Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006877.1

Orthogroup ID

OG0007997

Physical Location & Seq

Genomic Coordinates Reverse (-)

11761 .. 26506

Gene Structure 14746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006877.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ctgggttcgaaactccgcacaacctttcgatcatcgatcaagctactgatcctagtcgtcgtctctcttcttgggcttgcggtacttctcctcaatttgtttggccatgaagagggcggtgtcggcgagcttcttgatgttcggaacggcgtagttttgggctatgtagactccggtgaccgtgcccattatgaaggagaaggagctctttatgatccccatcaccgatttctaggtgcgacgcgcgtggaaattgcagaaccccgccccaccgacgctacagcgtcagcgtcgtctctcagctcaaatcaggttatcgggtttcgatttggggaatttaccatttgtgtggttattttggagtttgcattgagctttgctggtctccagttttggacggaaacgtcgctagttaaactaaaatcggagggattacttgcggagaatttgattccggcggccaatgttggccatgttgttgatctgcttttggactcctatgccactgttgcactgctggcaaattttgtactcaatgcatttattttactcgttctatctctcaagactatattcttcggggagttgtatccttctgaaactcggaaactgttcgaacgccttctcaattatatagtttacaagggtacgtttctaccactggttattcctccaacgatatatcatgcaggcctgtggtcagtctggttgatcgttctttgttctttaaagatgtttcaagctttggctagagatcgacttgaacgattgaatgcatctccttcagctacaccattgacatattttcgtgtgtactcagtgttgttgtttgtgttcactgtggatattttctggataaggctttgtgtggtgatatacagaacactgggtttatctatgtttctcctgttattatttgagcctttcagtattggatttgagacactgcaggctattttggtccatggatttcagttacttgatatatggctccatcattcagcatggagcgatgcaaattgtgaaagatcgaaattatttgatacatcagcagctggtttgttgttggaatggaaaggcagtcttactcggaatctgggttttgtcctagacatggcaacattgttaatggcacttggtcactacgtgcatatttggtggctccacggcatggcatttcattttgtggatgcgatcctttttctaaacatacgtgccttgttaagtgctattataaaacgtataagagggttcatgaaactgagaaaagccttgggtgctctccatgcagcccttccagatgcaacatctgacgaactacgagcttatgatgatgaatgtgcgatctgcagggaacctatggccaaggctaaaaaattacactgcagtcacctatttcatcttccatgcttgagatcttggttggatcaaggtttaaatgaggtatattcttgtccaacttgtcgcaagccactgtttgtaggcagaccagaaaatgaagcacatccccgccatgaagaaacttcgagtgatgagcagctggctcgtcaaataagttcaggacttgatagacaaaatagttctggacatacactccctacaggtgttttccccaatcagactcagagccctgcagaaggtccttggagaactggaggtagtaaaattgctaaggggaagaacaaggaactgtctcctcaggatgcagccatgatgatacaagggaatttcagagcttatctgatccgtagatcacaggctcttcgggcccttagagacctggctgttgccaagtccaagctgaaggagctgagagcattgtttaataacttctcttaccgccgccgtgtagcccatgatacggctgagcgtcaaaggttcactgaaaaaatcattgttctgctccttactgtggatgccattgagggtgctgatttaatggtgcgatccgcaaagaggtcgatggtggatgagctggaagctatgcttgaagtggttgacccccaaccagctggaaaatcattgtccatgaggaggaggacctttgatatgccagatggtgtcattcaaagggagatcgctgaaggtgtggcacaggttgtccaaatgcttgatcgtgaagagaacagttctacctttgaggcatgtttgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010363 GO:0010498 GO:0010941 GO:0010942 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031347 GO:0031349 GO:0032446 GO:0034052 GO:0036211 GO:0043067 GO:0043068 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0051603 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071944 GO:0080134 GO:0080135 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

CUE zf-RING_2

Protein Analysis

717

Amino Acids

80.35

Weight (kDa)

8.01

Isoelectric Point (pI)

37.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007997)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25230 AT4G25230 AT4G25230 AT5G51450 AT5G51450
fragaria_vesca	FvH4_7g27570 FvH4_7g27570 FvH4_7g27570
malus_domestica	MD07G1254100.v1.1
prunus_persica	Prupe.2G277400_v2.0.a1
pyrus_communis	pycom01g19350 pycom07g22680
rosa_chinensis	RchiOBHm_Chr1g0374441
rosa_laevigata	RLG00000026738
rosa_multiflora	Rmu_sc0006877.1_g000003 Rmu_ssc0000007.1_g000009
rosa_roxburghii	Rroxscaffold_4G00283490
rosa_rugosa	Rorug01G0382800 Rorug01G0382900
rosa_samantha	Rh1AG393900 Rh1BG358500 Rh1CG371500 Rh1DG389100
rosa_wichuraiana	Rw1G034220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1235
AasI	GACNNNNNNGTC	1 cut(s)	403
AccB7I	CCANNNNNTGG	1 cut(s)	1171
AccI	GTMKAC	1 cut(s)	168
AccII	CGCG	2 cut(s)	244, 246
AclWI	GGATC	6 cut(s)	43, 209, 1189, 1434, 1738, 1941
AcoI	YGGCCR	4 cut(s)	103, 459, 469, 1362
AcsI	RAATTY	4 cut(s)	335, 445, 523, 1726
AcuI	CTGAAG	3 cut(s)	768, 1823, 2103
AdeI	CACNNNGTG	1 cut(s)	1147
AfaI	GTAC	4 cut(s)	84, 531, 649, 815
AfiI	CCNNNNNNNGG	8 cut(s)	112, 1114, 1171, 1637, 1861, 1912, 1956, 2034
AgsI	TTSAA	5 cut(s)	740, 764, 772, 1991, 2069
AjnI	CCWGG	1 cut(s)	1779
Alw21I	GWGCWC	2 cut(s)	208, 1282
Alw26I	GTCTC	6 cut(s)	67, 300, 389, 935, 1698, 1770
AlwI	GGATC	6 cut(s)	43, 209, 1189, 1434, 1738, 1941
AlwNI	CAGNNNCTG	1 cut(s)	1055
AoxI	GGCC	6 cut(s)	103, 459, 469, 691, 1362, 1767
ApaI	GGGCCC	1 cut(s)	1771
ApeKI	GCWGC	4 cut(s)	1052, 1289, 1537, 1706
ApoI	RAATTY	4 cut(s)	335, 445, 523, 1726
Asp700I	GAANNNNTTC	2 cut(s)	611, 621
AspLEI	GCGC	1 cut(s)	246
AspS9I	GGNCC	5 cut(s)	961, 1640, 1767, 1768, 2040
AsuHPI	GGTGA	4 cut(s)	188, 215, 883, 1382
AsuII	TTCGAA	2 cut(s)	8, 615
AvaII	GGWCC	3 cut(s)	961, 1640, 2040
AxyI	CCTNAGG	1 cut(s)	1698
BaeGI	GKGCMC	2 cut(s)	187, 1771
BalI	TGGCCA	3 cut(s)	105, 471, 1364
BanII	GRGCYC	3 cut(s)	208, 1631, 1771
Bbv12I	GWGCWC	2 cut(s)	208, 1282
BbvI	GCAGC	4 cut(s)	1064, 1301, 1549, 1718
BccI	CCATC	4 cut(s)	228, 1002, 1957, 2051
BceAI	ACGGC	4 cut(s)	163, 1183, 1830, 1878
BcgI	CGANNNNNNTGC	4 cut(s)	1526, 1560, 1941, 1975
BciT130I	CCWGG	1 cut(s)	1781
BciVI	GTATCC	1 cut(s)	600
BcoDI	GTCTC	6 cut(s)	67, 300, 389, 935, 1698, 1770
BfaI	CTAG	5 cut(s)	53, 233, 410, 750, 1109
BfmI	CTRYAG	6 cut(s)	279, 947, 1348, 1384, 1599, 1632
BfuI	GTATCC	1 cut(s)	600
BglII	AGATCT	1 cut(s)	1415
BisI	GCNGC	6 cut(s)	459, 1053, 1290, 1538, 1707, 1843
BlpI	GCTNAGC	1 cut(s)	1866
BlsI	GCNGC	6 cut(s)	460, 1054, 1291, 1539, 1708, 1844
Bme1390I	CCNGG	1 cut(s)	1781
Bme18I	GGWCC	3 cut(s)	961, 1640, 2040
BmgT120I	GGNCC	5 cut(s)	961, 1640, 1767, 1768, 2040
BmiI	GGNNCC	4 cut(s)	992, 1163, 1356, 1769
BmrFI	CCNGG	1 cut(s)	1781
BmrI	ACTGGG	1 cut(s)	896
BmsI	GCATC	6 cut(s)	785, 1003, 1180, 1291, 1693, 1906
BmuI	ACTGGG	1 cut(s)	896
BpmI	CTGGAG	2 cut(s)	371, 1674
Bpu10I	CCTNAGC	1 cut(s)	1671
Bpu1102I	GCTNAGC	1 cut(s)	1866
Bpu14I	TTCGAA	2 cut(s)	8, 615
BpuEI	CTTGAG	2 cut(s)	548, 1432
Bsa29I	ATCGAT	1 cut(s)	35
BsaAI	YACGTR	2 cut(s)	1147, 1214
BsaBI	GATNNNNATC	1 cut(s)	219
BsaI	GGTCTC	2 cut(s)	389, 1770
BsaJI	CCNNGG	5 cut(s)	964, 1165, 1272, 1365, 1643
BsaWI	WCCGGW	1 cut(s)	173
BsaXI	ACNNNNNCTCC	2 cut(s)	1578, 1608
Bsc4I	CCNNNNNNNGG	8 cut(s)	112, 1114, 1171, 1637, 1861, 1912, 1956, 2034
Bse1I	ACTGG	4 cut(s)	388, 666, 891, 1657
Bse21I	CCTNAGG	1 cut(s)	1698
Bse8I	GATNNNNATC	1 cut(s)	219
BseBI	CCWGG	1 cut(s)	1781
BseCI	ATCGAT	1 cut(s)	35
BseDI	CCNNGG	5 cut(s)	964, 1165, 1272, 1365, 1643
BseGI	GGATG	5 cut(s)	1195, 1504, 1708, 1921, 1975
BseJI	GATNNNNATC	1 cut(s)	219
BseLI	CCNNNNNNNGG	8 cut(s)	112, 1114, 1171, 1637, 1861, 1912, 1956, 2034
BseMII	CTCAG	7 cut(s)	313, 831, 1253, 1637, 1712, 1802, 1857
BseNI	ACTGG	4 cut(s)	388, 666, 891, 1657
BseRI	GAGGAG	4 cut(s)	80, 1686, 2047, 2050
BseSI	GKGCMC	2 cut(s)	187, 1771
BseXI	GCAGC	4 cut(s)	1064, 1301, 1549, 1718
Bsh1236I	CGCG	2 cut(s)	244, 246
BshFI	GGCC	6 cut(s)	105, 461, 471, 693, 1364, 1769
BshVI	ATCGAT	1 cut(s)	35
BsiHKAI	GWGCWC	2 cut(s)	208, 1282
BsiSI	CCGG	2 cut(s)	174, 455
BslI	CCNNNNNNNGG	8 cut(s)	112, 1114, 1171, 1637, 1861, 1912, 1956, 2034
BsmAI	GTCTC	6 cut(s)	67, 300, 389, 935, 1698, 1770
BsmBI	CGTCTC	2 cut(s)	67, 300
BsmI	GAATGC	1 cut(s)	778
BsnI	GGCC	6 cut(s)	105, 461, 471, 693, 1364, 1769
Bso31I	GGTCTC	2 cut(s)	389, 1770
Bsp119I	TTCGAA	2 cut(s)	8, 615
Bsp120I	GGGCCC	1 cut(s)	1767
Bsp1286I	GDGCHC	5 cut(s)	187, 208, 1282, 1631, 1771
Bsp1720I	GCTNAGC	1 cut(s)	1866
Bsp19I	CCATGG	1 cut(s)	964
BspANI	GGCC	6 cut(s)	105, 461, 471, 693, 1364, 1769
BspCNI	CTCAG	7 cut(s)	312, 830, 1254, 1636, 1711, 1803, 1858
BspDI	ATCGAT	1 cut(s)	35
BspFNI	CGCG	2 cut(s)	244, 246
BspHI	TCATGA	1 cut(s)	1254
BspLI	GGNNCC	4 cut(s)	992, 1163, 1356, 1769
BspMAI	CTGCAG	4 cut(s)	951, 1352, 1388, 1636
BspPI	GGATC	6 cut(s)	43, 209, 1189, 1434, 1738, 1941
BspQI	GCTCTTC	1 cut(s)	1767
BspT104I	TTCGAA	2 cut(s)	8, 615
BspTNI	GGTCTC	2 cut(s)	389, 1770
BsrI	ACTGG	4 cut(s)	388, 666, 891, 1657
BssECI	CCNNGG	5 cut(s)	964, 1165, 1272, 1365, 1643
BssT1I	CCWWGG	4 cut(s)	964, 1272, 1365, 1643
Bst2UI	CCWGG	1 cut(s)	1781
Bst4CI	ACNGT	8 cut(s)	182, 508, 612, 841, 1476, 1692, 1912, 2129
Bst6I	CTCTTC	4 cut(s)	72, 105, 1767, 2115
BstBAI	YACGTR	2 cut(s)	1147, 1214
BstBI	TTCGAA	2 cut(s)	8, 615
BstC8I	GCNNGC	7 cut(s)	78, 128, 519, 691, 951, 1469, 1542
BstDEI	CTNAG	9 cut(s)	299, 817, 1262, 1623, 1671, 1698, 1772, 1811, 1866
BstDSI	CCRYGG	2 cut(s)	964, 1165
BstEII	GGTNACC	1 cut(s)	176
BstENI	CCTNNNNNAGG	1 cut(s)	1635
BstF5I	GGATG	5 cut(s)	1195, 1504, 1708, 1921, 1975
BstFNI	CGCG	2 cut(s)	244, 246
BstHHI	GCGC	1 cut(s)	246
BstMAI	GTCTC	6 cut(s)	67, 300, 389, 935, 1698, 1770
BstMWI	GCNNNNNNNGC	7 cut(s)	123, 509, 518, 1277, 1286, 1766, 1807
BstNI	CCWGG	1 cut(s)	1781
BstNSI	RCATGY	1 cut(s)	2148
BstPI	GGTNACC	1 cut(s)	176
BstSCI	CCNGG	1 cut(s)	1779
BstSFI	CTRYAG	6 cut(s)	279, 947, 1348, 1384, 1599, 1632
BstSLI	GKGCMC	2 cut(s)	187, 1771
BstUI	CGCG	2 cut(s)	244, 246
BstV1I	GCAGC	4 cut(s)	1064, 1301, 1549, 1718
BstX2I	RGATCY	1 cut(s)	1415
BstXI	CCANNNNNNTGG	2 cut(s)	349, 2012
BstYI	RGATCY	1 cut(s)	1415
Bsu15I	ATCGAT	1 cut(s)	35
Bsu36I	CCTNAGG	1 cut(s)	1698
BsuI	GTATCC	1 cut(s)	600
BsuRI	GGCC	6 cut(s)	105, 461, 471, 693, 1364, 1769
BsuTUI	ATCGAT	1 cut(s)	35
BtgI	CCRYGG	2 cut(s)	964, 1165
BtgZI	GCGATG	1 cut(s)	1026
BtsCI	GGATG	5 cut(s)	1195, 1504, 1708, 1921, 1975
BtsI	GCAGTG	3 cut(s)	512, 944, 1381
Cac8I	GCNNGC	7 cut(s)	78, 128, 519, 691, 951, 1469, 1542
CaiI	CAGNNNCTG	1 cut(s)	1055
CciI	TCATGA	1 cut(s)	1254
CfoI	GCGC	1 cut(s)	246
Cfr13I	GGNCC	5 cut(s)	961, 1640, 1767, 1768, 2040
ClaI	ATCGAT	1 cut(s)	35
CseI	GACGC	5 cut(s)	250, 273, 279, 284, 1859
Csp6I	GTAC	4 cut(s)	83, 530, 648, 814
CviQI	GTAC	4 cut(s)	83, 530, 648, 814
DdeI	CTNAG	9 cut(s)	299, 817, 1262, 1623, 1671, 1698, 1772, 1811, 1866
DraI	TTTAAA	2 cut(s)	729, 1437
DraIII	CACNNNGTG	1 cut(s)	1147
DrdI	GACNNNNNNGTC	1 cut(s)	403
DseDI	GACNNNNNNGTC	1 cut(s)	403
EaeI	YGGCCR	4 cut(s)	103, 459, 469, 1362
Eam1104I	CTCTTC	4 cut(s)	72, 105, 1767, 2115
EarI	CTCTTC	4 cut(s)	72, 105, 1767, 2115
Ecl136II	GAGCTC	1 cut(s)	206
Eco130I	CCWWGG	4 cut(s)	964, 1272, 1365, 1643
Eco147I	AGGCCT	1 cut(s)	693
Eco24I	GRGCYC	3 cut(s)	208, 1631, 1771
Eco31I	GGTCTC	2 cut(s)	389, 1770
Eco47I	GGWCC	3 cut(s)	961, 1640, 2040
Eco53kI	GAGCTC	1 cut(s)	206
Eco57I	CTGAAG	3 cut(s)	768, 1823, 2103
Eco81I	CCTNAGG	1 cut(s)	1698
Eco91I	GGTNACC	1 cut(s)	176
EcoICRI	GAGCTC	1 cut(s)	206
EcoNI	CCTNNNNNAGG	1 cut(s)	1635
EcoO109I	RGGNCCY	3 cut(s)	1640, 1768, 2040
EcoO65I	GGTNACC	1 cut(s)	176
EcoRII	CCWGG	1 cut(s)	1779
EcoT14I	CCWWGG	4 cut(s)	964, 1272, 1365, 1643
EcoT22I	ATGCAT	2 cut(s)	541, 778
EcoT38I	GRGCYC	3 cut(s)	208, 1631, 1771
ErhI	CCWWGG	4 cut(s)	964, 1272, 1365, 1643
Esp3I	CGTCTC	2 cut(s)	67, 300
FalI	AAGNNNNNCTT	6 cut(s)	192, 224, 1068, 1100, 1971, 2003
FauI	CCCGC	2 cut(s)	272, 1517
FblI	GTMKAC	1 cut(s)	168
Fnu4HI	GCNGC	6 cut(s)	459, 1053, 1290, 1538, 1707, 1843
FokI	GGATG	5 cut(s)	1202, 1491, 1715, 1928, 1982
FriOI	GRGCYC	3 cut(s)	208, 1631, 1771
Fsp4HI	GCNGC	6 cut(s)	459, 1053, 1290, 1538, 1707, 1843
FspBI	CTAG	5 cut(s)	53, 233, 410, 750, 1109
GlaI	GCGC	1 cut(s)	245
GluI	GCNGC	6 cut(s)	459, 1053, 1290, 1538, 1707, 1843
GsuI	CTGGAG	2 cut(s)	371, 1674
HaeIII	GGCC	6 cut(s)	105, 461, 471, 693, 1364, 1769
HapII	CCGG	2 cut(s)	174, 455
HgaI	GACGC	5 cut(s)	250, 273, 279, 284, 1859
HhaI	GCGC	1 cut(s)	246
Hin6I	GCGC	1 cut(s)	244
HinP1I	GCGC	1 cut(s)	244
HincII	GTYRAC	1 cut(s)	1999
HindII	GTYRAC	1 cut(s)	1999
HindIII	AAGCTT	1 cut(s)	741
HinfI	GANTC	5 cut(s)	170, 451, 494, 1093, 1621
HpaII	CCGG	2 cut(s)	174, 455
HphI	GGTGA	4 cut(s)	188, 215, 883, 1382
Hpy166II	GTNNAC	6 cut(s)	169, 640, 814, 837, 1881, 1999
Hpy188III	TCNNGA	9 cut(s)	134, 565, 853, 1255, 1298, 1560, 1584, 1700, 2117
Hpy8I	GTNNAC	6 cut(s)	169, 640, 814, 837, 1881, 1999
Hpy99I	CGWCG	5 cut(s)	62, 244, 278, 295, 409
HpyAV	CCTTC	9 cut(s)	188, 194, 603, 632, 792, 1304, 1631, 1798, 2078
HpyCH4III	ACNGT	8 cut(s)	182, 508, 612, 841, 1476, 1692, 1912, 2129
HpyCH4IV	ACGT	5 cut(s)	404, 650, 1146, 1213, 1240
HpyF10VI	GCNNNNNNNGC	7 cut(s)	123, 509, 518, 1277, 1286, 1766, 1807
HpyF3I	CTNAG	9 cut(s)	299, 817, 1262, 1623, 1671, 1698, 1772, 1811, 1866
HpySE526I	ACGT	5 cut(s)	404, 650, 1146, 1213, 1240
HspAI	GCGC	1 cut(s)	244
LguI	GCTCTTC	1 cut(s)	1767
LmnI	GCTCC	6 cut(s)	203, 996, 1008, 1167, 1807, 1908
Lsp1109I	GCAGC	4 cut(s)	1064, 1301, 1549, 1718
LweI	GCATC	6 cut(s)	785, 1003, 1180, 1291, 1693, 1906
MaeI	CTAG	5 cut(s)	53, 233, 410, 750, 1109
MaeII	ACGT	5 cut(s)	404, 650, 1146, 1213, 1240
MaeIII	GTNAC	4 cut(s)	176, 975, 1139, 1388
MboII	GAAGA	8 cut(s)	59, 122, 568, 1394, 1529, 1690, 1754, 2132
MflI	RGATCY	1 cut(s)	1415
MhlI	GDGCHC	5 cut(s)	187, 208, 1282, 1631, 1771
MlsI	TGGCCA	3 cut(s)	105, 471, 1364
MluNI	TGGCCA	3 cut(s)	105, 471, 1364
MlyI	GAGTC	3 cut(s)	164, 488, 1615
MmeI	TCCRAC	4 cut(s)	698, 1047, 1404, 1481
Mox20I	TGGCCA	3 cut(s)	105, 471, 1364
Mph1103I	ATGCAT	2 cut(s)	541, 778
MroXI	GAANNNNTTC	2 cut(s)	611, 621
MscI	TGGCCA	3 cut(s)	105, 471, 1364
MseI	TTAA	7 cut(s)	414, 728, 1127, 1223, 1436, 1824, 1937
MslI	CAYNNNNRTG	2 cut(s)	347, 2149
Msp20I	TGGCCA	3 cut(s)	105, 471, 1364
MspA1I	CMGCKG	3 cut(s)	1055, 1540, 2012
MspI	CCGG	2 cut(s)	174, 455
MspR9I	CCNGG	1 cut(s)	1781
Mva1269I	GAATGC	1 cut(s)	778
MvaI	CCWGG	1 cut(s)	1781
MvnI	CGCG	2 cut(s)	244, 246
MwoI	GCNNNNNNNGC	7 cut(s)	123, 509, 518, 1277, 1286, 1766, 1807
NcoI	CCATGG	1 cut(s)	964
NlaIV	GGNNCC	4 cut(s)	992, 1163, 1356, 1769
NmuCI	GTSAC	3 cut(s)	176, 1139, 1388
NsiI	ATGCAT	2 cut(s)	541, 778
NspI	RCATGY	1 cut(s)	2148
NspV	TTCGAA	2 cut(s)	8, 615
PagI	TCATGA	1 cut(s)	1254
PceI	AGGCCT	1 cut(s)	693
PciSI	GCTCTTC	1 cut(s)	1767
PcsI	WCGNNNNNNNCGW	1 cut(s)	763
PctI	GAATGC	1 cut(s)	778
PdmI	GAANNNNTTC	2 cut(s)	611, 621
PfeI	GAWTC	2 cut(s)	451, 1093
PflMI	CCANNNNNTGG	1 cut(s)	1171
PkrI	GCNGC	6 cut(s)	460, 1054, 1291, 1539, 1708, 1844
PleI	GAGTC	3 cut(s)	164, 488, 1615
PpsI	GAGTC	3 cut(s)	164, 488, 1615
Ppu21I	YACGTR	2 cut(s)	1147, 1214
PpuMI	RGGWCCY	2 cut(s)	1640, 2040
PsiI	TTATAA	1 cut(s)	1235
Psp124BI	GAGCTC	1 cut(s)	208
Psp5II	RGGWCCY	2 cut(s)	1640, 2040
Psp6I	CCWGG	1 cut(s)	1779
PspEI	GGTNACC	1 cut(s)	176
PspGI	CCWGG	1 cut(s)	1779
PspN4I	GGNNCC	4 cut(s)	992, 1163, 1356, 1769
PspOMI	GGGCCC	1 cut(s)	1767
PspPI	GGNCC	5 cut(s)	961, 1640, 1767, 1768, 2040
PspPPI	RGGWCCY	2 cut(s)	1640, 2040
PstI	CTGCAG	4 cut(s)	951, 1352, 1388, 1636
PstNI	CAGNNNCTG	1 cut(s)	1055
PsuI	RGATCY	1 cut(s)	1415
PvuII	CAGCTG	3 cut(s)	1055, 1540, 2012
RsaI	GTAC	4 cut(s)	84, 531, 649, 815
RsaNI	GTAC	4 cut(s)	83, 530, 648, 814
RseI	CAYNNNNRTG	2 cut(s)	347, 2149
SacI	GAGCTC	1 cut(s)	208
SapI	GCTCTTC	1 cut(s)	1767
SaqAI	TTAA	7 cut(s)	414, 728, 1127, 1223, 1436, 1824, 1937
SatI	GCNGC	6 cut(s)	459, 1053, 1290, 1538, 1707, 1843
Sau96I	GGNCC	5 cut(s)	961, 1640, 1767, 1768, 2040
SchI	GAGTC	3 cut(s)	164, 488, 1615
ScrFI	CCNGG	1 cut(s)	1781
SduI	GDGCHC	5 cut(s)	187, 208, 1282, 1631, 1771
SfaNI	GCATC	6 cut(s)	785, 1003, 1180, 1291, 1693, 1906
SfcI	CTRYAG	6 cut(s)	279, 947, 1348, 1384, 1599, 1632
SfuI	TTCGAA	2 cut(s)	8, 615
SinI	GGWCC	3 cut(s)	961, 1640, 2040
SmiMI	CAYNNNNRTG	2 cut(s)	347, 2149
SmlI	CTYRAG	2 cut(s)	563, 1411
SmoI	CTYRAG	2 cut(s)	563, 1411
SseBI	AGGCCT	1 cut(s)	693
SspMI	CTAG	5 cut(s)	53, 233, 410, 750, 1109
SstI	GAGCTC	1 cut(s)	208
StuI	AGGCCT	1 cut(s)	693
StyD4I	CCNGG	1 cut(s)	1779
StyI	CCWWGG	4 cut(s)	964, 1272, 1365, 1643
TaaI	ACNGT	8 cut(s)	182, 508, 612, 841, 1476, 1692, 1912, 2129
TaiI	ACGT	5 cut(s)	407, 653, 1149, 1216, 1243
TaqI	TCGA	9 cut(s)	8, 28, 35, 325, 615, 757, 1031, 1526, 1961
TatI	WGTACW	2 cut(s)	529, 813
TauI	GCSGC	2 cut(s)	461, 1845
TfiI	GAWTC	2 cut(s)	451, 1093
Tru1I	TTAA	7 cut(s)	414, 728, 1127, 1223, 1436, 1824, 1937
Tru9I	TTAA	7 cut(s)	414, 728, 1127, 1223, 1436, 1824, 1937
TseFI	GTSAC	3 cut(s)	176, 1139, 1388
TseI	GCWGC	4 cut(s)	1052, 1289, 1537, 1706
Tsp45I	GTSAC	3 cut(s)	176, 1139, 1388
TspDTI	ATGAA	9 cut(s)	123, 207, 1169, 1243, 1271, 1350, 1388, 1512, 1530
TspGWI	ACGGA	2 cut(s)	413, 1736
Van91I	CCANNNNNTGG	1 cut(s)	1171
VpaK11BI	GGWCC	3 cut(s)	961, 1640, 2040
XagI	CCTNNNNNAGG	1 cut(s)	1635
XapI	RAATTY	4 cut(s)	335, 445, 523, 1726
XceI	RCATGY	1 cut(s)	2148
XmiI	GTMKAC	1 cut(s)	168
XmnI	GAANNNNTTC	2 cut(s)	611, 621
XspI	CTAG	5 cut(s)	53, 233, 410, 750, 1109
Zsp2I	ATGCAT	2 cut(s)	541, 778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.