Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0007997

Physical Location & Seq

Genomic Coordinates Reverse (-)

5420103 .. 5425402

Gene Structure 5300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00283490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGGGTTGCGCTATCTAGCCATATCTGTGGTGTGTACAGCATTGAGCTTTGCTGGTCTCCAGTTTTGGACGGAAACGTCGCTAGTTAAACTAAAATCGGAGGGATTACTTGCGGAGAATTTGATTCCGGCGGCCAATGTTGGCCATGTTGTTGATCTGCTTTTGGACTCCTATGCCACTGTTGCACTGCTGGCAAATTTTGTACTCAATGCATTTATTTTACTCGTTCTATCTCTCAAGACTATATTCTTCGGGGAGTTGTATCCTTCTGAAACTCGGAAACTGTTCGAACGCCTTCTCAATTATATAGTTTACAAGGGTACGTTTCTACCACTGGTTATTCCTCCAACGATATATCATGCAGGCCTGTGGTCAGTCTGGTTGATCGTTCTTTGTTCTTTAAAGATGTTTCAAGCTTTGGCTAGAGATCGACTTGAACGATTGAATGCATCTCCTTCAGCTACACCATTGACATATTTTCGTGTGTATTCAGTGTTGTTGTTTGTGTTCACTGTGGACATTTTCTGGATAAGGCTTTGTGTGGTGATATACAGAACACTGGGTTTATCTATGTTTCTCCTGTTATTATTTGAGCCTTTCAGTATTGGATTTGAGACACTGCAGGCTATTTTGGTCCATGGATTTCAGTTACTTGATATATGGCTCCATCATTCAGGATGGAGCGATGCAAATTGTGAAAGATCAAAATTATTTGATACATCAGCAGCTGGTTTGTTGTTGGAATGGAAAGGCAGTCTTACTCGGAATCTGGGTTTTGTCCTAGACATGGCAACATTGTTAATGGCACTTGGTCACTACGTGCATATTTGGTGGCTCCACGGCATGGCATTCCATTTTGTGGATGCGATCCTTTTTCTAAACATACGTGCCTTGTTAACTGCTATTATAAAACGTATAAAAGGGTTCATGAAACTGAGAAAAGCCTTGGGTGCTCTCCATGCAGCCCTTCCAGATGCAACATCTGACGAACTACGAGCTTATGATGATGAATGCGCGATCTGCAGGGAACCTATGGCCAAGGCTAAAAAATTACACTGCAGTCACCTATTTCATCTTCCATGCTTGAGATCTTGGTTGGATCAAGGTTTAAATGAGGTATATTCTTGTCCAACTTGTCGCAAGCCACTGTTTGTAGGCAGACCAGAAAATGAAGCACATCCCCGCCATGAAGAAACTTCTAGTGATGAGCAGCTGGCTCGTCAAATAAGTTCAGGACTTGATAGACAAAATAGTTCTGGACATACACTCCCTACAGGTGTTTTCCCCAATCAGACTCAGAGCCCTGCAGAAGGTCCTTGGAGGACTGCAGCACTGGATCCAAATTGGTTGAACACCTGGCCAAGCCAGGGAGTTGATGGGGCAGGTCCTTCTACTGCTATCGGATCTGTTGGACTGGGGAGAGTACAGATGATGATGAGGCATCTTGCCTCTGTTGGAGAAACCTATGCCCAGACAGCCCTTGAAGATGGTGCGTGGAGCCTCTGGCCTATGAATCCATCTCAAGCTGCCGCAACTGGTCAACCCATTCCTCCTGCTGACGATGGAAGATACCCAGTAGGAACGCGCAATTTACATATGAGGTCCCCCTCACGCACTGTGAATGACAACATAGCAAACATACTTGCTATGGCCGAGACAGTACGGGAAGTTTTGCCTCATATGCCCGATGACATAATATTCCAGGATTTGCAGCGGACAAATTCTGTTACAGTTACTGTGAATAATCTTCTCCAAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010363 GO:0010498 GO:0010941 GO:0010942 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031347 GO:0031349 GO:0032446 GO:0034052 GO:0036211 GO:0043067 GO:0043068 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0051603 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071944 GO:0080134 GO:0080135 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

CUE zf-RING_2

Protein Analysis

586

Amino Acids

65.43

Weight (kDa)

6.68

Isoelectric Point (pI)

36.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_SYVN1_N	PF25563	54 - 315	2.8e-19	E3 ubiquitin-protein ligase synoviolin-like, TPR repeats
zf-RING_2	PF13639	336 - 380	3.3e-08	Ring finger domain
zf-C3HC4	PF00097	338 - 379	1.1e-06	Zinc finger, C3HC4 type (RING finger)
CUE	PF02845	550 - 586	1e-06	CUE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007997)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25230 AT4G25230 AT4G25230 AT5G51450 AT5G51450
fragaria_vesca	FvH4_7g27570 FvH4_7g27570 FvH4_7g27570
malus_domestica	MD07G1254100.v1.1
prunus_persica	Prupe.2G277400_v2.0.a1
pyrus_communis	pycom01g19350 pycom07g22680
rosa_chinensis	RchiOBHm_Chr1g0374441
rosa_laevigata	RLG00000026738
rosa_multiflora	Rmu_sc0006877.1_g000003 Rmu_ssc0000007.1_g000009
rosa_roxburghii	Rroxscaffold_4G00283490
rosa_rugosa	Rorug01G0382800 Rorug01G0382900
rosa_samantha	Rh1AG393900 Rh1BG358500 Rh1CG371500 Rh1DG389100
rosa_wichuraiana	Rw1G034220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	908
AasI	GACNNNNNNGTC	1 cut(s)	76
Acc36I	ACCTGC	1 cut(s)	1373
AccB7I	CCANNNNNTGG	2 cut(s)	844, 859
AccII	CGCG	2 cut(s)	1016, 1585
AciI	CCGC	5 cut(s)	113, 131, 1183, 1530, 1714
AclWI	GGATC	5 cut(s)	862, 1107, 1331, 1344, 1411
AcoI	YGGCCR	5 cut(s)	132, 142, 1035, 1358, 1650
AcsI	RAATTY	3 cut(s)	118, 196, 1720
AcuI	CTGAAG	1 cut(s)	441
AdeI	CACNNNGTG	1 cut(s)	820
AfaI	GTAC	5 cut(s)	37, 204, 322, 1425, 1662
AfiI	CCNNNNNNNGG	5 cut(s)	787, 844, 859, 1310, 1367
AgsI	TTSAA	5 cut(s)	413, 437, 445, 1351, 1484
AjnI	CCWGG	3 cut(s)	1355, 1365, 1701
AluBI	AGCT	7 cut(s)	48, 416, 461, 728, 998, 1213, 1526
AluI	AGCT	7 cut(s)	48, 416, 461, 728, 998, 1213, 1526
Alw21I	GWGCWC	1 cut(s)	955
Alw26I	GTCTC	3 cut(s)	62, 608, 1649
AlwI	GGATC	5 cut(s)	862, 1107, 1331, 1344, 1411
AlwNI	CAGNNNCTG	2 cut(s)	728, 1736
AoxI	GGCC	7 cut(s)	132, 142, 364, 1035, 1358, 1505, 1650
ApeKI	GCWGC	6 cut(s)	725, 962, 1210, 1328, 1526, 1711
ApoI	RAATTY	3 cut(s)	118, 196, 1720
Asp700I	GAANNNNTTC	2 cut(s)	284, 294
AspLEI	GCGC	3 cut(s)	12, 1016, 1587
AspS9I	GGNCC	4 cut(s)	634, 1313, 1385, 1602
AsuHPI	GGTGA	2 cut(s)	556, 1055
AsuII	TTCGAA	1 cut(s)	288
AvaII	GGWCC	4 cut(s)	634, 1313, 1385, 1602
BalI	TGGCCA	3 cut(s)	144, 1037, 1360
BamHI	GGATCC	1 cut(s)	1336
BanII	GRGCYC	1 cut(s)	1304
Bbv12I	GWGCWC	1 cut(s)	955
BbvI	GCAGC	6 cut(s)	737, 974, 1222, 1340, 1513, 1723
BccI	CCATC	6 cut(s)	672, 675, 1370, 1481, 1525, 1556
BceAI	ACGGC	1 cut(s)	856
BcgI	CGANNNNNNTGC	2 cut(s)	1199, 1233
BciT130I	CCWGG	3 cut(s)	1357, 1367, 1703
BciVI	GTATCC	1 cut(s)	273
BcoDI	GTCTC	3 cut(s)	62, 608, 1649
BfaI	CTAG	5 cut(s)	17, 83, 423, 782, 1200
BfmI	CTRYAG	6 cut(s)	620, 1021, 1057, 1272, 1305, 1326
BfuAI	ACCTGC	1 cut(s)	1373
BfuI	GTATCC	1 cut(s)	273
BglII	AGATCT	1 cut(s)	1088
BisI	GCNGC	8 cut(s)	132, 726, 963, 1211, 1329, 1527, 1530, 1712
BlsI	GCNGC	8 cut(s)	133, 727, 964, 1212, 1330, 1528, 1531, 1713
Bme1390I	CCNGG	3 cut(s)	1357, 1367, 1703
Bme18I	GGWCC	4 cut(s)	634, 1313, 1385, 1602
BmgT120I	GGNCC	4 cut(s)	634, 1313, 1385, 1602
BmiI	GGNNCC	6 cut(s)	665, 836, 1029, 1338, 1499, 1604
BmrFI	CCNGG	3 cut(s)	1357, 1367, 1703
BmrI	ACTGGG	3 cut(s)	569, 1424, 1568
BmsI	GCATC	5 cut(s)	458, 676, 853, 964, 1450
BmuI	ACTGGG	3 cut(s)	569, 1424, 1568
BpmI	CTGGAG	1 cut(s)	44
Bpu14I	TTCGAA	1 cut(s)	288
BpuEI	CTTGAG	3 cut(s)	221, 1105, 1506
BsaAI	YACGTR	2 cut(s)	820, 887
BsaI	GGTCTC	1 cut(s)	62
BsaJI	CCNNGG	6 cut(s)	637, 838, 945, 1038, 1316, 1366
BsaXI	ACNNNNNCTCC	2 cut(s)	1251, 1281
Bsc4I	CCNNNNNNNGG	5 cut(s)	787, 844, 859, 1310, 1367
Bse1I	ACTGG	7 cut(s)	61, 339, 564, 1338, 1419, 1540, 1574
BseBI	CCWGG	3 cut(s)	1357, 1367, 1703
BseDI	CCNNGG	6 cut(s)	637, 838, 945, 1038, 1316, 1366
BseGI	GGATG	3 cut(s)	683, 868, 1177
BseLI	CCNNNNNNNGG	5 cut(s)	787, 844, 859, 1310, 1367
BseMII	CTCAG	2 cut(s)	926, 1310
BseNI	ACTGG	7 cut(s)	61, 339, 564, 1338, 1419, 1540, 1574
BseXI	GCAGC	6 cut(s)	737, 974, 1222, 1340, 1513, 1723
Bsh1236I	CGCG	2 cut(s)	1016, 1585
BshFI	GGCC	7 cut(s)	134, 144, 366, 1037, 1360, 1507, 1652
BsiHKAI	GWGCWC	1 cut(s)	955
BsiSI	CCGG	1 cut(s)	128
BslFI	GGGAC	1 cut(s)	1588
BslI	CCNNNNNNNGG	5 cut(s)	787, 844, 859, 1310, 1367
BsmAI	GTCTC	3 cut(s)	62, 608, 1649
BsmFI	GGGAC	1 cut(s)	1588
BsmI	GAATGC	3 cut(s)	451, 848, 1016
BsnI	GGCC	7 cut(s)	134, 144, 366, 1037, 1360, 1507, 1652
Bso31I	GGTCTC	1 cut(s)	62
Bsp119I	TTCGAA	1 cut(s)	288
Bsp1286I	GDGCHC	2 cut(s)	955, 1304
Bsp1407I	TGTACA	1 cut(s)	35
Bsp19I	CCATGG	1 cut(s)	637
BspACI	CCGC	5 cut(s)	113, 131, 1183, 1530, 1714
BspANI	GGCC	7 cut(s)	134, 144, 366, 1037, 1360, 1507, 1652
BspCNI	CTCAG	2 cut(s)	927, 1309
BspFNI	CGCG	2 cut(s)	1016, 1585
BspHI	TCATGA	1 cut(s)	927
BspLI	GGNNCC	6 cut(s)	665, 836, 1029, 1338, 1499, 1604
BspMAI	CTGCAG	5 cut(s)	624, 1025, 1061, 1309, 1330
BspMI	ACCTGC	1 cut(s)	1373
BspPI	GGATC	5 cut(s)	862, 1107, 1331, 1344, 1411
BspT104I	TTCGAA	1 cut(s)	288
BspTNI	GGTCTC	1 cut(s)	62
BsrGI	TGTACA	1 cut(s)	35
BsrI	ACTGG	7 cut(s)	61, 339, 564, 1338, 1419, 1540, 1574
BssECI	CCNNGG	6 cut(s)	637, 838, 945, 1038, 1316, 1366
BssT1I	CCWWGG	4 cut(s)	637, 945, 1038, 1316
Bst2UI	CCWGG	3 cut(s)	1357, 1367, 1703
Bst4CI	ACNGT	8 cut(s)	181, 285, 514, 1149, 1618, 1660, 1732, 1738
BstAUI	TGTACA	1 cut(s)	35
BstBAI	YACGTR	2 cut(s)	820, 887
BstBI	TTCGAA	1 cut(s)	288
BstC8I	GCNNGC	5 cut(s)	192, 364, 624, 1142, 1215
BstDEI	CTNAG	2 cut(s)	935, 1296
BstDSI	CCRYGG	2 cut(s)	637, 838
BstENI	CCTNNNNNAGG	1 cut(s)	1308
BstF5I	GGATG	3 cut(s)	683, 868, 1177
BstFNI	CGCG	2 cut(s)	1016, 1585
BstHHI	GCGC	3 cut(s)	12, 1016, 1587
BstMAI	GTCTC	3 cut(s)	62, 608, 1649
BstMWI	GCNNNNNNNGC	7 cut(s)	182, 191, 950, 959, 1020, 1475, 1681
BstNI	CCWGG	3 cut(s)	1357, 1367, 1703
BstSCI	CCNGG	3 cut(s)	1355, 1365, 1701
BstSFI	CTRYAG	6 cut(s)	620, 1021, 1057, 1272, 1305, 1326
BstUI	CGCG	2 cut(s)	1016, 1585
BstV1I	GCAGC	6 cut(s)	737, 974, 1222, 1340, 1513, 1723
BstX2I	RGATCY	3 cut(s)	1088, 1336, 1403
BstXI	CCANNNNNNTGG	1 cut(s)	28
BstYI	RGATCY	3 cut(s)	1088, 1336, 1403
BsuI	GTATCC	1 cut(s)	273
BsuRI	GGCC	7 cut(s)	134, 144, 366, 1037, 1360, 1507, 1652
BtgI	CCRYGG	2 cut(s)	637, 838
BtgZI	GCGATG	1 cut(s)	699
BtsCI	GGATG	3 cut(s)	683, 868, 1177
BtsI	GCAGTG	3 cut(s)	185, 617, 1054
BveI	ACCTGC	1 cut(s)	1373
Cac8I	GCNNGC	5 cut(s)	192, 364, 624, 1142, 1215
CaiI	CAGNNNCTG	2 cut(s)	728, 1736
CciI	TCATGA	1 cut(s)	927
CfoI	GCGC	3 cut(s)	12, 1016, 1587
Cfr13I	GGNCC	4 cut(s)	634, 1313, 1385, 1602
Csp6I	GTAC	5 cut(s)	36, 203, 321, 1424, 1661
CviAII	CATG	9 cut(s)	146, 359, 638, 787, 844, 928, 959, 1080, 1187
CviQI	GTAC	5 cut(s)	36, 203, 321, 1424, 1661
DdeI	CTNAG	2 cut(s)	935, 1296
DraI	TTTAAA	2 cut(s)	402, 1110
DraIII	CACNNNGTG	1 cut(s)	820
DrdI	GACNNNNNNGTC	1 cut(s)	76
DseDI	GACNNNNNNGTC	1 cut(s)	76
EaeI	YGGCCR	5 cut(s)	132, 142, 1035, 1358, 1650
Eco130I	CCWWGG	4 cut(s)	637, 945, 1038, 1316
Eco147I	AGGCCT	1 cut(s)	366
Eco24I	GRGCYC	1 cut(s)	1304
Eco31I	GGTCTC	1 cut(s)	62
Eco47I	GGWCC	4 cut(s)	634, 1313, 1385, 1602
Eco57I	CTGAAG	1 cut(s)	441
EcoNI	CCTNNNNNAGG	1 cut(s)	1308
EcoO109I	RGGNCCY	3 cut(s)	1313, 1385, 1602
EcoRII	CCWGG	3 cut(s)	1355, 1365, 1701
EcoT14I	CCWWGG	4 cut(s)	637, 945, 1038, 1316
EcoT22I	ATGCAT	2 cut(s)	214, 451
EcoT38I	GRGCYC	1 cut(s)	1304
ErhI	CCWWGG	4 cut(s)	637, 945, 1038, 1316
FaeI	CATG	9 cut(s)	149, 362, 641, 790, 847, 931, 962, 1083, 1190
FalI	AAGNNNNNCTT	2 cut(s)	741, 773
FaqI	GGGAC	1 cut(s)	1588
FatI	CATG	9 cut(s)	145, 358, 637, 786, 843, 927, 958, 1079, 1186
FauI	CCCGC	1 cut(s)	1190
FauNDI	CATATG	2 cut(s)	1596, 1680
Fnu4HI	GCNGC	8 cut(s)	132, 726, 963, 1211, 1329, 1527, 1530, 1712
FokI	GGATG	3 cut(s)	690, 875, 1164
FriOI	GRGCYC	1 cut(s)	1304
Fsp4HI	GCNGC	8 cut(s)	132, 726, 963, 1211, 1329, 1527, 1530, 1712
FspBI	CTAG	5 cut(s)	17, 83, 423, 782, 1200
GlaI	GCGC	3 cut(s)	11, 1015, 1586
GluI	GCNGC	8 cut(s)	132, 726, 963, 1211, 1329, 1527, 1530, 1712
GsuI	CTGGAG	1 cut(s)	44
HaeIII	GGCC	7 cut(s)	134, 144, 366, 1037, 1360, 1507, 1652
HapII	CCGG	1 cut(s)	128
HhaI	GCGC	3 cut(s)	12, 1016, 1587
Hin1II	CATG	9 cut(s)	149, 362, 641, 790, 847, 931, 962, 1083, 1190
Hin6I	GCGC	3 cut(s)	10, 1014, 1585
HinP1I	GCGC	3 cut(s)	10, 1014, 1585
HincII	GTYRAC	2 cut(s)	897, 1541
HindII	GTYRAC	2 cut(s)	897, 1541
HindIII	AAGCTT	1 cut(s)	414
HinfI	GANTC	5 cut(s)	124, 167, 766, 1294, 1513
HpaI	GTTAAC	1 cut(s)	897
HpaII	CCGG	1 cut(s)	128
HphI	GGTGA	2 cut(s)	556, 1055
Hpy166II	GTNNAC	6 cut(s)	36, 313, 510, 517, 897, 1541
Hpy188I	TCNGA	8 cut(s)	100, 271, 279, 765, 985, 1293, 1299, 1403
Hpy188III	TCNNGA	7 cut(s)	238, 526, 675, 928, 971, 1233, 1257
Hpy8I	GTNNAC	6 cut(s)	36, 313, 510, 517, 897, 1541
Hpy99I	CGWCG	1 cut(s)	82
HpyAV	CCTTC	6 cut(s)	276, 305, 465, 977, 1304, 1398
HpyCH4III	ACNGT	8 cut(s)	181, 285, 514, 1149, 1618, 1660, 1732, 1738
HpyCH4IV	ACGT	5 cut(s)	77, 323, 819, 886, 913
HpyF10VI	GCNNNNNNNGC	7 cut(s)	182, 191, 950, 959, 1020, 1475, 1681
HpyF3I	CTNAG	2 cut(s)	935, 1296
HpySE526I	ACGT	5 cut(s)	77, 323, 819, 886, 913
Hsp92II	CATG	9 cut(s)	149, 362, 641, 790, 847, 931, 962, 1083, 1190
HspAI	GCGC	3 cut(s)	10, 1014, 1585
KspAI	GTTAAC	1 cut(s)	897
LmnI	GCTCC	4 cut(s)	669, 681, 840, 1497
Lsp1109I	GCAGC	6 cut(s)	737, 974, 1222, 1340, 1513, 1723
LweI	GCATC	5 cut(s)	458, 676, 853, 964, 1450
MaeI	CTAG	5 cut(s)	17, 83, 423, 782, 1200
MaeII	ACGT	5 cut(s)	77, 323, 819, 886, 913
MaeIII	GTNAC	5 cut(s)	648, 812, 1061, 1726, 1732
MboII	GAAGA	6 cut(s)	241, 1067, 1202, 1496, 1578, 1739
MflI	RGATCY	3 cut(s)	1088, 1336, 1403
MhlI	GDGCHC	2 cut(s)	955, 1304
MlsI	TGGCCA	3 cut(s)	144, 1037, 1360
MluCI	AATT	9 cut(s)	118, 196, 301, 691, 707, 1049, 1342, 1588, 1720
MluNI	TGGCCA	3 cut(s)	144, 1037, 1360
MlyI	GAGTC	2 cut(s)	161, 1288
MmeI	TCCRAC	6 cut(s)	371, 720, 1077, 1154, 1390, 1435
Mox20I	TGGCCA	3 cut(s)	144, 1037, 1360
Mph1103I	ATGCAT	2 cut(s)	214, 451
MroXI	GAANNNNTTC	2 cut(s)	284, 294
MscI	TGGCCA	3 cut(s)	144, 1037, 1360
MseI	TTAA	5 cut(s)	87, 401, 800, 896, 1109
MslI	CAYNNNNRTG	1 cut(s)	26
Msp20I	TGGCCA	3 cut(s)	144, 1037, 1360
MspA1I	CMGCKG	3 cut(s)	728, 1213, 1714
MspI	CCGG	1 cut(s)	128
MspR9I	CCNGG	3 cut(s)	1357, 1367, 1703
Mva1269I	GAATGC	3 cut(s)	451, 848, 1016
MvaI	CCWGG	3 cut(s)	1357, 1367, 1703
MvnI	CGCG	2 cut(s)	1016, 1585
MwoI	GCNNNNNNNGC	7 cut(s)	182, 191, 950, 959, 1020, 1475, 1681
NcoI	CCATGG	1 cut(s)	637
NdeI	CATATG	2 cut(s)	1596, 1680
NlaIII	CATG	9 cut(s)	149, 362, 641, 790, 847, 931, 962, 1083, 1190
NlaIV	GGNNCC	6 cut(s)	665, 836, 1029, 1338, 1499, 1604
NmeAIII	GCCGAG	1 cut(s)	1678
NmuCI	GTSAC	2 cut(s)	812, 1061
NsiI	ATGCAT	2 cut(s)	214, 451
NspV	TTCGAA	1 cut(s)	288
PagI	TCATGA	1 cut(s)	927
PceI	AGGCCT	1 cut(s)	366
PcsI	WCGNNNNNNNCGW	1 cut(s)	436
PctI	GAATGC	3 cut(s)	451, 848, 1016
PdmI	GAANNNNTTC	2 cut(s)	284, 294
PfeI	GAWTC	3 cut(s)	124, 766, 1513
PflMI	CCANNNNNTGG	2 cut(s)	844, 859
PfoI	TCCNGGA	1 cut(s)	1701
PkrI	GCNGC	8 cut(s)	133, 727, 964, 1212, 1330, 1528, 1531, 1713
PleI	GAGTC	2 cut(s)	161, 1288
PpsI	GAGTC	2 cut(s)	161, 1288
Ppu21I	YACGTR	2 cut(s)	820, 887
PpuMI	RGGWCCY	3 cut(s)	1313, 1385, 1602
PsiI	TTATAA	1 cut(s)	908
Psp5II	RGGWCCY	3 cut(s)	1313, 1385, 1602
Psp6I	CCWGG	3 cut(s)	1355, 1365, 1701
PspGI	CCWGG	3 cut(s)	1355, 1365, 1701
PspN4I	GGNNCC	6 cut(s)	665, 836, 1029, 1338, 1499, 1604
PspPI	GGNCC	4 cut(s)	634, 1313, 1385, 1602
PspPPI	RGGWCCY	3 cut(s)	1313, 1385, 1602
PstI	CTGCAG	5 cut(s)	624, 1025, 1061, 1309, 1330
PstNI	CAGNNNCTG	2 cut(s)	728, 1736
PsuI	RGATCY	3 cut(s)	1088, 1336, 1403
PvuII	CAGCTG	2 cut(s)	728, 1213
RsaI	GTAC	5 cut(s)	37, 204, 322, 1425, 1662
RsaNI	GTAC	5 cut(s)	36, 203, 321, 1424, 1661
RseI	CAYNNNNRTG	1 cut(s)	26
SaqAI	TTAA	5 cut(s)	87, 401, 800, 896, 1109
SatI	GCNGC	8 cut(s)	132, 726, 963, 1211, 1329, 1527, 1530, 1712
Sau96I	GGNCC	4 cut(s)	634, 1313, 1385, 1602
SchI	GAGTC	2 cut(s)	161, 1288
ScrFI	CCNGG	3 cut(s)	1357, 1367, 1703
SduI	GDGCHC	2 cut(s)	955, 1304
SfaNI	GCATC	5 cut(s)	458, 676, 853, 964, 1450
SfcI	CTRYAG	6 cut(s)	620, 1021, 1057, 1272, 1305, 1326
SfuI	TTCGAA	1 cut(s)	288
SinI	GGWCC	4 cut(s)	634, 1313, 1385, 1602
SmiMI	CAYNNNNRTG	1 cut(s)	26
SmlI	CTYRAG	3 cut(s)	236, 1084, 1521
SmoI	CTYRAG	3 cut(s)	236, 1084, 1521
Sse9I	AATT	9 cut(s)	118, 196, 301, 691, 707, 1049, 1342, 1588, 1720
SseBI	AGGCCT	1 cut(s)	366
SsiI	CCGC	5 cut(s)	113, 131, 1183, 1530, 1714
SspI	AATATT	1 cut(s)	1698
SspMI	CTAG	5 cut(s)	17, 83, 423, 782, 1200
StuI	AGGCCT	1 cut(s)	366
StyD4I	CCNGG	3 cut(s)	1355, 1365, 1701
StyI	CCWWGG	4 cut(s)	637, 945, 1038, 1316
TaaI	ACNGT	8 cut(s)	181, 285, 514, 1149, 1618, 1660, 1732, 1738
TaiI	ACGT	5 cut(s)	80, 326, 822, 889, 916
TaqI	TCGA	2 cut(s)	288, 430
TasI	AATT	9 cut(s)	118, 196, 301, 691, 707, 1049, 1342, 1588, 1720
TatI	WGTACW	3 cut(s)	35, 202, 1423
TauI	GCSGC	2 cut(s)	134, 1532
TfiI	GAWTC	3 cut(s)	124, 766, 1513
Tru1I	TTAA	5 cut(s)	87, 401, 800, 896, 1109
Tru9I	TTAA	5 cut(s)	87, 401, 800, 896, 1109
TseFI	GTSAC	2 cut(s)	812, 1061
TseI	GCWGC	6 cut(s)	725, 962, 1210, 1328, 1526, 1711
Tsp45I	GTSAC	2 cut(s)	812, 1061
TspDTI	ATGAA	7 cut(s)	916, 944, 1023, 1061, 1185, 1203, 1526
TspGWI	ACGGA	1 cut(s)	86
Van91I	CCANNNNNTGG	2 cut(s)	844, 859
VpaK11BI	GGWCC	4 cut(s)	634, 1313, 1385, 1602
XagI	CCTNNNNNAGG	1 cut(s)	1308
XapI	RAATTY	3 cut(s)	118, 196, 1720
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1373
XmnI	GAANNNNTTC	2 cut(s)	284, 294
XspI	CTAG	5 cut(s)	17, 83, 423, 782, 1200
Zsp2I	ATGCAT	2 cut(s)	214, 451

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.