Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0004897

Physical Location & Seq

Genomic Coordinates Reverse (-)

16328303 .. 16333253

Gene Structure 4951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027881

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGAATCAAAAGGGGACCAAGTTTGTAAGGTTTGAGGATTGGCATTCAGAGGTATCTACAAGTTCTGAGAGAGAATTTTCAACTGATCATGGACGAAACCCAAGAAGAGCCAGGCCATCTGTGAATGCAGTATTGAGTAGTATTAGGAGAGGATTCGATAGGGGTTCAGATAGGTTTAAAAGCTTCAAAAAACCATTAAGTCCCACTTCTGTAGGTAAGCAGCCAGCAAAGGAGTCAGGCCATCGGAAGAACATTCTCGACCCTCAGGGATCATTTCTTCAGAGTTGGAATAAGATATTTGTGATATCTTGTGTCATAGCTGTGTCATTGGACCCATTGTTTCTTTATACTTCAATGGTTGATGGCAATAAGAAATGCCTTGGTTTGGACAGAAGGCTGCAGATCATTGCTTGTGCTCTTCGTTCATTCACCGATGTTTTCCATATACTTCATATTATTTTTCAGTTCCGCACTGGGTTTATTGCCCCATCTTCTAGAGTATTCGGAAGGGGTGAGCTAAATGATGACCCTGTGGCCATTGCAAAAAGATACTTGTATTCATACTTCATCATAGATGTTCTGGCTATTCTTCCTCTGCCACAGGCTGTAGTTTTTGTCGTAGTCCCTAAAATAGAACGTCCAGTTCCAATGGCCGCAAAGAACTTGTTGACGATTGTGATTGTTTGCCAATATGTGCCAAGACTTATACGAATCTATCCGCTATACAAAGAAGTTGAAACAACTTCTGGCTTCCTGACTGAAACAGCATGGGCTGCAGCTGCATTCAATCTTTTGCTCTACATGTTAGCCAGCCATGTAGTTGGAGCATTATGGTACTTGTTCTCCATAGAACGAGAGTATAGTTGCTGGCGTGATCATTGTGGAATAGATGTAGAATGTAAGAAGTACCTGTACTGTGGCTATGTCAATAGAACTAACACGACAATTGTTGACAATTTAAAAGCTTCTTGCCCTCTTATCAACCCTGAGGACATTACAAATTCATCTGTGTTCAACTTTGGAATATTGTTCGAGGCTCTGGAGTCTGGTGTGATGGAGACGACAGATTTTCCGAAGAAATTTTTATTCTGCTTCTGGTGGGGTCTGCGCAGCCTTAGTTCTCTAGGTCAAAACCTCAAAACAAGCACTTTTGTTTGGGAGATACTCTTTGCAGTCTTCATTTCTATCTTCGGACTGGTGCTATTTTCATTGCTCATTGGAAATATGCAGAAATTTCTGCAGTCAACAACTGTGAGAGTTGAAGAAATGAGAGTGAAAAGGCGAGATGCAGAACAGTGGATGTCCCACCGAATGCTCCCGGAGAACCTGAAGGCAAGGGTCAGACGCTATGATCAGTATAAATGGCAAGAAACAAGAGGTGTTGAGGAAGATACTCTAGTTCGTAACCTTCCTAAAGACTTGAGGAAGGACATAAAACGCCATCTTTGCTTGGCTCTTGTTAAGAGAGTGCCAATGTTCGAGAAAATGGATGACCGACTGATGGATGCCCTGTGTGATCATCTCAAGCCAGTTCTTTTCACAGACGACAGCTTCATCATCCGAGAGGGTGACCCAGTTGATGAGATGCTATTTGTTATGCGTGGAAACTTAGCAACTATGACAACTAATGGTGGAAGAACTGGCTTCTTTAACTGTGCTGATCTTAAGGCCGGTGACTTCTGTGGAGAAGAGCTTCTTACATGGGCATTGGATCCAAAATCCACTTCCAATCTTCCTATCTCAACTAGAACAGTGGAAGCTAGAACTGAGGTTGAAGCATTTGCTCTCAGGGCTGATGATTTGAAGTTTGTTGCCTCCCAGTTTCGGCGCCTGCACAGCAGGCAGATCCAACATACTTTCAGGTTTTACTCCATGCAGTGGAGGACATGGGCAGCCTGTTTCATACAAGCAGCTTGGCGCCGGCACTGCAAGAGAGAGCTTGAGAAGTCATTACATGAAGCAGAAGACAAGCTGCATGATGCTTTTGCAAGAGATGCCGGAACCTCACCAGGCCTTGTTGCCACTGTATATGCATCAAGGTTTGCAGCCAATGCACTACGCGCCTTGCGACAGAAGGGTGTGCGTGACACTAGACCTTTACCAGCATTGACGCCACTGCTACTTCAGAAGCCCGCTGAGCCTGATTTTACTGCAGAACATCAGGAGTCACTGCTACTTCAGAAGCCCGCTGAGCCTGATTTTACTGCAGAACATCATGGAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

742

Amino Acids

84.99

Weight (kDa)

9.08

Isoelectric Point (pI)

44.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	100 - 418	2.5e-15	Ion transport protein
cNMP_binding	PF00027	513 - 604	1.1e-06	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01340 AT1G01340 AT2G46430 AT2G46430 AT4G01010 AT4G01010
fragaria_vesca	FvH4_7g16300 FvH4_7g16300
malus_domestica	MD01G1079600.v1.1 MD07G1148400.v1.1
prunus_persica	Prupe.2G186700_v2.0.a1 Prupe.2G186700_v2.0.a1 Prupe.2G186700_v2.0.a1 Prupe.2G186900_v2.0.a1 Prupe.2G186900_v2.0.a1 Prupe.2G186900_v2.0.a1
pyrus_communis	pycom01g10790 pycom07g14740
rosa_chinensis	RchiOBHm_Chr1g0359311
rosa_laevigata	RLG00000027881
rosa_multiflora	Rmu_sc0005090.1_g000001 Rmu_sc0017222.1_g000004
rosa_roxburghii	Rroxscaffold_4G00297110
rosa_rugosa	Rorug01G0269500 Rorug01G0269600
rosa_samantha	Rh1AG283400 Rh1BG249600 Rh1CG267500 Rh1DG278500
rosa_wichuraiana	Rw1G025160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1109
AccB1I	GGYRCC	2 cut(s)	1827, 1917
AccB7I	CCANNNNNTGG	1 cut(s)	1878
AccII	CGCG	1 cut(s)	2061
AciI	CCGC	5 cut(s)	469, 654, 719, 2133, 2187
AclWI	GGATC	4 cut(s)	277, 1706, 1719, 1840
AcoI	YGGCCR	2 cut(s)	534, 651
AcsI	RAATTY	4 cut(s)	74, 1000, 1079, 1232
AcuI	CTGAAG	4 cut(s)	263, 1349, 2108, 2162
AcyI	GRCGYC	3 cut(s)	1828, 1918, 2111
AfaI	GTAC	3 cut(s)	836, 908, 914
AfiI	CCNNNNNNNGG	4 cut(s)	385, 1501, 1824, 1878
AflII	CTTAAG	1 cut(s)	1664
AflIII	ACRYGT	1 cut(s)	801
AgsI	TTSAA	9 cut(s)	81, 187, 354, 737, 787, 1015, 1262, 1775, 1804
AjnI	CCWGG	2 cut(s)	110, 2008
AjuI	GAANNNNNNNTTGG	2 cut(s)	1708, 1740
Alw21I	GWGCWC	1 cut(s)	418
Alw26I	GTCTC	1 cut(s)	1052
AlwI	GGATC	4 cut(s)	277, 1706, 1719, 1840
AoxI	GGCC	6 cut(s)	113, 238, 534, 651, 1668, 2011
ApoI	RAATTY	4 cut(s)	74, 1000, 1079, 1232
Asp700I	GAANNNNTTC	1 cut(s)	1692
AspLEI	GCGC	4 cut(s)	1110, 1830, 1920, 2063
AspS9I	GGNCC	2 cut(s)	15, 331
AsuC2I	CCSGG	1 cut(s)	1319
AsuHPI	GGTGA	5 cut(s)	421, 524, 1580, 1685, 1998
AvaII	GGWCC	2 cut(s)	15, 331
AxyI	CCTNAGG	2 cut(s)	264, 987
BaeI	ACNNNNGTAYC	2 cut(s)	1383, 1416
BalI	TGGCCA	1 cut(s)	536
BamHI	GGATCC	1 cut(s)	1711
BanI	GGYRCC	2 cut(s)	1827, 1917
BarI	GAAGNNNNNNTAC	4 cut(s)	548, 580, 896, 928
BbsI	GAAGAC	2 cut(s)	1168, 1971
Bbv12I	GWGCWC	1 cut(s)	418
BccI	CCATC	7 cut(s)	124, 249, 356, 496, 1048, 1449, 1495
BciT130I	CCWGG	2 cut(s)	112, 2010
BclI	TGATCA	4 cut(s)	85, 874, 1351, 1516
BcnI	CCSGG	1 cut(s)	1319
BcoDI	GTCTC	1 cut(s)	1052
BfaI	CTAG	6 cut(s)	495, 1124, 1397, 1746, 1761, 2091
BfmI	CTRYAG	7 cut(s)	210, 398, 606, 774, 1238, 2151, 2205
BfoI	RGCGCY	2 cut(s)	1831, 1921
BfrI	CTTAAG	1 cut(s)	1664
BlpI	GCTNAGC	2 cut(s)	2136, 2190
Bme1390I	CCNGG	3 cut(s)	112, 1319, 2010
Bme18I	GGWCC	2 cut(s)	15, 331
BmgT120I	GGNCC	2 cut(s)	15, 331
BmiI	GGNNCC	6 cut(s)	16, 333, 1713, 1829, 1919, 2002
BmrFI	CCNGG	3 cut(s)	112, 1319, 2010
BmrI	ACTGGG	3 cut(s)	483, 1568, 1813
BmsI	GCATC	6 cut(s)	1276, 1495, 1575, 1969, 1984, 2042
BmuI	ACTGGG	3 cut(s)	483, 1568, 1813
BpiI	GAAGAC	2 cut(s)	1168, 1971
BpmI	CTGGAG	1 cut(s)	1061
Bpu1102I	GCTNAGC	2 cut(s)	2136, 2190
BpuEI	CTTGAG	3 cut(s)	1441, 1508, 1961
BpuMI	CCSGG	1 cut(s)	1319
BsaHI	GRCGYC	3 cut(s)	1828, 1918, 2111
BsaJI	CCNNGG	1 cut(s)	379
BsaXI	ACNNNNNCTCC	2 cut(s)	827, 857
Bsc4I	CCNNNNNNNGG	4 cut(s)	385, 1501, 1824, 1878
Bse118I	RCCGGY	2 cut(s)	1670, 1920
Bse1I	ACTGG	7 cut(s)	478, 641, 1200, 1529, 1574, 1645, 1819
Bse21I	CCTNAGG	2 cut(s)	264, 987
Bse3DI	GCAATG	3 cut(s)	405, 537, 1208
BseBI	CCWGG	2 cut(s)	112, 2010
BseDI	CCNNGG	1 cut(s)	379
BseGI	GGATG	4 cut(s)	1305, 1495, 1510, 1557
BseLI	CCNNNNNNNGG	4 cut(s)	385, 1501, 1824, 1878
BseMI	GCAATG	3 cut(s)	405, 537, 1208
BseMII	CTCAG	7 cut(s)	57, 278, 978, 1758, 1801, 2127, 2181
BseNI	ACTGG	7 cut(s)	478, 641, 1200, 1529, 1574, 1645, 1819
BsgI	GTGCAG	1 cut(s)	1817
Bsh1236I	CGCG	1 cut(s)	2061
BshFI	GGCC	6 cut(s)	115, 240, 536, 653, 1670, 2013
BshNI	GGYRCC	2 cut(s)	1827, 1917
BsiHKAI	GWGCWC	1 cut(s)	418
BsiSI	CCGG	4 cut(s)	1319, 1671, 1921, 1998
BslFI	GGGAC	4 cut(s)	28, 186, 608, 1288
BslI	CCNNNNNNNGG	4 cut(s)	385, 1501, 1824, 1878
BsmAI	GTCTC	1 cut(s)	1052
BsmBI	CGTCTC	1 cut(s)	1052
BsmFI	GGGAC	4 cut(s)	28, 186, 608, 1288
BsmI	GAATGC	4 cut(s)	43, 130, 782, 1317
BsnI	GGCC	6 cut(s)	115, 240, 536, 653, 1670, 2013
Bsp1286I	GDGCHC	1 cut(s)	418
Bsp143I	GATC	9 cut(s)	85, 269, 402, 874, 1351, 1516, 1660, 1711, 1845
Bsp1720I	GCTNAGC	2 cut(s)	2136, 2190
BspACI	CCGC	5 cut(s)	469, 654, 719, 2133, 2187
BspANI	GGCC	6 cut(s)	115, 240, 536, 653, 1670, 2013
BspCNI	CTCAG	7 cut(s)	58, 277, 979, 1759, 1800, 2128, 2182
BspFNI	CGCG	1 cut(s)	2061
BspLI	GGNNCC	6 cut(s)	16, 333, 1713, 1829, 1919, 2002
BspMAI	CTGCAG	5 cut(s)	402, 778, 1242, 2155, 2209
BspPI	GGATC	4 cut(s)	277, 1706, 1719, 1840
BspQI	GCTCTTC	3 cut(s)	100, 423, 1683
BspT107I	GGYRCC	2 cut(s)	1827, 1917
BspTI	CTTAAG	1 cut(s)	1664
BsrDI	GCAATG	3 cut(s)	405, 537, 1208
BsrFI	RCCGGY	2 cut(s)	1670, 1920
BsrI	ACTGG	7 cut(s)	478, 641, 1200, 1529, 1574, 1645, 1819
BssAI	RCCGGY	2 cut(s)	1670, 1920
BssECI	CCNNGG	1 cut(s)	379
BssMI	GATC	9 cut(s)	85, 269, 402, 874, 1351, 1516, 1660, 1711, 1845
BssNI	GRCGYC	3 cut(s)	1828, 1918, 2111
BssT1I	CCWWGG	1 cut(s)	379
Bst2UI	CCWGG	2 cut(s)	112, 2010
Bst4CI	ACNGT	6 cut(s)	917, 1252, 1296, 1655, 1753, 2026
Bst6I	CTCTTC	3 cut(s)	100, 423, 1683
BstACI	GRCGYC	3 cut(s)	1828, 1918, 2111
BstAFI	CTTAAG	1 cut(s)	1664
BstAPI	GCANNNNNTGC	3 cut(s)	773, 1994, 2051
BstC8I	GCNNGC	8 cut(s)	225, 811, 869, 1832, 1841, 1922, 2133, 2187
BstDEI	CTNAG	9 cut(s)	66, 264, 987, 1115, 1609, 1767, 1787, 2136, 2190
BstEII	GGTNACC	1 cut(s)	1568
BstF5I	GGATG	4 cut(s)	1305, 1495, 1510, 1557
BstFNI	CGCG	1 cut(s)	2061
BstH2I	RGCGCY	2 cut(s)	1831, 1921
BstHHI	GCGC	4 cut(s)	1110, 1830, 1920, 2063
BstKTI	GATC	9 cut(s)	88, 272, 405, 877, 1354, 1519, 1663, 1714, 1848
BstMAI	GTCTC	1 cut(s)	1052
BstMBI	GATC	9 cut(s)	85, 269, 402, 874, 1351, 1516, 1660, 1711, 1845
BstNI	CCWGG	2 cut(s)	112, 2010
BstNSI	RCATGY	1 cut(s)	805
BstPI	GGTNACC	1 cut(s)	1568
BstSCI	CCNGG	3 cut(s)	110, 1317, 2008
BstSFI	CTRYAG	7 cut(s)	210, 398, 606, 774, 1238, 2151, 2205
BstUI	CGCG	1 cut(s)	2061
BstV2I	GAAGAC	2 cut(s)	1168, 1971
BstX2I	RGATCY	2 cut(s)	1711, 1845
BstXI	CCANNNNNNTGG	1 cut(s)	821
BstYI	RGATCY	2 cut(s)	1711, 1845
Bsu36I	CCTNAGG	2 cut(s)	264, 987
BsuRI	GGCC	6 cut(s)	115, 240, 536, 653, 1670, 2013
BtsCI	GGATG	4 cut(s)	1305, 1495, 1510, 1557
BtsI	GCAGTG	4 cut(s)	1883, 1924, 2114, 2168
BtsIMutI	CAGTG	8 cut(s)	471, 1301, 1758, 1883, 1924, 2022, 2114, 2168
Cac8I	GCNNGC	8 cut(s)	225, 811, 869, 1832, 1841, 1922, 2133, 2187
CfoI	GCGC	4 cut(s)	1110, 1830, 1920, 2063
Cfr10I	RCCGGY	2 cut(s)	1670, 1920
Cfr13I	GGNCC	2 cut(s)	15, 331
CseI	GACGC	2 cut(s)	1353, 2119
Csp6I	GTAC	3 cut(s)	835, 907, 913
CviQI	GTAC	3 cut(s)	835, 907, 913
DdeI	CTNAG	9 cut(s)	66, 264, 987, 1115, 1609, 1767, 1787, 2136, 2190
DinI	GGCGCC	2 cut(s)	1829, 1919
DpnI	GATC	9 cut(s)	87, 271, 404, 876, 1353, 1518, 1662, 1713, 1847
DpnII	GATC	9 cut(s)	85, 269, 402, 874, 1351, 1516, 1660, 1711, 1845
DraI	TTTAAA	2 cut(s)	178, 960
EaeI	YGGCCR	2 cut(s)	534, 651
Eam1104I	CTCTTC	3 cut(s)	100, 423, 1683
EarI	CTCTTC	3 cut(s)	100, 423, 1683
Eco130I	CCWWGG	1 cut(s)	379
Eco147I	AGGCCT	1 cut(s)	2013
Eco32I	GATATC	1 cut(s)	306
Eco47I	GGWCC	2 cut(s)	15, 331
Eco57I	CTGAAG	4 cut(s)	263, 1349, 2108, 2162
Eco81I	CCTNAGG	2 cut(s)	264, 987
Eco91I	GGTNACC	1 cut(s)	1568
EcoO65I	GGTNACC	1 cut(s)	1568
EcoRII	CCWGG	2 cut(s)	110, 2008
EcoRV	GATATC	1 cut(s)	306
EcoT14I	CCWWGG	1 cut(s)	379
EcoT22I	ATGCAT	1 cut(s)	2035
EgeI	GGCGCC	2 cut(s)	1829, 1919
EheI	GGCGCC	2 cut(s)	1829, 1919
ErhI	CCWWGG	1 cut(s)	379
Esp3I	CGTCTC	1 cut(s)	1052
FalI	AAGNNNNNCTT	4 cut(s)	190, 222, 1680, 1712
FaqI	GGGAC	4 cut(s)	28, 186, 608, 1288
FauI	CCCGC	2 cut(s)	2140, 2194
FbaI	TGATCA	4 cut(s)	85, 874, 1351, 1516
FokI	GGATG	4 cut(s)	1312, 1502, 1517, 1544
FspBI	CTAG	6 cut(s)	495, 1124, 1397, 1746, 1761, 2091
FspI	TGCGCA	1 cut(s)	1109
GlaI	GCGC	4 cut(s)	1109, 1829, 1919, 2062
GsuI	CTGGAG	1 cut(s)	1061
HaeII	RGCGCY	2 cut(s)	1831, 1921
HaeIII	GGCC	6 cut(s)	115, 240, 536, 653, 1670, 2013
HapII	CCGG	4 cut(s)	1319, 1671, 1921, 1998
HgaI	GACGC	2 cut(s)	1353, 2119
HhaI	GCGC	4 cut(s)	1110, 1830, 1920, 2063
Hin1I	GRCGYC	3 cut(s)	1828, 1918, 2111
Hin6I	GCGC	4 cut(s)	1108, 1828, 1918, 2061
HinP1I	GCGC	4 cut(s)	1108, 1828, 1918, 2061
HincII	GTYRAC	3 cut(s)	669, 952, 1245
HindII	GTYRAC	3 cut(s)	669, 952, 1245
HindIII	AAGCTT	2 cut(s)	181, 963
HinfI	GANTC	6 cut(s)	4, 153, 233, 711, 1043, 2165
HpaII	CCGG	4 cut(s)	1319, 1671, 1921, 1998
HphI	GGTGA	5 cut(s)	421, 524, 1580, 1685, 1998
Hpy166II	GTNNAC	3 cut(s)	669, 952, 1245
Hpy188III	TCNNGA	6 cut(s)	257, 495, 754, 1040, 1480, 2162
Hpy8I	GTNNAC	3 cut(s)	669, 952, 1245
HpyAV	CCTTC	6 cut(s)	387, 501, 1324, 1418, 1420, 2068
HpyCH4III	ACNGT	6 cut(s)	917, 1252, 1296, 1655, 1753, 2026
HpyCH4IV	ACGT	1 cut(s)	637
HpyF3I	CTNAG	9 cut(s)	66, 264, 987, 1115, 1609, 1767, 1787, 2136, 2190
HpySE526I	ACGT	1 cut(s)	637
Hsp92I	GRCGYC	3 cut(s)	1828, 1918, 2111
HspAI	GCGC	4 cut(s)	1108, 1828, 1918, 2061
KasI	GGCGCC	2 cut(s)	1827, 1917
KroI	GCCGGC	1 cut(s)	1920
KroNI	GCCGGC	1 cut(s)	1922
Ksp22I	TGATCA	4 cut(s)	85, 874, 1351, 1516
Kzo9I	GATC	9 cut(s)	85, 269, 402, 874, 1351, 1516, 1660, 1711, 1845
LguI	GCTCTTC	3 cut(s)	100, 423, 1683
LmnI	GCTCC	2 cut(s)	824, 1320
LweI	GCATC	6 cut(s)	1276, 1495, 1575, 1969, 1984, 2042
MaeI	CTAG	6 cut(s)	495, 1124, 1397, 1746, 1761, 2091
MaeII	ACGT	1 cut(s)	637
MaeIII	GTNAC	5 cut(s)	1403, 1568, 1673, 2084, 2166
MalI	GATC	9 cut(s)	87, 271, 404, 876, 1353, 1518, 1662, 1713, 1847
MboI	GATC	9 cut(s)	85, 269, 402, 874, 1351, 1516, 1660, 1711, 1845
MfeI	CAATTG	1 cut(s)	945
MflI	RGATCY	2 cut(s)	1711, 1845
MhlI	GDGCHC	1 cut(s)	418
MlsI	TGGCCA	1 cut(s)	536
MluCI	AATT	6 cut(s)	74, 945, 955, 1000, 1079, 1232
MluNI	TGGCCA	1 cut(s)	536
Mly113I	GGCGCC	2 cut(s)	1828, 1918
MlyI	GAGTC	3 cut(s)	242, 1052, 2174
MmeI	TCCRAC	3 cut(s)	266, 802, 1873
Mox20I	TGGCCA	1 cut(s)	536
Mph1103I	ATGCAT	1 cut(s)	2035
MroNI	GCCGGC	1 cut(s)	1920
MroXI	GAANNNNTTC	1 cut(s)	1692
MscI	TGGCCA	1 cut(s)	536
MseI	TTAA	6 cut(s)	177, 197, 959, 1461, 1650, 1665
MslI	CAYNNNNRTG	1 cut(s)	320
Msp20I	TGGCCA	1 cut(s)	536
MspA1I	CMGCKG	3 cut(s)	779, 2135, 2189
MspCI	CTTAAG	1 cut(s)	1664
MspI	CCGG	4 cut(s)	1319, 1671, 1921, 1998
MspR9I	CCNGG	3 cut(s)	112, 1319, 2010
MunI	CAATTG	1 cut(s)	945
Mva1269I	GAATGC	4 cut(s)	43, 130, 782, 1317
MvaI	CCWGG	2 cut(s)	112, 2010
MvnI	CGCG	1 cut(s)	2061
NaeI	GCCGGC	1 cut(s)	1922
NarI	GGCGCC	2 cut(s)	1828, 1918
NciI	CCSGG	1 cut(s)	1319
NdeII	GATC	9 cut(s)	85, 269, 402, 874, 1351, 1516, 1660, 1711, 1845
NgoMIV	GCCGGC	1 cut(s)	1920
NlaIV	GGNNCC	6 cut(s)	16, 333, 1713, 1829, 1919, 2002
NmuCI	GTSAC	4 cut(s)	1568, 1673, 2084, 2166
NsbI	TGCGCA	1 cut(s)	1109
NsiI	ATGCAT	1 cut(s)	2035
NspI	RCATGY	1 cut(s)	805
PceI	AGGCCT	1 cut(s)	2013
PciI	ACATGT	1 cut(s)	801
PciSI	GCTCTTC	3 cut(s)	100, 423, 1683
PcsI	WCGNNNNNNNCGW	1 cut(s)	2065
PctI	GAATGC	4 cut(s)	43, 130, 782, 1317
PdiI	GCCGGC	1 cut(s)	1922
PdmI	GAANNNNTTC	1 cut(s)	1692
PfeI	GAWTC	3 cut(s)	4, 153, 711
PflMI	CCANNNNNTGG	1 cut(s)	1878
PfoI	TCCNGGA	1 cut(s)	1317
PleI	GAGTC	3 cut(s)	241, 1051, 2173
PluTI	GGCGCC	2 cut(s)	1831, 1921
PpsI	GAGTC	3 cut(s)	241, 1051, 2173
PscI	ACATGT	1 cut(s)	801
Psp6I	CCWGG	2 cut(s)	110, 2008
PspEI	GGTNACC	1 cut(s)	1568
PspGI	CCWGG	2 cut(s)	110, 2008
PspN4I	GGNNCC	6 cut(s)	16, 333, 1713, 1829, 1919, 2002
PspPI	GGNCC	2 cut(s)	15, 331
PstI	CTGCAG	5 cut(s)	402, 778, 1242, 2155, 2209
PsuI	RGATCY	2 cut(s)	1711, 1845
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	3 cut(s)	836, 908, 914
RsaNI	GTAC	3 cut(s)	835, 907, 913
RseI	CAYNNNNRTG	1 cut(s)	320
SapI	GCTCTTC	3 cut(s)	100, 423, 1683
SaqAI	TTAA	6 cut(s)	177, 197, 959, 1461, 1650, 1665
Sau3AI	GATC	9 cut(s)	85, 269, 402, 874, 1351, 1516, 1660, 1711, 1845
Sau96I	GGNCC	2 cut(s)	15, 331
SchI	GAGTC	3 cut(s)	242, 1052, 2174
ScrFI	CCNGG	3 cut(s)	112, 1319, 2010
SduI	GDGCHC	1 cut(s)	418
SfaNI	GCATC	6 cut(s)	1276, 1495, 1575, 1969, 1984, 2042
SfcI	CTRYAG	7 cut(s)	210, 398, 606, 774, 1238, 2151, 2205
SfoI	GGCGCC	2 cut(s)	1829, 1919
SinI	GGWCC	2 cut(s)	15, 331
SmiMI	CAYNNNNRTG	1 cut(s)	320
SmlI	CTYRAG	4 cut(s)	1420, 1523, 1664, 1940
SmoI	CTYRAG	4 cut(s)	1420, 1523, 1664, 1940
Sse9I	AATT	6 cut(s)	74, 945, 955, 1000, 1079, 1232
SseBI	AGGCCT	1 cut(s)	2013
SsiI	CCGC	5 cut(s)	469, 654, 719, 2133, 2187
SspDI	GGCGCC	2 cut(s)	1827, 1917
SspI	AATATT	1 cut(s)	1026
SspMI	CTAG	6 cut(s)	495, 1124, 1397, 1746, 1761, 2091
StuI	AGGCCT	1 cut(s)	2013
StyD4I	CCNGG	3 cut(s)	110, 1317, 2008
StyI	CCWWGG	1 cut(s)	379
TaaI	ACNGT	6 cut(s)	917, 1252, 1296, 1655, 1753, 2026
TaiI	ACGT	1 cut(s)	640
TaqI	TCGA	4 cut(s)	156, 258, 1032, 1479
TaqII	GACCGA	1 cut(s)	1509
TasI	AATT	6 cut(s)	74, 945, 955, 1000, 1079, 1232
TatI	WGTACW	1 cut(s)	912
TauI	GCSGC	1 cut(s)	656
TfiI	GAWTC	3 cut(s)	4, 153, 711
Tru1I	TTAA	6 cut(s)	177, 197, 959, 1461, 1650, 1665
Tru9I	TTAA	6 cut(s)	177, 197, 959, 1461, 1650, 1665
TscAI	CASTG	8 cut(s)	478, 1301, 1758, 1883, 1931, 2029, 2121, 2175
TseFI	GTSAC	4 cut(s)	1568, 1673, 2084, 2166
Tsp45I	GTSAC	4 cut(s)	1568, 1673, 2084, 2166
TspRI	CASTG	8 cut(s)	478, 1301, 1758, 1883, 1931, 2029, 2121, 2175
Van91I	CCANNNNNTGG	1 cut(s)	1878
Vha464I	CTTAAG	1 cut(s)	1664
VpaK11BI	GGWCC	2 cut(s)	15, 331
XapI	RAATTY	4 cut(s)	74, 1000, 1079, 1232
XbaI	TCTAGA	1 cut(s)	494
XceI	RCATGY	1 cut(s)	805
XmnI	GAANNNNTTC	1 cut(s)	1692
XspI	CTAG	6 cut(s)	495, 1124, 1397, 1746, 1761, 2091
Zsp2I	ATGCAT	1 cut(s)	2035

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.