RLG00000024192

RING-H2 finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0016881
Physical Location & Seq
Reverse (-)
32925208 .. 32928807
3600 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024192

Sequence Viewer

Length: 1266 bp
ATGGAGGACGTTGCGTCCAACTTCCAACCTTCTTCAGGGTCCTACTTCACACCCCTTTTGATTTCCATGGCCGGAATAGTCTCCACTACTCTAGCCGTAATAGCATACCATTTCATAGTGACGAAGTTTTGCTTGAGGCATAGGCAGAGGCAGAGACAGAGACTACTAGAAGCATTCTCTAATTTCTCACCGCAACCAAACCCCAACAACAACCAAACTGGGGTAGATGAGAAAGTCCTGAGCTCTATCCCAATTCTCTCTTACTCCACAAAAGACGGACTGACCGGTCTAGATCAGAGTGAGTGCGTGATCTGCCTGGGTGAGCTGGAAGATGGTGACATGGTGAGGCTTCTGCCCAATTGCAAACATGTGTTTCACAATCCATGCATAGACAAATGGTTCTTGGCACATACAAACTGCCCGGTTTGTAGGGCACCTATAGCCGCGCCCATTAAAACTGTGGAGCCCTTGCCTACAAATCAAGAATCCCGGGATCAAGAAGTTCGAGATGAAGCCAGCAGCGTTGAATGTTCGAATTCGAATTCGAATTCGAATTCGTCTCCCCAGAGTCATGAGGAGGAAAGGGGACTACTTAGCAATAATGCAACCACTGTTCAATTGCCAAAAAATGGTTTGCTAAGGAATTGCGTGTCCCTCGTGCTGTTGCCAATAGAAGGAAGTACTAAGCAGAAAAGATTTGTTAACGGGTTGGAGAGGTCGTTGTCTTTGGATCCGTCACATATCCTCATCAACGTACAGAGAGAATGTGGCGATGATCACAAGCCCTCTTCATCATCATCATCACCATCTTCTCCTTCTTCTTCTTCTCCTCCTTTGGCGAAAGCGGTTCTTGTAGAGTCTGGATCATTCAAGGAAATATCTTTCAGACAGTTTGATCGGATGTCTACAGTGTTCATAAGATCACTTTCGCAGTTGCGGGGTCCGGGGCCACATGCTCTCCGACAAGGGGTGGTGGTGGGCCGCGGCGGTTGCTGGTTTATTGGAGGTAGTGGGTGGCTGGGTTTTCGGGACGAGAAGTTTGCAGCGCTTGGGGAGTTGGGGTGGACTATTGTTCTTCTGGTTCTTGTTTGTCTTGGGATTGTGAATTTATGGGTTGGGAGAGGAAGAAGCAATCGAGATTGGGTTGAGAGGTGGCGGTGGGAGTGGGGTGGTGGTGGAGGAATCGCGGTTGAGAATCCAATCGGTGGCTTTGAGAGCAGAGTTGCTGCCGGTGGTGGCAAGGTTGGTGGGGAAGCCCATGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

422

Amino Acids

45.84

Weight (kDa)

7.12

Isoelectric Point (pI)

54.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 101 - 144 3.7e-14 Ring finger domain
zf-RING_11 PF17123 101 - 130 2.4e-11 RING-like zinc finger
zf-C3HC4_2 PF13923 101 - 143 4.8e-09 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 101 - 144 4.6e-07 RING-H2 zinc finger domain
zf-RING_5 PF14634 101 - 144 6.6e-06 zinc-RING finger domain
zf-C3HC4 PF00097 102 - 143 1.8e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016881)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g17171
malus_domestica MD12G1103100.v1.1 MD14G1097100.v1.1
prunus_persica Prupe.7G123200_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0471271
rosa_laevigata RLG00000024192
rosa_multiflora Rmu_ssc0000091.1_g000001
rosa_roxburghii Rroxscaffold_6G00410150
rosa_rugosa Rorug03G0116700
rosa_samantha Rh3AG166000 Rh3BG191400 Rh3CG181700 Rh3DG184300
rosa_wichuraiana Rw3G015620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 285
AccB1I GGYRCC 1 cut(s) 433
AccB7I CCANNNNNTGG 2 cut(s) 629, 1205
AccI GTMKAC 1 cut(s) 905
AccII CGCG 3 cut(s) 446, 984, 1187
AciI CCGC 9 cut(s) 191, 444, 845, 937, 982, 984, 987, 1156, 1187
AclWI GGATC 4 cut(s) 501, 725, 738, 871
AcoI YGGCCR 1 cut(s) 69
AcsI RAATTY 5 cut(s) 535, 541, 547, 553, 1105
AcuI CTGAAG 1 cut(s) 18
AfaI GTAC 2 cut(s) 682, 756
AfeI AGCGCT 1 cut(s) 1047
AfiI CCNNNNNNNGG 6 cut(s) 35, 220, 629, 674, 967, 1205
AflIII ACRYGT 1 cut(s) 367
AgeI ACCGGT 1 cut(s) 284
AgsI TTSAA 3 cut(s) 527, 617, 871
AhdI GACNNNNNGTC 1 cut(s) 13
AjnI CCWGG 1 cut(s) 315
AluBI AGCT 2 cut(s) 243, 325
AluI AGCT 2 cut(s) 243, 325
Alw21I GWGCWC 1 cut(s) 245
Alw26I GTCTC 4 cut(s) 85, 148, 154, 564
AlwI GGATC 4 cut(s) 501, 725, 738, 871
Ama87I CYCGRG 1 cut(s) 489
Aor51HI AGCGCT 1 cut(s) 1047
AoxI GGCC 3 cut(s) 69, 947, 979
ApeKI GCWGC 3 cut(s) 519, 1043, 1226
ApoI RAATTY 5 cut(s) 535, 541, 547, 553, 1105
ArsI GACNNNNNNTTYG 2 cut(s) 1022, 1054
AsiGI ACCGGT 1 cut(s) 284
AspLEI GCGC 2 cut(s) 448, 1048
AspS9I GGNCC 4 cut(s) 39, 941, 947, 979
AsuC2I CCSGG 4 cut(s) 422, 490, 491, 945
AsuHPI GGTGA 5 cut(s) 180, 332, 347, 355, 795
AsuII TTCGAA 4 cut(s) 533, 539, 545, 551
AvaI CYCGRG 1 cut(s) 489
AvaII GGWCC 2 cut(s) 39, 941
BaeGI GKGCMC 1 cut(s) 436
BamHI GGATCC 1 cut(s) 730
BanI GGYRCC 1 cut(s) 433
BanII GRGCYC 2 cut(s) 245, 468
BauI CACGAG 1 cut(s) 656
Bbv12I GWGCWC 1 cut(s) 245
BbvI GCAGC 3 cut(s) 531, 1055, 1213
BccI CCATC 2 cut(s) 326, 814
BceAI ACGGC 1 cut(s) 80
BcgI CGANNNNNNTGC 2 cut(s) 1022, 1056
BciT130I CCWGG 1 cut(s) 317
BclI TGATCA 1 cut(s) 775
BcnI CCSGG 4 cut(s) 422, 490, 491, 945
BcoDI GTCTC 4 cut(s) 85, 148, 154, 564
BfaI CTAG 3 cut(s) 92, 167, 290
BfmI CTRYAG 2 cut(s) 438, 906
BfoI RGCGCY 1 cut(s) 1049
BisI GCNGC 6 cut(s) 444, 520, 982, 985, 1044, 1227
BlsI GCNGC 6 cut(s) 445, 521, 983, 986, 1045, 1228
BmcAI AGTACT 1 cut(s) 682
Bme1390I CCNGG 5 cut(s) 317, 422, 490, 491, 945
Bme18I GGWCC 2 cut(s) 39, 941
BmeRI GACNNNNNGTC 1 cut(s) 13
BmeT110I CYCGRG 1 cut(s) 489
BmgT120I GGNCC 4 cut(s) 39, 941, 947, 979
BmiI GGNNCC 6 cut(s) 40, 435, 465, 732, 942, 948
BmrFI CCNGG 5 cut(s) 317, 422, 490, 491, 945
BmrI ACTGGG 1 cut(s) 228
BmuI ACTGGG 1 cut(s) 228
Bpu10I CCTNAGC 2 cut(s) 239, 638
Bpu14I TTCGAA 4 cut(s) 533, 539, 545, 551
BpuEI CTTGAG 1 cut(s) 154
BpuMI CCSGG 4 cut(s) 422, 490, 491, 945
BsaJI CCNNGG 5 cut(s) 66, 316, 489, 944, 982
BsaWI WCCGGW 1 cut(s) 284
BsaXI ACNNNNNCTCC 6 cut(s) 704, 734, 942, 972, 1046, 1076
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 220, 629, 674, 967, 1205
Bse118I RCCGGY 2 cut(s) 284, 1229
Bse1I ACTGG 1 cut(s) 223
BseBI CCWGG 1 cut(s) 317
BseDI CCNNGG 5 cut(s) 66, 316, 489, 944, 982
BseGI GGATG 1 cut(s) 906
BseLI CCNNNNNNNGG 6 cut(s) 35, 220, 629, 674, 967, 1205
BseMII CTCAG 1 cut(s) 230
BseNI ACTGG 1 cut(s) 223
BseRI GAGGAG 2 cut(s) 590, 819
BseSI GKGCMC 1 cut(s) 436
BseXI GCAGC 3 cut(s) 531, 1055, 1213
BseYI CCCAGC 1 cut(s) 1018
Bsh1236I CGCG 3 cut(s) 446, 984, 1187
BshFI GGCC 3 cut(s) 71, 949, 981
BshNI GGYRCC 1 cut(s) 433
BshTI ACCGGT 1 cut(s) 284
BsiHKAI GWGCWC 1 cut(s) 245
BsiHKCI CYCGRG 1 cut(s) 489
BsiSI CCGG 6 cut(s) 72, 285, 422, 490, 944, 1230
BslFI GGGAC 3 cut(s) 600, 637, 1043
BslI CCNNNNNNNGG 6 cut(s) 35, 220, 629, 674, 967, 1205
BsmAI GTCTC 4 cut(s) 85, 148, 154, 564
BsmBI CGTCTC 1 cut(s) 564
BsmFI GGGAC 3 cut(s) 600, 637, 1043
BsmI GAATGC 1 cut(s) 173
BsnI GGCC 3 cut(s) 71, 949, 981
BsoBI CYCGRG 1 cut(s) 489
Bsp119I TTCGAA 4 cut(s) 533, 539, 545, 551
Bsp1286I GDGCHC 3 cut(s) 245, 436, 468
Bsp143I GATC 8 cut(s) 292, 309, 493, 730, 775, 863, 895, 920
Bsp19I CCATGG 1 cut(s) 66
BspACI CCGC 9 cut(s) 191, 444, 845, 937, 982, 984, 987, 1156, 1187
BspANI GGCC 3 cut(s) 71, 949, 981
BspCNI CTCAG 1 cut(s) 231
BspFNI CGCG 3 cut(s) 446, 984, 1187
BspHI TCATGA 1 cut(s) 571
BspLI GGNNCC 6 cut(s) 40, 435, 465, 732, 942, 948
BspPI GGATC 4 cut(s) 501, 725, 738, 871
BspT104I TTCGAA 4 cut(s) 533, 539, 545, 551
BspT107I GGYRCC 1 cut(s) 433
BsrFI RCCGGY 2 cut(s) 284, 1229
BsrI ACTGG 1 cut(s) 223
BssAI RCCGGY 2 cut(s) 284, 1229
BssECI CCNNGG 5 cut(s) 66, 316, 489, 944, 982
BssMI GATC 8 cut(s) 292, 309, 493, 730, 775, 863, 895, 920
BssSI CACGAG 1 cut(s) 656
BssT1I CCWWGG 1 cut(s) 66
Bst2BI CACGAG 1 cut(s) 656
Bst2UI CCWGG 1 cut(s) 317
Bst4CI ACNGT 4 cut(s) 460, 613, 891, 910
Bst6I CTCTTC 1 cut(s) 793
BstBI TTCGAA 4 cut(s) 533, 539, 545, 551
BstC8I GCNNGC 1 cut(s) 517
BstDEI CTNAG 5 cut(s) 239, 593, 638, 684, 1263
BstDSI CCRYGG 2 cut(s) 66, 982
BstENI CCTNNNNNAGG 1 cut(s) 33
BstF5I GGATG 1 cut(s) 906
BstFNI CGCG 3 cut(s) 446, 984, 1187
BstH2I RGCGCY 1 cut(s) 1049
BstHHI GCGC 2 cut(s) 448, 1048
BstKTI GATC 8 cut(s) 295, 312, 496, 733, 778, 866, 898, 923
BstMAI GTCTC 4 cut(s) 85, 148, 154, 564
BstMBI GATC 8 cut(s) 292, 309, 493, 730, 775, 863, 895, 920
BstMWI GCNNNNNNNGC 5 cut(s) 101, 312, 440, 990, 1215
BstNI CCWGG 1 cut(s) 317
BstNSI RCATGY 2 cut(s) 371, 956
BstSCI CCNGG 5 cut(s) 315, 420, 488, 489, 943
BstSFI CTRYAG 2 cut(s) 438, 906
BstSLI GKGCMC 1 cut(s) 436
BstUI CGCG 3 cut(s) 446, 984, 1187
BstV1I GCAGC 3 cut(s) 531, 1055, 1213
BstX2I RGATCY 1 cut(s) 730
BstYI RGATCY 1 cut(s) 730
BsuRI GGCC 3 cut(s) 71, 949, 981
BtgI CCRYGG 2 cut(s) 66, 982
BtgZI GCGATG 1 cut(s) 786
BtsCI GGATG 1 cut(s) 906
BtsIMutI CAGTG 2 cut(s) 609, 915
Cac8I GCNNGC 1 cut(s) 517
CciI TCATGA 1 cut(s) 571
CfoI GCGC 2 cut(s) 448, 1048
Cfr10I RCCGGY 2 cut(s) 284, 1229
Cfr13I GGNCC 4 cut(s) 39, 941, 947, 979
Cfr42I CCGCGG 1 cut(s) 985
Cfr9I CCCGGG 1 cut(s) 489
CseI GACGC 1 cut(s) 3
Csp6I GTAC 2 cut(s) 681, 755
CspAI ACCGGT 1 cut(s) 284
CspCI CAANNNNNGTGG 2 cut(s) 1228, 1263
CviAII CATG 7 cut(s) 67, 340, 368, 384, 572, 953, 1259
CviQI GTAC 2 cut(s) 681, 755
DdeI CTNAG 5 cut(s) 239, 593, 638, 684, 1263
DpnI GATC 8 cut(s) 294, 311, 495, 732, 777, 865, 897, 922
DpnII GATC 8 cut(s) 292, 309, 493, 730, 775, 863, 895, 920
DrdI GACNNNNNNGTC 1 cut(s) 285
DriI GACNNNNNGTC 1 cut(s) 13
DseDI GACNNNNNNGTC 1 cut(s) 285
EaeI YGGCCR 1 cut(s) 69
Eam1104I CTCTTC 1 cut(s) 793
Eam1105I GACNNNNNGTC 1 cut(s) 13
EarI CTCTTC 1 cut(s) 793
Ecl136II GAGCTC 1 cut(s) 243
Eco130I CCWWGG 1 cut(s) 66
Eco24I GRGCYC 2 cut(s) 245, 468
Eco47I GGWCC 2 cut(s) 39, 941
Eco47III AGCGCT 1 cut(s) 1047
Eco53kI GAGCTC 1 cut(s) 243
Eco57I CTGAAG 1 cut(s) 18
Eco88I CYCGRG 1 cut(s) 489
EcoICRI GAGCTC 1 cut(s) 243
EcoNI CCTNNNNNAGG 1 cut(s) 33
EcoO109I RGGNCCY 1 cut(s) 39
EcoRI GAATTC 4 cut(s) 535, 541, 547, 553
EcoRII CCWGG 1 cut(s) 315
EcoT14I CCWWGG 1 cut(s) 66
EcoT22I ATGCAT 1 cut(s) 389
EcoT38I GRGCYC 2 cut(s) 245, 468
ErhI CCWWGG 1 cut(s) 66
Esp3I CGTCTC 1 cut(s) 564
FaeI CATG 7 cut(s) 70, 343, 371, 387, 575, 956, 1262
FalI AAGNNNNNCTT 4 cut(s) 116, 148, 834, 866
FaqI GGGAC 3 cut(s) 600, 637, 1043
FatI CATG 7 cut(s) 66, 339, 367, 383, 571, 952, 1258
FauI CCCGC 1 cut(s) 930
FbaI TGATCA 1 cut(s) 775
FblI GTMKAC 1 cut(s) 905
Fnu4HI GCNGC 6 cut(s) 444, 520, 982, 985, 1044, 1227
FokI GGATG 1 cut(s) 913
FriOI GRGCYC 2 cut(s) 245, 468
Fsp4HI GCNGC 6 cut(s) 444, 520, 982, 985, 1044, 1227
FspBI CTAG 3 cut(s) 92, 167, 290
GlaI GCGC 2 cut(s) 447, 1047
GluI GCNGC 6 cut(s) 444, 520, 982, 985, 1044, 1227
GsaI CCCAGC 1 cut(s) 1022
HaeII RGCGCY 1 cut(s) 1049
HaeIII GGCC 3 cut(s) 71, 949, 981
HapII CCGG 6 cut(s) 72, 285, 422, 490, 944, 1230
HgaI GACGC 1 cut(s) 3
HhaI GCGC 2 cut(s) 448, 1048
Hin1II CATG 7 cut(s) 70, 343, 371, 387, 575, 956, 1262
Hin6I GCGC 2 cut(s) 446, 1046
HinP1I GCGC 2 cut(s) 446, 1046
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HinfI GANTC 5 cut(s) 485, 568, 857, 1182, 1195
HpaI GTTAAC 1 cut(s) 703
HpaII CCGG 6 cut(s) 72, 285, 422, 490, 944, 1230
HphI GGTGA 5 cut(s) 180, 332, 347, 355, 795
Hpy166II GTNNAC 3 cut(s) 703, 906, 1065
Hpy188I TCNGA 4 cut(s) 297, 887, 900, 962
Hpy188III TCNNGA 9 cut(s) 238, 290, 482, 497, 506, 572, 861, 1028, 1136
Hpy8I GTNNAC 3 cut(s) 703, 906, 1065
HpyAV CCTTC 3 cut(s) 39, 668, 825
HpyCH4III ACNGT 4 cut(s) 460, 613, 891, 910
HpyCH4IV ACGT 2 cut(s) 9, 753
HpyCH4V TGCA 4 cut(s) 363, 387, 605, 1043
HpyF10VI GCNNNNNNNGC 5 cut(s) 101, 312, 440, 990, 1215
HpyF3I CTNAG 5 cut(s) 239, 593, 638, 684, 1263
HpySE526I ACGT 2 cut(s) 9, 753
Hsp92II CATG 7 cut(s) 70, 343, 371, 387, 575, 956, 1262
HspAI GCGC 2 cut(s) 446, 1046
Ksp22I TGATCA 1 cut(s) 775
KspAI GTTAAC 1 cut(s) 703
KspI CCGCGG 1 cut(s) 985
Kzo9I GATC 8 cut(s) 292, 309, 493, 730, 775, 863, 895, 920
LmnI GCTCC 1 cut(s) 463
Lsp1109I GCAGC 3 cut(s) 531, 1055, 1213
MaeI CTAG 3 cut(s) 92, 167, 290
MaeII ACGT 2 cut(s) 9, 753
MaeIII GTNAC 3 cut(s) 118, 335, 735
MalI GATC 8 cut(s) 294, 311, 495, 732, 777, 865, 897, 922
MboI GATC 8 cut(s) 292, 309, 493, 730, 775, 863, 895, 920
MboII GAAGA 9 cut(s) 24, 341, 780, 801, 810, 813, 816, 1067, 1137
MfeI CAATTG 2 cut(s) 358, 617
MflI RGATCY 1 cut(s) 730
MhlI GDGCHC 3 cut(s) 245, 436, 468
MlyI GAGTC 2 cut(s) 577, 866
MmeI TCCRAC 4 cut(s) 42, 49, 690, 985
Mph1103I ATGCAT 1 cut(s) 389
MseI TTAA 2 cut(s) 453, 702
MspA1I CMGCKG 1 cut(s) 984
MspI CCGG 6 cut(s) 72, 285, 422, 490, 944, 1230
MspR9I CCNGG 5 cut(s) 317, 422, 490, 491, 945
MunI CAATTG 2 cut(s) 358, 617
Mva1269I GAATGC 1 cut(s) 173
MvaI CCWGG 1 cut(s) 317
MvnI CGCG 3 cut(s) 446, 984, 1187
MwoI GCNNNNNNNGC 5 cut(s) 101, 312, 440, 990, 1215
NciI CCSGG 4 cut(s) 422, 490, 491, 945
NcoI CCATGG 1 cut(s) 66
NdeII GATC 8 cut(s) 292, 309, 493, 730, 775, 863, 895, 920
NlaIII CATG 7 cut(s) 70, 343, 371, 387, 575, 956, 1262
NlaIV GGNNCC 6 cut(s) 40, 435, 465, 732, 942, 948
NmuCI GTSAC 3 cut(s) 118, 335, 735
NsiI ATGCAT 1 cut(s) 389
NspI RCATGY 2 cut(s) 371, 956
NspV TTCGAA 4 cut(s) 533, 539, 545, 551
PagI TCATGA 1 cut(s) 571
PciI ACATGT 1 cut(s) 367
PctI GAATGC 1 cut(s) 173
PfeI GAWTC 3 cut(s) 485, 1182, 1195
PflMI CCANNNNNTGG 2 cut(s) 629, 1205
PinAI ACCGGT 1 cut(s) 284
PkrI GCNGC 6 cut(s) 445, 521, 983, 986, 1045, 1228
PleI GAGTC 2 cut(s) 576, 865
PpsI GAGTC 2 cut(s) 576, 865
PpuMI RGGWCCY 1 cut(s) 39
PscI ACATGT 1 cut(s) 367
Psp124BI GAGCTC 1 cut(s) 245
Psp5II RGGWCCY 1 cut(s) 39
Psp6I CCWGG 1 cut(s) 315
PspFI CCCAGC 1 cut(s) 1018
PspGI CCWGG 1 cut(s) 315
PspN4I GGNNCC 6 cut(s) 40, 435, 465, 732, 942, 948
PspPI GGNCC 4 cut(s) 39, 941, 947, 979
PspPPI RGGWCCY 1 cut(s) 39
PsuI RGATCY 1 cut(s) 730
RsaI GTAC 2 cut(s) 682, 756
RsaNI GTAC 2 cut(s) 681, 755
SacI GAGCTC 1 cut(s) 245
SacII CCGCGG 1 cut(s) 985
SaqAI TTAA 2 cut(s) 453, 702
SatI GCNGC 6 cut(s) 444, 520, 982, 985, 1044, 1227
Sau3AI GATC 8 cut(s) 292, 309, 493, 730, 775, 863, 895, 920
Sau96I GGNCC 4 cut(s) 39, 941, 947, 979
ScaI AGTACT 1 cut(s) 682
SchI GAGTC 2 cut(s) 577, 866
ScrFI CCNGG 5 cut(s) 317, 422, 490, 491, 945
SduI GDGCHC 3 cut(s) 245, 436, 468
SfcI CTRYAG 2 cut(s) 438, 906
Sfr303I CCGCGG 1 cut(s) 985
SfuI TTCGAA 4 cut(s) 533, 539, 545, 551
SgrBI CCGCGG 1 cut(s) 985
SinI GGWCC 2 cut(s) 39, 941
SmaI CCCGGG 1 cut(s) 491
SmlI CTYRAG 1 cut(s) 133
SmoI CTYRAG 1 cut(s) 133
SsiI CCGC 9 cut(s) 191, 444, 845, 937, 982, 984, 987, 1156, 1187
SspMI CTAG 3 cut(s) 92, 167, 290
SstI GAGCTC 1 cut(s) 245
StyD4I CCNGG 5 cut(s) 315, 420, 488, 489, 943
StyI CCWWGG 1 cut(s) 66
TaaI ACNGT 4 cut(s) 460, 613, 891, 910
TaiI ACGT 2 cut(s) 12, 756
TaqI TCGA 6 cut(s) 505, 533, 539, 545, 551, 1135
TatI WGTACW 1 cut(s) 680
TauI GCSGC 3 cut(s) 446, 984, 987
TfiI GAWTC 3 cut(s) 485, 1182, 1195
Tru1I TTAA 2 cut(s) 453, 702
Tru9I TTAA 2 cut(s) 453, 702
TscAI CASTG 2 cut(s) 616, 915
TseFI GTSAC 3 cut(s) 118, 335, 735
TseI GCWGC 3 cut(s) 519, 1043, 1226
Tsp45I GTSAC 3 cut(s) 118, 335, 735
TspDTI ATGAA 4 cut(s) 103, 525, 780, 904
TspGWI ACGGA 2 cut(s) 291, 723
TspMI CCCGGG 1 cut(s) 489
TspRI CASTG 2 cut(s) 616, 915
Van91I CCANNNNNTGG 2 cut(s) 629, 1205
VpaK11BI GGWCC 2 cut(s) 39, 941
XagI CCTNNNNNAGG 1 cut(s) 33
XapI RAATTY 5 cut(s) 535, 541, 547, 553, 1105
XbaI TCTAGA 1 cut(s) 289
XceI RCATGY 2 cut(s) 371, 956
XcmI CCANNNNNNNNNTGG 1 cut(s) 457
XmaI CCCGGG 1 cut(s) 489
XmiI GTMKAC 1 cut(s) 905
XspI CTAG 3 cut(s) 92, 167, 290
ZrmI AGTACT 1 cut(s) 682
Zsp2I ATGCAT 1 cut(s) 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.