Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0007997

Physical Location & Seq

Genomic Coordinates Reverse (-)

5422883 .. 5427912

Gene Structure 5030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026738

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGAACCCGCCCCACCGACGCTACAGCGTCAGCGTCGTCTCTCAGCTCAAATCAGGTTATCGGGTTTCGATTTGGGGAATTTACCATTTGTGTGGTTATTTTGGAGTTTGGTGGGGTTTTCGAGCTGAATTGAAGTCGTCTTGGATCATGATAACATTGAGCTTTGCTGGTCTCCAGTTTTGGACGGAAACGTCGCTAGTTAAACTAAAATCGGAGGGATTACTTGTGGAGAATTTGATTCCGGCGGCCAATGTTGGCCATGTTGTTGATCTGCTTTTGGACTCCTATGCCACTGTTGCACTGCTGGCAAATTTTGTACTCAATGCATTTATTTTACTCGTTCTATCTCTAAAGACTATATTCTTCGGGGAGTTGTATCCTTCTGAAACTCGGAAACTGTTCGAACGCCTTCTCAATTATATAGTTTACAAGGGTACGTTTCTACCACTGGTTATTCCTCCAACAATATATCATGCAGGCCTGTGGTCAGTCTGGTTGATCGTTCTTTGTTCTTTGAAGATGTTTCAAGCTTTGGCTAGAGATCGACTTGAACGATTGAATGCATCTCCTTCAGCTACACCATTGACATATTTTCGTGTGTATTCAGTGTTGTTGTTTGTGTTCACTGTGGACATTTTCTGGATAAGGCTTTGTGTGGTGATATACAGAACACTGGGTTTATCTATGTTTCTCCTGTTATTATTTGAGCCTTTCAGTATTGGATTTGAGACACTGCAGGCTATTTTGGTCCATGGATTTCAGTTACTTGATATATGGCTCCATCATTCAGCATGGAGCGATGCAAATTGTGAAAGATCGAAATTATTTGATACATCAGCAGCTGGTTTGTTGTTGGAATGGAAAGGCAGTCTTACTCGGAATCTGGGTTTTGTCCTAGACATGGCAACATTGTTAATGGCACTTGGTCACTACATGCATATTTGGTGGCTCCATGGCATGGCATTCCATTTTGTGGATGCGATCCTTTTTCTAAACATACGTGCCTTGTTAAGTGCTATTATAAAACGTATAAAAGGGTTCATGAAACTGAGAAAAGCCTTGGGTGCTCTCCATGCAGCCCTTCCAGATGCAACATCTGACGAACTACGAGCTTATGATGATGAATGCGCGATCTGCAGGGAACCTATGGCCAAGGCTAAAAAATTACACTGTAGTCACCTATTTCATCTTCCATGCTTGAGATCTTGGTTGGATCAAGGTTTAAATGAGGTATATTCTTGTCCAACTTGTCGCAAGCCACTGTTTGTAGGCAGACCAGAAAATGAAGCACATCCCCGCCATGAAGAAACTTCGAGTGATGAGCAGCTGGCTCGTCAAATAAGTTCAGGACTTGATAGACAAAATAGTTCTGGACATACACTCCCTACAGGTGTTTTCCCCAATCAGACTCAGAGCCCTGCAGAAGGTCCTTGGAGGACTGCAGGACTGGATCCAAATTGGTTGAACACCTGGCCAAGCCAGGGAGTTGATGGGGCAGGTCCTTCTACTGCTATCGGATCTGTTGGACTGGGGAGAGTACAGATGATGATGAGGCATCTTGCCTCTGTTGGAGAAACCTATGCCCAGACAGCCCTTGATGATGGTGCGTGGAGCCTCTGGCCTATGAATCCGTCTCAAGCTGCCGCAACTGGTCAACCCATTCCTCCTGCTGACGATGGAAGATACCCAGTAGGAACACGCAATTTACATATGAGGTCCCCGTCACGCACTGTGAATGACAACATAGCAAACATACTTGCTATGGCTGAGACAGTACGGGAAGTTTTGCCTCATATGCCCGATGACATAATATTCCAGGATTTGCAGCGGACAAATTCTGTTACAGTTACTGTGAATAATCTTCTCCAAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010363 GO:0010498 GO:0010941 GO:0010942 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031347 GO:0031349 GO:0032446 GO:0034052 GO:0036211 GO:0043067 GO:0043068 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0051603 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071944 GO:0080134 GO:0080135 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

CUE zf-RING_2

Protein Analysis

625

Amino Acids

70.11

Weight (kDa)

7.67

Isoelectric Point (pI)

35.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_SYVN1_N	PF25563	92 - 353	5.4e-19	E3 ubiquitin-protein ligase synoviolin-like, TPR repeats
zf-RING_2	PF13639	374 - 418	3.5e-08	Ring finger domain
zf-C3HC4	PF00097	376 - 417	1.2e-06	Zinc finger, C3HC4 type (RING finger)
CUE	PF02845	588 - 624	1.1e-06	CUE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007997)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25230 AT4G25230 AT4G25230 AT5G51450 AT5G51450
fragaria_vesca	FvH4_7g27570 FvH4_7g27570 FvH4_7g27570
malus_domestica	MD07G1254100.v1.1
prunus_persica	Prupe.2G277400_v2.0.a1
pyrus_communis	pycom01g19350 pycom07g22680
rosa_chinensis	RchiOBHm_Chr1g0374441
rosa_laevigata	RLG00000026738
rosa_multiflora	Rmu_sc0006877.1_g000003 Rmu_ssc0000007.1_g000009
rosa_roxburghii	Rroxscaffold_4G00283490
rosa_rugosa	Rorug01G0382800 Rorug01G0382900
rosa_samantha	Rh1AG393900 Rh1BG358500 Rh1CG371500 Rh1DG389100
rosa_wichuraiana	Rw1G034220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1022
AasI	GACNNNNNNGTC	1 cut(s)	190
Acc36I	ACCTGC	1 cut(s)	1487
AccB7I	CCANNNNNTGG	2 cut(s)	958, 973
AccII	CGCG	1 cut(s)	1130
AciI	CCGC	5 cut(s)	8, 245, 1297, 1644, 1828
AclWI	GGATC	6 cut(s)	152, 976, 1221, 1445, 1458, 1525
AcoI	YGGCCR	4 cut(s)	246, 256, 1149, 1472
AcsI	RAATTY	4 cut(s)	78, 232, 310, 1834
AcuI	CTGAAG	1 cut(s)	555
AfaI	GTAC	4 cut(s)	318, 436, 1539, 1776
AfiI	CCNNNNNNNGG	5 cut(s)	901, 958, 973, 1424, 1481
AgsI	TTSAA	6 cut(s)	133, 517, 527, 551, 559, 1465
AjnI	CCWGG	3 cut(s)	1469, 1479, 1815
AluBI	AGCT	9 cut(s)	46, 125, 162, 530, 575, 842, 1112, 1327, 1640
AluI	AGCT	9 cut(s)	46, 125, 162, 530, 575, 842, 1112, 1327, 1640
Alw21I	GWGCWC	1 cut(s)	1069
Alw26I	GTCTC	5 cut(s)	43, 176, 722, 1638, 1763
AlwI	GGATC	6 cut(s)	152, 976, 1221, 1445, 1458, 1525
AlwNI	CAGNNNCTG	2 cut(s)	842, 1850
AoxI	GGCC	6 cut(s)	246, 256, 478, 1149, 1472, 1619
ApeKI	GCWGC	5 cut(s)	839, 1076, 1324, 1640, 1825
ApoI	RAATTY	4 cut(s)	78, 232, 310, 1834
Asp700I	GAANNNNTTC	2 cut(s)	398, 408
AspLEI	GCGC	1 cut(s)	1130
AspS9I	GGNCC	4 cut(s)	748, 1427, 1499, 1716
AsuHPI	GGTGA	2 cut(s)	670, 1169
AsuII	TTCGAA	1 cut(s)	402
AvaII	GGWCC	4 cut(s)	748, 1427, 1499, 1716
BalI	TGGCCA	3 cut(s)	258, 1151, 1474
BamHI	GGATCC	1 cut(s)	1450
BanII	GRGCYC	1 cut(s)	1418
Bbv12I	GWGCWC	1 cut(s)	1069
BbvI	GCAGC	5 cut(s)	851, 1088, 1336, 1627, 1837
BccI	CCATC	4 cut(s)	789, 1484, 1595, 1670
BcgI	CGANNNNNNTGC	2 cut(s)	1313, 1347
BciT130I	CCWGG	3 cut(s)	1471, 1481, 1817
BciVI	GTATCC	1 cut(s)	387
BcoDI	GTCTC	5 cut(s)	43, 176, 722, 1638, 1763
BfaI	CTAG	3 cut(s)	197, 537, 896
BfmI	CTRYAG	7 cut(s)	22, 734, 1135, 1171, 1386, 1419, 1440
BfuAI	ACCTGC	1 cut(s)	1487
BfuI	GTATCC	1 cut(s)	387
BglII	AGATCT	1 cut(s)	1202
BisI	GCNGC	7 cut(s)	246, 840, 1077, 1325, 1641, 1644, 1826
BlsI	GCNGC	7 cut(s)	247, 841, 1078, 1326, 1642, 1645, 1827
Bme1390I	CCNGG	3 cut(s)	1471, 1481, 1817
Bme18I	GGWCC	4 cut(s)	748, 1427, 1499, 1716
BmgT120I	GGNCC	4 cut(s)	748, 1427, 1499, 1716
BmiI	GGNNCC	6 cut(s)	779, 950, 1143, 1452, 1613, 1718
BmrFI	CCNGG	3 cut(s)	1471, 1481, 1817
BmrI	ACTGGG	3 cut(s)	683, 1538, 1682
BmsI	GCATC	5 cut(s)	572, 790, 967, 1078, 1564
BmuI	ACTGGG	3 cut(s)	683, 1538, 1682
BpmI	CTGGAG	1 cut(s)	158
Bpu14I	TTCGAA	1 cut(s)	402
BpuEI	CTTGAG	2 cut(s)	1219, 1620
BsaAI	YACGTR	1 cut(s)	1001
BsaI	GGTCTC	1 cut(s)	176
BsaJI	CCNNGG	6 cut(s)	751, 952, 1059, 1152, 1430, 1480
BsaXI	ACNNNNNCTCC	2 cut(s)	1365, 1395
Bsc4I	CCNNNNNNNGG	5 cut(s)	901, 958, 973, 1424, 1481
Bse1I	ACTGG	7 cut(s)	175, 453, 678, 1452, 1533, 1654, 1688
BseBI	CCWGG	3 cut(s)	1471, 1481, 1817
BseDI	CCNNGG	6 cut(s)	751, 952, 1059, 1152, 1430, 1480
BseGI	GGATG	2 cut(s)	982, 1291
BseLI	CCNNNNNNNGG	5 cut(s)	901, 958, 973, 1424, 1481
BseMII	CTCAG	4 cut(s)	56, 1040, 1424, 1758
BseNI	ACTGG	7 cut(s)	175, 453, 678, 1452, 1533, 1654, 1688
BseXI	GCAGC	5 cut(s)	851, 1088, 1336, 1627, 1837
Bsh1236I	CGCG	1 cut(s)	1130
BshFI	GGCC	6 cut(s)	248, 258, 480, 1151, 1474, 1621
BsiHKAI	GWGCWC	1 cut(s)	1069
BsiSI	CCGG	1 cut(s)	242
BslFI	GGGAC	1 cut(s)	1702
BslI	CCNNNNNNNGG	5 cut(s)	901, 958, 973, 1424, 1481
BsmAI	GTCTC	5 cut(s)	43, 176, 722, 1638, 1763
BsmBI	CGTCTC	2 cut(s)	43, 1638
BsmFI	GGGAC	1 cut(s)	1702
BsmI	GAATGC	3 cut(s)	565, 962, 1130
BsnI	GGCC	6 cut(s)	248, 258, 480, 1151, 1474, 1621
Bso31I	GGTCTC	1 cut(s)	176
Bsp119I	TTCGAA	1 cut(s)	402
Bsp1286I	GDGCHC	2 cut(s)	1069, 1418
Bsp19I	CCATGG	2 cut(s)	751, 952
BspACI	CCGC	5 cut(s)	8, 245, 1297, 1644, 1828
BspANI	GGCC	6 cut(s)	248, 258, 480, 1151, 1474, 1621
BspCNI	CTCAG	4 cut(s)	55, 1041, 1423, 1759
BspFNI	CGCG	1 cut(s)	1130
BspHI	TCATGA	2 cut(s)	147, 1041
BspLI	GGNNCC	6 cut(s)	779, 950, 1143, 1452, 1613, 1718
BspMAI	CTGCAG	4 cut(s)	738, 1139, 1423, 1444
BspMI	ACCTGC	1 cut(s)	1487
BspPI	GGATC	6 cut(s)	152, 976, 1221, 1445, 1458, 1525
BspT104I	TTCGAA	1 cut(s)	402
BspTNI	GGTCTC	1 cut(s)	176
BsrI	ACTGG	7 cut(s)	175, 453, 678, 1452, 1533, 1654, 1688
BssECI	CCNNGG	6 cut(s)	751, 952, 1059, 1152, 1430, 1480
BssT1I	CCWWGG	5 cut(s)	751, 952, 1059, 1152, 1430
Bst2UI	CCWGG	3 cut(s)	1471, 1481, 1817
Bst4CI	ACNGT	9 cut(s)	295, 399, 628, 1172, 1263, 1732, 1774, 1846, 1852
BstBAI	YACGTR	1 cut(s)	1001
BstBI	TTCGAA	1 cut(s)	402
BstC8I	GCNNGC	5 cut(s)	306, 478, 738, 1256, 1329
BstDEI	CTNAG	4 cut(s)	42, 1049, 1410, 1767
BstDSI	CCRYGG	2 cut(s)	751, 952
BstENI	CCTNNNNNAGG	1 cut(s)	1422
BstF5I	GGATG	2 cut(s)	982, 1291
BstFNI	CGCG	1 cut(s)	1130
BstHHI	GCGC	1 cut(s)	1130
BstMAI	GTCTC	5 cut(s)	43, 176, 722, 1638, 1763
BstMWI	GCNNNNNNNGC	7 cut(s)	296, 305, 1064, 1073, 1134, 1589, 1795
BstNI	CCWGG	3 cut(s)	1471, 1481, 1817
BstNSI	RCATGY	1 cut(s)	937
BstSCI	CCNGG	3 cut(s)	1469, 1479, 1815
BstSFI	CTRYAG	7 cut(s)	22, 734, 1135, 1171, 1386, 1419, 1440
BstUI	CGCG	1 cut(s)	1130
BstV1I	GCAGC	5 cut(s)	851, 1088, 1336, 1627, 1837
BstX2I	RGATCY	3 cut(s)	1202, 1450, 1517
BstXI	CCANNNNNNTGG	1 cut(s)	92
BstYI	RGATCY	3 cut(s)	1202, 1450, 1517
BsuI	GTATCC	1 cut(s)	387
BsuRI	GGCC	6 cut(s)	248, 258, 480, 1151, 1474, 1621
BtgI	CCRYGG	2 cut(s)	751, 952
BtgZI	GCGATG	1 cut(s)	813
BtsCI	GGATG	2 cut(s)	982, 1291
BtsI	GCAGTG	2 cut(s)	299, 731
BveI	ACCTGC	1 cut(s)	1487
Cac8I	GCNNGC	5 cut(s)	306, 478, 738, 1256, 1329
CaiI	CAGNNNCTG	2 cut(s)	842, 1850
CciI	TCATGA	2 cut(s)	147, 1041
CfoI	GCGC	1 cut(s)	1130
Cfr13I	GGNCC	4 cut(s)	748, 1427, 1499, 1716
CseI	GACGC	3 cut(s)	16, 22, 27
Csp6I	GTAC	4 cut(s)	317, 435, 1538, 1775
CviQI	GTAC	4 cut(s)	317, 435, 1538, 1775
DdeI	CTNAG	4 cut(s)	42, 1049, 1410, 1767
DraI	TTTAAA	1 cut(s)	1224
DrdI	GACNNNNNNGTC	1 cut(s)	190
DseDI	GACNNNNNNGTC	1 cut(s)	190
EaeI	YGGCCR	4 cut(s)	246, 256, 1149, 1472
Eco130I	CCWWGG	5 cut(s)	751, 952, 1059, 1152, 1430
Eco147I	AGGCCT	1 cut(s)	480
Eco24I	GRGCYC	1 cut(s)	1418
Eco31I	GGTCTC	1 cut(s)	176
Eco47I	GGWCC	4 cut(s)	748, 1427, 1499, 1716
Eco57I	CTGAAG	1 cut(s)	555
EcoNI	CCTNNNNNAGG	1 cut(s)	1422
EcoO109I	RGGNCCY	3 cut(s)	1427, 1499, 1716
EcoRII	CCWGG	3 cut(s)	1469, 1479, 1815
EcoT14I	CCWWGG	5 cut(s)	751, 952, 1059, 1152, 1430
EcoT22I	ATGCAT	3 cut(s)	328, 565, 939
EcoT38I	GRGCYC	1 cut(s)	1418
ErhI	CCWWGG	5 cut(s)	751, 952, 1059, 1152, 1430
Esp3I	CGTCTC	2 cut(s)	43, 1638
FalI	AAGNNNNNCTT	2 cut(s)	855, 887
FaqI	GGGAC	1 cut(s)	1702
FauI	CCCGC	2 cut(s)	15, 1304
FauNDI	CATATG	2 cut(s)	1710, 1794
Fnu4HI	GCNGC	7 cut(s)	246, 840, 1077, 1325, 1641, 1644, 1826
FokI	GGATG	2 cut(s)	989, 1278
FriOI	GRGCYC	1 cut(s)	1418
Fsp4HI	GCNGC	7 cut(s)	246, 840, 1077, 1325, 1641, 1644, 1826
FspBI	CTAG	3 cut(s)	197, 537, 896
GlaI	GCGC	1 cut(s)	1129
GluI	GCNGC	7 cut(s)	246, 840, 1077, 1325, 1641, 1644, 1826
GsuI	CTGGAG	1 cut(s)	158
HaeIII	GGCC	6 cut(s)	248, 258, 480, 1151, 1474, 1621
HapII	CCGG	1 cut(s)	242
HgaI	GACGC	3 cut(s)	16, 22, 27
HhaI	GCGC	1 cut(s)	1130
Hin6I	GCGC	1 cut(s)	1128
HinP1I	GCGC	1 cut(s)	1128
HincII	GTYRAC	1 cut(s)	1655
HindII	GTYRAC	1 cut(s)	1655
HindIII	AAGCTT	1 cut(s)	528
HinfI	GANTC	5 cut(s)	238, 281, 880, 1408, 1627
HpaII	CCGG	1 cut(s)	242
HphI	GGTGA	2 cut(s)	670, 1169
Hpy166II	GTNNAC	4 cut(s)	427, 624, 631, 1655
Hpy188I	TCNGA	8 cut(s)	214, 385, 393, 879, 1099, 1407, 1413, 1517
Hpy188III	TCNNGA	6 cut(s)	148, 640, 1042, 1085, 1347, 1371
Hpy8I	GTNNAC	4 cut(s)	427, 624, 631, 1655
Hpy99I	CGWCG	3 cut(s)	21, 38, 196
HpyAV	CCTTC	6 cut(s)	390, 419, 579, 1091, 1418, 1512
HpyCH4III	ACNGT	9 cut(s)	295, 399, 628, 1172, 1263, 1732, 1774, 1846, 1852
HpyCH4IV	ACGT	4 cut(s)	191, 437, 1000, 1027
HpyF10VI	GCNNNNNNNGC	7 cut(s)	296, 305, 1064, 1073, 1134, 1589, 1795
HpyF3I	CTNAG	4 cut(s)	42, 1049, 1410, 1767
HpySE526I	ACGT	4 cut(s)	191, 437, 1000, 1027
HspAI	GCGC	1 cut(s)	1128
LmnI	GCTCC	4 cut(s)	783, 795, 954, 1611
Lsp1109I	GCAGC	5 cut(s)	851, 1088, 1336, 1627, 1837
LweI	GCATC	5 cut(s)	572, 790, 967, 1078, 1564
MaeI	CTAG	3 cut(s)	197, 537, 896
MaeII	ACGT	4 cut(s)	191, 437, 1000, 1027
MaeIII	GTNAC	6 cut(s)	762, 926, 1175, 1722, 1840, 1846
MboII	GAAGA	6 cut(s)	355, 529, 1181, 1316, 1692, 1853
MflI	RGATCY	3 cut(s)	1202, 1450, 1517
MhlI	GDGCHC	2 cut(s)	1069, 1418
MlsI	TGGCCA	3 cut(s)	258, 1151, 1474
MluNI	TGGCCA	3 cut(s)	258, 1151, 1474
MlyI	GAGTC	2 cut(s)	275, 1402
MmeI	TCCRAC	6 cut(s)	485, 834, 1191, 1268, 1504, 1549
Mox20I	TGGCCA	3 cut(s)	258, 1151, 1474
Mph1103I	ATGCAT	3 cut(s)	328, 565, 939
MroXI	GAANNNNTTC	2 cut(s)	398, 408
MscI	TGGCCA	3 cut(s)	258, 1151, 1474
MseI	TTAA	4 cut(s)	201, 914, 1010, 1223
MslI	CAYNNNNRTG	1 cut(s)	90
Msp20I	TGGCCA	3 cut(s)	258, 1151, 1474
MspA1I	CMGCKG	3 cut(s)	842, 1327, 1828
MspI	CCGG	1 cut(s)	242
MspR9I	CCNGG	3 cut(s)	1471, 1481, 1817
Mva1269I	GAATGC	3 cut(s)	565, 962, 1130
MvaI	CCWGG	3 cut(s)	1471, 1481, 1817
MvnI	CGCG	1 cut(s)	1130
MwoI	GCNNNNNNNGC	7 cut(s)	296, 305, 1064, 1073, 1134, 1589, 1795
NcoI	CCATGG	2 cut(s)	751, 952
NdeI	CATATG	2 cut(s)	1710, 1794
NlaIV	GGNNCC	6 cut(s)	779, 950, 1143, 1452, 1613, 1718
NmuCI	GTSAC	3 cut(s)	926, 1175, 1722
NsiI	ATGCAT	3 cut(s)	328, 565, 939
NspI	RCATGY	1 cut(s)	937
NspV	TTCGAA	1 cut(s)	402
PagI	TCATGA	2 cut(s)	147, 1041
PceI	AGGCCT	1 cut(s)	480
PcsI	WCGNNNNNNNCGW	1 cut(s)	550
PctI	GAATGC	3 cut(s)	565, 962, 1130
PdmI	GAANNNNTTC	2 cut(s)	398, 408
PfeI	GAWTC	3 cut(s)	238, 880, 1627
PflMI	CCANNNNNTGG	2 cut(s)	958, 973
PfoI	TCCNGGA	1 cut(s)	1815
PkrI	GCNGC	7 cut(s)	247, 841, 1078, 1326, 1642, 1645, 1827
PleI	GAGTC	2 cut(s)	275, 1402
PpsI	GAGTC	2 cut(s)	275, 1402
Ppu21I	YACGTR	1 cut(s)	1001
PpuMI	RGGWCCY	3 cut(s)	1427, 1499, 1716
PsiI	TTATAA	1 cut(s)	1022
Psp5II	RGGWCCY	3 cut(s)	1427, 1499, 1716
Psp6I	CCWGG	3 cut(s)	1469, 1479, 1815
PspGI	CCWGG	3 cut(s)	1469, 1479, 1815
PspN4I	GGNNCC	6 cut(s)	779, 950, 1143, 1452, 1613, 1718
PspPI	GGNCC	4 cut(s)	748, 1427, 1499, 1716
PspPPI	RGGWCCY	3 cut(s)	1427, 1499, 1716
PstI	CTGCAG	4 cut(s)	738, 1139, 1423, 1444
PstNI	CAGNNNCTG	2 cut(s)	842, 1850
PsuI	RGATCY	3 cut(s)	1202, 1450, 1517
PvuII	CAGCTG	2 cut(s)	842, 1327
RsaI	GTAC	4 cut(s)	318, 436, 1539, 1776
RsaNI	GTAC	4 cut(s)	317, 435, 1538, 1775
RseI	CAYNNNNRTG	1 cut(s)	90
SaqAI	TTAA	4 cut(s)	201, 914, 1010, 1223
SatI	GCNGC	7 cut(s)	246, 840, 1077, 1325, 1641, 1644, 1826
Sau96I	GGNCC	4 cut(s)	748, 1427, 1499, 1716
SchI	GAGTC	2 cut(s)	275, 1402
ScrFI	CCNGG	3 cut(s)	1471, 1481, 1817
SduI	GDGCHC	2 cut(s)	1069, 1418
SfaNI	GCATC	5 cut(s)	572, 790, 967, 1078, 1564
SfcI	CTRYAG	7 cut(s)	22, 734, 1135, 1171, 1386, 1419, 1440
SfuI	TTCGAA	1 cut(s)	402
SinI	GGWCC	4 cut(s)	748, 1427, 1499, 1716
SmiMI	CAYNNNNRTG	1 cut(s)	90
SmlI	CTYRAG	2 cut(s)	1198, 1635
SmoI	CTYRAG	2 cut(s)	1198, 1635
SseBI	AGGCCT	1 cut(s)	480
SsiI	CCGC	5 cut(s)	8, 245, 1297, 1644, 1828
SspI	AATATT	1 cut(s)	1812
SspMI	CTAG	3 cut(s)	197, 537, 896
StuI	AGGCCT	1 cut(s)	480
StyD4I	CCNGG	3 cut(s)	1469, 1479, 1815
StyI	CCWWGG	5 cut(s)	751, 952, 1059, 1152, 1430
TaaI	ACNGT	9 cut(s)	295, 399, 628, 1172, 1263, 1732, 1774, 1846, 1852
TaiI	ACGT	4 cut(s)	194, 440, 1003, 1030
TaqI	TCGA	6 cut(s)	68, 121, 402, 544, 818, 1313
TatI	WGTACW	2 cut(s)	316, 1537
TauI	GCSGC	2 cut(s)	248, 1646
TfiI	GAWTC	3 cut(s)	238, 880, 1627
Tru1I	TTAA	4 cut(s)	201, 914, 1010, 1223
Tru9I	TTAA	4 cut(s)	201, 914, 1010, 1223
TseFI	GTSAC	3 cut(s)	926, 1175, 1722
TseI	GCWGC	5 cut(s)	839, 1076, 1324, 1640, 1825
Tsp45I	GTSAC	3 cut(s)	926, 1175, 1722
TspDTI	ATGAA	8 cut(s)	17, 1030, 1058, 1137, 1175, 1299, 1317, 1640
TspGWI	ACGGA	2 cut(s)	200, 1620
Van91I	CCANNNNNTGG	2 cut(s)	958, 973
VpaK11BI	GGWCC	4 cut(s)	748, 1427, 1499, 1716
XagI	CCTNNNNNAGG	1 cut(s)	1422
XapI	RAATTY	4 cut(s)	78, 232, 310, 1834
XceI	RCATGY	1 cut(s)	937
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1487
XmnI	GAANNNNTTC	2 cut(s)	398, 408
XspI	CTAG	3 cut(s)	197, 537, 896
Zsp2I	ATGCAT	3 cut(s)	328, 565, 939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.