RLG00000026392

membrane-associated kinase regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0010886
Physical Location & Seq
Forward (+)
2729769 .. 2730569
801 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026392

Sequence Viewer

Length: 711 bp
ATGGAAACATCTCAGCAACCTCTCTCCATTGAAAGCTTTTCATACAGTTGGTTAGTGAATCTCAAGCCTCCTTCTTTTGAAAGCCTTGACCACTCTCTTAGGACTTCGCTAGATGCATCCGATGAAGCCTCCTTCATTGAGATGGACCCAACAATGCCACCCTCTCAGAGATTCTTTAGGAATTCCCAGCAGGATTTCAAATTTGACTCACAATCTCCTCTCTCTACTCTTGTTCATGCTGATGAACTCATTTCCAATGGTTATCTTTTGCCACTTTCGGTTGATGACCCATTGAAGAATATGGAGTCATATGATGATTATTATGATCAAGCCTCGAATTCCAGTACTGCAAACCTTCCGGTCTCTTCATCAAAAGAAGCTGCTCCAACAGAAAATTCTTCTTCAGATTGCTCTAATTCCGTGAGAAGGTGCAGAAGATTATCAAAAAGAATATTTGAGAAGTACTTGGATTTTCTCAGACCGTTGTACAAAAGGATTAGAGGAGGTCATAAAGCAAATCCTAAAGTAGCTGGGAATCATGTTGATAAAAGGTTCCATTCATCGAAGAACAGCAGAGTGTATTCATCAGAAACTGCACCGCCGCGAATAAGCATAGCTTATTCTGCCCCCGATGATTGGCGAAGGTCCTGTGATTCCGAAAGCTCAATATATGAGGCAGTTCTTCATTGCAAAAGATCCATAGGAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

237

Amino Acids

26.74

Weight (kDa)

6.31

Isoelectric Point (pI)

68.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 604
AciI CCGC 2 cut(s) 599, 602
AclWI GGATC 1 cut(s) 690
AcsI RAATTY 4 cut(s) 181, 200, 337, 394
AcuI CTGAAG 1 cut(s) 387
AfaI GTAC 3 cut(s) 346, 464, 488
AfiI CCNNNNNNNGG 2 cut(s) 426, 636
AgsI TTSAA 4 cut(s) 32, 80, 199, 295
AjuI GAANNNNNNNTTGG 2 cut(s) 379, 411
AluBI AGCT 5 cut(s) 36, 380, 530, 617, 663
AluI AGCT 5 cut(s) 36, 380, 530, 617, 663
Alw26I GTCTC 1 cut(s) 367
AlwI GGATC 1 cut(s) 690
AlwNI CAGNNNCTG 1 cut(s) 593
ApeKI GCWGC 1 cut(s) 380
ApoI RAATTY 4 cut(s) 181, 200, 337, 394
AspS9I GGNCC 2 cut(s) 145, 645
AvaII GGWCC 2 cut(s) 145, 645
BbvI GCAGC 1 cut(s) 367
BccI CCATC 1 cut(s) 136
BclI TGATCA 1 cut(s) 325
BcoDI GTCTC 1 cut(s) 367
BfaI CTAG 1 cut(s) 110
BisI GCNGC 2 cut(s) 381, 602
BlsI GCNGC 2 cut(s) 382, 603
BmcAI AGTACT 2 cut(s) 346, 464
Bme18I GGWCC 2 cut(s) 145, 645
BmgT120I GGNCC 2 cut(s) 145, 645
BmiI GGNNCC 2 cut(s) 147, 554
BmsI GCATC 2 cut(s) 103, 125
BpuEI CTTGAG 1 cut(s) 47
BsaI GGTCTC 1 cut(s) 367
BsaWI WCCGGW 1 cut(s) 358
Bsc4I CCNNNNNNNGG 2 cut(s) 426, 636
Bse1I ACTGG 1 cut(s) 342
Bse3DI GCAATG 1 cut(s) 685
BseGI GGATG 1 cut(s) 116
BseLI CCNNNNNNNGG 2 cut(s) 426, 636
BseMI GCAATG 1 cut(s) 685
BseMII CTCAG 3 cut(s) 26, 179, 490
BseNI ACTGG 1 cut(s) 342
BseRI GAGGAG 2 cut(s) 207, 516
BseXI GCAGC 1 cut(s) 367
BseYI CCCAGC 2 cut(s) 186, 530
BsgI GTGCAG 2 cut(s) 451, 579
Bsh1236I CGCG 1 cut(s) 604
BsiSI CCGG 1 cut(s) 359
BslI CCNNNNNNNGG 2 cut(s) 426, 636
BsmAI GTCTC 1 cut(s) 367
Bso31I GGTCTC 1 cut(s) 367
Bsp1407I TGTACA 1 cut(s) 486
Bsp143I GATC 2 cut(s) 325, 695
BspACI CCGC 2 cut(s) 599, 602
BspCNI CTCAG 3 cut(s) 25, 178, 489
BspFNI CGCG 1 cut(s) 604
BspLI GGNNCC 2 cut(s) 147, 554
BspPI GGATC 1 cut(s) 690
BspTNI GGTCTC 1 cut(s) 367
BsrDI GCAATG 1 cut(s) 685
BsrGI TGTACA 1 cut(s) 486
BsrI ACTGG 1 cut(s) 342
BssMI GATC 2 cut(s) 325, 695
Bst4CI ACNGT 2 cut(s) 47, 483
Bst6I CTCTTC 1 cut(s) 370
BstAUI TGTACA 1 cut(s) 486
BstDEI CTNAG 4 cut(s) 12, 98, 165, 476
BstF5I GGATG 1 cut(s) 116
BstFNI CGCG 1 cut(s) 604
BstKTI GATC 2 cut(s) 328, 698
BstMAI GTCTC 1 cut(s) 367
BstMBI GATC 2 cut(s) 325, 695
BstMWI GCNNNNNNNGC 1 cut(s) 623
BstUI CGCG 1 cut(s) 604
BstV1I GCAGC 1 cut(s) 367
BstX2I RGATCY 1 cut(s) 695
BstYI RGATCY 1 cut(s) 695
BtsCI GGATG 1 cut(s) 116
CaiI CAGNNNCTG 1 cut(s) 593
Cfr13I GGNCC 2 cut(s) 145, 645
Csp6I GTAC 3 cut(s) 345, 463, 487
CviAII CATG 2 cut(s) 236, 539
CviJI RGCY 9 cut(s) 36, 67, 84, 128, 332, 380, 530, 617, 663
CviKI_1 RGCY 9 cut(s) 36, 67, 84, 128, 332, 380, 530, 617, 663
CviQI GTAC 3 cut(s) 345, 463, 487
DdeI CTNAG 4 cut(s) 12, 98, 165, 476
DpnI GATC 2 cut(s) 327, 697
DpnII GATC 2 cut(s) 325, 695
Eam1104I CTCTTC 1 cut(s) 370
EarI CTCTTC 1 cut(s) 370
Eco31I GGTCTC 1 cut(s) 367
Eco47I GGWCC 2 cut(s) 145, 645
Eco57I CTGAAG 1 cut(s) 387
EcoO109I RGGNCCY 1 cut(s) 645
EcoRI GAATTC 2 cut(s) 181, 337
EcoT22I ATGCAT 1 cut(s) 118
FaeI CATG 2 cut(s) 239, 542
FalI AAGNNNNNCTT 2 cut(s) 601, 633
FatI CATG 2 cut(s) 235, 538
FauNDI CATATG 1 cut(s) 310
FbaI TGATCA 1 cut(s) 325
Fnu4HI GCNGC 2 cut(s) 381, 602
FokI GGATG 1 cut(s) 103
Fsp4HI GCNGC 2 cut(s) 381, 602
FspBI CTAG 1 cut(s) 110
GluI GCNGC 2 cut(s) 381, 602
GsaI CCCAGC 2 cut(s) 190, 534
HapII CCGG 1 cut(s) 359
Hin1II CATG 2 cut(s) 239, 542
HindIII AAGCTT 1 cut(s) 34
HinfI GANTC 6 cut(s) 58, 171, 206, 305, 535, 653
HpaII CCGG 1 cut(s) 359
Hpy188I TCNGA 6 cut(s) 121, 168, 406, 479, 589, 658
HpyAV CCTTC 5 cut(s) 81, 142, 365, 420, 636
HpyCH4III ACNGT 2 cut(s) 47, 483
HpyCH4V TGCA 5 cut(s) 116, 350, 432, 596, 690
HpyF10VI GCNNNNNNNGC 1 cut(s) 623
HpyF3I CTNAG 4 cut(s) 12, 98, 165, 476
Hsp92II CATG 2 cut(s) 239, 542
Ksp22I TGATCA 1 cut(s) 325
Kzo9I GATC 2 cut(s) 325, 695
LmnI GCTCC 1 cut(s) 388
LpnPI CCDG 6 cut(s) 176, 200, 355, 372, 516, 661
Lsp1109I GCAGC 1 cut(s) 367
LweI GCATC 2 cut(s) 103, 125
MaeI CTAG 1 cut(s) 110
MalI GATC 2 cut(s) 327, 697
MboI GATC 2 cut(s) 325, 695
MboII GAAGA 7 cut(s) 307, 357, 390, 393, 447, 577, 674
MflI RGATCY 1 cut(s) 695
MluCI AATT 5 cut(s) 181, 200, 337, 394, 415
MlyI GAGTC 2 cut(s) 200, 314
MmeI TCCRAC 1 cut(s) 410
MnlI CCTC 9 cut(s) 30, 78, 139, 172, 228, 343, 494, 497, 667
Mph1103I ATGCAT 1 cut(s) 118
MslI CAYNNNNRTG 2 cut(s) 140, 240
MspI CCGG 1 cut(s) 359
MvnI CGCG 1 cut(s) 604
MwoI GCNNNNNNNGC 1 cut(s) 623
NdeI CATATG 1 cut(s) 310
NdeII GATC 2 cut(s) 325, 695
NlaIII CATG 2 cut(s) 239, 542
NlaIV GGNNCC 2 cut(s) 147, 554
NsiI ATGCAT 1 cut(s) 118
PfeI GAWTC 4 cut(s) 58, 171, 535, 653
PkrI GCNGC 2 cut(s) 382, 603
PleI GAGTC 2 cut(s) 200, 313
PpsI GAGTC 2 cut(s) 200, 313
PpuMI RGGWCCY 1 cut(s) 645
Psp5II RGGWCCY 1 cut(s) 645
PspFI CCCAGC 2 cut(s) 186, 530
PspN4I GGNNCC 2 cut(s) 147, 554
PspPI GGNCC 2 cut(s) 145, 645
PspPPI RGGWCCY 1 cut(s) 645
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 1 cut(s) 695
RsaI GTAC 3 cut(s) 346, 464, 488
RsaNI GTAC 3 cut(s) 345, 463, 487
RseI CAYNNNNRTG 2 cut(s) 140, 240
SatI GCNGC 2 cut(s) 381, 602
Sau3AI GATC 2 cut(s) 325, 695
Sau96I GGNCC 2 cut(s) 145, 645
ScaI AGTACT 2 cut(s) 346, 464
SchI GAGTC 2 cut(s) 200, 314
SfaNI GCATC 2 cut(s) 103, 125
SinI GGWCC 2 cut(s) 145, 645
SmiMI CAYNNNNRTG 2 cut(s) 140, 240
SmlI CTYRAG 1 cut(s) 62
SmoI CTYRAG 1 cut(s) 62
Sse9I AATT 5 cut(s) 181, 200, 337, 394, 415
SsiI CCGC 2 cut(s) 599, 602
SspI AATATT 1 cut(s) 453
SspMI CTAG 1 cut(s) 110
TaaI ACNGT 2 cut(s) 47, 483
TaqI TCGA 2 cut(s) 335, 563
TasI AATT 5 cut(s) 181, 200, 337, 394, 415
TatI WGTACW 3 cut(s) 344, 462, 486
TauI GCSGC 1 cut(s) 604
TfiI GAWTC 4 cut(s) 58, 171, 535, 653
TseI GCWGC 1 cut(s) 380
TspDTI ATGAA 9 cut(s) 30, 124, 138, 224, 258, 357, 549, 573, 674
TspGWI ACGGA 1 cut(s) 409
VpaK11BI GGWCC 2 cut(s) 145, 645
XapI RAATTY 4 cut(s) 181, 200, 337, 394
XspI CTAG 1 cut(s) 110
ZrmI AGTACT 2 cut(s) 346, 464
Zsp2I ATGCAT 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.