RLG00000036756

Phosphopantetheine attachment site

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0016811
Physical Location & Seq
Forward (+)
84181676 .. 84189359
7684 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036756

Sequence Viewer

Length: 6924 bp
ATGGACCCTGGAAAATCATTAGAGGATCAGTTCTCCAAGCTGCATCCATGCCTGCCTTTGAACACAAGAATTGGGATAGTAGGCGCTGGTCCAAGTGGTTTGTCAGCTGCTTATGCTCTAGTAAAGCTCGGTTACAGCAATGTGACTGTGTTAGAGAAGTACCATTCTGTTGGTGGCATGTGTGAATCAGTCGATATTGAAGGGAATATTTATGATCTAGGTGGCCAAGTTCTTGCTGCAAACAGTGCCCCTGTCATTTTTCACTTGGCAAAGGAGACTGAATCTGAACTAGAAGAAATGGACTCCCACAAGCTTGCTCTTATTGACAATGCTACAGGAGAGTATGAAGATATAAAAGTTGCAGATGACTATGTATCTGTGATCTCACTGACCTTAGAACTCCAGGATAAAGTAAAGAACTCAGGCCGAATTGGGATCCATGCTCTGAGTGAATTTGCCTCAGACTCGACTTCATCCTATCTTGAACGTCAAGGATTTAGTTCTGTTCCCAAATCTGTGGCTTATGGATATACTGCTTCTGGCTATGGGTATGTTGAAGACATGCCTTATGCTTACATTCATGAGTTCACCCGAACTTCTATGGCTGGAAAAATCCGCCGTTTTAAAGGTGGATATACTAGTCTTTGGAAGAAGATCAGTAAATCACTCCCAATGGTTCACTGCAATACTGAAGTATTGACAGTCAGACGTTATTCTGATTATGTTAGTATCGATGTGAAAAAATGTGACGGAGAAGTCCAAAATATGGAGTTTGATAAGATCATTGTCTCTGGTTCATTTCCTTTGAACTATGGAAGAATTTACAGATCACCTTCACATTCTGCAGAACATAAAACAGAAGTGATGGATATGGGTGATGTTGAAAAGGAGTTGTTCAGTAAAGTACAGACCATTGACTACTACACAACTGTTTTGAAGGTTAAAGGGATAGAGCATATGCCTATAGGTTTCTATTACTTCAGTGAATACATAAGTAATCCTGCAACAATTGGACATCCAGTCGCAATGCAGAGATTCTTTGCTGACACAGATATTTTCTTATTCTGGTCTTACGGAAATTCTGCCGACATTATGGGACCAACTGTGACAGAACTTGCAATTGAAGCTGTTAAACGTATAGGGGGAGAAGTTAAGGAGGTGGTTCTCCAGCGCCAGTTTAAGTATTTCCCTCATGTTGATAGCCAAGCCATGGTGAATGGATTTTATAACAAATTGGAGTCTGAACTTCAAGGCGTGAAGAACACTTATTACGTAGGCGGGCTTATGGCTTTTGAGCTTACAGAGAGAAATTCATCATATGCTATGGCTTTAGTCTGCAAGCACTTTGCAAATGACAATCCTTTGCCAAAGCTCCCATATGTTAAGAGTATGTTTTCTTTCCAAAATGAATTGGAAAGAAGCCCTACAATCTTGGCCGAACTACCAGGAGTGGAGTACCCTAATTTGTCTTCCCTTGATGGCTATCTGAAGCACTGGGGAATTCATAGAGTTACTCAAAACAAGACACTCTATACTTGGATCAATGAAGAAGGGGCAGTTGCTTGCCAGAGGACTTACGCAGAACTTAATGCAAATGCTTCTTGCATTGCTCAAAAGATCTTGACATGCCAGAAACCAGTAATCAAGCCTGGGGATAGGGTCCTCCTGGTCCATGTCCCGGGTCTGGACTTCATAGATGCTTTCTTTGGATGCTTAAGAGCTAAAGTCTTGCCAGTCCCAGTTCTACCTCCAGATCCTTTGCAAAGAGGTGGTCAGGCACTTTTGAAGATTGAAAACATTGCTAAATCATGTAATGCAAAAGCAATTCTGTCCACCATTAGTTATCACTGGGCAGTGCAAGCAGGTTCAGTTAAAAATATGATCTCATTGACTGCTAAGAATCAAAAGTCCTCAGCAAGGTGGCCGAATCTTCCTTGGTTACATACAGATTCTTGGGTTAAGAACTCCAAGAGCGGAGTTGTGGAAGCTCTAAAGGATGAATCTGAATCACAGCCGGGTGATGTATGTTTTCTCCAATTCACATCAGGTTCGACTGGCGATGCTAAAGGAGTCATGATAACTCATGGAGGGCTCATTCATAATGTCAAGTTGATGAGAATGAGATACAAGAGCACCTCAAAAACAGTTCTAGTAAGCTGGCTTCCTCAATACCACGACATGGGGCTGATCGGAGGACTTTTCACAGCTCTTGTTAGTGGTGGGACTGCAGTTTTGTTTTCACCATTGGCATTCATCAGGAATCCACTGTTATGGCTCCAAGTCATGAGCAAATATCAGGCTACTCACAGTGCTGGCCCCAACTTTGCCTTTGAGCTAGTAGTTAGAAGGCTAGAGTCTGACAAGACTAGAAAATATGACCTGTCTTCCATGAAGTTCCTCATGGTTGCTGCTGAACCTGTTAGGCAGAAAACTCTGAAAAGGTTTGTTGATCTGACTCGTCCCTTCGGCTTAACTCAAGAGGTGATGGCACCTGGCTATGGCTTGGCAGAAAACTGTGTGTTTGTCAGTTGTGCATATGGTGAAGGAAAGCCTATCATGGTTGATTGGCAAGGACGAGTATGTTGTGGATATGTGAATCCAAATGATGAAGATGTCGACATCAGAATAGTCGATCCAGAGAGCTGTGAGGAGCTCAAAGAAGCTGGAAAAGAAGGAGAAATATGGATCAGTAGTCCCAGTGCTGGAGTTGGGTATTGGGAAAGAGAAGAGCTAAGCAAGAAAACTTTTAAAAACCAGCTTGCTGACAATCCGGGACGTATCTACACTAGGACTGGGGATTTGGGACGCATAATTGACAGCAAACTCTTCATCACTGGAAGAATCAAAGATCTTATCATTGTTGCAGGAAGGAACATTTACTCAGCAGATGTAGAGAAGACAGTGGAGAATGCATCTGAAGTTGTACGTCCGGGTTGTTGTGCAGTCATTTCTGTTCCAGTGGAAATCCTATCAAAACAAGGAATCTCAGTTCAAGACAACTCTGACCAGGTTGGTTTAGTTGTCATTGCGGAGGTTAGGGATGGAAAACCTGTTGGAAAGGATGTGGTTGAACAAATTCAAGCTCGTGTTGCAGAAGAACATGGGGTCACTGTTGCTACTATCAAGTTGATCAGGCCGAAAACCATTAGTAAAACAACGTCAGGAAAAATCAAAAGATTTGAATGCCTGCAGCAGTTTACTGATGGAACATTGAATATTGTACCAGAGCCACTTTTAACAAAGAGAAGGCTGCTTCGGTCCTTCACTACAGGAACATGCAAGGAGGGAAAAACTCCTCGGCCACACCTTGTGAGAAGCACTCCTCCACCAAGCCCCAAAATAAGCAATAAACAGATTGTGGACTTCTTGAAACGATTAGTTTCCGAGCAGACTGGTATTTCAATCAACAAAATCACTGACACTGAAAGTCTAGTGTCTTATGGAATAGACTCCATTGGGGTGGTCAGAGCTGCTCAGAAACTTTCAGACTTTCTTGGTGTGCCAGTAGGAGCTGTGGACATTTTCACTGCAACCTGCATTGCAGACTTGGCAAGCTTCTCGGAGAATCTTTTAGTAAATGCTGAACCTCAATTGTCCACTGATCCATCCCATGTTGCACAACCTGAGACTGAGACTGATTCTGCTGAGCTTTTGATGGAACTTCCCGAGTCCAATCACTCGATTATCTGGTTATTCCAACTTCTAGCTCTTGTTTACGTTGCTTTCATGCTCTCCCTTCCTGCATATTTATCAGTTTCTACTTTCACAAGTTGTGTCTCAGCCACTCATGCATTGGTAGGAGGAGTTCCCTATCTAGATTATCTGGCCTTGCTGACTTTTGCTCCCCTTGCTTGGATGTCCTGTATACTTTCTACATGTGTTTCAATTGCTTTCTTGGGGAACTCTTTCTTAAAACCAAACCACGCCCTGAACCCTGAAGTCTCCGTCTGGTCAACGGATTTTGTCAAGTGGTGGGCTCTTTACAAGGGTCATGAAGTTGCCTCCAAAGTTTTGGCAGAGCCTCTGCGAGGCACAGTGTTCCTTAAGTATTGGTTTGAGATGCTTGGAGCTAGGATTGGATCCTCAGTTTTACTTGATACAGTTGACATAACAGACCCCTCTCTAGTTTCAATTGGAGATGGAGCTGTGCTTGCAGAAGGTGCTTTGATTCAAGGCCATGAAGTGAAGAATGGAGTGTTGAGCTTCCTCCCAATAAGAATTGGTCAAAACTCCTCAGTTGGCCCTTACGCTGTTGTCCAGAAGGGAACAATATTGGCAGAAGACAGTGAGCTGATGGCCTTACAAAAAGGTGGAGGCAAGTCTGTTATCAAGGCTAAAAATCTTCAGAATGGGCTGGCGAAGGTCACAAGCACTGAAACGGAGGCCATTTACCAGTTCTTAGGCATCTATTTGGTTGGGTTCCTCGGCACTCTCTCAGCTTCCATTGTGTATTTAGCCTACATTTGGCTGTCTCAAAAGCCTCCTTCGGTTGAAGAATATGCGTTCTTTTGCTTATTTGGGGCCTTTCACTGGATACCTTACACCATCATAGCATATGCTACCATGTTTGCTAATGTTCCATCAGACATAATTTACTTCTCCATCTCAGTAGCTGTTGGTTACTTAGCTTATGGCGTAGTACTCAGCTTCGTCACAAGTGCTTTGACTCGTCTTATTTCTAGTAAACAGACAAAGTCAGGCCATCTCAGAACTTGGTTTTGCCACCGAATCACCATTGGTTGCCACCTTAGATTTGCTAAGCTTCTGTCAGGAACAGAAGCCTTCTGCATCTACTTGCGCCTTCTGGGTGCAAAGGTTGGAAAACATTGTTCTATCAGGGCCATCAATCCAGTTTCAGACCCGAAATTGTTATCACTTGGTTCTGGTGTCCATCTTGGTGATTTCAGTCGGATTATTGCTGGGTTTTATTCCTCCAATGGGTTTGTTAGCGGAAAAATTGAGGTGCAAGATAATGCAGTAATTGGGAGCGAAAGCGTTGTTCTTCCTGGTTCAGTTATTCAGAAAGATGTTATTCTTGGTGCACTTTCAGTTGCACCAGTGAACTCAACGCTCCAGGCTGGTGGTGTTTACATTGGTTCTCACACACCAATCATGATCAAGAACACCATGCATTCGTTGGATGACCGAATAGAAGAGATGGACATGAAATATAAGAAAATAGTTGGTAACCTTGCTGCAAATTTGGCTGCCACAACTCTGAAGGTCAAATCAAGATACTTCCATAGAATTGGTGTTAGTGGGAAGGGATACTTGAAGATTTATGACAACATCAAAGGCTTGCCACACCATAACATTTTCTCTCCTGGCAAGAGCTATCCTGTTATAGTCCGGCACAGCAACAGCTTGAGTGCTGATGATGATGCAAGGATTGATGCACGCGGTGCAGCCATCCGAATACTTCAAGGTGAGACTAGTGAGTCCTCACTCCTTGACCTGACACTGAAGACAGGAAAGGCATTCTATGCCCGCACAATTGCAGACTTTGCAACATGGTTAGTGTGTGGACTTCCTGCAAGGGAAGAGTATGTCAAGCGAGCCCCGCATGTACGCGATGCAGTGTGGACTTCCCTTCGCCATGCAAACTCGTTCACTGAGCTACATTACTACTCAAACATCTGCAGGCTGTTCCGGTTCACAGATGGACAGGAAATGTATGTCAAGTTCAAGTTGAGGCCTTCCAATGAGAACATTAGTGAAGAATCTGGTAAGGTAGAACCTATTGGCATTCTTCCACCTGATACAGGTGCAATTCCTAGAGATGAGAAGGATACTCGCCCTCTACTTTTCCTTGCCAAAGATTTCCAAAGCCGGGTCAATGAAACTGGAGTTCGTTATATATTCCAGTTACAGGTCAGGCCTGTTCCACAGGATGAAGCTACCCGAGACATTGCACTTGACTGCACCAAACCCTGGAATGAGGCTGAGTTCCCATACATTGACGTTGGAGAGATTAACATCAACCACAATATATCTGCAGAAGAATCGGAACAGCTGAATTTCAATCCTTTTGTTAAATGCCAAGAAATAGATGTCATCAGGGCTTCATCATGCTCCCAGAGTGCTTCGATTGACCATGGCCGTTCACTGATCTATGAGATTTGCCAGCACTTACGCAATGGTGAACCCCTGCCAGAGGCTTGGAAAATCTTTGTAGAGCAGTCTGATGTCAAAGTAGACCTTTCTGGTTGTCCAATGGCAGCAGCATTGCAGAAAAAAGATTCACATATCGTGACACTGGAAAGAACTGCCTTTCAGACTCTATGGGCAACTTTTGCGCAACCTTTTCTGCAAACAGTGTTCCCTCATTTCCTCCTCGCGTTATTGATCTTCTATCCTTTGAGCTTGGCTCTTCACTTGAAGAATGTGCAGAAACTCCCTCTGCATTGGTTGTTCCCCTTGTTTTGGGTTTGTTCAGGATCTTTGGCTGGGTTAGCTTGTGTTGTTGCAAAATGGGTACTAGTAGGAAAGAAGAAAGAAGGTGAAGCCATACACATGTGGAGCCTAGGGGTTTTTTTGGACACTACATGGCAAGCCTTTAGAACCCTAGTTGGGAGCTACTTCATGGAAATGACAAGCGGGTCAGTTCTCTTTGTGTTGTGGATGAGGCTGATGGGTTCAGAGATTGAGTTGGACCAAGGTGTTTATGTGGACAGCATGGGAGCTTTGCTCAACCCTGAAATGGTGGAGATTGAGAGAGGTGGGTGTGTGGGAAGAGAAGCTCTCTTGTTTGGTCACATTTATGAAGGGGACGGGGGCAAGGTTAAGTTCGGAAAGATTACAATTGAAGAAGGTGGATTTGTAGGGAGTAGAGCAATAGCAATGCCAGGAGTGATAGTGGAGAGTGGAGGCAGTCTTAGTGCTCTCTCTCTTGCCATGAAAGAAGAAATTATCAAGTCAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AMP-binding Amino_oxidase Catalase Hexapep NAD_binding_8 PP-binding

Protein Analysis

2308

Amino Acids

254.5

Weight (kDa)

6.65

Isoelectric Point (pI)

37.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_8 PF13450 26 - 92 5.6e-13 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 32 - 280 1.3e-15 Flavin containing amine oxidoreductase
AMP-binding PF00501 522 - 906 2.6e-59 AMP-binding enzyme
AMP-dom_DIP2-like PF23024 950 - 1073 9.8e-07 Disco-interacting protein 2-like, AMP domain
PP-binding PF00550 1122 - 1185 1.8e-10 Phosphopantetheine attachment site
Catalase PF00199 1741 - 2012 1.2e-07 Catalase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016811)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43570
malus_domestica MD03G1020900.v1.1 MD11G1022500.v1.1
prunus_persica Prupe.6G018300_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0078141
rosa_laevigata RLG00000036756
rosa_multiflora Rmu_sc0019972.1_g000001
rosa_roxburghii Rroxscaffold_1G00004000
rosa_rugosa Rorug05G0458900
rosa_samantha Rh5AG513500 Rh5BG536500 Rh5CG559900 Rh5DG548000
rosa_wichuraiana Rw5G047620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1227
AasI GACNNNNNNGTC 3 cut(s) 755, 5437, 6598
Acc16I TGCGCA 1 cut(s) 6297
Acc36I ACCTGC 2 cut(s) 1853, 3542
AccB1I GGYRCC 1 cut(s) 2488
AccB7I CCANNNNNTGG 4 cut(s) 766, 1210, 2179, 5931
AccBSI CCGCTC 1 cut(s) 1974
AccI GTMKAC 3 cut(s) 2616, 3865, 6195
AccII CGCG 3 cut(s) 5400, 5571, 6338
AciI CCGC 9 cut(s) 616, 1278, 1974, 3029, 4950, 5400, 5488, 5561, 6597
AcoI YGGCCR 5 cut(s) 223, 1434, 1922, 3299, 6097
AcsI RAATTY 8 cut(s) 452, 819, 1078, 1309, 1500, 3075, 5200, 6016
AcuI CTGAAG 8 cut(s) 711, 964, 1508, 2937, 3957, 4328, 5240, 5483
AdeI CACNNNGTG 2 cut(s) 3310, 5402
AfaI GTAC 8 cut(s) 161, 906, 1457, 2925, 3222, 4641, 5568, 6477
AflII CTTAAG 2 cut(s) 1714, 4043
AflIII ACRYGT 2 cut(s) 3875, 6513
AhdI GACNNNNNGTC 1 cut(s) 1019
AhlI ACTAGT 3 cut(s) 638, 5432, 6478
AloI GAACNNNNNNTCC 2 cut(s) 2973, 3005
Alw21I GWGCWC 4 cut(s) 2135, 2655, 5044, 6883
Alw26I GTCTC 9 cut(s) 269, 793, 3620, 3626, 3781, 3946, 4476, 5423, 5898
Alw44I GTGCAC 1 cut(s) 5040
AlwNI CAGNNNCTG 1 cut(s) 4613
Ama87I CYCGRG 3 cut(s) 1678, 3665, 5901
ApaLI GTGCAC 1 cut(s) 5040
ApoI RAATTY 8 cut(s) 452, 819, 1078, 1309, 1500, 3075, 5200, 6016
ArsI GACNNNNNNTTYG 6 cut(s) 1756, 1788, 2215, 2247, 2782, 2814
Asp700I GAANNNNTTC 2 cut(s) 3075, 3905
AspA2I CCTAGG 1 cut(s) 6523
AspLEI GCGC 4 cut(s) 86, 1173, 4800, 6298
AsuC2I CCSGG 6 cut(s) 1679, 1680, 2016, 2772, 2931, 5831
AvaI CYCGRG 3 cut(s) 1678, 3665, 5901
AvaII GGWCC 7 cut(s) 4, 89, 1097, 1660, 1669, 3258, 6652
AvrII CCTAGG 1 cut(s) 6523
BaeGI GKGCMC 2 cut(s) 250, 5044
BalI TGGCCA 1 cut(s) 225
BamHI GGATCC 2 cut(s) 435, 4079
BanI GGYRCC 1 cut(s) 2488
BanII GRGCYC 4 cut(s) 2094, 2655, 3979, 5560
BarI GAAGNNNNNNTAC 2 cut(s) 2145, 2177
BauI CACGAG 1 cut(s) 3084
BbsI GAAGAC 6 cut(s) 564, 1461, 2376, 2903, 4287, 5471
Bbv12I GWGCWC 4 cut(s) 2135, 2655, 5044, 6883
BbvCI CCTCAGC 1 cut(s) 1912
BceAI ACGGC 2 cut(s) 603, 6084
BcgI CGANNNNNNTGC 4 cut(s) 3540, 3574, 5985, 6019
BciVI GTATCC 3 cut(s) 4527, 5261, 5782
BclI TGATCA 2 cut(s) 3129, 5115
BcnI CCSGG 6 cut(s) 1679, 1680, 2016, 2772, 2931, 5831
BcoDI GTCTC 9 cut(s) 269, 793, 3620, 3626, 3781, 3946, 4476, 5423, 5898
BcuI ACTAGT 3 cut(s) 638, 5432, 6478
BfmI CTRYAG 8 cut(s) 333, 843, 963, 2226, 3188, 3267, 5638, 5994
BfoI RGCGCY 2 cut(s) 87, 1174
BfrI CTTAAG 2 cut(s) 1714, 4043
BfuAI ACCTGC 2 cut(s) 1853, 3542
BfuI GTATCC 3 cut(s) 4527, 5261, 5782
BglII AGATCT 2 cut(s) 1617, 2848
BlnI CCTAGG 1 cut(s) 6523
BlpI GCTNAGC 3 cut(s) 2732, 3645, 4758
BmcAI AGTACT 1 cut(s) 4641
Bme18I GGWCC 7 cut(s) 4, 89, 1097, 1660, 1669, 3258, 6652
BmeRI GACNNNNNGTC 1 cut(s) 1019
BmeT110I CYCGRG 3 cut(s) 1678, 3665, 5901
BmrI ACTGGG 5 cut(s) 1504, 1733, 1858, 2691, 2802
BmuI ACTGGG 5 cut(s) 1504, 1733, 1858, 2691, 2802
BpiI GAAGAC 6 cut(s) 564, 1461, 2376, 2903, 4287, 5471
BplI GAGNNNNNCTC 8 cut(s) 3304, 3336, 6352, 6384, 6672, 6704, 6726, 6758
BpmI CTGGAG 6 cut(s) 386, 1151, 1734, 2724, 5057, 5865
Bpu10I CCTNAGC 1 cut(s) 1912
Bpu1102I GCTNAGC 3 cut(s) 2732, 3645, 4758
BpuEI CTTGAG 2 cut(s) 2460, 5386
BpuMI CCSGG 6 cut(s) 1679, 1680, 2016, 2772, 2931, 5831
Bsa29I ATCGAT 1 cut(s) 732
BsaAI YACGTR 1 cut(s) 1273
BsaBI GATNNNNATC 2 cut(s) 1482, 5975
BsaWI WCCGGW 1 cut(s) 5649
BsaXI ACNNNNNCTCC 4 cut(s) 3826, 3856, 6840, 6870
Bse8I GATNNNNATC 2 cut(s) 1482, 5975
BseCI ATCGAT 1 cut(s) 732
BseJI GATNNNNATC 2 cut(s) 1482, 5975
BseRI GAGGAG 6 cut(s) 2663, 3285, 3312, 3816, 4222, 6323
BseSI GKGCMC 2 cut(s) 250, 5044
BseYI CCCAGC 2 cut(s) 4919, 6446
BsgI GTGCAG 4 cut(s) 2961, 5424, 5905, 6407
Bsh1236I CGCG 3 cut(s) 5400, 5571, 6338
BshNI GGYRCC 1 cut(s) 2488
BshVI ATCGAT 1 cut(s) 732
BsiHKAI GWGCWC 4 cut(s) 2135, 2655, 5044, 6883
BsiHKCI CYCGRG 3 cut(s) 1678, 3665, 5901
BsiSI CCGG 7 cut(s) 1679, 2015, 2771, 2930, 5350, 5650, 5830
BslFI GGGAC 9 cut(s) 1110, 1661, 1721, 2236, 2445, 2679, 2787, 2817, 6782
BsmAI GTCTC 9 cut(s) 269, 793, 3620, 3626, 3781, 3946, 4476, 5423, 5898
BsmFI GGGAC 9 cut(s) 1110, 1661, 1721, 2236, 2445, 2679, 2787, 2817, 6782
BsmI GAATGC 6 cut(s) 2249, 2914, 3188, 5131, 5477, 5745
BsoBI CYCGRG 3 cut(s) 1678, 3665, 5901
Bsp1286I GDGCHC 8 cut(s) 250, 2094, 2135, 2655, 3979, 5044, 5560, 6883
Bsp1720I GCTNAGC 3 cut(s) 2732, 3645, 4758
Bsp19I CCATGG 2 cut(s) 1209, 6094
BspACI CCGC 9 cut(s) 616, 1278, 1974, 3029, 4950, 5400, 5488, 5561, 6597
BspDI ATCGAT 1 cut(s) 732
BspFNI CGCG 3 cut(s) 5400, 5571, 6338
BspHI TCATGA 5 cut(s) 580, 2073, 2283, 3991, 5112
BspMAI CTGCAG 5 cut(s) 847, 2230, 3192, 5642, 5998
BspMI ACCTGC 2 cut(s) 1853, 3542
BspQI GCTCTTC 2 cut(s) 2721, 6375
BspT107I GGYRCC 1 cut(s) 2488
BspTI CTTAAG 2 cut(s) 1714, 4043
BsrBI CCGCTC 1 cut(s) 1974
BssNAI GTATAC 1 cut(s) 3866
BssSI CACGAG 1 cut(s) 3084
BssT1I CCWWGG 5 cut(s) 1209, 1934, 6094, 6523, 6655
Bst1107I GTATAC 1 cut(s) 3866
Bst2BI CACGAG 1 cut(s) 3084
Bst6I CTCTTC 6 cut(s) 2721, 2831, 5148, 5535, 6375, 6727
BstAFI CTTAAG 2 cut(s) 1714, 4043
BstAPI GCANNNNNTGC 6 cut(s) 245, 4160, 5402, 5483, 5504, 6293
BstBAI YACGTR 1 cut(s) 1273
BstDSI CCRYGG 2 cut(s) 1209, 6094
BstEII GGTNACC 1 cut(s) 5186
BstENI CCTNNNNNAGG 4 cut(s) 1915, 4026, 5760, 6152
BstFNI CGCG 3 cut(s) 5400, 5571, 6338
BstH2I RGCGCY 2 cut(s) 87, 1174
BstHHI GCGC 4 cut(s) 86, 1173, 4800, 6298
BstMAI GTCTC 9 cut(s) 269, 793, 3620, 3626, 3781, 3946, 4476, 5423, 5898
BstNSI RCATGY 7 cut(s) 181, 565, 1629, 3279, 3879, 5567, 6517
BstPI GGTNACC 1 cut(s) 5186
BstSFI CTRYAG 8 cut(s) 333, 843, 963, 2226, 3188, 3267, 5638, 5994
BstSLI GKGCMC 2 cut(s) 250, 5044
BstSNI TACGTA 1 cut(s) 1273
BstUI CGCG 3 cut(s) 5400, 5571, 6338
BstV2I GAAGAC 6 cut(s) 564, 1461, 2376, 2903, 4287, 5471
BstX2I RGATCY 6 cut(s) 435, 1617, 1753, 2848, 4079, 6437
BstXI CCANNNNNNTGG 8 cut(s) 170, 517, 2271, 3460, 4012, 5081, 5249, 6159
BstYI RGATCY 6 cut(s) 435, 1617, 1753, 2848, 4079, 6437
BstZ17I GTATAC 1 cut(s) 3866
Bsu15I ATCGAT 1 cut(s) 732
BsuI GTATCC 3 cut(s) 4527, 5261, 5782
BsuTUI ATCGAT 1 cut(s) 732
BtgI CCRYGG 2 cut(s) 1209, 6094
BtgZI GCGATG 2 cut(s) 2073, 5586
BtsI GCAGTG 4 cut(s) 679, 1860, 3525, 5583
BveI ACCTGC 2 cut(s) 1853, 3542
CaiI CAGNNNCTG 1 cut(s) 4613
CciI TCATGA 5 cut(s) 580, 2073, 2283, 3991, 5112
CfoI GCGC 4 cut(s) 86, 1173, 4800, 6298
Cfr9I CCCGGG 1 cut(s) 1678
ClaI ATCGAT 1 cut(s) 732
CseI GACGC 1 cut(s) 2814
CsiI ACCWGGT 1 cut(s) 3006
Csp6I GTAC 8 cut(s) 160, 905, 1456, 2924, 3221, 4640, 5567, 6476
CviQI GTAC 8 cut(s) 160, 905, 1456, 2924, 3221, 4640, 5567, 6476
DraI TTTAAA 2 cut(s) 625, 2749
DraIII CACNNNGTG 2 cut(s) 3310, 5402
DrdI GACNNNNNNGTC 3 cut(s) 755, 5437, 6598
DriI GACNNNNNGTC 1 cut(s) 1019
DseDI GACNNNNNNGTC 3 cut(s) 755, 5437, 6598
EaeI YGGCCR 5 cut(s) 223, 1434, 1922, 3299, 6097
Eam1104I CTCTTC 6 cut(s) 2721, 2831, 5148, 5535, 6375, 6727
Eam1105I GACNNNNNGTC 1 cut(s) 1019
EarI CTCTTC 6 cut(s) 2721, 2831, 5148, 5535, 6375, 6727
EciI GGCGGA 1 cut(s) 605
Ecl136II GAGCTC 1 cut(s) 2653
Eco105I TACGTA 1 cut(s) 1273
Eco130I CCWWGG 5 cut(s) 1209, 1934, 6094, 6523, 6655
Eco147I AGGCCT 2 cut(s) 5695, 5878
Eco24I GRGCYC 4 cut(s) 2094, 2655, 3979, 5560
Eco47I GGWCC 7 cut(s) 4, 89, 1097, 1660, 1669, 3258, 6652
Eco53kI GAGCTC 1 cut(s) 2653
Eco57I CTGAAG 8 cut(s) 711, 964, 1508, 2937, 3957, 4328, 5240, 5483
Eco88I CYCGRG 3 cut(s) 1678, 3665, 5901
Eco91I GGTNACC 1 cut(s) 5186
EcoICRI GAGCTC 1 cut(s) 2653
EcoNI CCTNNNNNAGG 4 cut(s) 1915, 4026, 5760, 6152
EcoO109I RGGNCCY 2 cut(s) 1660, 4521
EcoO65I GGTNACC 1 cut(s) 5186
EcoRI GAATTC 1 cut(s) 1500
EcoT14I CCWWGG 5 cut(s) 1209, 1934, 6094, 6523, 6655
EcoT22I ATGCAT 3 cut(s) 2914, 3793, 5133
EcoT38I GRGCYC 4 cut(s) 2094, 2655, 3979, 5560
ErhI CCWWGG 5 cut(s) 1209, 1934, 6094, 6523, 6655
FalI AAGNNNNNCTT 4 cut(s) 5255, 5287, 6183, 6215
FaqI GGGAC 9 cut(s) 1110, 1661, 1721, 2236, 2445, 2679, 2787, 2817, 6782
FauI CCCGC 4 cut(s) 1271, 5495, 5568, 6590
FauNDI CATATG 5 cut(s) 957, 1318, 1378, 2536, 4555
FbaI TGATCA 2 cut(s) 3129, 5115
FblI GTMKAC 3 cut(s) 2616, 3865, 6195
FriOI GRGCYC 4 cut(s) 2094, 2655, 3979, 5560
FspI TGCGCA 1 cut(s) 6297
GlaI GCGC 4 cut(s) 85, 1172, 4799, 6297
GsaI CCCAGC 2 cut(s) 4923, 6450
GsuI CTGGAG 6 cut(s) 386, 1151, 1734, 2724, 5057, 5865
HaeII RGCGCY 2 cut(s) 87, 1174
HapII CCGG 7 cut(s) 1679, 2015, 2771, 2930, 5350, 5650, 5830
HgaI GACGC 1 cut(s) 2814
HhaI GCGC 4 cut(s) 86, 1173, 4800, 6298
Hin6I GCGC 4 cut(s) 84, 1171, 4798, 6296
HinP1I GCGC 4 cut(s) 84, 1171, 4798, 6296
HincII GTYRAC 3 cut(s) 2617, 3954, 4105
HindII GTYRAC 3 cut(s) 2617, 3954, 4105
HindIII AAGCTT 3 cut(s) 311, 3553, 4760
HpaII CCGG 7 cut(s) 1679, 2015, 2771, 2930, 5350, 5650, 5830
HpyCH4IV ACGT 9 cut(s) 487, 709, 1135, 1272, 2776, 2926, 3158, 3717, 5961
HpySE526I ACGT 9 cut(s) 487, 709, 1135, 1272, 2776, 2926, 3158, 3717, 5961
HspAI GCGC 4 cut(s) 84, 1171, 4798, 6296
Ksp22I TGATCA 2 cut(s) 3129, 5115
LguI GCTCTTC 2 cut(s) 2721, 6375
MabI ACCWGGT 1 cut(s) 3006
MaeII ACGT 9 cut(s) 487, 709, 1135, 1272, 2776, 2926, 3158, 3717, 5961
MbiI CCGCTC 1 cut(s) 1974
MfeI CAATTG 7 cut(s) 1008, 1119, 3590, 3885, 4131, 5493, 6801
MflI RGATCY 6 cut(s) 435, 1617, 1753, 2848, 4079, 6437
MhlI GDGCHC 8 cut(s) 250, 2094, 2135, 2655, 3979, 5044, 5560, 6883
MlsI TGGCCA 1 cut(s) 225
MluNI TGGCCA 1 cut(s) 225
MmeI TCCRAC 7 cut(s) 3034, 3721, 4798, 4889, 5118, 5944, 6630
Mox20I TGGCCA 1 cut(s) 225
Mph1103I ATGCAT 3 cut(s) 2914, 3793, 5133
MroXI GAANNNNTTC 2 cut(s) 3075, 3905
MscI TGGCCA 1 cut(s) 225
MslI CAYNNNNRTG 6 cut(s) 2269, 3458, 4896, 6512, 6587, 6759
Msp20I TGGCCA 1 cut(s) 225
MspA1I CMGCKG 2 cut(s) 107, 6013
MspCI CTTAAG 2 cut(s) 1714, 4043
MspI CCGG 7 cut(s) 1679, 2015, 2771, 2930, 5350, 5650, 5830
MunI CAATTG 7 cut(s) 1008, 1119, 3590, 3885, 4131, 5493, 6801
Mva1269I GAATGC 6 cut(s) 2249, 2914, 3188, 5131, 5477, 5745
MvnI CGCG 3 cut(s) 5400, 5571, 6338
NciI CCSGG 6 cut(s) 1679, 1680, 2016, 2772, 2931, 5831
NcoI CCATGG 2 cut(s) 1209, 6094
NdeI CATATG 5 cut(s) 957, 1318, 1378, 2536, 4555
NmeAIII GCCGAG 2 cut(s) 3277, 4404
NmuCI GTSAC 8 cut(s) 142, 746, 1105, 3106, 4363, 4651, 6250, 6752
NsbI TGCGCA 1 cut(s) 6297
NsiI ATGCAT 3 cut(s) 2914, 3793, 5133
NspI RCATGY 7 cut(s) 181, 565, 1629, 3279, 3879, 5567, 6517
PagI TCATGA 5 cut(s) 580, 2073, 2283, 3991, 5112
PceI AGGCCT 2 cut(s) 5695, 5878
PciI ACATGT 2 cut(s) 3875, 6513
PciSI GCTCTTC 2 cut(s) 2721, 6375
PctI GAATGC 6 cut(s) 2249, 2914, 3188, 5131, 5477, 5745
PdmI GAANNNNTTC 2 cut(s) 3075, 3905
PflFI GACNNNGTC 1 cut(s) 4693
PflMI CCANNNNNTGG 4 cut(s) 766, 1210, 2179, 5931
PfoI TCCNGGA 2 cut(s) 402, 2770
Ppu21I YACGTR 1 cut(s) 1273
PpuMI RGGWCCY 1 cut(s) 1660
PscI ACATGT 2 cut(s) 3875, 6513
PsiI TTATAA 1 cut(s) 1227
Psp124BI GAGCTC 1 cut(s) 2655
Psp5II RGGWCCY 1 cut(s) 1660
PspEI GGTNACC 1 cut(s) 5186
PspFI CCCAGC 2 cut(s) 4919, 6446
PspPPI RGGWCCY 1 cut(s) 1660
PsrI GAACNNNNNNTAC 6 cut(s) 1253, 1285, 3789, 3821, 5666, 5698
PstI CTGCAG 5 cut(s) 847, 2230, 3192, 5642, 5998
PstNI CAGNNNCTG 1 cut(s) 4613
PsuI RGATCY 6 cut(s) 435, 1617, 1753, 2848, 4079, 6437
PsyI GACNNNGTC 1 cut(s) 4693
PvuII CAGCTG 2 cut(s) 107, 6013
RsaI GTAC 8 cut(s) 161, 906, 1457, 2925, 3222, 4641, 5568, 6477
RsaNI GTAC 8 cut(s) 160, 905, 1456, 2924, 3221, 4640, 5567, 6476
RseI CAYNNNNRTG 6 cut(s) 2269, 3458, 4896, 6512, 6587, 6759
SacI GAGCTC 1 cut(s) 2655
SalI GTCGAC 1 cut(s) 2615
SapI GCTCTTC 2 cut(s) 2721, 6375
ScaI AGTACT 1 cut(s) 4641
SduI GDGCHC 8 cut(s) 250, 2094, 2135, 2655, 3979, 5044, 5560, 6883
SexAI ACCWGGT 1 cut(s) 3006
SfcI CTRYAG 8 cut(s) 333, 843, 963, 2226, 3188, 3267, 5638, 5994
SinI GGWCC 7 cut(s) 4, 89, 1097, 1660, 1669, 3258, 6652
SmaI CCCGGG 1 cut(s) 1680
SmiMI CAYNNNNRTG 6 cut(s) 2269, 3458, 4896, 6512, 6587, 6759
SmlI CTYRAG 4 cut(s) 1714, 2475, 4043, 5365
SmoI CTYRAG 4 cut(s) 1714, 2475, 4043, 5365
SnaBI TACGTA 1 cut(s) 1273
SpeI ACTAGT 3 cut(s) 638, 5432, 6478
SseBI AGGCCT 2 cut(s) 5695, 5878
SsiI CCGC 9 cut(s) 616, 1278, 1974, 3029, 4950, 5400, 5488, 5561, 6597
SspI AATATT 3 cut(s) 208, 3217, 4272
SstI GAGCTC 1 cut(s) 2655
StuI AGGCCT 2 cut(s) 5695, 5878
StyI CCWWGG 5 cut(s) 1209, 1934, 6094, 6523, 6655
TaiI ACGT 9 cut(s) 490, 712, 1138, 1275, 2779, 2929, 3161, 3720, 5964
TaqI TCGA 8 cut(s) 192, 467, 732, 2051, 2616, 2631, 3680, 6086
TaqII GACCGA 2 cut(s) 3246, 5160
TatI WGTACW 2 cut(s) 904, 4639
TseFI GTSAC 8 cut(s) 142, 746, 1105, 3106, 4363, 4651, 6250, 6752
Tsp45I GTSAC 8 cut(s) 142, 746, 1105, 3106, 4363, 4651, 6250, 6752
TspGWI ACGGA 5 cut(s) 765, 1089, 3934, 3971, 4394
TspMI CCCGGG 1 cut(s) 1678
Tth111I GACNNNGTC 1 cut(s) 4693
Van91I CCANNNNNTGG 4 cut(s) 766, 1210, 2179, 5931
Vha464I CTTAAG 2 cut(s) 1714, 4043
VneI GTGCAC 1 cut(s) 5040
VpaK11BI GGWCC 7 cut(s) 4, 89, 1097, 1660, 1669, 3258, 6652
XagI CCTNNNNNAGG 4 cut(s) 1915, 4026, 5760, 6152
XapI RAATTY 8 cut(s) 452, 819, 1078, 1309, 1500, 3075, 5200, 6016
XbaI TCTAGA 1 cut(s) 3814
XceI RCATGY 7 cut(s) 181, 565, 1629, 3279, 3879, 5567, 6517
XcmI CCANNNNNNNNNTGG 3 cut(s) 170, 3790, 5134
XmaI CCCGGG 1 cut(s) 1678
XmaJI CCTAGG 1 cut(s) 6523
XmiI GTMKAC 3 cut(s) 2616, 3865, 6195
XmnI GAANNNNTTC 2 cut(s) 3075, 3905
ZrmI AGTACT 1 cut(s) 4641
Zsp2I ATGCAT 3 cut(s) 2914, 3793, 5133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.