962
BseNI	ACTGG	3 cut(s)	1067, 1129, 2082
BseXI	GCAGC	3 cut(s)	160, 1244, 1819
BseYI	CCCAGC	2 cut(s)	1050, 1532
BsgI	GTGCAG	1 cut(s)	1242
BshFI	GGCC	5 cut(s)	30, 398, 717, 1635, 1799
BsiHKAI	GWGCWC	1 cut(s)	1608
BsiHKCI	CYCGRG	1 cut(s)	25
BsiSI	CCGG	4 cut(s)	26, 91, 1800, 1903
BslI	CCNNNNNNNGG	1 cut(s)	251
BsmAI	GTCTC	3 cut(s)	306, 764, 1146
BsmI	GAATGC	3 cut(s)	164, 994, 1447
BsnI	GGCC	5 cut(s)	30, 398, 717, 1635, 1799
BsoBI	CYCGRG	1 cut(s)	25
Bsp119I	TTCGAA	1 cut(s)	873
Bsp1286I	GDGCHC	1 cut(s)	1608
Bsp143I	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
Bsp19I	CCATGG	1 cut(s)	732
BspACI	CCGC	6 cut(s)	51, 150, 535, 718, 1640, 1839
BspANI	GGCC	5 cut(s)	30, 398, 717, 1635, 1799
BspCNI	CTCAG	3 cut(s)	622, 1886, 1961
BspLI	GGNNCC	1 cut(s)	666
BspOI	GCTAGC	1 cut(s)	1839
BspPI	GGATC	1 cut(s)	1877
BspQI	GCTCTTC	1 cut(s)	1719
BspT104I	TTCGAA	1 cut(s)	873
BsrDI	GCAATG	1 cut(s)	101
BsrI	ACTGG	3 cut(s)	1067, 1129, 2082
BssECI	CCNNGG	5 cut(s)	25, 384, 732, 1545, 1903
BssMI	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
BssNAI	GTATAC	1 cut(s)	1326
BssSI	CACGAG	1 cut(s)	182
BssT1I	CCWWGG	1 cut(s)	732
Bst1107I	GTATAC	1 cut(s)	1326
Bst2BI	CACGAG	1 cut(s)	182
Bst2UI	CCWGG	2 cut(s)	170, 386
Bst4CI	ACNGT	4 cut(s)	116, 333, 543, 1379
Bst6I	CTCTTC	3 cut(s)	384, 870, 1719
BstBI	TTCGAA	1 cut(s)	873
BstC8I	GCNNGC	6 cut(s)	535, 789, 1615, 1837, 1968, 1972
BstDEI	CTNAG	5 cut(s)	287, 630, 1448, 1873, 1948
BstDSI	CCRYGG	1 cut(s)	732
BstF5I	GGATG	6 cut(s)	47, 651, 1063, 1428, 1470, 1737
BstH2I	RGCGCY	2 cut(s)	788, 1713
BstHHI	GCGC	2 cut(s)	787, 1712
BstKTI	GATC	6 cut(s)	36, 82, 999, 1317, 1567, 1872
BstMAI	GTCTC	3 cut(s)	306, 764, 1146
BstMBI	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
BstMWI	GCNNNNNNNGC	4 cut(s)	170, 564, 818, 1229
BstNI	CCWGG	2 cut(s)	170, 386
BstNSI	RCATGY	5 cut(s)	268, 913, 1617, 1681, 1813
BstSCI	CCNGG	6 cut(s)	24, 25, 168, 384, 1799, 1902
BstV1I	GCAGC	3 cut(s)	160, 1244, 1819
BstV2I	GAAGAC	2 cut(s)	355, 734
BstX2I	RGATCY	1 cut(s)	1869
BstYI	RGATCY	1 cut(s)	1869
BstZ17I	GTATAC	1 cut(s)	1326
BsuI	GTATCC	1 cut(s)	2003
BsuRI	GGCC	5 cut(s)	30, 398, 717, 1635, 1799
BtgI	CCRYGG	1 cut(s)	732
BtgZI	GCGATG	1 cut(s)	1489
BtsCI	GGATG	6 cut(s)	47, 651, 1063, 1428, 1470, 1737
BtsI	GCAGTG	1 cut(s)	727
BtsIMutI	CAGTG	3 cut(s)	112, 727, 1122
Cac8I	GCNNGC	6 cut(s)	535, 789, 1615, 1837, 1968, 1972
CfoI	GCGC	2 cut(s)	787, 1712
Cfr13I	GGNCC	2 cut(s)	28, 396
Cfr9I	CCCGGG	1 cut(s)	25
CseI	GACGC	1 cut(s)	615
Csp6I	GTAC	5 cut(s)	99, 255, 880, 1178, 2036
CviQI	GTAC	5 cut(s)	99, 255, 880, 1178, 2036
DdeI	CTNAG	5 cut(s)	287, 630, 1448, 1873, 1948
DpnI	GATC	6 cut(s)	35, 81, 998, 1316, 1566, 1871
DpnII	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
EaeI	YGGCCR	3 cut(s)	715, 1633, 1797
Eam1104I	CTCTTC	3 cut(s)	384, 870, 1719
EarI	CTCTTC	3 cut(s)	384, 870, 1719
Eco130I	CCWWGG	1 cut(s)	732
Eco47III	AGCGCT	2 cut(s)	786, 1711
Eco57I	CTGAAG	1 cut(s)	801
Eco88I	CYCGRG	1 cut(s)	25
EcoO109I	RGGNCCY	1 cut(s)	396
EcoRI	GAATTC	1 cut(s)	277
EcoRII	CCWGG	2 cut(s)	168, 384
EcoT14I	CCWWGG	1 cut(s)	732
EcoT22I	ATGCAT	5 cut(s)	911, 943, 1428, 1615, 1619
ErhI	CCWWGG	1 cut(s)	732
FauI	CCCGC	4 cut(s)	143, 542, 1633, 1832
FauNDI	CATATG	1 cut(s)	1006
FbaI	TGATCA	3 cut(s)	79, 1314, 1564
FblI	GTMKAC	1 cut(s)	1325
Fnu4HI	GCNGC	4 cut(s)	174, 718, 1233, 1833
FokI	GGATG	6 cut(s)	34, 658, 1050, 1435, 1477, 1744
Fsp4HI	GCNGC	4 cut(s)	174, 718, 1233, 1833
FspBI	CTAG	5 cut(s)	594, 977, 1055, 1538, 1836
GlaI	GCGC	2 cut(s)	786, 1711
GluI	GCNGC	4 cut(s)	174, 718, 1233, 1833
GsaI	CCCAGC	2 cut(s)	1054, 1536
GsuI	CTGGAG	1 cut(s)	1726
HaeII	RGCGCY	2 cut(s)	788, 1713
HaeIII	GGCC	5 cut(s)	30, 398, 717, 1635, 1799
HapII	CCGG	4 cut(s)	26, 91, 1800, 1903
HgaI	GACGC	1 cut(s)	615
HhaI	GCGC	2 cut(s)	787, 1712
Hin6I	GCGC	2 cut(s)	785, 1710
HinP1I	GCGC	2 cut(s)	785, 1710
HincII	GTYRAC	2 cut(s)	829, 1624
HindII	GTYRAC	2 cut(s)	829, 1624
HinfI	GANTC	7 cut(s)	180, 844, 1013, 1431, 1479, 1853, 1918
HpaII	CCGG	4 cut(s)	26, 91, 1800, 1903
HphI	GGTGA	6 cut(s)	14, 33, 74, 232, 970, 1448
Hpy166II	GTNNAC	7 cut(s)	119, 127, 375, 829, 1122, 1326, 1624
Hpy188I	TCNGA	2 cut(s)	631, 1792
Hpy188III	TCNNGA	5 cut(s)	184, 1145, 1471, 1705, 2057
Hpy8I	GTNNAC	7 cut(s)	119, 127, 375, 829, 1122, 1326, 1624
HpyAV	CCTTC	5 cut(s)	95, 1343, 1637, 1649, 1873
HpyCH4III	ACNGT	4 cut(s)	116, 333, 543, 1379
HpyF10VI	GCNNNNNNNGC	4 cut(s)	170, 564, 818, 1229
HpyF3I	CTNAG	5 cut(s)	287, 630, 1448, 1873, 1948
HspAI	GCGC	2 cut(s)	785, 1710
Ksp22I	TGATCA	3 cut(s)	79, 1314, 1564
Kzo9I	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
LguI	GCTCTTC	1 cut(s)	1719
LmnI	GCTCC	4 cut(s)	664, 1603, 1707, 1803
Lsp1109I	GCAGC	3 cut(s)	160, 1244, 1819
LweI	GCATC	5 cut(s)	208, 1048, 1152, 1413, 1722
MaeI	CTAG	5 cut(s)	594, 977, 1055, 1538, 1836
MaeIII	GTNAC	6 cut(s)	139, 518, 676, 1192, 1495, 1540
MalI	GATC	6 cut(s)	35, 81, 998, 1316, 1566, 1871
MboI	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
MboII	GAAGA	7 cut(s)	360, 371, 739, 853, 887, 1706, 1769
MfeI	CAATTG	1 cut(s)	1186
MflI	RGATCY	1 cut(s)	1869
MhlI	GDGCHC	1 cut(s)	1608
MlyI	GAGTC	3 cut(s)	174, 1425, 1847
MmeI	TCCRAC	4 cut(s)	642, 965, 1073, 1282
Mph1103I	ATGCAT	5 cut(s)	911, 943, 1428, 1615, 1619
MroXI	GAANNNNTTC	2 cut(s)	1152, 2052
MseI	TTAA	6 cut(s)	606, 639, 1239, 1892, 1926, 1982
MslI	CAYNNNNRTG	7 cut(s)	444, 477, 852, 904, 1263, 1682, 1814
MspI	CCGG	4 cut(s)	26, 91, 1800, 1903
MspR9I	CCNGG	6 cut(s)	26, 27, 170, 386, 1801, 1904
MunI	CAATTG	1 cut(s)	1186
Mva1269I	GAATGC	3 cut(s)	164, 994, 1447
MvaI	CCWGG	2 cut(s)	170, 386
MwoI	GCNNNNNNNGC	4 cut(s)	170, 564, 818, 1229
NciI	CCSGG	4 cut(s)	26, 27, 1801, 1904
NcoI	CCATGG	1 cut(s)	732
NdeI	CATATG	1 cut(s)	1006
NdeII	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
NheI	GCTAGC	1 cut(s)	1835
NlaIV	GGNNCC	1 cut(s)	666
NmeAIII	GCCGAG	1 cut(s)	1835
NmuCI	GTSAC	2 cut(s)	676, 1192
NsiI	ATGCAT	5 cut(s)	911, 943, 1428, 1615, 1619
NspI	RCATGY	5 cut(s)	268, 913, 1617, 1681, 1813
NspV	TTCGAA	1 cut(s)	873
PaeI	GCATGC	1 cut(s)	1617
PciI	ACATGT	1 cut(s)	1809
PciSI	GCTCTTC	1 cut(s)	1719
PctI	GAATGC	3 cut(s)	164, 994, 1447
PdmI	GAANNNNTTC	2 cut(s)	1152, 2052
PfeI	GAWTC	4 cut(s)	844, 1013, 1479, 1918
PkrI	GCNGC	4 cut(s)	175, 719, 1234, 1834
PleI	GAGTC	3 cut(s)	174, 1425, 1847
PpsI	GAGTC	3 cut(s)	174, 1425, 1847
PscI	ACATGT	1 cut(s)	1809
PshBI	ATTAAT	1 cut(s)	1239
Psp6I	CCWGG	2 cut(s)	168, 384
PspFI	CCCAGC	2 cut(s)	1050, 1532
PspGI	CCWGG	2 cut(s)	168, 384
PspN4I	GGNNCC	1 cut(s)	666
PspPI	GGNCC	2 cut(s)	28, 396
PsuI	RGATCY	1 cut(s)	1869
RsaI	GTAC	5 cut(s)	100, 256, 881, 1179, 2037
RsaNI	GTAC	5 cut(s)	99, 255, 880, 1178, 2036
RseI	CAYNNNNRTG	7 cut(s)	444, 477, 852, 904, 1263, 1682, 1814
SapI	GCTCTTC	1 cut(s)	1719
SaqAI	TTAA	6 cut(s)	606, 639, 1239, 1892, 1926, 1982
SatI	GCNGC	4 cut(s)	174, 718, 1233, 1833
Sau3AI	GATC	6 cut(s)	33, 79, 996, 1314, 1564, 1869
Sau96I	GGNCC	2 cut(s)	28, 396
ScaI	AGTACT	2 cut(s)	881, 1179
SchI	GAGTC	3 cut(s)	174, 1425, 1847
ScrFI	CCNGG	6 cut(s)	26, 27, 170, 386, 1801, 1904
SduI	GDGCHC	1 cut(s)	1608
SfaNI	GCATC	5 cut(s)	208, 1048, 1152, 1413, 1722
SfuI	TTCGAA	1 cut(s)	873
SmaI	CCCGGG	1 cut(s)	27
SmiMI	CAYNNNNRTG	7 cut(s)	444, 477, 852, 904, 1263, 1682, 1814
SphI	GCATGC	1 cut(s)	1617
SsiI	CCGC	6 cut(s)	51, 150, 535, 718, 1640, 1839
SspI	AATATT	4 cut(s)	1044, 1372, 1825, 2065
SspMI	CTAG	5 cut(s)	594, 977, 1055, 1538, 1836
StyD4I	CCNGG	6 cut(s)	24, 25, 168, 384, 1799, 1902
StyI	CCWWGG	1 cut(s)	732
TaaI	ACNGT	4 cut(s)	116, 333, 543, 1379
TaqI	TCGA	1 cut(s)	873
TatI	WGTACW	3 cut(s)	98, 879, 1177
TauI	GCSGC	1 cut(s)	720
TfiI	GAWTC	4 cut(s)	844, 1013, 1479, 1918
Tru1I	TTAA	6 cut(s)	606, 639, 1239, 1892, 1926, 1982
Tru9I	TTAA	6 cut(s)	606, 639, 1239, 1892, 1926, 1982
TscAI	CASTG	3 cut(s)	119, 727, 1129
TseFI	GTSAC	2 cut(s)	676, 1192
TseI	GCWGC	3 cut(s)	173, 1232, 1832
Tsp45I	GTSAC	2 cut(s)	676, 1192
TspMI	CCCGGG	1 cut(s)	25
TspRI	CASTG	3 cut(s)	119, 727, 1129
VspI	ATTAAT	1 cut(s)	1239
XapI	RAATTY	5 cut(s)	70, 277, 895, 1254, 1452
XceI	RCATGY	5 cut(s)	268, 913, 1617, 1681, 1813
XmaI	CCCGGG	1 cut(s)	25
XmiI	GTMKAC	1 cut(s)	1325
XmnI	GAANNNNTTC	2 cut(s)	1152, 2052
XspI	CTAG	5 cut(s)	594, 977, 1055, 1538, 1836
ZrmI	AGTACT	2 cut(s)	881, 1179
Zsp2I	ATGCAT	5 cut(s)	911, 943, 1428, 1615, 1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.