Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003212

Physical Location & Seq

Genomic Coordinates Reverse (-)

6998020 .. 7000681

Gene Structure 2662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031644

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGGAGTCGCGAGTGCTGTCACGCGCCACCGCCTTCGCGTCGGTCCCGAGCCTCCGCAAGTCGTCCCGGCGCCAGCCCGGCGCCTTTTCCTTCGTCTCGGCTCGCCGGCCGATAGGGACCGTCAGCGAGGGCGGGAACTTGATCTGGGGGAGGCAGCTCCGTCCGTCGCTGCTGCTCGAAGCTTCCCCGCCGTCGTCGAGGAAGGAGATTCTCAAACCCTGCCTCGCCGCCGCGGCCGAGGGAGGCGATTCCGCCGGAGAAGCTAAGGTCGCTCCGGTCGGGTTCATCGAGAAGTACCCGGCTCTGGTCACCGGCTTCTTCTTCTTCATGTGGTACTTTCTGAACGTGATTTTCAACATTCTAAACAAGAAGATCTACAATTACTTCCCGTATCCATACTTCGTGTCGGTGATACACTTGGGAGTTGGGGTGATTTACTGTCTGATCAGCTGGGCCGTGGGCCTCCCTAAGCGGGCTCCTATGGACTCGAACCAATTGAAGTTGCTCATCCCTGTTGCGGTGTGTCACGCACTTGGTCACGTCACCAGCAATGTCTCATTTGCGGCCGTTGCCGTCTCATTCACACACACCATCAAAGCTCTTGAGCCATTTTTCAATGCCTCTGCTTCTCAATTCGTGCTTGGACAGTCAATCCCCTTGTCCTTGTGGTTGTCTCTGCTTCCTGTCGTTGTTGGTGTGTCAATGGCATCACTCACTGAGTTGTCGTTCAACTGGCTTGGCTTCATTAGTGCTATGATTTCAAATATCTCCTTCACTTACAGGAGTATCTATTCGAAGAAAGCCATGACTGATATGGATAGCACCAATTTGTATGCCTACATTTCAATCATCGCACTCTTTGTCTGCATTCCACCTGCTCTCATTGTGGAGGGACCTCAACTGCTTAAGCACGGTTTTGCTGATGCAATTGCTAAAGTAGGCCTTGTCAAGTTTGTTACTGACCTCTTCTGGGTGGGGTTGTTTTACCATCTCTACAATCAGCTGGCCACCAACACCCTTGAGAGAGTGGCTCCTCTTACACACGCAGTTGGAAATGTGTTGAAACGTGTGTTTGTGATTGGCTTCTCAATTGTGGTCTTTGGTAACAAGATTTCAACACAAACTGGTATTGGAACGGTCATTGCAATTGCTGGAGTTGCTATCTACTCGTACCTCAAGGCCAAGATAGAGGAAGAGAAACGGCAAGCGAAAGCTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005342 GO:0006810 GO:0006811 GO:0006820 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0008643 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009643 GO:0015075 GO:0015120 GO:0015144 GO:0015318 GO:0015605 GO:0015711 GO:0015713 GO:0015717 GO:0015718 GO:0015748 GO:0015849 GO:0022857 GO:0034219 GO:0034220 GO:0035436 GO:0042873 GO:0042879 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071917 GO:0098656 GO:1901264 GO:1901505 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPT

Protein Analysis

407

Amino Acids

44.3

Weight (kDa)

9.68

Isoelectric Point (pI)

41.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPT	PF03151	103 - 390	8.1e-110	Triose-phosphate Transporter family
EamA	PF00892	246 - 390	3.8e-08	EamA-like transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46110 AT5G46110 AT5G46110 AT5G46110
fragaria_vesca	FvH4_3g08560 FvH4_3g08560 FvH4_4g30170
malus_domestica	MD05G1310100.v1.1 MD10G1289000.v1.1 MD16G1061900.v1.1
prunus_persica	Prupe.1G286000_v2.0.a1 Prupe.4G052700_v2.0.a1 Prupe.4G052700_v2.0.a1 Prupe.4G052700_v2.0.a1
pyrus_communis	pycom05g28650 pycom10g24160 pycom13g05580 pycom16g05410
rosa_chinensis	RchiOBHm_Chr4g0438501 RchiOBHm_Chr5g0009281
rosa_laevigata	RLG00000006358 RLG00000031644
rosa_multiflora	Rmu_co8445077.1_g000001 Rmu_sc0002327.1_g000018 Rmu_sc0006233.1_g000012
rosa_roxburghii	Rroxscaffold_1G00066810 Rroxscaffold_1G00067510 Rroxscaffold_5G00379510
rosa_rugosa	Rorug04G0310400 Rorug04G0441700 Rorug04G0441700
rosa_samantha	Rh4AG361200 Rh5AG071900 Rh5DG068600
rosa_wichuraiana	Rw0G006600 Rw0G016550 Rw5G006720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	883
Acc36I	ACCTGC	1 cut(s)	883
AccB1I	GGYRCC	2 cut(s)	69, 80
AccII	CGCG	4 cut(s)	10, 24, 38, 233
AcoI	YGGCCR	4 cut(s)	107, 234, 564, 1005
AcyI	GRCGYC	2 cut(s)	70, 81
AfaI	GTAC	3 cut(s)	296, 335, 1172
AfiI	CCNNNNNNNGG	4 cut(s)	304, 472, 517, 970
AflII	CTTAAG	1 cut(s)	905
AflIII	ACRYGT	1 cut(s)	1066
AgsI	TTSAA	8 cut(s)	355, 499, 616, 730, 762, 846, 1063, 1116
AjiI	CACGTC	1 cut(s)	541
AluBI	AGCT	7 cut(s)	157, 182, 263, 450, 599, 1003, 1214
AluI	AGCT	7 cut(s)	157, 182, 263, 450, 599, 1003, 1214
Alw26I	GTCTC	4 cut(s)	100, 559, 580, 678
Ama87I	CYCGRG	1 cut(s)	46
AoxI	GGCC	8 cut(s)	107, 234, 453, 460, 564, 940, 1005, 1179
ApeKI	GCWGC	4 cut(s)	154, 169, 172, 1214
AspLEI	GCGC	3 cut(s)	26, 72, 83
AspS9I	GGNCC	5 cut(s)	43, 117, 453, 460, 893
AsuC2I	CCSGG	3 cut(s)	67, 78, 299
AsuHPI	GGTGA	4 cut(s)	301, 421, 442, 535
AsuII	TTCGAA	1 cut(s)	794
AvaI	CYCGRG	1 cut(s)	46
AvaII	GGWCC	3 cut(s)	43, 117, 893
BaeI	ACNNNNGTAYC	2 cut(s)	769, 802
BalI	TGGCCA	1 cut(s)	1007
BanI	GGYRCC	2 cut(s)	69, 80
BanII	GRGCYC	1 cut(s)	478
BarI	GAAGNNNNNNTAC	2 cut(s)	383, 415
BbvI	GCAGC	4 cut(s)	156, 159, 166, 1201
BccI	CCATC	2 cut(s)	599, 996
BceAI	ACGGC	5 cut(s)	175, 440, 551, 557, 1217
BciVI	GTATCC	1 cut(s)	402
BclI	TGATCA	1 cut(s)	444
BcnI	CCSGG	3 cut(s)	67, 78, 299
BcoDI	GTCTC	4 cut(s)	100, 559, 580, 678
BfoI	RGCGCY	2 cut(s)	73, 84
BfrI	CTTAAG	1 cut(s)	905
BfuAI	ACCTGC	1 cut(s)	883
BfuI	GTATCC	1 cut(s)	402
BglI	GCCNNNNNGGC	2 cut(s)	78, 233
BglII	AGATCT	1 cut(s)	372
BisI	GCNGC	8 cut(s)	155, 170, 173, 228, 231, 234, 564, 1215
BlsI	GCNGC	8 cut(s)	156, 171, 174, 229, 232, 235, 565, 1216
Bme1390I	CCNGG	3 cut(s)	67, 78, 299
Bme18I	GGWCC	3 cut(s)	43, 117, 893
BmeT110I	CYCGRG	1 cut(s)	46
BmgBI	CACGTC	1 cut(s)	541
BmgT120I	GGNCC	5 cut(s)	43, 117, 453, 460, 893
BmiI	GGNNCC	7 cut(s)	45, 71, 82, 118, 477, 894, 1032
BmrFI	CCNGG	3 cut(s)	67, 78, 299
BmsI	GCATC	2 cut(s)	716, 913
BplI	GAGNNNNNCTC	2 cut(s)	1015, 1047
BpmI	CTGGAG	1 cut(s)	1173
Bpu10I	CCTNAGC	2 cut(s)	264, 468
Bpu14I	TTCGAA	1 cut(s)	794
BpuEI	CTTGAG	3 cut(s)	623, 1040, 1160
BpuMI	CCSGG	3 cut(s)	67, 78, 299
BsaHI	GRCGYC	2 cut(s)	70, 81
BsaJI	CCNNGG	3 cut(s)	231, 237, 456
BsaWI	WCCGGW	1 cut(s)	274
BsaXI	ACNNNNNCTCC	2 cut(s)	414, 444
Bsc4I	CCNNNNNNNGG	4 cut(s)	304, 472, 517, 970
Bse118I	RCCGGY	2 cut(s)	105, 311
Bse1I	ACTGG	2 cut(s)	737, 1129
Bse3DI	GCAATG	2 cut(s)	556, 1140
BseDI	CCNNGG	3 cut(s)	231, 237, 456
BseGI	GGATG	1 cut(s)	507
BseLI	CCNNNNNNNGG	4 cut(s)	304, 472, 517, 970
BseMI	GCAATG	2 cut(s)	556, 1140
BseMII	CTCAG	1 cut(s)	708
BseNI	ACTGG	2 cut(s)	737, 1129
BseRI	GAGGAG	1 cut(s)	1023
BseX3I	CGGCCG	3 cut(s)	107, 234, 564
BseXI	GCAGC	4 cut(s)	156, 159, 166, 1201
BseYI	CCCAGC	1 cut(s)	450
Bsh1236I	CGCG	4 cut(s)	10, 24, 38, 233
Bsh1285I	CGRYCG	4 cut(s)	110, 237, 279, 567
BshFI	GGCC	8 cut(s)	109, 236, 455, 462, 566, 942, 1007, 1181
BshNI	GGYRCC	2 cut(s)	69, 80
BsiEI	CGRYCG	4 cut(s)	110, 237, 279, 567
BsiHKCI	CYCGRG	1 cut(s)	46
BsiSI	CCGG	7 cut(s)	67, 78, 106, 255, 275, 299, 312
BslFI	GGGAC	4 cut(s)	29, 49, 130, 906
BslI	CCNNNNNNNGG	4 cut(s)	304, 472, 517, 970
BsmAI	GTCTC	4 cut(s)	100, 559, 580, 678
BsmBI	CGTCTC	2 cut(s)	100, 580
BsmFI	GGGAC	4 cut(s)	29, 49, 130, 906
BsmI	GAATGC	1 cut(s)	867
BsnI	GGCC	8 cut(s)	109, 236, 455, 462, 566, 942, 1007, 1181
BsoBI	CYCGRG	1 cut(s)	46
Bsp119I	TTCGAA	1 cut(s)	794
Bsp1286I	GDGCHC	1 cut(s)	478
Bsp143I	GATC	3 cut(s)	141, 372, 444
Bsp68I	TCGCGA	1 cut(s)	10
BspANI	GGCC	8 cut(s)	109, 236, 455, 462, 566, 942, 1007, 1181
BspCNI	CTCAG	1 cut(s)	709
BspFNI	CGCG	4 cut(s)	10, 24, 38, 233
BspLI	GGNNCC	7 cut(s)	45, 71, 82, 118, 477, 894, 1032
BspMI	ACCTGC	1 cut(s)	883
BspT104I	TTCGAA	1 cut(s)	794
BspT107I	GGYRCC	2 cut(s)	69, 80
BspTI	CTTAAG	1 cut(s)	905
BsrDI	GCAATG	2 cut(s)	556, 1140
BsrFI	RCCGGY	2 cut(s)	105, 311
BsrI	ACTGG	2 cut(s)	737, 1129
BssAI	RCCGGY	2 cut(s)	105, 311
BssECI	CCNNGG	3 cut(s)	231, 237, 456
BssMI	GATC	3 cut(s)	141, 372, 444
BssNI	GRCGYC	2 cut(s)	70, 81
Bst4CI	ACNGT	5 cut(s)	121, 440, 648, 914, 1138
Bst6I	CTCTTC	2 cut(s)	971, 1188
BstACI	GRCGYC	2 cut(s)	70, 81
BstAFI	CTTAAG	1 cut(s)	905
BstBI	TTCGAA	1 cut(s)	794
BstC8I	GCNNGC	6 cut(s)	74, 103, 107, 474, 1005, 1206
BstDEI	CTNAG	3 cut(s)	264, 468, 717
BstDSI	CCRYGG	2 cut(s)	231, 456
BstEII	GGTNACC	1 cut(s)	307
BstF5I	GGATG	1 cut(s)	507
BstFNI	CGCG	4 cut(s)	10, 24, 38, 233
BstH2I	RGCGCY	2 cut(s)	73, 84
BstHHI	GCGC	3 cut(s)	26, 72, 83
BstKTI	GATC	3 cut(s)	144, 375, 447
BstMAI	GTCTC	4 cut(s)	100, 559, 580, 678
BstMBI	GATC	3 cut(s)	141, 372, 444
BstMCI	CGRYCG	4 cut(s)	110, 237, 279, 567
BstMWI	GCNNNNNNNGC	7 cut(s)	78, 233, 260, 269, 569, 1157, 1214
BstPI	GGTNACC	1 cut(s)	307
BstSCI	CCNGG	3 cut(s)	65, 76, 297
BstUI	CGCG	4 cut(s)	10, 24, 38, 233
BstV1I	GCAGC	4 cut(s)	156, 159, 166, 1201
BstX2I	RGATCY	1 cut(s)	372
BstYI	RGATCY	1 cut(s)	372
BstZI	CGGCCG	3 cut(s)	107, 234, 564
BsuI	GTATCC	1 cut(s)	402
BsuRI	GGCC	8 cut(s)	109, 236, 455, 462, 566, 942, 1007, 1181
BtgI	CCRYGG	2 cut(s)	231, 456
BtgZI	GCGATG	1 cut(s)	835
BtrI	CACGTC	1 cut(s)	541
BtsCI	GGATG	1 cut(s)	507
BtsIMutI	CAGTG	1 cut(s)	714
BtuMI	TCGCGA	1 cut(s)	10
BveI	ACCTGC	1 cut(s)	883
Cac8I	GCNNGC	6 cut(s)	74, 103, 107, 474, 1005, 1206
CfoI	GCGC	3 cut(s)	26, 72, 83
Cfr10I	RCCGGY	2 cut(s)	105, 311
Cfr13I	GGNCC	5 cut(s)	43, 117, 453, 460, 893
Cfr42I	CCGCGG	1 cut(s)	234
CseI	GACGC	1 cut(s)	27
Csp6I	GTAC	3 cut(s)	295, 334, 1171
CviAII	CATG	3 cut(s)	328, 805, 1218
CviQI	GTAC	3 cut(s)	295, 334, 1171
DdeI	CTNAG	3 cut(s)	264, 468, 717
DinI	GGCGCC	2 cut(s)	71, 82
DpnI	GATC	3 cut(s)	143, 374, 446
DpnII	GATC	3 cut(s)	141, 372, 444
EaeI	YGGCCR	4 cut(s)	107, 234, 564, 1005
EagI	CGGCCG	3 cut(s)	107, 234, 564
Eam1104I	CTCTTC	2 cut(s)	971, 1188
EarI	CTCTTC	2 cut(s)	971, 1188
EciI	GGCGGA	1 cut(s)	241
EclXI	CGGCCG	3 cut(s)	107, 234, 564
Eco147I	AGGCCT	1 cut(s)	942
Eco24I	GRGCYC	1 cut(s)	478
Eco47I	GGWCC	3 cut(s)	43, 117, 893
Eco52I	CGGCCG	3 cut(s)	107, 234, 564
Eco88I	CYCGRG	1 cut(s)	46
Eco91I	GGTNACC	1 cut(s)	307
EcoO109I	RGGNCCY	1 cut(s)	893
EcoO65I	GGTNACC	1 cut(s)	307
EcoT38I	GRGCYC	1 cut(s)	478
EgeI	GGCGCC	2 cut(s)	71, 82
EheI	GGCGCC	2 cut(s)	71, 82
Esp3I	CGTCTC	2 cut(s)	100, 580
FaeI	CATG	3 cut(s)	331, 808, 1221
FaiI	YATR	8 cut(s)	329, 397, 482, 755, 806, 815, 834, 1219
FalI	AAGNNNNNCTT	2 cut(s)	927, 959
FaqI	GGGAC	4 cut(s)	29, 49, 130, 906
FatI	CATG	3 cut(s)	327, 804, 1217
FauI	CCCGC	3 cut(s)	125, 195, 465
FbaI	TGATCA	1 cut(s)	444
Fnu4HI	GCNGC	8 cut(s)	155, 170, 173, 228, 231, 234, 564, 1215
FokI	GGATG	1 cut(s)	494
FriOI	GRGCYC	1 cut(s)	478
Fsp4HI	GCNGC	8 cut(s)	155, 170, 173, 228, 231, 234, 564, 1215
GlaI	GCGC	3 cut(s)	25, 71, 82
GluI	GCNGC	8 cut(s)	155, 170, 173, 228, 231, 234, 564, 1215
GsaI	CCCAGC	1 cut(s)	454
GsuI	CTGGAG	1 cut(s)	1173
HaeII	RGCGCY	2 cut(s)	73, 84
HaeIII	GGCC	8 cut(s)	109, 236, 455, 462, 566, 942, 1007, 1181
HapII	CCGG	7 cut(s)	67, 78, 106, 255, 275, 299, 312
HgaI	GACGC	1 cut(s)	27
HhaI	GCGC	3 cut(s)	26, 72, 83
Hin1I	GRCGYC	2 cut(s)	70, 81
Hin1II	CATG	3 cut(s)	331, 808, 1221
Hin6I	GCGC	3 cut(s)	24, 70, 81
HinP1I	GCGC	3 cut(s)	24, 70, 81
HindIII	AAGCTT	1 cut(s)	180
HinfI	GANTC	4 cut(s)	5, 208, 248, 485
HpaII	CCGG	7 cut(s)	67, 78, 106, 255, 275, 299, 312
HphI	GGTGA	4 cut(s)	301, 421, 442, 535
Hpy188I	TCNGA	2 cut(s)	342, 444
Hpy188III	TCNNGA	4 cut(s)	9, 46, 289, 602
Hpy99I	CGWCG	4 cut(s)	43, 169, 196, 199
HpyAV	CCTTC	4 cut(s)	43, 100, 196, 781
HpyCH4III	ACNGT	5 cut(s)	121, 440, 648, 914, 1138
HpyCH4IV	ACGT	3 cut(s)	345, 540, 1066
HpyCH4V	TGCA	4 cut(s)	867, 926, 1145, 1217
HpyF10VI	GCNNNNNNNGC	7 cut(s)	78, 233, 260, 269, 569, 1157, 1214
HpyF3I	CTNAG	3 cut(s)	264, 468, 717
HpySE526I	ACGT	3 cut(s)	345, 540, 1066
Hsp92I	GRCGYC	2 cut(s)	70, 81
Hsp92II	CATG	3 cut(s)	331, 808, 1221
HspAI	GCGC	3 cut(s)	24, 70, 81
KasI	GGCGCC	2 cut(s)	69, 80
KroI	GCCGGC	1 cut(s)	105
KroNI	GCCGGC	1 cut(s)	107
Ksp22I	TGATCA	1 cut(s)	444
KspI	CCGCGG	1 cut(s)	234
Kzo9I	GATC	3 cut(s)	141, 372, 444
LmnI	GCTCC	4 cut(s)	162, 277, 481, 1036
Lsp1109I	GCAGC	4 cut(s)	156, 159, 166, 1201
LweI	GCATC	2 cut(s)	716, 913
MaeII	ACGT	3 cut(s)	345, 540, 1066
MaeIII	GTNAC	7 cut(s)	18, 307, 524, 536, 541, 955, 1103
MalI	GATC	3 cut(s)	143, 374, 446
MboI	GATC	3 cut(s)	141, 372, 444
MboII	GAAGA	7 cut(s)	310, 313, 316, 382, 808, 958, 1205
MfeI	CAATTG	4 cut(s)	494, 927, 1089, 1146
MflI	RGATCY	1 cut(s)	372
MhlI	GDGCHC	1 cut(s)	478
MlsI	TGGCCA	1 cut(s)	1007
MluCI	AATT	7 cut(s)	379, 494, 632, 826, 927, 1089, 1146
MluNI	TGGCCA	1 cut(s)	1007
Mly113I	GGCGCC	2 cut(s)	70, 81
MlyI	GAGTC	2 cut(s)	14, 479
MmeI	TCCRAC	1 cut(s)	1030
Mox20I	TGGCCA	1 cut(s)	1007
MroNI	GCCGGC	1 cut(s)	105
MscI	TGGCCA	1 cut(s)	1007
MseI	TTAA	1 cut(s)	906
Msp20I	TGGCCA	1 cut(s)	1007
MspA1I	CMGCKG	3 cut(s)	233, 450, 1003
MspCI	CTTAAG	1 cut(s)	905
MspI	CCGG	7 cut(s)	67, 78, 106, 255, 275, 299, 312
MspR9I	CCNGG	3 cut(s)	67, 78, 299
MunI	CAATTG	4 cut(s)	494, 927, 1089, 1146
Mva1269I	GAATGC	1 cut(s)	867
MvnI	CGCG	4 cut(s)	10, 24, 38, 233
MwoI	GCNNNNNNNGC	7 cut(s)	78, 233, 260, 269, 569, 1157, 1214
NaeI	GCCGGC	1 cut(s)	107
NarI	GGCGCC	2 cut(s)	70, 81
NciI	CCSGG	3 cut(s)	67, 78, 299
NdeII	GATC	3 cut(s)	141, 372, 444
NgoMIV	GCCGGC	1 cut(s)	105
NlaIII	CATG	3 cut(s)	331, 808, 1221
NlaIV	GGNNCC	7 cut(s)	45, 71, 82, 118, 477, 894, 1032
NmeAIII	GCCGAG	2 cut(s)	77, 262
NmuCI	GTSAC	5 cut(s)	18, 307, 524, 536, 541
NruI	TCGCGA	1 cut(s)	10
NspV	TTCGAA	1 cut(s)	794
PaqCI	CACCTGC	1 cut(s)	883
PceI	AGGCCT	1 cut(s)	942
PcsI	WCGNNNNNNNCGW	1 cut(s)	285
PctI	GAATGC	1 cut(s)	867
PdiI	GCCGGC	1 cut(s)	107
PfeI	GAWTC	2 cut(s)	208, 248
PkrI	GCNGC	8 cut(s)	156, 171, 174, 229, 232, 235, 565, 1216
PleI	GAGTC	2 cut(s)	13, 479
PluTI	GGCGCC	2 cut(s)	73, 84
PpsI	GAGTC	2 cut(s)	13, 479
PpuMI	RGGWCCY	1 cut(s)	893
Psp5II	RGGWCCY	1 cut(s)	893
PspEI	GGTNACC	1 cut(s)	307
PspFI	CCCAGC	1 cut(s)	450
PspN4I	GGNNCC	7 cut(s)	45, 71, 82, 118, 477, 894, 1032
PspPI	GGNCC	5 cut(s)	43, 117, 453, 460, 893
PspPPI	RGGWCCY	1 cut(s)	893
PsuI	RGATCY	1 cut(s)	372
PvuII	CAGCTG	2 cut(s)	450, 1003
RruI	TCGCGA	1 cut(s)	10
RsaI	GTAC	3 cut(s)	296, 335, 1172
RsaNI	GTAC	3 cut(s)	295, 334, 1171
SacII	CCGCGG	1 cut(s)	234
SaqAI	TTAA	1 cut(s)	906
SatI	GCNGC	8 cut(s)	155, 170, 173, 228, 231, 234, 564, 1215
Sau3AI	GATC	3 cut(s)	141, 372, 444
Sau96I	GGNCC	5 cut(s)	43, 117, 453, 460, 893
SchI	GAGTC	2 cut(s)	14, 479
ScrFI	CCNGG	3 cut(s)	67, 78, 299
SduI	GDGCHC	1 cut(s)	478
SfaNI	GCATC	2 cut(s)	716, 913
SfoI	GGCGCC	2 cut(s)	71, 82
Sfr303I	CCGCGG	1 cut(s)	234
SfuI	TTCGAA	1 cut(s)	794
SgrBI	CCGCGG	1 cut(s)	234
SinI	GGWCC	3 cut(s)	43, 117, 893
SmlI	CTYRAG	4 cut(s)	602, 905, 1019, 1175
SmoI	CTYRAG	4 cut(s)	602, 905, 1019, 1175
Sse9I	AATT	7 cut(s)	379, 494, 632, 826, 927, 1089, 1146
SseBI	AGGCCT	1 cut(s)	942
SspDI	GGCGCC	2 cut(s)	69, 80
StuI	AGGCCT	1 cut(s)	942
StyD4I	CCNGG	3 cut(s)	65, 76, 297
TaaI	ACNGT	5 cut(s)	121, 440, 648, 914, 1138
TaiI	ACGT	3 cut(s)	348, 543, 1069
TaqI	TCGA	5 cut(s)	177, 197, 288, 488, 794
TaqII	GACCGA	1 cut(s)	31
TasI	AATT	7 cut(s)	379, 494, 632, 826, 927, 1089, 1146
TauI	GCSGC	4 cut(s)	230, 233, 236, 566
TfiI	GAWTC	2 cut(s)	208, 248
Tru1I	TTAA	1 cut(s)	906
Tru9I	TTAA	1 cut(s)	906
TscAI	CASTG	1 cut(s)	721
TseFI	GTSAC	5 cut(s)	18, 307, 524, 536, 541
TseI	GCWGC	4 cut(s)	154, 169, 172, 1214
Tsp45I	GTSAC	5 cut(s)	18, 307, 524, 536, 541
TspDTI	ATGAA	3 cut(s)	274, 316, 733
TspGWI	ACGGA	2 cut(s)	149, 153
TspRI	CASTG	1 cut(s)	721
Vha464I	CTTAAG	1 cut(s)	905
VpaK11BI	GGWCC	3 cut(s)	43, 117, 893
XcmI	CCANNNNNNNNNTGG	1 cut(s)	811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.