Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000007.1

Orthogroup ID

OG0007997

Physical Location & Seq

Genomic Coordinates Reverse (-)

62127 .. 69208

Gene Structure 7082 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000007.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ctgggttcgaaactccgcacaatcgttcgatcatcgatcaagctactgatcctagtcatcgtctctcttcttgggcttgcggtacttctcctcaatttgcttggccatgaagagggcggtgtcggcgagcttcttgatgttcggaacggcgtagttttgggctatgtagactccggtgaccgtgcccattatgaaggagaaggagctctttatgatccccatcaccgatttctaggaacccgccccaccgacgctacagcgtcagcgtcgtctctcagctcaaatcaggttatcgggtttcgatttggggaatttaccatttgtgtggttattttggagtttgcattgagctttgctggtctccagttttggacggaaacgtcgctagttaaactaaaatcggagggattacttgcggagaatttgattccggcggccaatgttggccatgttgttgatctgcttttggactcctatgccactgttgcactgctggcaaattttgtactcaatgcatttattttactcgttctatctctcaagactatattcttcggggagttgtatccttctgaaactcggaaactgttcgaacgccttctcaattatatagtttacaagggtacgtttctaccactggttattcctccaacgatatatcatgcaggcctgtggtcagtctggttgatcgttctttgttctttaaagatgtttcaagctttggctagagatcgacttgaacgattgaatgcatctccttcagctacaccattgacatattttcgtgtgtattcagtgttgttgtttgtgttcactgtggatattttctggataaggctttgtgtggtgatatacagaacactgggtttatctatgtttctcctgttattatttgagcctttcagtattggatttgagacactgcaggctattttggtccatggatttcagttacttgatatatggctccatcattcagcatggagcgatgcaaattgtgaaagatcgaaattatttgatacatcagcagctggtttgttgttggaatggaaaggcagtcttactcggaatctgggttttgtcctagacatggcaacattgttaatggcacttggtcactacgtgcatatttggtggctccacggcatggcatttcattttgtggatgcgatcctttttctaaacatacgtgccttgttaagtgctattataaaacgtataagagggttcatgaaactgagaaaagccttgggtgctctccatgcagcccttccagatgcaacatctgacgaactacgagcttatgatgatgaatgtgcgatctgcagggaacctatggccaaggctaaaaaattacactgcagtcacctatttcatcttccatgcttgagatcttggttggatcaaggtttaaatgaggtatattcttgtccaacttgtcgcaagccactgtttgtaggcagaccagaaaatgaagcacatccccgccatgaagaaacttcgagtgatgagcagctggctcgtcaaataagttcaggacttgatagacaaaatagttctggacatacactccctacaggtgttttccccaatcagactcagagccctgcagaaggtccttggaggactgcaggactagatccaaattggttgaacacctggccaagccagggagttgatggggcaggtccttctactgctatcggatctgttggactggggagagtacagatgatgatgaggcatcttgcctctgttggagaaacctacgcccagacagcccttgaagatggtgcgtggagcctctggcctattaatccgtctcaagctgccgcaactggtcaacccattcctcctgctgacgatggaagatacccaatgatgatgaggcatcttgcctctgttggagaaacctatgcccagacagcccttgaagatggtgcgtggagcctctggcctatgaatccgtctcaagctgccgcaactggtcaacccattcctcctgctgacgatggaagatacccagtaggaacgcgcaatttacatatgaggtccccttcacgcactgtgaatgacaacatagcaaacatacttgctatggccgagacagtacgggaagttttgcctcatatgcccgatgacataatattccaggatttgcagcggacaaattctgttacagttactgttaaggttgggtgggaacgtggaagttggaaacggcgtcgtaaaaacatggccgccgaggcaaccggggatgctggggttgtagaagacaggaggtgggttttttggtcaaagcacgagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010363 GO:0010498 GO:0010941 GO:0010942 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031347 GO:0031349 GO:0032446 GO:0034052 GO:0036211 GO:0043067 GO:0043068 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0051603 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071944 GO:0080134 GO:0080135 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

CUE zf-RING_2

Protein Analysis

769

Amino Acids

85.44

Weight (kDa)

6.51

Isoelectric Point (pI)

35.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007997)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25230 AT4G25230 AT4G25230 AT5G51450 AT5G51450
fragaria_vesca	FvH4_7g27570 FvH4_7g27570 FvH4_7g27570
malus_domestica	MD07G1254100.v1.1
prunus_persica	Prupe.2G277400_v2.0.a1
pyrus_communis	pycom01g19350 pycom07g22680
rosa_chinensis	RchiOBHm_Chr1g0374441
rosa_laevigata	RLG00000026738
rosa_multiflora	Rmu_sc0006877.1_g000003 Rmu_ssc0000007.1_g000009
rosa_roxburghii	Rroxscaffold_4G00283490
rosa_rugosa	Rorug01G0382800 Rorug01G0382900
rosa_samantha	Rh1AG393900 Rh1BG358500 Rh1CG371500 Rh1DG389100
rosa_wichuraiana	Rw1G034220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1211
AasI	GACNNNNNNGTC	1 cut(s)	379
Acc36I	ACCTGC	1 cut(s)	1676
AccB7I	CCANNNNNTGG	1 cut(s)	1147
AccI	GTMKAC	1 cut(s)	168
AccII	CGCG	1 cut(s)	2035
AclWI	GGATC	6 cut(s)	43, 209, 1165, 1410, 1634, 1714
AcoI	YGGCCR	7 cut(s)	103, 435, 445, 1338, 1661, 2100, 2238
AcsI	RAATTY	4 cut(s)	311, 421, 499, 2170
AcuI	CTGAAG	1 cut(s)	744
AcyI	GRCGYC	1 cut(s)	2224
AdeI	CACNNNGTG	1 cut(s)	1123
AfaI	GTAC	5 cut(s)	84, 507, 625, 1728, 2112
AfiI	CCNNNNNNNGG	5 cut(s)	112, 1090, 1147, 1613, 1670
AgsI	TTSAA	6 cut(s)	716, 740, 748, 1654, 1787, 1934
AjnI	CCWGG	3 cut(s)	1658, 1668, 2151
Alw21I	GWGCWC	2 cut(s)	208, 1258
Alw26I	GTCTC	7 cut(s)	67, 276, 365, 911, 1827, 1974, 2099
AlwI	GGATC	6 cut(s)	43, 209, 1165, 1410, 1634, 1714
AlwNI	CAGNNNCTG	2 cut(s)	1031, 2186
ApeKI	GCWGC	6 cut(s)	1028, 1265, 1513, 1829, 1976, 2161
ApoI	RAATTY	4 cut(s)	311, 421, 499, 2170
AseI	ATTAAT	1 cut(s)	1815
Asp700I	GAANNNNTTC	2 cut(s)	587, 597
AspLEI	GCGC	1 cut(s)	2037
AspS9I	GGNCC	4 cut(s)	937, 1616, 1688, 2052
AsuC2I	CCSGG	1 cut(s)	2254
AsuHPI	GGTGA	4 cut(s)	188, 215, 859, 1358
AsuII	TTCGAA	2 cut(s)	8, 591
AvaII	GGWCC	4 cut(s)	937, 1616, 1688, 2052
BaeGI	GKGCMC	1 cut(s)	187
BalI	TGGCCA	4 cut(s)	105, 447, 1340, 1663
BanII	GRGCYC	2 cut(s)	208, 1607
BauI	CACGAG	1 cut(s)	2303
BbsI	GAAGAC	1 cut(s)	2280
Bbv12I	GWGCWC	2 cut(s)	208, 1258
BbvI	GCAGC	6 cut(s)	1040, 1277, 1525, 1816, 1963, 2173
BccI	CCATC	7 cut(s)	228, 978, 1673, 1784, 1859, 1931, 2006
BceAI	ACGGC	3 cut(s)	163, 1159, 2237
BcgI	CGANNNNNNTGC	2 cut(s)	1502, 1536
BciT130I	CCWGG	3 cut(s)	1660, 1670, 2153
BciVI	GTATCC	1 cut(s)	576
BcnI	CCSGG	1 cut(s)	2254
BcoDI	GTCTC	7 cut(s)	67, 276, 365, 911, 1827, 1974, 2099
BfaI	CTAG	6 cut(s)	53, 233, 386, 726, 1085, 1637
BfmI	CTRYAG	7 cut(s)	255, 923, 1324, 1360, 1575, 1608, 1629
BfuAI	ACCTGC	1 cut(s)	1676
BfuI	GTATCC	1 cut(s)	576
BglI	GCCNNNNNGGC	1 cut(s)	2246
BglII	AGATCT	1 cut(s)	1391
Bme1390I	CCNGG	4 cut(s)	1660, 1670, 2153, 2254
Bme18I	GGWCC	4 cut(s)	937, 1616, 1688, 2052
BmgT120I	GGNCC	4 cut(s)	937, 1616, 1688, 2052
BmiI	GGNNCC	7 cut(s)	238, 968, 1139, 1332, 1802, 1949, 2054
BmrFI	CCNGG	4 cut(s)	1660, 1670, 2153, 2254
BmrI	ACTGGG	3 cut(s)	872, 1727, 2018
BmsI	GCATC	7 cut(s)	761, 979, 1156, 1267, 1753, 1900, 2248
BmuI	ACTGGG	3 cut(s)	872, 1727, 2018
BpiI	GAAGAC	1 cut(s)	2280
BpmI	CTGGAG	1 cut(s)	347
Bpu14I	TTCGAA	2 cut(s)	8, 591
BpuEI	CTTGAG	4 cut(s)	524, 1408, 1809, 1956
BpuMI	CCSGG	1 cut(s)	2254
Bsa29I	ATCGAT	1 cut(s)	35
BsaAI	YACGTR	2 cut(s)	1123, 1190
BsaBI	GATNNNNATC	1 cut(s)	219
BsaHI	GRCGYC	1 cut(s)	2224
BsaI	GGTCTC	1 cut(s)	365
BsaJI	CCNNGG	8 cut(s)	940, 1141, 1248, 1341, 1619, 1669, 2244, 2253
BsaWI	WCCGGW	1 cut(s)	173
BsaXI	ACNNNNNCTCC	2 cut(s)	1554, 1584
Bsc4I	CCNNNNNNNGG	5 cut(s)	112, 1090, 1147, 1613, 1670
Bse1I	ACTGG	7 cut(s)	364, 642, 867, 1722, 1843, 1990, 2024
Bse8I	GATNNNNATC	1 cut(s)	219
BseBI	CCWGG	3 cut(s)	1660, 1670, 2153
BseCI	ATCGAT	1 cut(s)	35
BseDI	CCNNGG	8 cut(s)	940, 1141, 1248, 1341, 1619, 1669, 2244, 2253
BseGI	GGATG	3 cut(s)	1171, 1480, 2263
BseJI	GATNNNNATC	1 cut(s)	219
BseLI	CCNNNNNNNGG	5 cut(s)	112, 1090, 1147, 1613, 1670
BseMII	CTCAG	3 cut(s)	289, 1229, 1613
BseNI	ACTGG	7 cut(s)	364, 642, 867, 1722, 1843, 1990, 2024
BseRI	GAGGAG	1 cut(s)	80
BseSI	GKGCMC	1 cut(s)	187
BseXI	GCAGC	6 cut(s)	1040, 1277, 1525, 1816, 1963, 2173
BseYI	CCCAGC	1 cut(s)	2261
Bsh1236I	CGCG	1 cut(s)	2035
BshVI	ATCGAT	1 cut(s)	35
BsiHKAI	GWGCWC	2 cut(s)	208, 1258
BsiSI	CCGG	3 cut(s)	174, 431, 2253
BslFI	GGGAC	1 cut(s)	2038
BslI	CCNNNNNNNGG	5 cut(s)	112, 1090, 1147, 1613, 1670
BsmAI	GTCTC	7 cut(s)	67, 276, 365, 911, 1827, 1974, 2099
BsmBI	CGTCTC	4 cut(s)	67, 276, 1827, 1974
BsmFI	GGGAC	1 cut(s)	2038
BsmI	GAATGC	1 cut(s)	754
Bso31I	GGTCTC	1 cut(s)	365
Bsp119I	TTCGAA	2 cut(s)	8, 591
Bsp1286I	GDGCHC	4 cut(s)	187, 208, 1258, 1607
Bsp19I	CCATGG	1 cut(s)	940
BspCNI	CTCAG	3 cut(s)	288, 1230, 1612
BspDI	ATCGAT	1 cut(s)	35
BspFNI	CGCG	1 cut(s)	2035
BspHI	TCATGA	1 cut(s)	1230
BspLI	GGNNCC	7 cut(s)	238, 968, 1139, 1332, 1802, 1949, 2054
BspMAI	CTGCAG	5 cut(s)	927, 1328, 1364, 1612, 1633
BspMI	ACCTGC	1 cut(s)	1676
BspPI	GGATC	6 cut(s)	43, 209, 1165, 1410, 1634, 1714
BspT104I	TTCGAA	2 cut(s)	8, 591
BspTNI	GGTCTC	1 cut(s)	365
BsrI	ACTGG	7 cut(s)	364, 642, 867, 1722, 1843, 1990, 2024
BssECI	CCNNGG	8 cut(s)	940, 1141, 1248, 1341, 1619, 1669, 2244, 2253
BssNI	GRCGYC	1 cut(s)	2224
BssSI	CACGAG	1 cut(s)	2303
BssT1I	CCWWGG	4 cut(s)	940, 1248, 1341, 1619
Bst2BI	CACGAG	1 cut(s)	2303
Bst2UI	CCWGG	3 cut(s)	1660, 1670, 2153
Bst4CI	ACNGT	9 cut(s)	182, 484, 588, 817, 1452, 2068, 2110, 2182, 2188
Bst6I	CTCTTC	2 cut(s)	72, 105
BstACI	GRCGYC	1 cut(s)	2224
BstBAI	YACGTR	2 cut(s)	1123, 1190
BstBI	TTCGAA	2 cut(s)	8, 591
BstC8I	GCNNGC	7 cut(s)	78, 128, 495, 667, 927, 1445, 1518
BstDEI	CTNAG	3 cut(s)	275, 1238, 1599
BstDSI	CCRYGG	2 cut(s)	940, 1141
BstEII	GGTNACC	1 cut(s)	176
BstENI	CCTNNNNNAGG	1 cut(s)	1611
BstF5I	GGATG	3 cut(s)	1171, 1480, 2263
BstFNI	CGCG	1 cut(s)	2035
BstHHI	GCGC	1 cut(s)	2037
BstMAI	GTCTC	7 cut(s)	67, 276, 365, 911, 1827, 1974, 2099
BstMWI	GCNNNNNNNGC	9 cut(s)	123, 485, 494, 1253, 1262, 1778, 1925, 2131, 2246
BstNI	CCWGG	3 cut(s)	1660, 1670, 2153
BstPI	GGTNACC	1 cut(s)	176
BstSCI	CCNGG	4 cut(s)	1658, 1668, 2151, 2252
BstSFI	CTRYAG	7 cut(s)	255, 923, 1324, 1360, 1575, 1608, 1629
BstSLI	GKGCMC	1 cut(s)	187
BstUI	CGCG	1 cut(s)	2035
BstV1I	GCAGC	6 cut(s)	1040, 1277, 1525, 1816, 1963, 2173
BstV2I	GAAGAC	1 cut(s)	2280
BstX2I	RGATCY	3 cut(s)	1391, 1639, 1706
BstXI	CCANNNNNNTGG	1 cut(s)	325
BstYI	RGATCY	3 cut(s)	1391, 1639, 1706
Bsu15I	ATCGAT	1 cut(s)	35
BsuI	GTATCC	1 cut(s)	576
BsuTUI	ATCGAT	1 cut(s)	35
BtgI	CCRYGG	2 cut(s)	940, 1141
BtgZI	GCGATG	1 cut(s)	1002
BtsCI	GGATG	3 cut(s)	1171, 1480, 2263
BtsI	GCAGTG	3 cut(s)	488, 920, 1357
BveI	ACCTGC	1 cut(s)	1676
Cac8I	GCNNGC	7 cut(s)	78, 128, 495, 667, 927, 1445, 1518
CaiI	CAGNNNCTG	2 cut(s)	1031, 2186
CciI	TCATGA	1 cut(s)	1230
CfoI	GCGC	1 cut(s)	2037
Cfr13I	GGNCC	4 cut(s)	937, 1616, 1688, 2052
ClaI	ATCGAT	1 cut(s)	35
CseI	GACGC	4 cut(s)	249, 255, 260, 2213
Csp6I	GTAC	5 cut(s)	83, 506, 624, 1727, 2111
CviQI	GTAC	5 cut(s)	83, 506, 624, 1727, 2111
DdeI	CTNAG	3 cut(s)	275, 1238, 1599
DraI	TTTAAA	2 cut(s)	705, 1413
DraIII	CACNNNGTG	1 cut(s)	1123
DrdI	GACNNNNNNGTC	1 cut(s)	379
DseDI	GACNNNNNNGTC	1 cut(s)	379
EaeI	YGGCCR	7 cut(s)	103, 435, 445, 1338, 1661, 2100, 2238
Eam1104I	CTCTTC	2 cut(s)	72, 105
EarI	CTCTTC	2 cut(s)	72, 105
Ecl136II	GAGCTC	1 cut(s)	206
Eco130I	CCWWGG	4 cut(s)	940, 1248, 1341, 1619
Eco147I	AGGCCT	1 cut(s)	669
Eco24I	GRGCYC	2 cut(s)	208, 1607
Eco31I	GGTCTC	1 cut(s)	365
Eco47I	GGWCC	4 cut(s)	937, 1616, 1688, 2052
Eco53kI	GAGCTC	1 cut(s)	206
Eco57I	CTGAAG	1 cut(s)	744
Eco91I	GGTNACC	1 cut(s)	176
EcoICRI	GAGCTC	1 cut(s)	206
EcoNI	CCTNNNNNAGG	1 cut(s)	1611
EcoO109I	RGGNCCY	3 cut(s)	1616, 1688, 2052
EcoO65I	GGTNACC	1 cut(s)	176
EcoRII	CCWGG	3 cut(s)	1658, 1668, 2151
EcoT14I	CCWWGG	4 cut(s)	940, 1248, 1341, 1619
EcoT22I	ATGCAT	2 cut(s)	517, 754
EcoT38I	GRGCYC	2 cut(s)	208, 1607
ErhI	CCWWGG	4 cut(s)	940, 1248, 1341, 1619
Esp3I	CGTCTC	4 cut(s)	67, 276, 1827, 1974
FalI	AAGNNNNNCTT	4 cut(s)	192, 224, 1044, 1076
FaqI	GGGAC	1 cut(s)	2038
FauI	CCCGC	2 cut(s)	248, 1493
FauNDI	CATATG	2 cut(s)	2046, 2130
FblI	GTMKAC	1 cut(s)	168
FokI	GGATG	3 cut(s)	1178, 1467, 2270
FriOI	GRGCYC	2 cut(s)	208, 1607
FspBI	CTAG	6 cut(s)	53, 233, 386, 726, 1085, 1637
GlaI	GCGC	1 cut(s)	2036
GsaI	CCCAGC	1 cut(s)	2265
GsuI	CTGGAG	1 cut(s)	347
HapII	CCGG	3 cut(s)	174, 431, 2253
HgaI	GACGC	4 cut(s)	249, 255, 260, 2213
HhaI	GCGC	1 cut(s)	2037
Hin1I	GRCGYC	1 cut(s)	2224
Hin6I	GCGC	1 cut(s)	2035
HinP1I	GCGC	1 cut(s)	2035
HincII	GTYRAC	2 cut(s)	1844, 1991
HindII	GTYRAC	2 cut(s)	1844, 1991
HindIII	AAGCTT	1 cut(s)	717
HinfI	GANTC	6 cut(s)	170, 427, 470, 1069, 1597, 1963
HpaII	CCGG	3 cut(s)	174, 431, 2253
HphI	GGTGA	4 cut(s)	188, 215, 859, 1358
Hpy166II	GTNNAC	5 cut(s)	169, 616, 813, 1844, 1991
Hpy188I	TCNGA	9 cut(s)	144, 403, 574, 582, 1068, 1288, 1596, 1602, 1706
Hpy188III	TCNNGA	7 cut(s)	134, 541, 829, 1231, 1274, 1536, 1560
Hpy8I	GTNNAC	5 cut(s)	169, 616, 813, 1844, 1991
Hpy99I	CGWCG	4 cut(s)	254, 271, 385, 2229
HpyAV	CCTTC	9 cut(s)	188, 194, 579, 608, 768, 1280, 1607, 1701, 2067
HpyCH4III	ACNGT	9 cut(s)	182, 484, 588, 817, 1452, 2068, 2110, 2182, 2188
HpyCH4IV	ACGT	6 cut(s)	380, 626, 1122, 1189, 1216, 2206
HpyF10VI	GCNNNNNNNGC	9 cut(s)	123, 485, 494, 1253, 1262, 1778, 1925, 2131, 2246
HpyF3I	CTNAG	3 cut(s)	275, 1238, 1599
HpySE526I	ACGT	6 cut(s)	380, 626, 1122, 1189, 1216, 2206
Hsp92I	GRCGYC	1 cut(s)	2224
HspAI	GCGC	1 cut(s)	2035
LmnI	GCTCC	6 cut(s)	203, 972, 984, 1143, 1800, 1947
Lsp1109I	GCAGC	6 cut(s)	1040, 1277, 1525, 1816, 1963, 2173
LweI	GCATC	7 cut(s)	761, 979, 1156, 1267, 1753, 1900, 2248
MaeI	CTAG	6 cut(s)	53, 233, 386, 726, 1085, 1637
MaeII	ACGT	6 cut(s)	380, 626, 1122, 1189, 1216, 2206
MaeIII	GTNAC	6 cut(s)	176, 951, 1115, 1364, 2176, 2182
MflI	RGATCY	3 cut(s)	1391, 1639, 1706
MhlI	GDGCHC	4 cut(s)	187, 208, 1258, 1607
MlsI	TGGCCA	4 cut(s)	105, 447, 1340, 1663
MluNI	TGGCCA	4 cut(s)	105, 447, 1340, 1663
MlyI	GAGTC	3 cut(s)	164, 464, 1591
MmeI	TCCRAC	8 cut(s)	674, 1023, 1380, 1457, 1693, 1738, 1885, 2195
Mox20I	TGGCCA	4 cut(s)	105, 447, 1340, 1663
Mph1103I	ATGCAT	2 cut(s)	517, 754
MroXI	GAANNNNTTC	2 cut(s)	587, 597
MscI	TGGCCA	4 cut(s)	105, 447, 1340, 1663
MseI	TTAA	7 cut(s)	390, 704, 1103, 1199, 1412, 1815, 2190
MslI	CAYNNNNRTG	1 cut(s)	323
Msp20I	TGGCCA	4 cut(s)	105, 447, 1340, 1663
MspA1I	CMGCKG	3 cut(s)	1031, 1516, 2164
MspI	CCGG	3 cut(s)	174, 431, 2253
MspR9I	CCNGG	4 cut(s)	1660, 1670, 2153, 2254
Mva1269I	GAATGC	1 cut(s)	754
MvaI	CCWGG	3 cut(s)	1660, 1670, 2153
MvnI	CGCG	1 cut(s)	2035
MwoI	GCNNNNNNNGC	9 cut(s)	123, 485, 494, 1253, 1262, 1778, 1925, 2131, 2246
NciI	CCSGG	1 cut(s)	2254
NcoI	CCATGG	1 cut(s)	940
NdeI	CATATG	2 cut(s)	2046, 2130
NlaIV	GGNNCC	7 cut(s)	238, 968, 1139, 1332, 1802, 1949, 2054
NmeAIII	GCCGAG	2 cut(s)	2128, 2269
NmuCI	GTSAC	3 cut(s)	176, 1115, 1364
NsiI	ATGCAT	2 cut(s)	517, 754
NspV	TTCGAA	2 cut(s)	8, 591
PagI	TCATGA	1 cut(s)	1230
PceI	AGGCCT	1 cut(s)	669
PcsI	WCGNNNNNNNCGW	1 cut(s)	739
PctI	GAATGC	1 cut(s)	754
PdmI	GAANNNNTTC	2 cut(s)	587, 597
PfeI	GAWTC	3 cut(s)	427, 1069, 1963
PflMI	CCANNNNNTGG	1 cut(s)	1147
PfoI	TCCNGGA	1 cut(s)	2151
PleI	GAGTC	3 cut(s)	164, 464, 1591
PpsI	GAGTC	3 cut(s)	164, 464, 1591
Ppu21I	YACGTR	2 cut(s)	1123, 1190
PpuMI	RGGWCCY	3 cut(s)	1616, 1688, 2052
PshBI	ATTAAT	1 cut(s)	1815
PsiI	TTATAA	1 cut(s)	1211
Psp124BI	GAGCTC	1 cut(s)	208
Psp5II	RGGWCCY	3 cut(s)	1616, 1688, 2052
Psp6I	CCWGG	3 cut(s)	1658, 1668, 2151
PspEI	GGTNACC	1 cut(s)	176
PspFI	CCCAGC	1 cut(s)	2261
PspGI	CCWGG	3 cut(s)	1658, 1668, 2151
PspN4I	GGNNCC	7 cut(s)	238, 968, 1139, 1332, 1802, 1949, 2054
PspPI	GGNCC	4 cut(s)	937, 1616, 1688, 2052
PspPPI	RGGWCCY	3 cut(s)	1616, 1688, 2052
PstI	CTGCAG	5 cut(s)	927, 1328, 1364, 1612, 1633
PstNI	CAGNNNCTG	2 cut(s)	1031, 2186
PsuI	RGATCY	3 cut(s)	1391, 1639, 1706
PvuII	CAGCTG	2 cut(s)	1031, 1516
RsaI	GTAC	5 cut(s)	84, 507, 625, 1728, 2112
RsaNI	GTAC	5 cut(s)	83, 506, 624, 1727, 2111
RseI	CAYNNNNRTG	1 cut(s)	323
SacI	GAGCTC	1 cut(s)	208
SaqAI	TTAA	7 cut(s)	390, 704, 1103, 1199, 1412, 1815, 2190
Sau96I	GGNCC	4 cut(s)	937, 1616, 1688, 2052
SchI	GAGTC	3 cut(s)	164, 464, 1591
ScrFI	CCNGG	4 cut(s)	1660, 1670, 2153, 2254
SduI	GDGCHC	4 cut(s)	187, 208, 1258, 1607
SfaNI	GCATC	7 cut(s)	761, 979, 1156, 1267, 1753, 1900, 2248
SfcI	CTRYAG	7 cut(s)	255, 923, 1324, 1360, 1575, 1608, 1629
SfuI	TTCGAA	2 cut(s)	8, 591
SinI	GGWCC	4 cut(s)	937, 1616, 1688, 2052
SmiMI	CAYNNNNRTG	1 cut(s)	323
SmlI	CTYRAG	4 cut(s)	539, 1387, 1824, 1971
SmoI	CTYRAG	4 cut(s)	539, 1387, 1824, 1971
SseBI	AGGCCT	1 cut(s)	669
SspI	AATATT	1 cut(s)	2148
SspMI	CTAG	6 cut(s)	53, 233, 386, 726, 1085, 1637
SstI	GAGCTC	1 cut(s)	208
StuI	AGGCCT	1 cut(s)	669
StyD4I	CCNGG	4 cut(s)	1658, 1668, 2151, 2252
StyI	CCWWGG	4 cut(s)	940, 1248, 1341, 1619
TaaI	ACNGT	9 cut(s)	182, 484, 588, 817, 1452, 2068, 2110, 2182, 2188
TaiI	ACGT	6 cut(s)	383, 629, 1125, 1192, 1219, 2209
TaqI	TCGA	8 cut(s)	8, 28, 35, 301, 591, 733, 1007, 1502
TatI	WGTACW	2 cut(s)	505, 1726
TauI	GCSGC	4 cut(s)	437, 1835, 1982, 2243
TfiI	GAWTC	3 cut(s)	427, 1069, 1963
Tru1I	TTAA	7 cut(s)	390, 704, 1103, 1199, 1412, 1815, 2190
Tru9I	TTAA	7 cut(s)	390, 704, 1103, 1199, 1412, 1815, 2190
TseFI	GTSAC	3 cut(s)	176, 1115, 1364
TseI	GCWGC	6 cut(s)	1028, 1265, 1513, 1829, 1976, 2161
Tsp45I	GTSAC	3 cut(s)	176, 1115, 1364
TspGWI	ACGGA	3 cut(s)	389, 1809, 1956
Van91I	CCANNNNNTGG	1 cut(s)	1147
VpaK11BI	GGWCC	4 cut(s)	937, 1616, 1688, 2052
VspI	ATTAAT	1 cut(s)	1815
XagI	CCTNNNNNAGG	1 cut(s)	1611
XapI	RAATTY	4 cut(s)	311, 421, 499, 2170
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1676
XmiI	GTMKAC	1 cut(s)	168
XmnI	GAANNNNTTC	2 cut(s)	587, 597
XspI	CTAG	6 cut(s)	53, 233, 386, 726, 1085, 1637
Zsp2I	ATGCAT	2 cut(s)	517, 754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.