Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0007997

Physical Location & Seq

Genomic Coordinates Forward (+)

64141721 .. 64147124

Gene Structure 5404 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG371500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGCCTGTTTCTAATTTACAGACTATATTTTTCGGGGAGTTGTATCCTTCTGAAACTCGGAAACTGTTCGAACGCCTTCTCAATTATATAGTTTACAAGGGTACGTTTCTACCACTGGTTATTCCTCCAACGATATATCATGCAGGCCTGTGGTCAGTCTGGTTGATCGTTCTTTGTTCTTTAAAGATGTTTCAAGCTTTGGCTAGAGATCGACTTGAACGATTGAATGCATCTCCTTCAGCTACACCATTGACATATTTTCGTGTGTATTCAGTGTTGTTGTTTGTGTTCACTGTGGACATTTTCTGGATAAGGCTTTGTGTGGTGATATACAGAACACTGGGTTTATCTATGTTTCTCCTGTTATTATTTGAGCCTTTCAGTATTGGATTTGAGACACTGCAGGCTATTTTGGTCCATGGATTTCAGTTACTTGATATATGGCTCCACCATTCAGCATGGAGCGATGCAAATTGTGAAAGATCGAAATTATTTGATACATCAGCAGCTGGTTTGTTGTTGGAATGGAAAGGCAGTCTTACTCGGAATCTGGGTTTTGTCCTAGACATGGCAACATTGTTAATGGCACTTGGTCACTACGTGCATATTTGGTGGCTCCACGGCATGGCATTCCATTTTGTGGATGCGATCCTTTTTCTAAACATACGTGCCTTGTTAAGTGCTATTATAAAACGTATAAAAGGGTTCATGAAACTGAGAAAAGCCTTGGGTGCTCTCCATGCAGCCCTTCCAGATGCAACATCTGACGAACTACGAGCTTATGATGATGAATGTGCGATCTGCAGGGAACCTATGGCCAAGGCTAAAAAATTACACTGCAGTCACCTATTTCATCTTCCATGCTTGAGATCTTGGTTGGATCAAGGTTTAAATGAGGTATATTCTTGTCCAACTTGTCGCAAACCACTGTTTGTAGGCAGACCAGAAAATGAAGCACATCCCCGCCATGAAGAAACTTCGAGTGATGAGCAGCTGGCTCGTCAAATAAGTTCAGGACTTGATAGACAAAATAGTTCTGGACATACACTCCCTACAGGTGTTTTCCCCAATCAGACTCAGAGCCCTGCAGAAGGTCCTTGGAGGACTGCAGGACTGGATCCAAATTGGTTGAACACCTGGCCAAGCCAGGGAGTTGATGGGGCTGGTCCTTCTACTGCTATCGGATCTGTTGGACTGGGGAGAGTACAGATGATGATGAGGCATCTTGCCTCTGTTGGAGAAACCTATGCCCAGACAGCCCTTGAAGATGGTGCGTGGAGCCTCTGGCCTATGAATCCGTCTCAAGCTGCCGCAACTGGTCAACCCATTCCTCCTGCTGACGATGGAAGATACCCAGTAGGAACTCGCAATTTACATATGAGGTCCCCCTCACGCACTGTGAATGACAACATAGCAAACATACTTGCTATGGCCGAGACAGTACGGGAAGTTTTGCCTCATATGCCCGATGACATAATATTCCAGGATTTGCAGCGGACAAATTCTGTTACAGTTACTGTGAATAATCTTCTCCAAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010363 GO:0010498 GO:0010941 GO:0010942 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031347 GO:0031349 GO:0032446 GO:0034052 GO:0036211 GO:0043067 GO:0043068 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0051603 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071944 GO:0080134 GO:0080135 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

CUE zf-RING_2

Protein Analysis

513

Amino Acids

57.62

Weight (kDa)

6.81

Isoelectric Point (pI)

39.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_SYVN1_N	PF25563	6 - 242	7.7e-17	E3 ubiquitin-protein ligase synoviolin-like, TPR repeats
zf-RING_2	PF13639	263 - 307	2.7e-08	Ring finger domain
zf-C3HC4	PF00097	265 - 306	9.6e-07	Zinc finger, C3HC4 type (RING finger)
CUE	PF02845	477 - 513	8.6e-07	CUE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007997)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25230 AT4G25230 AT4G25230 AT5G51450 AT5G51450
fragaria_vesca	FvH4_7g27570 FvH4_7g27570 FvH4_7g27570
malus_domestica	MD07G1254100.v1.1
prunus_persica	Prupe.2G277400_v2.0.a1
pyrus_communis	pycom01g19350 pycom07g22680
rosa_chinensis	RchiOBHm_Chr1g0374441
rosa_laevigata	RLG00000026738
rosa_multiflora	Rmu_sc0006877.1_g000003 Rmu_ssc0000007.1_g000009
rosa_roxburghii	Rroxscaffold_4G00283490
rosa_rugosa	Rorug01G0382800 Rorug01G0382900
rosa_samantha	Rh1AG393900 Rh1BG358500 Rh1CG371500 Rh1DG389100
rosa_wichuraiana	Rw1G034220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	689
AccB7I	CCANNNNNTGG	2 cut(s)	625, 640
AciI	CCGC	3 cut(s)	964, 1311, 1495
AclWI	GGATC	5 cut(s)	643, 888, 1112, 1125, 1192
AcoI	YGGCCR	3 cut(s)	816, 1139, 1431
AcsI	RAATTY	1 cut(s)	1501
AcuI	CTGAAG	1 cut(s)	222
AdeI	CACNNNGTG	1 cut(s)	601
AfaI	GTAC	3 cut(s)	103, 1206, 1443
AfiI	CCNNNNNNNGG	5 cut(s)	568, 625, 640, 1091, 1148
AgsI	TTSAA	5 cut(s)	194, 218, 226, 1132, 1265
AjnI	CCWGG	3 cut(s)	1136, 1146, 1482
AluBI	AGCT	6 cut(s)	197, 242, 509, 779, 994, 1307
AluI	AGCT	6 cut(s)	197, 242, 509, 779, 994, 1307
Alw21I	GWGCWC	1 cut(s)	736
Alw26I	GTCTC	3 cut(s)	389, 1305, 1430
AlwI	GGATC	5 cut(s)	643, 888, 1112, 1125, 1192
AlwNI	CAGNNNCTG	2 cut(s)	509, 1517
AoxI	GGCC	5 cut(s)	145, 816, 1139, 1286, 1431
ApeKI	GCWGC	5 cut(s)	506, 743, 991, 1307, 1492
ApoI	RAATTY	1 cut(s)	1501
Asp700I	GAANNNNTTC	2 cut(s)	65, 75
AspS9I	GGNCC	4 cut(s)	415, 1094, 1166, 1383
AsuHPI	GGTGA	2 cut(s)	337, 836
AsuII	TTCGAA	1 cut(s)	69
AvaII	GGWCC	4 cut(s)	415, 1094, 1166, 1383
BalI	TGGCCA	2 cut(s)	818, 1141
BamHI	GGATCC	1 cut(s)	1117
BanII	GRGCYC	1 cut(s)	1085
Bbv12I	GWGCWC	1 cut(s)	736
BbvI	GCAGC	5 cut(s)	518, 755, 1003, 1294, 1504
BccI	CCATC	3 cut(s)	1151, 1262, 1337
BceAI	ACGGC	1 cut(s)	637
BcgI	CGANNNNNNTGC	2 cut(s)	980, 1014
BciT130I	CCWGG	3 cut(s)	1138, 1148, 1484
BciVI	GTATCC	1 cut(s)	54
BcoDI	GTCTC	3 cut(s)	389, 1305, 1430
BfaI	CTAG	2 cut(s)	204, 563
BfmI	CTRYAG	6 cut(s)	401, 802, 838, 1053, 1086, 1107
BfuI	GTATCC	1 cut(s)	54
BglII	AGATCT	1 cut(s)	869
BisI	GCNGC	6 cut(s)	507, 744, 992, 1308, 1311, 1493
BlsI	GCNGC	6 cut(s)	508, 745, 993, 1309, 1312, 1494
Bme1390I	CCNGG	3 cut(s)	1138, 1148, 1484
Bme18I	GGWCC	4 cut(s)	415, 1094, 1166, 1383
BmgT120I	GGNCC	4 cut(s)	415, 1094, 1166, 1383
BmiI	GGNNCC	6 cut(s)	446, 617, 810, 1119, 1280, 1385
BmrFI	CCNGG	3 cut(s)	1138, 1148, 1484
BmrI	ACTGGG	3 cut(s)	350, 1205, 1349
BmsI	GCATC	5 cut(s)	239, 457, 634, 745, 1231
BmuI	ACTGGG	3 cut(s)	350, 1205, 1349
Bpu14I	TTCGAA	1 cut(s)	69
BpuEI	CTTGAG	2 cut(s)	886, 1287
BsaAI	YACGTR	2 cut(s)	601, 668
BsaJI	CCNNGG	6 cut(s)	418, 619, 726, 819, 1097, 1147
BsaXI	ACNNNNNCTCC	2 cut(s)	1032, 1062
Bsc4I	CCNNNNNNNGG	5 cut(s)	568, 625, 640, 1091, 1148
Bse1I	ACTGG	6 cut(s)	120, 345, 1119, 1200, 1321, 1355
BseBI	CCWGG	3 cut(s)	1138, 1148, 1484
BseDI	CCNNGG	6 cut(s)	418, 619, 726, 819, 1097, 1147
BseGI	GGATG	2 cut(s)	649, 958
BseLI	CCNNNNNNNGG	5 cut(s)	568, 625, 640, 1091, 1148
BseMII	CTCAG	2 cut(s)	707, 1091
BseNI	ACTGG	6 cut(s)	120, 345, 1119, 1200, 1321, 1355
BseXI	GCAGC	5 cut(s)	518, 755, 1003, 1294, 1504
BshFI	GGCC	5 cut(s)	147, 818, 1141, 1288, 1433
BsiHKAI	GWGCWC	1 cut(s)	736
BslFI	GGGAC	1 cut(s)	1369
BslI	CCNNNNNNNGG	5 cut(s)	568, 625, 640, 1091, 1148
BsmAI	GTCTC	3 cut(s)	389, 1305, 1430
BsmBI	CGTCTC	1 cut(s)	1305
BsmFI	GGGAC	1 cut(s)	1369
BsmI	GAATGC	2 cut(s)	232, 629
BsnI	GGCC	5 cut(s)	147, 818, 1141, 1288, 1433
Bsp119I	TTCGAA	1 cut(s)	69
Bsp1286I	GDGCHC	2 cut(s)	736, 1085
Bsp143I	GATC	9 cut(s)	165, 208, 482, 648, 798, 869, 880, 1117, 1184
Bsp19I	CCATGG	1 cut(s)	418
BspACI	CCGC	3 cut(s)	964, 1311, 1495
BspANI	GGCC	5 cut(s)	147, 818, 1141, 1288, 1433
BspCNI	CTCAG	2 cut(s)	708, 1090
BspHI	TCATGA	1 cut(s)	708
BspLI	GGNNCC	6 cut(s)	446, 617, 810, 1119, 1280, 1385
BspMAI	CTGCAG	5 cut(s)	405, 806, 842, 1090, 1111
BspPI	GGATC	5 cut(s)	643, 888, 1112, 1125, 1192
BspT104I	TTCGAA	1 cut(s)	69
BsrI	ACTGG	6 cut(s)	120, 345, 1119, 1200, 1321, 1355
BssECI	CCNNGG	6 cut(s)	418, 619, 726, 819, 1097, 1147
BssMI	GATC	9 cut(s)	165, 208, 482, 648, 798, 869, 880, 1117, 1184
BssT1I	CCWWGG	4 cut(s)	418, 726, 819, 1097
Bst2UI	CCWGG	3 cut(s)	1138, 1148, 1484
Bst4CI	ACNGT	7 cut(s)	66, 295, 930, 1399, 1441, 1513, 1519
BstBAI	YACGTR	2 cut(s)	601, 668
BstBI	TTCGAA	1 cut(s)	69
BstC8I	GCNNGC	3 cut(s)	145, 405, 996
BstDEI	CTNAG	2 cut(s)	716, 1077
BstDSI	CCRYGG	2 cut(s)	418, 619
BstENI	CCTNNNNNAGG	1 cut(s)	1089
BstF5I	GGATG	2 cut(s)	649, 958
BstKTI	GATC	9 cut(s)	168, 211, 485, 651, 801, 872, 883, 1120, 1187
BstMAI	GTCTC	3 cut(s)	389, 1305, 1430
BstMBI	GATC	9 cut(s)	165, 208, 482, 648, 798, 869, 880, 1117, 1184
BstMWI	GCNNNNNNNGC	4 cut(s)	731, 740, 1256, 1462
BstNI	CCWGG	3 cut(s)	1138, 1148, 1484
BstSCI	CCNGG	3 cut(s)	1136, 1146, 1482
BstSFI	CTRYAG	6 cut(s)	401, 802, 838, 1053, 1086, 1107
BstV1I	GCAGC	5 cut(s)	518, 755, 1003, 1294, 1504
BstX2I	RGATCY	3 cut(s)	869, 1117, 1184
BstYI	RGATCY	3 cut(s)	869, 1117, 1184
BsuI	GTATCC	1 cut(s)	54
BsuRI	GGCC	5 cut(s)	147, 818, 1141, 1288, 1433
BtgI	CCRYGG	2 cut(s)	418, 619
BtgZI	GCGATG	1 cut(s)	480
BtsCI	GGATG	2 cut(s)	649, 958
BtsI	GCAGTG	2 cut(s)	398, 835
BtsIMutI	CAGTG	8 cut(s)	113, 279, 291, 338, 398, 835, 926, 1395
Cac8I	GCNNGC	3 cut(s)	145, 405, 996
CaiI	CAGNNNCTG	2 cut(s)	509, 1517
CciI	TCATGA	1 cut(s)	708
Cfr13I	GGNCC	4 cut(s)	415, 1094, 1166, 1383
Csp6I	GTAC	3 cut(s)	102, 1205, 1442
CviAII	CATG	9 cut(s)	140, 419, 459, 568, 625, 709, 740, 861, 968
CviQI	GTAC	3 cut(s)	102, 1205, 1442
DdeI	CTNAG	2 cut(s)	716, 1077
DpnI	GATC	9 cut(s)	167, 210, 484, 650, 800, 871, 882, 1119, 1186
DpnII	GATC	9 cut(s)	165, 208, 482, 648, 798, 869, 880, 1117, 1184
DraI	TTTAAA	2 cut(s)	183, 891
DraIII	CACNNNGTG	1 cut(s)	601
EaeI	YGGCCR	3 cut(s)	816, 1139, 1431
Eco130I	CCWWGG	4 cut(s)	418, 726, 819, 1097
Eco147I	AGGCCT	1 cut(s)	147
Eco24I	GRGCYC	1 cut(s)	1085
Eco47I	GGWCC	4 cut(s)	415, 1094, 1166, 1383
Eco57I	CTGAAG	1 cut(s)	222
EcoNI	CCTNNNNNAGG	1 cut(s)	1089
EcoO109I	RGGNCCY	2 cut(s)	1094, 1383
EcoRII	CCWGG	3 cut(s)	1136, 1146, 1482
EcoT14I	CCWWGG	4 cut(s)	418, 726, 819, 1097
EcoT22I	ATGCAT	1 cut(s)	232
EcoT38I	GRGCYC	1 cut(s)	1085
ErhI	CCWWGG	4 cut(s)	418, 726, 819, 1097
Esp3I	CGTCTC	1 cut(s)	1305
FaeI	CATG	9 cut(s)	143, 422, 462, 571, 628, 712, 743, 864, 971
FalI	AAGNNNNNCTT	2 cut(s)	522, 554
FaqI	GGGAC	1 cut(s)	1369
FatI	CATG	9 cut(s)	139, 418, 458, 567, 624, 708, 739, 860, 967
FauI	CCCGC	1 cut(s)	971
FauNDI	CATATG	2 cut(s)	1377, 1461
Fnu4HI	GCNGC	6 cut(s)	507, 744, 992, 1308, 1311, 1493
FokI	GGATG	2 cut(s)	656, 945
FriOI	GRGCYC	1 cut(s)	1085
Fsp4HI	GCNGC	6 cut(s)	507, 744, 992, 1308, 1311, 1493
FspBI	CTAG	2 cut(s)	204, 563
GluI	GCNGC	6 cut(s)	507, 744, 992, 1308, 1311, 1493
HaeIII	GGCC	5 cut(s)	147, 818, 1141, 1288, 1433
Hin1II	CATG	9 cut(s)	143, 422, 462, 571, 628, 712, 743, 864, 971
HincII	GTYRAC	1 cut(s)	1322
HindII	GTYRAC	1 cut(s)	1322
HindIII	AAGCTT	1 cut(s)	195
HinfI	GANTC	3 cut(s)	547, 1075, 1294
HphI	GGTGA	2 cut(s)	337, 836
Hpy166II	GTNNAC	4 cut(s)	94, 291, 298, 1322
Hpy188I	TCNGA	7 cut(s)	52, 60, 546, 766, 1074, 1080, 1184
Hpy188III	TCNNGA	5 cut(s)	307, 709, 752, 1014, 1038
Hpy8I	GTNNAC	4 cut(s)	94, 291, 298, 1322
HpyAV	CCTTC	6 cut(s)	57, 86, 246, 758, 1085, 1179
HpyCH4III	ACNGT	7 cut(s)	66, 295, 930, 1399, 1441, 1513, 1519
HpyCH4IV	ACGT	4 cut(s)	104, 600, 667, 694
HpyF10VI	GCNNNNNNNGC	4 cut(s)	731, 740, 1256, 1462
HpyF3I	CTNAG	2 cut(s)	716, 1077
HpySE526I	ACGT	4 cut(s)	104, 600, 667, 694
Hsp92II	CATG	9 cut(s)	143, 422, 462, 571, 628, 712, 743, 864, 971
Kzo9I	GATC	9 cut(s)	165, 208, 482, 648, 798, 869, 880, 1117, 1184
LmnI	GCTCC	4 cut(s)	450, 462, 621, 1278
Lsp1109I	GCAGC	5 cut(s)	518, 755, 1003, 1294, 1504
LweI	GCATC	5 cut(s)	239, 457, 634, 745, 1231
MaeI	CTAG	2 cut(s)	204, 563
MaeII	ACGT	4 cut(s)	104, 600, 667, 694
MaeIII	GTNAC	5 cut(s)	429, 593, 842, 1507, 1513
MalI	GATC	9 cut(s)	167, 210, 484, 650, 800, 871, 882, 1119, 1186
MboI	GATC	9 cut(s)	165, 208, 482, 648, 798, 869, 880, 1117, 1184
MboII	GAAGA	5 cut(s)	848, 983, 1277, 1359, 1520
MflI	RGATCY	3 cut(s)	869, 1117, 1184
MhlI	GDGCHC	2 cut(s)	736, 1085
MlsI	TGGCCA	2 cut(s)	818, 1141
MluCI	AATT	8 cut(s)	13, 82, 472, 488, 830, 1123, 1369, 1501
MluNI	TGGCCA	2 cut(s)	818, 1141
MlyI	GAGTC	1 cut(s)	1069
MmeI	TCCRAC	6 cut(s)	152, 501, 858, 935, 1171, 1216
Mox20I	TGGCCA	2 cut(s)	818, 1141
Mph1103I	ATGCAT	1 cut(s)	232
MroXI	GAANNNNTTC	2 cut(s)	65, 75
MscI	TGGCCA	2 cut(s)	818, 1141
MseI	TTAA	4 cut(s)	182, 581, 677, 890
Msp20I	TGGCCA	2 cut(s)	818, 1141
MspA1I	CMGCKG	3 cut(s)	509, 994, 1495
MspR9I	CCNGG	3 cut(s)	1138, 1148, 1484
Mva1269I	GAATGC	2 cut(s)	232, 629
MvaI	CCWGG	3 cut(s)	1138, 1148, 1484
MwoI	GCNNNNNNNGC	4 cut(s)	731, 740, 1256, 1462
NcoI	CCATGG	1 cut(s)	418
NdeI	CATATG	2 cut(s)	1377, 1461
NdeII	GATC	9 cut(s)	165, 208, 482, 648, 798, 869, 880, 1117, 1184
NlaIII	CATG	9 cut(s)	143, 422, 462, 571, 628, 712, 743, 864, 971
NlaIV	GGNNCC	6 cut(s)	446, 617, 810, 1119, 1280, 1385
NmeAIII	GCCGAG	1 cut(s)	1459
NmuCI	GTSAC	2 cut(s)	593, 842
NsiI	ATGCAT	1 cut(s)	232
NspV	TTCGAA	1 cut(s)	69
PagI	TCATGA	1 cut(s)	708
PceI	AGGCCT	1 cut(s)	147
PcsI	WCGNNNNNNNCGW	1 cut(s)	217
PctI	GAATGC	2 cut(s)	232, 629
PdmI	GAANNNNTTC	2 cut(s)	65, 75
PfeI	GAWTC	2 cut(s)	547, 1294
PflMI	CCANNNNNTGG	2 cut(s)	625, 640
PfoI	TCCNGGA	1 cut(s)	1482
PkrI	GCNGC	6 cut(s)	508, 745, 993, 1309, 1312, 1494
PleI	GAGTC	1 cut(s)	1069
PpsI	GAGTC	1 cut(s)	1069
Ppu21I	YACGTR	2 cut(s)	601, 668
PpuMI	RGGWCCY	2 cut(s)	1094, 1383
PsiI	TTATAA	1 cut(s)	689
Psp5II	RGGWCCY	2 cut(s)	1094, 1383
Psp6I	CCWGG	3 cut(s)	1136, 1146, 1482
PspGI	CCWGG	3 cut(s)	1136, 1146, 1482
PspN4I	GGNNCC	6 cut(s)	446, 617, 810, 1119, 1280, 1385
PspPI	GGNCC	4 cut(s)	415, 1094, 1166, 1383
PspPPI	RGGWCCY	2 cut(s)	1094, 1383
PstI	CTGCAG	5 cut(s)	405, 806, 842, 1090, 1111
PstNI	CAGNNNCTG	2 cut(s)	509, 1517
PsuI	RGATCY	3 cut(s)	869, 1117, 1184
PvuII	CAGCTG	2 cut(s)	509, 994
RsaI	GTAC	3 cut(s)	103, 1206, 1443
RsaNI	GTAC	3 cut(s)	102, 1205, 1442
SaqAI	TTAA	4 cut(s)	182, 581, 677, 890
SatI	GCNGC	6 cut(s)	507, 744, 992, 1308, 1311, 1493
Sau3AI	GATC	9 cut(s)	165, 208, 482, 648, 798, 869, 880, 1117, 1184
Sau96I	GGNCC	4 cut(s)	415, 1094, 1166, 1383
SchI	GAGTC	1 cut(s)	1069
ScrFI	CCNGG	3 cut(s)	1138, 1148, 1484
SduI	GDGCHC	2 cut(s)	736, 1085
SfaNI	GCATC	5 cut(s)	239, 457, 634, 745, 1231
SfcI	CTRYAG	6 cut(s)	401, 802, 838, 1053, 1086, 1107
SfuI	TTCGAA	1 cut(s)	69
SinI	GGWCC	4 cut(s)	415, 1094, 1166, 1383
SmlI	CTYRAG	2 cut(s)	865, 1302
SmoI	CTYRAG	2 cut(s)	865, 1302
Sse9I	AATT	8 cut(s)	13, 82, 472, 488, 830, 1123, 1369, 1501
SseBI	AGGCCT	1 cut(s)	147
SsiI	CCGC	3 cut(s)	964, 1311, 1495
SspI	AATATT	1 cut(s)	1479
SspMI	CTAG	2 cut(s)	204, 563
StuI	AGGCCT	1 cut(s)	147
StyD4I	CCNGG	3 cut(s)	1136, 1146, 1482
StyI	CCWWGG	4 cut(s)	418, 726, 819, 1097
TaaI	ACNGT	7 cut(s)	66, 295, 930, 1399, 1441, 1513, 1519
TaiI	ACGT	4 cut(s)	107, 603, 670, 697
TaqI	TCGA	4 cut(s)	69, 211, 485, 980
TasI	AATT	8 cut(s)	13, 82, 472, 488, 830, 1123, 1369, 1501
TatI	WGTACW	1 cut(s)	1204
TauI	GCSGC	1 cut(s)	1313
TfiI	GAWTC	2 cut(s)	547, 1294
Tru1I	TTAA	4 cut(s)	182, 581, 677, 890
Tru9I	TTAA	4 cut(s)	182, 581, 677, 890
TscAI	CASTG	8 cut(s)	120, 279, 298, 345, 405, 842, 933, 1402
TseFI	GTSAC	2 cut(s)	593, 842
TseI	GCWGC	5 cut(s)	506, 743, 991, 1307, 1492
Tsp45I	GTSAC	2 cut(s)	593, 842
TspDTI	ATGAA	7 cut(s)	697, 725, 804, 842, 966, 984, 1307
TspGWI	ACGGA	1 cut(s)	1287
TspRI	CASTG	8 cut(s)	120, 279, 298, 345, 405, 842, 933, 1402
Van91I	CCANNNNNTGG	2 cut(s)	625, 640
VpaK11BI	GGWCC	4 cut(s)	415, 1094, 1166, 1383
XagI	CCTNNNNNAGG	1 cut(s)	1089
XapI	RAATTY	1 cut(s)	1501
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1154
XmnI	GAANNNNTTC	2 cut(s)	65, 75
XspI	CTAG	2 cut(s)	204, 563
Zsp2I	ATGCAT	1 cut(s)	232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.