Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0014597

Physical Location & Seq

Genomic Coordinates Reverse (-)

23876569 .. 23883071

Gene Structure 6503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00101920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGAATACATATCGTCATGTTCACCTGGGCCAGATCATATCATCCCCATCTACCCAAATTGTAAATTTCTTTGATCACCTTCTCCGGCAATGTACTCTACCTGGACACTGTAAACAAGTTCACACTCAAATTCTTACGACAGGCATGTGTCAATCAGCGTTCTTGGCAGCCCGACTCATTAATGTTTATGCACGTCTTGGGCTAGTTGTTGATGCCCAGAAAGTTTTTGACTCCACCCAGTTTCAAGGTACATCCAACATGCTCTTGTGGAATGCAGTTCTTAGAGCGAATGTGTCTCATGGATTTTATGAAAAAGCACTTAAAATATATGATAAAATGCGAAGACTTGGAGTTTGGGCTGATGGGTTTACTCTTCCCCTGGTTATTAGGGCCTGTACATTTATGGGTAGATTTAGGCTATGCAAGAATGTGCATAGTCATGTTTTACAAATGGGTTTTCAAAATCATCTCCATGTTGTCAATGAGTTGATGGGAATGTATGGGAAACTTGGTAACATGGACTATGCCCGCCAACTGTTTGATAAAATGAGCGTGAGAAGCTATGTTTCTTGGAATACTCTGGTTTCTAGCTATGCCTTTAACTATGATTGTGATGGTGCATCTGAGATTTTTAATAGGATGGAGTTAGATGGGTTGGAGCCAAACCCTGTGACTTGGACATCATTATTGTCAAGTCATGCTCGTTGTGGCCGCAATGAGAAGACCATGGAGTTGTTTGGTATGATGAGGGTTAGAGGAATTGAGACAACTGCTGAAGCGCTTGCTGTGGTGTTATCTGTATGTGCTGATGTGGCTGTGGTCGACAAGGGTAAGAAGATTCATGGATATGTTGTTAGAGGTGGTTTCGAAGAGTACTTGTTTGTGAAAAATGCACTAATATGCATGTATGGAAAATGTGGAGACGTAGAAAATGCATACAAATTATTTTTGGTGATGGAAAGCAAAAACCTAGTGAGTTGGAATGCTTTGATCTCATCATATGCTGAATCTGGTTTGTGTGATGAGGCTTTTGCAATATTTTCCCAGCTAGATGCTCATCCAGTTATAACACCTAATATCATAAGTTGGAGTGCTGTTATTCAAGGGTTCTCGTCCACTGGACAAGGAGAGAAGTCTCTGGAACTCTTTCGGCAGATGCAGAGAGCAGGAGTATTGCCCAATTGTGTCACTATATCCAGCGTATTATCTGTTTGTGCAGAATTAGCAGCAATTAATCTTGGCAGGGAAATTCACGGTCATGTGGTAAGGGCTTTGATGGATAGCAACATTTTGGTTGGAAATGGCTTGATCAATATGTACACAAAATGTGGAAGTGTTGAGGAAGGGCATAGAGTATTTGAGAATATTGACAGTCAGGACTTGATTTCGTGGAACACAATGATTGCTGGTTATGGGATGCATGGACTCGGTGAGAATGCTCTAAGAATTTTTCATAGGATGGTCAAGATGGGATTCAAGCCAGACAATGTAACATTCATCGCTGTTCTTTCTGCTTGTAGTCATGCTGGGCTAGTTACTGAGGGTCGCCTCCTTTTTGATCAAATGATTGGAGTTTATGGTGTAAAACCCCAAATGGAGCACTATGCATGCATGGTTGATCTTCTTGGCCGTGCGGGGTTATTGCAAGAAGGAAGCAACATTGTGAAAAACATGCCAATGAAACCCAATGCTTGTGTCTGGAGCGCTCTTCTCAACTCTTGCAGGATGCACAAAAATACAGATATTGCAGAAGAAACTGCCACCCATATATTCAATATGAACTCGGAAATGGCCGGGAGCTACATGTTGATGTCAAATATTTATGCTGCTAGCGGGAGATGGGAGGACTCGGCAAAAGTGAGGATCTCAGCAAAGGCAAAGGGTTTAAGGAAAATCCGGGGGCAAAGCTGGATTCAGGTTAAGAATAAGGTTTTCATATTCTCAGCAGGGAATACCATGCAAGCAGGCTTGGAGTTAATTCATGGTATCCTTTATGACTTGGCACTTCAAATGGAAAGTGAGGGATATGTACCTAATAAGGAAGTCATTCAAGAGAATATTGACAAAGAACTGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0023052 GO:0031930 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

692

Amino Acids

77.14

Weight (kDa)

7.82

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	188 - 234	9.9e-08	PPR repeat family
PPR_2	PF13041	358 - 406	6.1e-10	PPR repeat family
PPR	PF01535	361 - 391	7.4e-06	PPR repeat
PPR_2	PF13041	460 - 507	1.4e-11	PPR repeat family
PPR	PF01535	462 - 492	6.6e-08	PPR repeat
E_motif	PF20431	577 - 639	3.1e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014597)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17630 AT1G17630
fragaria_vesca	FvH4_6g33510
malus_domestica	MD17G1187400.v1.1
prunus_persica	Prupe.3G049200_v2.0.a1
pyrus_communis	pycom17g19640
rosa_laevigata	RLG00000020033
rosa_multiflora	Rmu_co8432359.1_g000001 Rmu_sc0003507.1_g000019 Rmu_sc0024801.1_g000002
rosa_roxburghii	Rroxscaffold_2G00101870 Rroxscaffold_2G00101920
rosa_rugosa	Rorug02G0380900
rosa_samantha	Rh2AG434000 Rh2CG419700 Rh2DG452100
rosa_wichuraiana	Rw2G035380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1067
AccI	GTMKAC	1 cut(s)	822
AciI	CCGC	4 cut(s)	529, 712, 1634, 1833
AclWI	GGATC	1 cut(s)	1871
AcoI	YGGCCR	3 cut(s)	709, 1627, 1791
AcsI	RAATTY	4 cut(s)	64, 129, 1248, 1446
AcuI	CTGAAG	1 cut(s)	795
AfaI	GTAC	6 cut(s)	94, 250, 397, 875, 1319, 2031
AfeI	AGCGCT	2 cut(s)	780, 1705
AflIII	ACRYGT	1 cut(s)	1803
AgsI	TTSAA	7 cut(s)	245, 461, 1103, 1477, 1774, 2009, 2051
AjiI	CACGTC	1 cut(s)	194
AjnI	CCWGG	3 cut(s)	24, 100, 378
AluBI	AGCT	5 cut(s)	561, 591, 1048, 1800, 1908
AluI	AGCT	5 cut(s)	561, 591, 1048, 1800, 1908
Alw21I	GWGCWC	1 cut(s)	1602
Alw26I	GTCTC	4 cut(s)	300, 758, 915, 1140
AlwI	GGATC	1 cut(s)	1871
Aor51HI	AGCGCT	2 cut(s)	780, 1705
AoxI	GGCC	5 cut(s)	28, 390, 709, 1627, 1791
ApeKI	GCWGC	3 cut(s)	167, 1226, 1826
ApoI	RAATTY	4 cut(s)	64, 129, 1248, 1446
ArsI	GACNNNNNNTTYG	2 cut(s)	336, 368
AseI	ATTAAT	2 cut(s)	180, 1233
Asp700I	GAANNNNTTC	2 cut(s)	1146, 2046
AspLEI	GCGC	2 cut(s)	781, 1706
AspS9I	GGNCC	2 cut(s)	28, 390
AsuC2I	CCSGG	2 cut(s)	1795, 1898
AsuHPI	GGTGA	4 cut(s)	14, 68, 964, 1442
AsuII	TTCGAA	1 cut(s)	867
AsuNHI	GCTAGC	1 cut(s)	1829
BbsI	GAAGAC	2 cut(s)	349, 728
Bbv12I	GWGCWC	1 cut(s)	1602
BbvI	GCAGC	3 cut(s)	179, 1238, 1813
BceAI	ACGGC	1 cut(s)	1614
BciT130I	CCWGG	3 cut(s)	26, 102, 380
BciVI	GTATCC	1 cut(s)	1997
BclI	TGATCA	3 cut(s)	73, 1308, 1558
BcnI	CCSGG	2 cut(s)	1795, 1898
BcoDI	GTCTC	4 cut(s)	300, 758, 915, 1140
BfaI	CTAG	6 cut(s)	203, 588, 971, 1049, 1532, 1830
BfoI	RGCGCY	2 cut(s)	782, 1707
BfuI	GTATCC	1 cut(s)	1997
BisI	GCNGC	4 cut(s)	168, 712, 1227, 1827
BlsI	GCNGC	4 cut(s)	169, 713, 1228, 1828
BmcAI	AGTACT	1 cut(s)	875
Bme1390I	CCNGG	5 cut(s)	26, 102, 380, 1795, 1898
BmgBI	CACGTC	1 cut(s)	194
BmgT120I	GGNCC	2 cut(s)	28, 390
BmiI	GGNNCC	1 cut(s)	660
BmrFI	CCNGG	5 cut(s)	26, 102, 380, 1795, 1898
BmrI	ACTGGG	1 cut(s)	232
BmsI	GCATC	6 cut(s)	202, 629, 1042, 1146, 1407, 1716
BmtI	GCTAGC	1 cut(s)	1833
BmuI	ACTGGG	1 cut(s)	232
BpiI	GAAGAC	2 cut(s)	349, 728
BpmI	CTGGAG	1 cut(s)	1720
Bpu14I	TTCGAA	1 cut(s)	867
BpuMI	CCSGG	2 cut(s)	1795, 1898
BsaBI	GATNNNNATC	1 cut(s)	1056
BsaJI	CCNNGG	4 cut(s)	25, 378, 726, 1897
Bse1I	ACTGG	4 cut(s)	238, 1061, 1123, 2076
Bse3DI	GCAATG	2 cut(s)	95, 721
Bse8I	GATNNNNATC	1 cut(s)	1056
BseBI	CCWGG	3 cut(s)	26, 102, 380
BseDI	CCNNGG	4 cut(s)	25, 378, 726, 1897
BseGI	GGATG	7 cut(s)	41, 251, 645, 1057, 1422, 1464, 1731
BseJI	GATNNNNATC	1 cut(s)	1056
BseMI	GCAATG	2 cut(s)	95, 721
BseMII	CTCAG	4 cut(s)	615, 1530, 1881, 1956
BseNI	ACTGG	4 cut(s)	238, 1061, 1123, 2076
BseXI	GCAGC	3 cut(s)	179, 1238, 1813
BseYI	CCCAGC	2 cut(s)	1044, 1526
BsgI	GTGCAG	1 cut(s)	1236
BshFI	GGCC	5 cut(s)	30, 392, 711, 1629, 1793
BsiHKAI	GWGCWC	1 cut(s)	1602
BsiSI	CCGG	3 cut(s)	85, 1794, 1897
BsmAI	GTCTC	4 cut(s)	300, 758, 915, 1140
BsmBI	CGTCTC	1 cut(s)	915
BsmI	GAATGC	3 cut(s)	277, 988, 1441
BsnI	GGCC	5 cut(s)	30, 392, 711, 1629, 1793
Bsp119I	TTCGAA	1 cut(s)	867
Bsp1286I	GDGCHC	1 cut(s)	1602
Bsp1407I	TGTACA	2 cut(s)	395, 1317
Bsp143I	GATC	7 cut(s)	33, 73, 990, 1308, 1558, 1618, 1863
Bsp19I	CCATGG	1 cut(s)	726
BspACI	CCGC	4 cut(s)	529, 712, 1634, 1833
BspANI	GGCC	5 cut(s)	30, 392, 711, 1629, 1793
BspCNI	CTCAG	4 cut(s)	616, 1531, 1880, 1955
BspLI	GGNNCC	1 cut(s)	660
BspOI	GCTAGC	1 cut(s)	1833
BspPI	GGATC	1 cut(s)	1871
BspQI	GCTCTTC	1 cut(s)	1713
BspT104I	TTCGAA	1 cut(s)	867
BsrDI	GCAATG	2 cut(s)	95, 721
BsrGI	TGTACA	2 cut(s)	395, 1317
BsrI	ACTGG	4 cut(s)	238, 1061, 1123, 2076
BssECI	CCNNGG	4 cut(s)	25, 378, 726, 1897
BssMI	GATC	7 cut(s)	33, 73, 990, 1308, 1558, 1618, 1863
BssT1I	CCWWGG	1 cut(s)	726
Bst2UI	CCWGG	3 cut(s)	26, 102, 380
Bst4CI	ACNGT	4 cut(s)	110, 537, 1256, 1373
Bst6I	CTCTTC	3 cut(s)	378, 864, 1713
BstAUI	TGTACA	2 cut(s)	395, 1317
BstBI	TTCGAA	1 cut(s)	867
BstC8I	GCNNGC	6 cut(s)	529, 783, 1609, 1831, 1962, 1966
BstDEI	CTNAG	6 cut(s)	281, 624, 1442, 1539, 1867, 1942
BstDSI	CCRYGG	1 cut(s)	726
BstF5I	GGATG	7 cut(s)	41, 251, 645, 1057, 1422, 1464, 1731
BstH2I	RGCGCY	2 cut(s)	782, 1707
BstHHI	GCGC	2 cut(s)	781, 1706
BstKTI	GATC	7 cut(s)	36, 76, 993, 1311, 1561, 1621, 1866
BstMAI	GTCTC	4 cut(s)	300, 758, 915, 1140
BstMBI	GATC	7 cut(s)	33, 73, 990, 1308, 1558, 1618, 1863
BstMWI	GCNNNNNNNGC	4 cut(s)	164, 558, 812, 1223
BstNI	CCWGG	3 cut(s)	26, 102, 380
BstNSI	RCATGY	6 cut(s)	148, 262, 907, 1611, 1675, 1807
BstSCI	CCNGG	5 cut(s)	24, 100, 378, 1793, 1896
BstV1I	GCAGC	3 cut(s)	179, 1238, 1813
BstV2I	GAAGAC	2 cut(s)	349, 728
BstX2I	RGATCY	1 cut(s)	1863
BstYI	RGATCY	1 cut(s)	1863
BsuI	GTATCC	1 cut(s)	1997
BsuRI	GGCC	5 cut(s)	30, 392, 711, 1629, 1793
BtgI	CCRYGG	1 cut(s)	726
BtgZI	GCGATG	1 cut(s)	1483
BtrI	CACGTC	1 cut(s)	194
BtsCI	GGATG	7 cut(s)	41, 251, 645, 1057, 1422, 1464, 1731
BtsIMutI	CAGTG	2 cut(s)	106, 1116
Cac8I	GCNNGC	6 cut(s)	529, 783, 1609, 1831, 1962, 1966
CfoI	GCGC	2 cut(s)	781, 1706
Cfr13I	GGNCC	2 cut(s)	28, 390
Csp6I	GTAC	6 cut(s)	93, 249, 396, 874, 1318, 2030
CviQI	GTAC	6 cut(s)	93, 249, 396, 874, 1318, 2030
DdeI	CTNAG	6 cut(s)	281, 624, 1442, 1539, 1867, 1942
DpnI	GATC	7 cut(s)	35, 75, 992, 1310, 1560, 1620, 1865
DpnII	GATC	7 cut(s)	33, 73, 990, 1308, 1558, 1618, 1863
EaeI	YGGCCR	3 cut(s)	709, 1627, 1791
Eam1104I	CTCTTC	3 cut(s)	378, 864, 1713
EarI	CTCTTC	3 cut(s)	378, 864, 1713
Eco130I	CCWWGG	1 cut(s)	726
Eco47III	AGCGCT	2 cut(s)	780, 1705
Eco57I	CTGAAG	1 cut(s)	795
EcoO109I	RGGNCCY	1 cut(s)	390
EcoRII	CCWGG	3 cut(s)	24, 100, 378
EcoT14I	CCWWGG	1 cut(s)	726
EcoT22I	ATGCAT	5 cut(s)	905, 937, 1422, 1609, 1613
ErhI	CCWWGG	1 cut(s)	726
Esp3I	CGTCTC	1 cut(s)	915
FauI	CCCGC	3 cut(s)	536, 1627, 1826
FauNDI	CATATG	1 cut(s)	1000
FbaI	TGATCA	3 cut(s)	73, 1308, 1558
FblI	GTMKAC	1 cut(s)	822
Fnu4HI	GCNGC	4 cut(s)	168, 712, 1227, 1827
FokI	GGATG	7 cut(s)	28, 238, 652, 1044, 1429, 1471, 1738
Fsp4HI	GCNGC	4 cut(s)	168, 712, 1227, 1827
FspBI	CTAG	6 cut(s)	203, 588, 971, 1049, 1532, 1830
GlaI	GCGC	2 cut(s)	780, 1705
GluI	GCNGC	4 cut(s)	168, 712, 1227, 1827
GsaI	CCCAGC	2 cut(s)	1048, 1530
GsuI	CTGGAG	1 cut(s)	1720
HaeII	RGCGCY	2 cut(s)	782, 1707
HaeIII	GGCC	5 cut(s)	30, 392, 711, 1629, 1793
HapII	CCGG	3 cut(s)	85, 1794, 1897
HhaI	GCGC	2 cut(s)	781, 1706
Hin6I	GCGC	2 cut(s)	779, 1704
HinP1I	GCGC	2 cut(s)	779, 1704
HincII	GTYRAC	1 cut(s)	823
HindII	GTYRAC	1 cut(s)	823
HinfI	GANTC	8 cut(s)	174, 230, 838, 1007, 1425, 1473, 1847, 1912
HpaII	CCGG	3 cut(s)	85, 1794, 1897
HphI	GGTGA	4 cut(s)	14, 68, 964, 1442
Hpy166II	GTNNAC	7 cut(s)	22, 113, 121, 369, 823, 1116, 1320
Hpy188I	TCNGA	2 cut(s)	625, 1786
Hpy188III	TCNNGA	5 cut(s)	1139, 1376, 1465, 1699, 2051
Hpy8I	GTNNAC	7 cut(s)	22, 113, 121, 369, 823, 1116, 1320
HpyAV	CCTTC	3 cut(s)	89, 1337, 1643
HpyCH4III	ACNGT	4 cut(s)	110, 537, 1256, 1373
HpyCH4IV	ACGT	2 cut(s)	193, 924
HpyF10VI	GCNNNNNNNGC	4 cut(s)	164, 558, 812, 1223
HpyF3I	CTNAG	6 cut(s)	281, 624, 1442, 1539, 1867, 1942
HpySE526I	ACGT	2 cut(s)	193, 924
HspAI	GCGC	2 cut(s)	779, 1704
Ksp22I	TGATCA	3 cut(s)	73, 1308, 1558
Kzo9I	GATC	7 cut(s)	33, 73, 990, 1308, 1558, 1618, 1863
LguI	GCTCTTC	1 cut(s)	1713
LmnI	GCTCC	4 cut(s)	658, 1597, 1701, 1797
Lsp1109I	GCAGC	3 cut(s)	179, 1238, 1813
LweI	GCATC	6 cut(s)	202, 629, 1042, 1146, 1407, 1716
MaeI	CTAG	6 cut(s)	203, 588, 971, 1049, 1532, 1830
MaeII	ACGT	2 cut(s)	193, 924
MaeIII	GTNAC	5 cut(s)	512, 670, 1186, 1489, 1534
MalI	GATC	7 cut(s)	35, 75, 992, 1310, 1560, 1620, 1865
MboI	GATC	7 cut(s)	33, 73, 990, 1308, 1558, 1618, 1863
MboII	GAAGA	8 cut(s)	354, 365, 733, 847, 881, 1613, 1700, 1763
MfeI	CAATTG	1 cut(s)	1180
MflI	RGATCY	1 cut(s)	1863
MhlI	GDGCHC	1 cut(s)	1602
MlyI	GAGTC	4 cut(s)	168, 224, 1419, 1841
MmeI	TCCRAC	5 cut(s)	279, 636, 959, 1067, 1276
Mph1103I	ATGCAT	5 cut(s)	905, 937, 1422, 1609, 1613
MroXI	GAANNNNTTC	2 cut(s)	1146, 2046
MseI	TTAA	8 cut(s)	180, 321, 600, 633, 1233, 1886, 1920, 1976
MslI	CAYNNNNRTG	7 cut(s)	438, 471, 846, 898, 1257, 1676, 1808
MspI	CCGG	3 cut(s)	85, 1794, 1897
MspR9I	CCNGG	5 cut(s)	26, 102, 380, 1795, 1898
MunI	CAATTG	1 cut(s)	1180
Mva1269I	GAATGC	3 cut(s)	277, 988, 1441
MvaI	CCWGG	3 cut(s)	26, 102, 380
MwoI	GCNNNNNNNGC	4 cut(s)	164, 558, 812, 1223
NciI	CCSGG	2 cut(s)	1795, 1898
NcoI	CCATGG	1 cut(s)	726
NdeI	CATATG	1 cut(s)	1000
NdeII	GATC	7 cut(s)	33, 73, 990, 1308, 1558, 1618, 1863
NheI	GCTAGC	1 cut(s)	1829
NlaIV	GGNNCC	1 cut(s)	660
NmeAIII	GCCGAG	1 cut(s)	1829
NmuCI	GTSAC	2 cut(s)	670, 1186
NsiI	ATGCAT	5 cut(s)	905, 937, 1422, 1609, 1613
NspI	RCATGY	6 cut(s)	148, 262, 907, 1611, 1675, 1807
NspV	TTCGAA	1 cut(s)	867
PaeI	GCATGC	1 cut(s)	1611
PciI	ACATGT	1 cut(s)	1803
PciSI	GCTCTTC	1 cut(s)	1713
PctI	GAATGC	3 cut(s)	277, 988, 1441
PdmI	GAANNNNTTC	2 cut(s)	1146, 2046
PfeI	GAWTC	4 cut(s)	838, 1007, 1473, 1912
PkrI	GCNGC	4 cut(s)	169, 713, 1228, 1828
PleI	GAGTC	4 cut(s)	168, 224, 1419, 1841
PpsI	GAGTC	4 cut(s)	168, 224, 1419, 1841
PscI	ACATGT	1 cut(s)	1803
PshBI	ATTAAT	2 cut(s)	180, 1233
PsiI	TTATAA	1 cut(s)	1067
Psp6I	CCWGG	3 cut(s)	24, 100, 378
PspFI	CCCAGC	2 cut(s)	1044, 1526
PspGI	CCWGG	3 cut(s)	24, 100, 378
PspN4I	GGNNCC	1 cut(s)	660
PspPI	GGNCC	2 cut(s)	28, 390
PsuI	RGATCY	1 cut(s)	1863
RsaI	GTAC	6 cut(s)	94, 250, 397, 875, 1319, 2031
RsaNI	GTAC	6 cut(s)	93, 249, 396, 874, 1318, 2030
RseI	CAYNNNNRTG	7 cut(s)	438, 471, 846, 898, 1257, 1676, 1808
SalI	GTCGAC	1 cut(s)	821
SapI	GCTCTTC	1 cut(s)	1713
SaqAI	TTAA	8 cut(s)	180, 321, 600, 633, 1233, 1886, 1920, 1976
SatI	GCNGC	4 cut(s)	168, 712, 1227, 1827
Sau3AI	GATC	7 cut(s)	33, 73, 990, 1308, 1558, 1618, 1863
Sau96I	GGNCC	2 cut(s)	28, 390
ScaI	AGTACT	1 cut(s)	875
SchI	GAGTC	4 cut(s)	168, 224, 1419, 1841
ScrFI	CCNGG	5 cut(s)	26, 102, 380, 1795, 1898
SduI	GDGCHC	1 cut(s)	1602
SfaNI	GCATC	6 cut(s)	202, 629, 1042, 1146, 1407, 1716
SfuI	TTCGAA	1 cut(s)	867
SmiMI	CAYNNNNRTG	7 cut(s)	438, 471, 846, 898, 1257, 1676, 1808
SphI	GCATGC	1 cut(s)	1611
SsiI	CCGC	4 cut(s)	529, 712, 1634, 1833
SspI	AATATT	4 cut(s)	1038, 1366, 1819, 2059
SspMI	CTAG	6 cut(s)	203, 588, 971, 1049, 1532, 1830
StyD4I	CCNGG	5 cut(s)	24, 100, 378, 1793, 1896
StyI	CCWWGG	1 cut(s)	726
TaaI	ACNGT	4 cut(s)	110, 537, 1256, 1373
TaiI	ACGT	2 cut(s)	196, 927
TaqI	TCGA	2 cut(s)	822, 867
TatI	WGTACW	4 cut(s)	92, 395, 873, 1317
TauI	GCSGC	1 cut(s)	714
TfiI	GAWTC	4 cut(s)	838, 1007, 1473, 1912
Tru1I	TTAA	8 cut(s)	180, 321, 600, 633, 1233, 1886, 1920, 1976
Tru9I	TTAA	8 cut(s)	180, 321, 600, 633, 1233, 1886, 1920, 1976
TscAI	CASTG	2 cut(s)	113, 1123
TseFI	GTSAC	2 cut(s)	670, 1186
TseI	GCWGC	3 cut(s)	167, 1226, 1826
Tsp45I	GTSAC	2 cut(s)	670, 1186
TspDTI	ATGAA	9 cut(s)	17, 324, 830, 1442, 1486, 1694, 1793, 1924, 1970
TspRI	CASTG	2 cut(s)	113, 1123
VspI	ATTAAT	2 cut(s)	180, 1233
XapI	RAATTY	4 cut(s)	64, 129, 1248, 1446
XceI	RCATGY	6 cut(s)	148, 262, 907, 1611, 1675, 1807
XmiI	GTMKAC	1 cut(s)	822
XmnI	GAANNNNTTC	2 cut(s)	1146, 2046
XspI	CTAG	6 cut(s)	203, 588, 971, 1049, 1532, 1830
ZrmI	AGTACT	1 cut(s)	875
Zsp2I	ATGCAT	5 cut(s)	905, 937, 1422, 1609, 1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.