Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004897

Physical Location & Seq

Genomic Coordinates Reverse (-)

17083795 .. 17088105

Gene Structure 4311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00297110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGAATCAGAAGGGGACTAAGTTTGTAAGGTTTGATGATTGGCAATCAGAGAGATCTTCAAGTTCTGAGAGGGAATTTTCAACTGATGATGGACGAAATCCAAGAAGAGCTAGACCATCTGTGAATGCAGTATTGAGTAGTATTAGGAGAGGATTCGATAGGGGTTCAGATAGGTTTAAAAGCTTCAAAAAACCATTAAGTCCCACTTCTGTAGGTAAGCAGCCAGCAAAGGAGTCAGGCCCTCGGAAGAACATTCTCGACCCTCAGGGATCATTTCTTCAGAGTTGGAATAAGATATTTGTGATATCTTGTGTCATAGCTGTGTCATTGGACCCATTGTTTCTTTATACTTCTGTGGTTGATGGCAAAAAAAAATGCCTTGGTTTGGACAGAAGGCTGCAGATCATTGCTTGCGTTCTTCGTTCATTCACCGATGTTTTCCATATACTTCATATTATTTTTCAGTTCCGCACTGGGTTTATTGCCCCATCTTCTAGAGTATTCGGAAGGGGTGAGCTAAATGATGACCCTGTGGCCATTGCAAAAAGATACTTGTATTCATATTTCATCATAGATGTTCTAGCTATTCTTCCTCTGCCACAGGCTGTAGTTTTTGTCGTAGTCCCTAAAATAGAACGTCCAGTTCCAATGGCCGCAAAGAACTTATTGACGATTGTGATTGTTTGCCAATATGTGCCAAGACTTATACGAATCTATCCGCTATACAAAGAAGTTGAAAAAACTTCTGGCTTCCTGACTGAAACAGCGTGGGCTGCAGCTGCATTCAATCTTTTGCTCTACATGTTAGCCAGCCATGTAGTTGGAGCATTATGGTACTTGTTCTCTGTAGAACGAGAGTATAGGTGCTGGCGTGATTATTGTGGAAAAGATGTAGATTGTAAGAAATACCTGTACTGTGGCGGCCCTGACAAGGAAGCTGACATGAAAATTGTTGGCAATTTGACAAGAAGTTGCCCTTTTACCAACCCTGATGACGTTACAAATTCATCTGTGTTCAACTTTGGAATATTTGCCGAAGCTCTGGAGTCTGGAGTGACGGAGACAAAAGATTTTCCAATGAAATTTTCATACTGCTTCTGGTGGGGTCTGCGCAGCCTTAGTTCTCTAGGTCAAAACCTCAAAACAAGCACTTTTGTCTGGGAGATACTCTTTGCAGTCTTCATTTCTATCTTCGGACTGGTGCTATTTTCATTGCTCATTGGAAATATGCAGAAATTTCTGCAGTCAACAACTCAGAGAGTTGAAGAAATGAGAGTGAAAAGGCGAGATGCAGAACAGTGGATGTCCCACCGAATGCTCCCGGAGAAACTGAAGGAAAGGATCAGACGCTATGATCAGTATAAATGGCAAGAAACAAGAGGTGTTGAGGAAGATACTCTAGTTCGTAACCTTCCTAAAGACTTGAGGAAGGACATAAAACGCCACCTTTGCTTGGCTCTTGTTAAGAGAGTGCCAATGTTCGCGAAAATGGATGACCGACTGATGGATGCCCTGTGTGATCATCTCAAGCCAGTTCTTTTCACAGACAACAGCTTCATCATCCGAGAGGGTGACCCAGTCGATGAGATGCTATTTGTTATGCGTGGAAACTTGGCAACTATGACTACTAATGGTGGAAGAACTGGCTTCTTTAACTGTGCTGATCTTAAGGCCGGTGACTTCTGTGGAGAAGAGCTTCTTACATGGGCATTGGATCCAAAATCCACTTCCAATCTTCCTAGCTCAACTAGAACAGTGGAAGCTAGAACTGAGGTTGAAGCATTTGCTCTCAGGGCTGATGATTTGAAGTTTGTCGCCTCCCAGTTTCGGCGCCTGCACAGCAGGCAGGTCCAACATACTTTCAGGCAAGGCTCTAAACCATGGTTTTACTCCATGCAGTGGAGGACATGGGCGGCCTGTTTCATACAAGCAGCTTGGCGCCGGCACTGCAAGAGAAAGCTTGAGAAGTCATTACGTGAAGCAGAAGACAAGCTGCATGATGCTTTTGCAAGAGATGCCGGAACCTCACCAGGCCTTGTTGCCACTGTATATGCATCAAGGTTTGCAACCAATGCACTACGCGCCTTGCGACAGAAGGGTGTGCGTGACACTAGACCTTTACCAGCATTGATGCCACTGCTACCTCAGAAGCCCACTGAGCCTGATTTTACTGCAGAACATCAGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

729

Amino Acids

83.75

Weight (kDa)

9.45

Isoelectric Point (pI)

43.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	100 - 420	9.7e-18	Ion transport protein
cNMP_binding	PF00027	514 - 605	5.2e-07	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01340 AT1G01340 AT2G46430 AT2G46430 AT4G01010 AT4G01010
fragaria_vesca	FvH4_7g16300 FvH4_7g16300
malus_domestica	MD01G1079600.v1.1 MD07G1148400.v1.1
prunus_persica	Prupe.2G186700_v2.0.a1 Prupe.2G186700_v2.0.a1 Prupe.2G186700_v2.0.a1 Prupe.2G186900_v2.0.a1 Prupe.2G186900_v2.0.a1 Prupe.2G186900_v2.0.a1
pyrus_communis	pycom01g10790 pycom07g14740
rosa_chinensis	RchiOBHm_Chr1g0359311
rosa_laevigata	RLG00000027881
rosa_multiflora	Rmu_sc0005090.1_g000001 Rmu_sc0017222.1_g000004
rosa_roxburghii	Rroxscaffold_4G00297110
rosa_rugosa	Rorug01G0269500 Rorug01G0269600
rosa_samantha	Rh1AG283400 Rh1BG249600 Rh1CG267500 Rh1DG278500
rosa_wichuraiana	Rw1G025160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1112
Acc36I	ACCTGC	1 cut(s)	1837
AccB1I	GGYRCC	2 cut(s)	1830, 1938
AccB7I	CCANNNNNTGG	1 cut(s)	1899
AccII	CGCG	2 cut(s)	1484, 2082
AciI	CCGC	5 cut(s)	469, 654, 719, 921, 1913
AclWI	GGATC	4 cut(s)	277, 1349, 1709, 1722
AcoI	YGGCCR	2 cut(s)	534, 651
AcsI	RAATTY	4 cut(s)	74, 1003, 1082, 1235
AcuI	CTGAAG	2 cut(s)	263, 1352
AcyI	GRCGYC	2 cut(s)	1831, 1939
AfaI	GTAC	2 cut(s)	836, 914
AfiI	CCNNNNNNNGG	6 cut(s)	385, 931, 1453, 1504, 1827, 1899
AflII	CTTAAG	1 cut(s)	1667
AflIII	ACRYGT	1 cut(s)	801
AgsI	TTSAA	9 cut(s)	60, 81, 187, 737, 787, 1018, 1265, 1778, 1807
AjnI	CCWGG	1 cut(s)	2029
AjuI	GAANNNNNNNTTGG	4 cut(s)	1069, 1101, 1711, 1743
Alw26I	GTCTC	1 cut(s)	1055
AlwI	GGATC	4 cut(s)	277, 1349, 1709, 1722
AoxI	GGCC	7 cut(s)	238, 534, 651, 922, 1671, 1914, 2032
ApeKI	GCWGC	8 cut(s)	220, 397, 773, 776, 779, 1113, 1931, 1993
ApoI	RAATTY	4 cut(s)	74, 1003, 1082, 1235
Asp700I	GAANNNNTTC	1 cut(s)	1695
AspLEI	GCGC	4 cut(s)	1113, 1833, 1941, 2084
AspS9I	GGNCC	4 cut(s)	239, 331, 923, 1849
AsuC2I	CCSGG	1 cut(s)	1322
AsuHPI	GGTGA	5 cut(s)	421, 524, 1583, 1688, 2019
AvaII	GGWCC	2 cut(s)	331, 1849
AxyI	CCTNAGG	1 cut(s)	264
BaeI	ACNNNNGTAYC	2 cut(s)	1386, 1419
BalI	TGGCCA	1 cut(s)	536
BamHI	GGATCC	1 cut(s)	1714
BanI	GGYRCC	2 cut(s)	1830, 1938
BbsI	GAAGAC	2 cut(s)	1171, 1992
BbvI	GCAGC	8 cut(s)	232, 384, 760, 766, 788, 1125, 1943, 1980
BccI	CCATC	5 cut(s)	83, 124, 356, 496, 1498
BciT130I	CCWGG	1 cut(s)	2031
BclI	TGATCA	2 cut(s)	1354, 1519
BcnI	CCSGG	1 cut(s)	1322
BcoDI	GTCTC	1 cut(s)	1055
BfaI	CTAG	9 cut(s)	111, 495, 581, 1127, 1400, 1740, 1749, 1764, 2112
BfmI	CTRYAG	7 cut(s)	210, 398, 606, 774, 846, 1241, 2172
BfoI	RGCGCY	2 cut(s)	1834, 1942
BfrI	CTTAAG	1 cut(s)	1667
BfuAI	ACCTGC	1 cut(s)	1837
BglII	AGATCT	1 cut(s)	53
Bme1390I	CCNGG	2 cut(s)	1322, 2031
Bme18I	GGWCC	2 cut(s)	331, 1849
BmgT120I	GGNCC	4 cut(s)	239, 331, 923, 1849
BmiI	GGNNCC	5 cut(s)	333, 1716, 1832, 1940, 2023
BmrFI	CCNGG	2 cut(s)	1322, 2031
BmrI	ACTGGG	3 cut(s)	483, 1571, 1816
BmsI	GCATC	7 cut(s)	1279, 1498, 1578, 1990, 2005, 2063, 2121
BmuI	ACTGGG	3 cut(s)	483, 1571, 1816
BpiI	GAAGAC	2 cut(s)	1171, 1992
BpmI	CTGGAG	2 cut(s)	1064, 1071
BpuEI	CTTGAG	3 cut(s)	1444, 1511, 1982
BpuMI	CCSGG	1 cut(s)	1322
BsaAI	YACGTR	1 cut(s)	1976
BsaHI	GRCGYC	2 cut(s)	1831, 1939
BsaJI	CCNNGG	3 cut(s)	242, 379, 1880
Bsc4I	CCNNNNNNNGG	6 cut(s)	385, 931, 1453, 1504, 1827, 1899
Bse118I	RCCGGY	2 cut(s)	1673, 1941
Bse1I	ACTGG	7 cut(s)	478, 641, 1203, 1532, 1577, 1648, 1822
Bse21I	CCTNAGG	1 cut(s)	264
Bse3DI	GCAATG	3 cut(s)	405, 537, 1211
BseBI	CCWGG	1 cut(s)	2031
BseDI	CCNNGG	3 cut(s)	242, 379, 1880
BseGI	GGATG	4 cut(s)	1308, 1498, 1513, 1560
BseLI	CCNNNNNNNGG	6 cut(s)	385, 931, 1453, 1504, 1827, 1899
BseMI	GCAATG	3 cut(s)	405, 537, 1211
BseMII	CTCAG	7 cut(s)	57, 278, 1268, 1761, 1804, 2148, 2159
BseNI	ACTGG	7 cut(s)	478, 641, 1203, 1532, 1577, 1648, 1822
BseXI	GCAGC	8 cut(s)	232, 384, 760, 766, 788, 1125, 1943, 1980
BsgI	GTGCAG	1 cut(s)	1820
Bsh1236I	CGCG	2 cut(s)	1484, 2082
BshFI	GGCC	7 cut(s)	240, 536, 653, 924, 1673, 1916, 2034
BshNI	GGYRCC	2 cut(s)	1830, 1938
BsiSI	CCGG	4 cut(s)	1322, 1674, 1942, 2019
BslFI	GGGAC	4 cut(s)	28, 186, 608, 1291
BslI	CCNNNNNNNGG	6 cut(s)	385, 931, 1453, 1504, 1827, 1899
BsmAI	GTCTC	1 cut(s)	1055
BsmFI	GGGAC	4 cut(s)	28, 186, 608, 1291
BsmI	GAATGC	3 cut(s)	130, 782, 1320
BsnI	GGCC	7 cut(s)	240, 536, 653, 924, 1673, 1916, 2034
Bsp143I	GATC	8 cut(s)	53, 269, 402, 1341, 1354, 1519, 1663, 1714
Bsp19I	CCATGG	1 cut(s)	1880
Bsp68I	TCGCGA	1 cut(s)	1484
BspACI	CCGC	5 cut(s)	469, 654, 719, 921, 1913
BspANI	GGCC	7 cut(s)	240, 536, 653, 924, 1673, 1916, 2034
BspCNI	CTCAG	7 cut(s)	58, 277, 1267, 1762, 1803, 2149, 2158
BspFNI	CGCG	2 cut(s)	1484, 2082
BspLI	GGNNCC	5 cut(s)	333, 1716, 1832, 1940, 2023
BspMAI	CTGCAG	4 cut(s)	402, 778, 1245, 2176
BspMI	ACCTGC	1 cut(s)	1837
BspPI	GGATC	4 cut(s)	277, 1349, 1709, 1722
BspQI	GCTCTTC	2 cut(s)	100, 1686
BspT107I	GGYRCC	2 cut(s)	1830, 1938
BspTI	CTTAAG	1 cut(s)	1667
BsrDI	GCAATG	3 cut(s)	405, 537, 1211
BsrFI	RCCGGY	2 cut(s)	1673, 1941
BsrI	ACTGG	7 cut(s)	478, 641, 1203, 1532, 1577, 1648, 1822
BssAI	RCCGGY	2 cut(s)	1673, 1941
BssECI	CCNNGG	3 cut(s)	242, 379, 1880
BssMI	GATC	8 cut(s)	53, 269, 402, 1341, 1354, 1519, 1663, 1714
BssNI	GRCGYC	2 cut(s)	1831, 1939
BssT1I	CCWWGG	2 cut(s)	379, 1880
Bst2UI	CCWGG	1 cut(s)	2031
Bst4CI	ACNGT	5 cut(s)	917, 1299, 1658, 1756, 2047
Bst6I	CTCTTC	2 cut(s)	100, 1686
BstACI	GRCGYC	2 cut(s)	1831, 1939
BstAFI	CTTAAG	1 cut(s)	1667
BstAPI	GCANNNNNTGC	2 cut(s)	2015, 2072
BstBAI	YACGTR	1 cut(s)	1976
BstC8I	GCNNGC	7 cut(s)	225, 412, 811, 869, 1835, 1844, 1943
BstDEI	CTNAG	9 cut(s)	18, 66, 264, 1118, 1254, 1770, 1790, 2145, 2157
BstDSI	CCRYGG	1 cut(s)	1880
BstEII	GGTNACC	1 cut(s)	1571
BstF5I	GGATG	4 cut(s)	1308, 1498, 1513, 1560
BstFNI	CGCG	2 cut(s)	1484, 2082
BstH2I	RGCGCY	2 cut(s)	1834, 1942
BstHHI	GCGC	4 cut(s)	1113, 1833, 1941, 2084
BstKTI	GATC	8 cut(s)	56, 272, 405, 1344, 1357, 1522, 1666, 1717
BstMAI	GTCTC	1 cut(s)	1055
BstMBI	GATC	8 cut(s)	53, 269, 402, 1341, 1354, 1519, 1663, 1714
BstNI	CCWGG	1 cut(s)	2031
BstNSI	RCATGY	1 cut(s)	805
BstPI	GGTNACC	1 cut(s)	1571
BstSCI	CCNGG	2 cut(s)	1320, 2029
BstSFI	CTRYAG	7 cut(s)	210, 398, 606, 774, 846, 1241, 2172
BstUI	CGCG	2 cut(s)	1484, 2082
BstV1I	GCAGC	8 cut(s)	232, 384, 760, 766, 788, 1125, 1943, 1980
BstV2I	GAAGAC	2 cut(s)	1171, 1992
BstX2I	RGATCY	2 cut(s)	53, 1714
BstXI	CCANNNNNNTGG	1 cut(s)	821
BstYI	RGATCY	2 cut(s)	53, 1714
Bsu36I	CCTNAGG	1 cut(s)	264
BsuRI	GGCC	7 cut(s)	240, 536, 653, 924, 1673, 1916, 2034
BtgI	CCRYGG	1 cut(s)	1880
BtsCI	GGATG	4 cut(s)	1308, 1498, 1513, 1560
BtsI	GCAGTG	3 cut(s)	1904, 1945, 2135
BtsIMutI	CAGTG	8 cut(s)	471, 1304, 1761, 1904, 1945, 2043, 2135, 2154
BtuMI	TCGCGA	1 cut(s)	1484
BveI	ACCTGC	1 cut(s)	1837
Cac8I	GCNNGC	7 cut(s)	225, 412, 811, 869, 1835, 1844, 1943
CfoI	GCGC	4 cut(s)	1113, 1833, 1941, 2084
Cfr10I	RCCGGY	2 cut(s)	1673, 1941
Cfr13I	GGNCC	4 cut(s)	239, 331, 923, 1849
CseI	GACGC	1 cut(s)	1356
Csp6I	GTAC	2 cut(s)	835, 913
CviAII	CATG	8 cut(s)	802, 815, 943, 1704, 1881, 1894, 1908, 1997
CviQI	GTAC	2 cut(s)	835, 913
DdeI	CTNAG	9 cut(s)	18, 66, 264, 1118, 1254, 1770, 1790, 2145, 2157
DinI	GGCGCC	2 cut(s)	1832, 1940
DpnI	GATC	8 cut(s)	55, 271, 404, 1343, 1356, 1521, 1665, 1716
DpnII	GATC	8 cut(s)	53, 269, 402, 1341, 1354, 1519, 1663, 1714
DraI	TTTAAA	1 cut(s)	178
EaeI	YGGCCR	2 cut(s)	534, 651
Eam1104I	CTCTTC	2 cut(s)	100, 1686
EarI	CTCTTC	2 cut(s)	100, 1686
Eco130I	CCWWGG	2 cut(s)	379, 1880
Eco147I	AGGCCT	1 cut(s)	2034
Eco32I	GATATC	1 cut(s)	306
Eco47I	GGWCC	2 cut(s)	331, 1849
Eco57I	CTGAAG	2 cut(s)	263, 1352
Eco81I	CCTNAGG	1 cut(s)	264
Eco91I	GGTNACC	1 cut(s)	1571
EcoO109I	RGGNCCY	1 cut(s)	239
EcoO65I	GGTNACC	1 cut(s)	1571
EcoRII	CCWGG	1 cut(s)	2029
EcoRV	GATATC	1 cut(s)	306
EcoT14I	CCWWGG	2 cut(s)	379, 1880
EcoT22I	ATGCAT	1 cut(s)	2056
EgeI	GGCGCC	2 cut(s)	1832, 1940
EheI	GGCGCC	2 cut(s)	1832, 1940
ErhI	CCWWGG	2 cut(s)	379, 1880
FaeI	CATG	8 cut(s)	805, 818, 946, 1707, 1884, 1897, 1911, 2000
FalI	AAGNNNNNCTT	6 cut(s)	190, 222, 961, 993, 1683, 1715
FaqI	GGGAC	4 cut(s)	28, 186, 608, 1291
FatI	CATG	8 cut(s)	801, 814, 942, 1703, 1880, 1893, 1907, 1996
FbaI	TGATCA	2 cut(s)	1354, 1519
FokI	GGATG	4 cut(s)	1315, 1505, 1520, 1547
FspBI	CTAG	9 cut(s)	111, 495, 581, 1127, 1400, 1740, 1749, 1764, 2112
FspI	TGCGCA	1 cut(s)	1112
GlaI	GCGC	4 cut(s)	1112, 1832, 1940, 2083
GsuI	CTGGAG	2 cut(s)	1064, 1071
HaeII	RGCGCY	2 cut(s)	1834, 1942
HaeIII	GGCC	7 cut(s)	240, 536, 653, 924, 1673, 1916, 2034
HapII	CCGG	4 cut(s)	1322, 1674, 1942, 2019
HgaI	GACGC	1 cut(s)	1356
HhaI	GCGC	4 cut(s)	1113, 1833, 1941, 2084
Hin1I	GRCGYC	2 cut(s)	1831, 1939
Hin1II	CATG	8 cut(s)	805, 818, 946, 1707, 1884, 1897, 1911, 2000
Hin6I	GCGC	4 cut(s)	1111, 1831, 1939, 2082
HinP1I	GCGC	4 cut(s)	1111, 1831, 1939, 2082
HincII	GTYRAC	1 cut(s)	1248
HindII	GTYRAC	1 cut(s)	1248
HindIII	AAGCTT	2 cut(s)	181, 1958
HinfI	GANTC	5 cut(s)	4, 153, 233, 711, 1046
HpaII	CCGG	4 cut(s)	1322, 1674, 1942, 2019
HphI	GGTGA	5 cut(s)	421, 524, 1583, 1688, 2019
Hpy166II	GTNNAC	1 cut(s)	1248
Hpy188III	TCNNGA	7 cut(s)	257, 495, 754, 1043, 1050, 1483, 2183
Hpy8I	GTNNAC	1 cut(s)	1248
HpyAV	CCTTC	7 cut(s)	4, 387, 501, 1327, 1421, 1423, 2089
HpyCH4III	ACNGT	5 cut(s)	917, 1299, 1658, 1756, 2047
HpyCH4IV	ACGT	3 cut(s)	637, 996, 1975
HpyF3I	CTNAG	9 cut(s)	18, 66, 264, 1118, 1254, 1770, 1790, 2145, 2157
HpySE526I	ACGT	3 cut(s)	637, 996, 1975
Hsp92I	GRCGYC	2 cut(s)	1831, 1939
Hsp92II	CATG	8 cut(s)	805, 818, 946, 1707, 1884, 1897, 1911, 2000
HspAI	GCGC	4 cut(s)	1111, 1831, 1939, 2082
KasI	GGCGCC	2 cut(s)	1830, 1938
KroI	GCCGGC	1 cut(s)	1941
KroNI	GCCGGC	1 cut(s)	1943
Ksp22I	TGATCA	2 cut(s)	1354, 1519
Kzo9I	GATC	8 cut(s)	53, 269, 402, 1341, 1354, 1519, 1663, 1714
LguI	GCTCTTC	2 cut(s)	100, 1686
LmnI	GCTCC	2 cut(s)	824, 1323
Lsp1109I	GCAGC	8 cut(s)	232, 384, 760, 766, 788, 1125, 1943, 1980
LweI	GCATC	7 cut(s)	1279, 1498, 1578, 1990, 2005, 2063, 2121
MaeI	CTAG	9 cut(s)	111, 495, 581, 1127, 1400, 1740, 1749, 1764, 2112
MaeII	ACGT	3 cut(s)	637, 996, 1975
MaeIII	GTNAC	6 cut(s)	997, 1054, 1406, 1571, 1676, 2105
MalI	GATC	8 cut(s)	55, 271, 404, 1343, 1356, 1521, 1665, 1716
MboI	GATC	8 cut(s)	53, 269, 402, 1341, 1354, 1519, 1663, 1714
MflI	RGATCY	2 cut(s)	53, 1714
MlsI	TGGCCA	1 cut(s)	536
MluCI	AATT	6 cut(s)	74, 948, 958, 1003, 1082, 1235
MluNI	TGGCCA	1 cut(s)	536
Mly113I	GGCGCC	2 cut(s)	1831, 1939
MlyI	GAGTC	2 cut(s)	242, 1055
MmeI	TCCRAC	3 cut(s)	266, 802, 1876
Mox20I	TGGCCA	1 cut(s)	536
Mph1103I	ATGCAT	1 cut(s)	2056
MroNI	GCCGGC	1 cut(s)	1941
MroXI	GAANNNNTTC	1 cut(s)	1695
MscI	TGGCCA	1 cut(s)	536
MseI	TTAA	5 cut(s)	177, 197, 1464, 1653, 1668
MslI	CAYNNNNRTG	1 cut(s)	320
Msp20I	TGGCCA	1 cut(s)	536
MspA1I	CMGCKG	1 cut(s)	779
MspCI	CTTAAG	1 cut(s)	1667
MspI	CCGG	4 cut(s)	1322, 1674, 1942, 2019
MspR9I	CCNGG	2 cut(s)	1322, 2031
Mva1269I	GAATGC	3 cut(s)	130, 782, 1320
MvaI	CCWGG	1 cut(s)	2031
MvnI	CGCG	2 cut(s)	1484, 2082
NaeI	GCCGGC	1 cut(s)	1943
NarI	GGCGCC	2 cut(s)	1831, 1939
NciI	CCSGG	1 cut(s)	1322
NcoI	CCATGG	1 cut(s)	1880
NdeII	GATC	8 cut(s)	53, 269, 402, 1341, 1354, 1519, 1663, 1714
NgoMIV	GCCGGC	1 cut(s)	1941
NlaIII	CATG	8 cut(s)	805, 818, 946, 1707, 1884, 1897, 1911, 2000
NlaIV	GGNNCC	5 cut(s)	333, 1716, 1832, 1940, 2023
NmuCI	GTSAC	4 cut(s)	1054, 1571, 1676, 2105
NruI	TCGCGA	1 cut(s)	1484
NsbI	TGCGCA	1 cut(s)	1112
NsiI	ATGCAT	1 cut(s)	2056
NspI	RCATGY	1 cut(s)	805
PceI	AGGCCT	1 cut(s)	2034
PciI	ACATGT	1 cut(s)	801
PciSI	GCTCTTC	2 cut(s)	100, 1686
PcsI	WCGNNNNNNNCGW	1 cut(s)	2086
PctI	GAATGC	3 cut(s)	130, 782, 1320
PdiI	GCCGGC	1 cut(s)	1943
PdmI	GAANNNNTTC	1 cut(s)	1695
PfeI	GAWTC	3 cut(s)	4, 153, 711
PflFI	GACNNNGTC	1 cut(s)	1577
PflMI	CCANNNNNTGG	1 cut(s)	1899
PfoI	TCCNGGA	1 cut(s)	1320
PleI	GAGTC	2 cut(s)	241, 1054
PluTI	GGCGCC	2 cut(s)	1834, 1942
PpsI	GAGTC	2 cut(s)	241, 1054
Ppu21I	YACGTR	1 cut(s)	1976
PscI	ACATGT	1 cut(s)	801
Psp6I	CCWGG	1 cut(s)	2029
PspEI	GGTNACC	1 cut(s)	1571
PspGI	CCWGG	1 cut(s)	2029
PspN4I	GGNNCC	5 cut(s)	333, 1716, 1832, 1940, 2023
PspPI	GGNCC	4 cut(s)	239, 331, 923, 1849
PstI	CTGCAG	4 cut(s)	402, 778, 1245, 2176
PsuI	RGATCY	2 cut(s)	53, 1714
PsyI	GACNNNGTC	1 cut(s)	1577
PvuII	CAGCTG	1 cut(s)	779
RruI	TCGCGA	1 cut(s)	1484
RsaI	GTAC	2 cut(s)	836, 914
RsaNI	GTAC	2 cut(s)	835, 913
RseI	CAYNNNNRTG	1 cut(s)	320
SapI	GCTCTTC	2 cut(s)	100, 1686
SaqAI	TTAA	5 cut(s)	177, 197, 1464, 1653, 1668
Sau3AI	GATC	8 cut(s)	53, 269, 402, 1341, 1354, 1519, 1663, 1714
Sau96I	GGNCC	4 cut(s)	239, 331, 923, 1849
SchI	GAGTC	2 cut(s)	242, 1055
ScrFI	CCNGG	2 cut(s)	1322, 2031
SfaNI	GCATC	7 cut(s)	1279, 1498, 1578, 1990, 2005, 2063, 2121
SfcI	CTRYAG	7 cut(s)	210, 398, 606, 774, 846, 1241, 2172
SfoI	GGCGCC	2 cut(s)	1832, 1940
SinI	GGWCC	2 cut(s)	331, 1849
SmiMI	CAYNNNNRTG	1 cut(s)	320
SmlI	CTYRAG	4 cut(s)	1423, 1526, 1667, 1961
SmoI	CTYRAG	4 cut(s)	1423, 1526, 1667, 1961
Sse9I	AATT	6 cut(s)	74, 948, 958, 1003, 1082, 1235
SseBI	AGGCCT	1 cut(s)	2034
SsiI	CCGC	5 cut(s)	469, 654, 719, 921, 1913
SspDI	GGCGCC	2 cut(s)	1830, 1938
SspI	AATATT	1 cut(s)	1029
SspMI	CTAG	9 cut(s)	111, 495, 581, 1127, 1400, 1740, 1749, 1764, 2112
StuI	AGGCCT	1 cut(s)	2034
StyD4I	CCNGG	2 cut(s)	1320, 2029
StyI	CCWWGG	2 cut(s)	379, 1880
TaaI	ACNGT	5 cut(s)	917, 1299, 1658, 1756, 2047
TaiI	ACGT	3 cut(s)	640, 999, 1978
TaqI	TCGA	3 cut(s)	156, 258, 1581
TaqII	GACCGA	1 cut(s)	1512
TasI	AATT	6 cut(s)	74, 948, 958, 1003, 1082, 1235
TatI	WGTACW	1 cut(s)	912
TauI	GCSGC	3 cut(s)	656, 924, 1916
TfiI	GAWTC	3 cut(s)	4, 153, 711
Tru1I	TTAA	5 cut(s)	177, 197, 1464, 1653, 1668
Tru9I	TTAA	5 cut(s)	177, 197, 1464, 1653, 1668
TscAI	CASTG	8 cut(s)	478, 1304, 1761, 1904, 1952, 2050, 2142, 2161
TseFI	GTSAC	4 cut(s)	1054, 1571, 1676, 2105
TseI	GCWGC	8 cut(s)	220, 397, 773, 776, 779, 1113, 1931, 1993
Tsp45I	GTSAC	4 cut(s)	1054, 1571, 1676, 2105
TspGWI	ACGGA	1 cut(s)	1073
TspRI	CASTG	8 cut(s)	478, 1304, 1761, 1904, 1952, 2050, 2142, 2161
Tth111I	GACNNNGTC	1 cut(s)	1577
Van91I	CCANNNNNTGG	1 cut(s)	1899
Vha464I	CTTAAG	1 cut(s)	1667
VpaK11BI	GGWCC	2 cut(s)	331, 1849
XapI	RAATTY	4 cut(s)	74, 1003, 1082, 1235
XbaI	TCTAGA	1 cut(s)	494
XceI	RCATGY	1 cut(s)	805
XmnI	GAANNNNTTC	1 cut(s)	1695
XspI	CTAG	9 cut(s)	111, 495, 581, 1127, 1400, 1740, 1749, 1764, 2112
Zsp2I	ATGCAT	1 cut(s)	2056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.